BLASTX nr result
ID: Atropa21_contig00011462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00011462
(1024 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 78 6e-19
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 69 4e-17
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 78 8e-14
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 58 2e-13
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 53 9e-12
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 55 3e-11
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 51 7e-08
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 63 2e-07
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 58 7e-06
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 78.2 bits (191), Expect(2) = 6e-19
Identities = 46/93 (49%), Positives = 60/93 (64%)
Frame = +3
Query: 732 KVIWKP*NSE*AKVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEV 911
KVIWK ++ K+ TD PRRSS FC+R DI+ AQA+EI TNTQ E
Sbjct: 3170 KVIWKAPDTGQIKIKTD------PRRSSWVFCVRDEQGDILQAQAQEIGELACTNTQAEA 3223
Query: 912 MAIQ*ALKYIETLQVDKILIKTDFLLLKNIMER 1010
MAI ALK+IE Q+D+++IKTD LL NI+++
Sbjct: 3224 MAILQALKFIEATQMDRVVIKTDSLLTNNIVDK 3256
Score = 43.5 bits (101), Expect(2) = 6e-19
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 592 KVSTTKLIYQIMHTLVFFKKVRRNNFKHASYRWNTVVEALNRYN 723
++S+++LI+QI+ K RR + KH Y W VVEALN YN
Sbjct: 3120 EMSSSRLIFQIIAYSGLLIKTRRRSRKHVPYNWRIVVEALNNYN 3163
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 68.9 bits (167), Expect(2) = 4e-17
Identities = 40/93 (43%), Positives = 57/93 (61%)
Frame = +3
Query: 732 KVIWKP*NSE*AKVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEV 911
+V WKP + K NTDGA RGNP SS FC+R D+I A+AK I +TN + E
Sbjct: 697 RVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGI--GIATNMEAET 754
Query: 912 MAIQ*ALKYIETLQVDKILIKTDFLLLKNIMER 1010
+AI AL+ ++ K++I+TD L LK I+++
Sbjct: 755 VAILTALRECSNRKMQKVIIETDSLSLKKIIQQ 787
Score = 46.6 bits (109), Expect(2) = 4e-17
Identities = 20/78 (25%), Positives = 44/78 (56%)
Frame = +1
Query: 487 WKIHAQHQVRYMFQMVPSIIV*EL*KRRNTLRHGGKVSTTKLIYQIMHTLVFFKKVRRNN 666
WK A +++ +++ +P+II+ L KRRN L+H +S +++ ++ + K +
Sbjct: 612 WKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSISWERMVEMVIEVVRKMVKSQFPW 671
Query: 667 FKHASYRWNTVVEALNRY 720
K+ + W +++ LN+Y
Sbjct: 672 IKNMRWTWQAIIQRLNQY 689
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 77.8 bits (190), Expect(2) = 8e-14
Identities = 42/92 (45%), Positives = 61/92 (66%)
Frame = +3
Query: 732 KVIWKP*NSE*AKVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEV 911
K+IW P NS K NTDGAS+GNP +SS +C+R ++I AQA+EI +TN + E
Sbjct: 731 KIIWMPPNSNTRKCNTDGASKGNPGKSSYAYCLRDQEGNLIYAQAEEIP--ETTNVEAEA 788
Query: 912 MAIQ*ALKYIETLQVDKILIKTDFLLLKNIME 1007
+AI+ A+ + T ++ I+TD LLLKNI++
Sbjct: 789 VAIKEAIYHCTTRGFSRVTIETDSLLLKNILQ 820
Score = 26.6 bits (57), Expect(2) = 8e-14
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 589 GKVSTTKLIYQIMHTLVFFKKVRRNNFKHASYRWNTVVEALNRYNP 726
G ++ KL+YQ+ + F + + K W+ +V+ L Y P
Sbjct: 680 GNMTYNKLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKP 725
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 57.8 bits (138), Expect(2) = 2e-13
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = +3
Query: 735 VIWKP*NSE*AKVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEVM 914
V W+ + NTDGAS+GNPR SS +C+R N D++ A+A I +TN + E
Sbjct: 669 VRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLLYAEAHNI--GETTNMEAEAT 726
Query: 915 AIQ*ALKYIETLQVDKILIKTDFLLLKNIMER 1010
+ AL++ + K+ ++TD L L+N++ R
Sbjct: 727 TVWKALQFCYENGLRKVRLETDSLALQNMITR 758
Score = 45.1 bits (105), Expect(2) = 2e-13
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 487 WKIHAQHQVRYMFQMVPSIIV*EL*KRRNTLRHGGKVSTTKLIYQIMHTLVFFKKVRRNN 666
