BLASTX nr result
ID: Atropa21_contig00011359
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00011359 (511 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006358880.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 157 1e-36 ref|XP_004245636.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 156 3e-36 gb|ADE05571.1| increased size exclusion limit 1a [Nicotiana bent... 151 1e-34 gb|ADE05572.1| increased size exclusion limit 1b [Nicotiana bent... 140 2e-31 ref|XP_002303572.1| DEAD/DEAH box helicase family protein [Popul... 63 5e-08 >ref|XP_006358880.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like [Solanum tuberosum] Length = 548 Score = 157 bits (398), Expect = 1e-36 Identities = 83/114 (72%), Positives = 89/114 (78%) Frame = +2 Query: 170 MPVLVLTRALLVIGDSLALRKVSQSTRIAPSQGNVRFXXXXXXXXXXXXXXXXEVKTVSA 349 MP LVLTRALL+IGDSLA RKV+Q TRIAPSQGNVRF EVKTVSA Sbjct: 1 MPALVLTRALLLIGDSLAFRKVTQFTRIAPSQGNVRFLSSSGSLTLASLGLKSEVKTVSA 60 Query: 350 NEKNKLQQGVSTIEVPKRREQKRVSGNKTGFIKSKNPVDIKTAPFAVESFSELG 511 NEKNKLQQG+STIEVPK RE+KRVSGNK G +K KNPVDI TAPFA +SFSELG Sbjct: 61 NEKNKLQQGISTIEVPKSREKKRVSGNKQGLVKEKNPVDIMTAPFAAKSFSELG 114 >ref|XP_004245636.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like [Solanum lycopersicum] Length = 548 Score = 156 bits (394), Expect = 3e-36 Identities = 82/114 (71%), Positives = 88/114 (77%) Frame = +2 Query: 170 MPVLVLTRALLVIGDSLALRKVSQSTRIAPSQGNVRFXXXXXXXXXXXXXXXXEVKTVSA 349 MP LVLTRALL+IGDSLA RK +Q TRIAPSQGNVRF EVKTVSA Sbjct: 1 MPALVLTRALLLIGDSLAFRKATQFTRIAPSQGNVRFLSSSGSLTLASLGLKSEVKTVSA 60 Query: 350 NEKNKLQQGVSTIEVPKRREQKRVSGNKTGFIKSKNPVDIKTAPFAVESFSELG 511 NEKNKLQQG+STIEVPK RE+KRVSGNK G +K KNPVDI TAPFA +SFSELG Sbjct: 61 NEKNKLQQGISTIEVPKSREKKRVSGNKQGLVKEKNPVDIMTAPFAAKSFSELG 114 >gb|ADE05571.1| increased size exclusion limit 1a [Nicotiana benthamiana] Length = 551 Score = 151 bits (381), Expect = 1e-34 Identities = 80/114 (70%), Positives = 88/114 (77%) Frame = +2 Query: 170 MPVLVLTRALLVIGDSLALRKVSQSTRIAPSQGNVRFXXXXXXXXXXXXXXXXEVKTVSA 349 MPVLVLTRALL++GDSL+LR VSQ TRIAP + VRF EVKTVSA Sbjct: 1 MPVLVLTRALLLVGDSLSLRNVSQFTRIAPFRDKVRFLSDSGSLTLASLGLKSEVKTVSA 60 Query: 350 NEKNKLQQGVSTIEVPKRREQKRVSGNKTGFIKSKNPVDIKTAPFAVESFSELG 511 NEKNKLQQGVSTIEVPK R +K+VSGNKTG IK +NP+DIKTAPFA ESFSELG Sbjct: 61 NEKNKLQQGVSTIEVPKSRVKKKVSGNKTGLIKERNPIDIKTAPFAAESFSELG 114 >gb|ADE05572.1| increased size exclusion limit 1b [Nicotiana benthamiana] Length = 548 Score = 140 bits (352), Expect = 2e-31 Identities = 75/114 (65%), Positives = 84/114 (73%) Frame = +2 Query: 170 MPVLVLTRALLVIGDSLALRKVSQSTRIAPSQGNVRFXXXXXXXXXXXXXXXXEVKTVSA 349 MPVLVLTRALL++GDSL LR VS TRIAP + V F EVKTV A Sbjct: 1 MPVLVLTRALLLVGDSLFLRNVSPFTRIAPFRDKVGFLSDSGSLTLASLGLKNEVKTVGA 60 Query: 350 NEKNKLQQGVSTIEVPKRREQKRVSGNKTGFIKSKNPVDIKTAPFAVESFSELG 511 NEK+KL+QGVSTIEVPK R +K+VSGNKTG IK +NP+DIKTAPFA ESFSELG Sbjct: 61 NEKDKLRQGVSTIEVPKSRVKKKVSGNKTGLIKERNPIDIKTAPFAAESFSELG 114 >ref|XP_002303572.1| DEAD/DEAH box helicase family protein [Populus trichocarpa] gi|222841004|gb|EEE78551.1| DEAD/DEAH box helicase family protein [Populus trichocarpa] Length = 563 Score = 62.8 bits (151), Expect = 5e-08 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 7/121 (5%) Frame = +2 Query: 170 MPVLVLTRALLVIGDSLALRKVSQSTRIAPSQGNVRFXXXXXXXXXXXXXXXX-----EV 334 MP LV R L ++G+++ L+K+S+ + A Q +VRF E Sbjct: 1 MPSLVSPRLLFLVGETIHLKKLSRGSSSALCQRSVRFFSRVDRDKNAPLTLANLGFNTEF 60 Query: 335 KTVSANEKNKLQQGVST--IEVPKRREQKRVSGNKTGFIKSKNPVDIKTAPFAVESFSEL 508 +T + N++NKL+ IE PK RE K + NK+ ++ K ++I++APFA +SFSEL Sbjct: 61 ETTTKNKRNKLENVKVNYPIEAPKSRE-KVATSNKSRVVRVKKTLEIESAPFAAKSFSEL 119 Query: 509 G 511 G Sbjct: 120 G 120