W A +++ + + V ++I+ EL KRRN+ RHG + + + YQ L ++
Sbjct: 583 WDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTYNNMYYQCQLILYQLVTIKFPW 642
Query: 667 FKHASYRWNTVVEALNRYNP 726
K +Y W VV L Y P
Sbjct: 643 IKGLTYHWPQVVGMLQNYKP 662
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 53.1 bits (126), Expect(2) = 9e-12
Identities = 31/95 (32%), Positives = 55/95 (57%)
Frame = +3
Query: 735 VIWKP*NSE*AKVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEVM 914
+ W P N K NTD AS+GNPR S+ FC+R N + I ++E+ T+ + EV+
Sbjct: 129 IYWVPPNMGVYKCNTDCASKGNPRPSAGGFCIRNWNGEFIYTTSQEL--GFKTSLEAEVI 186
Query: 915 AIQ*ALKYIETLQVDKILIKTDFLLLKNIMERI*E 1019
A + L++ + + ++++TD L++ I++ I E
Sbjct: 187 AFERGLQFCMSHNLLPVILETDSLIVSKILDGIWE 221
Score = 44.3 bits (103), Expect(2) = 9e-12
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +1
Query: 487 WKIHAQHQVRYMFQMVPSIIV*EL*KRRNTLRHGGKVSTTKLIYQIMHTLVFFKKVRRNN 666
W + ++R +F +P I+ E K RNT++HGGK+S ++ +I + VR
Sbjct: 43 WNANCSAKLRPLFNAIPGFILWESWKGRNTVKHGGKISRYNMLAEITRNIHNLAMVRYPW 102
Query: 667 FKHASYRWNTVVEALNRYNPVV 732
++ W+ +V+ Y V+
Sbjct: 103 LRNIPKDWSMMVKFFENYISVL 124
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 55.5 bits (132), Expect(2) = 3e-11
Identities = 40/96 (41%), Positives = 52/96 (54%)
Frame = +3
Query: 735 VIWKP*NSE*AKVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEVM 914
V WKP NTD ASR NP SS FC+R D++ Q KEI+ TN +VE +
Sbjct: 158 VCWKPPEGI-LTCNTDVASRCNPEISSYGFCLRNSVGDLVYVQGKEIQ--EGTNLEVEAV 214
Query: 915 AIQ*ALKYIETLQVDKILIKTDFLLLKNIMERI*EV 1022
AI+ L + T V K ++TD +L I+ RI EV
Sbjct: 215 AIREDLAHCVTKGVMKACLETDSQVLIKILTRIWEV 250
Score = 40.4 bits (93), Expect(2) = 3e-11
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +1
Query: 520 MFQMVPSIIV*EL*KRRNTLRHGGKVSTTKLIYQIMHTLVFFKKVRRNNFKHASYRWNTV 699
+ ++VP++++ L KRRN L+HG S L+Y++ L + + +W+ +
Sbjct: 83 LMRVVPTVVIWNLWKRRNNLKHGRPSSYNNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDI 142
Query: 700 VEALNRYNP 726
V L ++ P
Sbjct: 143 VACLEKHKP 151
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 51.2 bits (121), Expect(2) = 7e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +3
Query: 768 KVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEVMAIQ*ALKYIET 947
K NTDGA+RGN SS F +R D+I A+AK I +TN + E +A+ A+ Y +
Sbjct: 1045 KCNTDGAARGNSGASSTSFVVRDEEGDLIYARAKGI--GIATNMEAEALALLEAVWYCQE 1102
Query: 948 LQVDKILIKTDFLLLKNIME 1007
+ + +I+TD L+LK +++
Sbjct: 1103 KDLKEPIIETDSLVLKKMVD 1122
Score = 33.1 bits (74), Expect(2) = 7e-08
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 487 WKIHAQHQVRYMFQMVPSIIV*EL*KRRNTLRHGGKVSTTKLIYQIMHTLVFFKKVRRN 663
WK +++ + + +P+II+ L KRRN +H G + ++++ Q+ KV+ N
Sbjct: 989 WKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFKHRGTTTYSEVVMQVQEEKPGRNKVKCN 1047
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 63.2 bits (152), Expect = 2e-07
Identities = 38/92 (41%), Positives = 54/92 (58%)
Frame = +3
Query: 735 VIWKP*NSE*AKVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEVM 914
V WKP K NTDGAS+GNP +SS FC+R +++ A+ + I +TN E M
Sbjct: 17 VNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEVQSI--GVTTNMDAESM 74
Query: 915 AIQ*ALKYIETLQVDKILIKTDFLLLKNIMER 1010
AI AL+Y + ++ ++TD L LKNI+ R
Sbjct: 75 AIWKALQYCLSQGFQQVSLETDSLTLKNILVR 106
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 57.8 bits (138), Expect = 7e-06
Identities = 33/90 (36%), Positives = 54/90 (60%)
Frame = +3
Query: 735 VIWKP*NSE*AKVNTDGASRGNPRRSS*DFCMRYPNWDII*AQAKEIEGNPSTNTQVEVM 914
V W + + K NTDGAS+GNP S+ +C+R N D+I A+ I +TN + E+
Sbjct: 17 VRWDAPHEDVIKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTAENI--GITTNVEAEMR 74
Query: 915 AIQ*ALKYIETLQVDKILIKTDFLLLKNIM 1004
AI A++Y ++ KI++++D LL+ I+
Sbjct: 75 AILEAIRYCVNKKMRKIILESDSLLMVKII 104