BLASTX nr result
ID: Atropa21_contig00011293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00011293
(3753 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50976.1| T4.15 [Malus x robusta] 164 6e-97
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 161 6e-77
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 165 4e-76
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He... 111 8e-72
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir... 111 7e-69
emb|CCH50954.1| T1.2 [Malus x robusta] 137 1e-64
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 103 3e-63
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 103 3e-63
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 132 4e-62
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori] 107 2e-60
gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 103 6e-58
emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-dir... 97 4e-54
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366... 125 2e-53
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 142 2e-53
emb|CDJ81301.1| unnamed protein product [Haemonchus contortus] 106 4e-46
emb|CDJ90886.1| Endonuclease exonuclease phosphatase and RNA-dir... 108 7e-41
ref|XP_005753988.1| PREDICTED: RNA-directed DNA polymerase from ... 100 1e-40
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta... 103 5e-40
emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcripta... 101 5e-39
emb|CDJ93360.1| RNA-directed DNA polymerase (reverse transcripta... 96 2e-37
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 164 bits (415), Expect(4) = 6e-97
Identities = 82/188 (43%), Positives = 123/188 (65%)
Frame = -3
Query: 943 NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764
N E Y+ A++EA AV AK+AA++ +Y L+ K G+ +Y+LA+ARE++ RDL+ VRC+
Sbjct: 447 NGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCI 506
Query: 763 KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVK 584
KDED KVL + ++ RW+ YFH L NE ++ L +L N+ + R I+ EEV
Sbjct: 507 KDEDGKVLATENAVKDRWRGYFHNLFNEGHERSASLWELSNSEECRNYSFYRRIRKEEVV 566
Query: 583 GDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYK 404
+++M +AIGPD+IP+E K G+ WLT LFN ILKT +MP E + ST++ +YK
Sbjct: 567 VALKKMKHRKAIGPDDIPIEVWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYK 626
Query: 403 DKCDI*SC 380
+K D+ +C
Sbjct: 627 NKGDVQNC 634
Score = 115 bits (287), Expect(4) = 6e-97
Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
NYRGIKL+SHTMK + +NQFGFMP R T EAI+L+RRL+E+YR K
Sbjct: 636 NYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGK 695
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAY--IRAIKDMYDGVKTRV 48
+DLHMVFIDLEKAY++VP+++LWR LE KG ++ I I + +GV ++
Sbjct: 696 KDLHMVFIDLEKAYDRVPRDILWRILEKKGCMLFADDIVLIDETQEGVNAKL 747
Score = 96.3 bits (238), Expect(4) = 6e-97
Identities = 49/122 (40%), Positives = 74/122 (60%)
Frame = -1
Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
++EEH++T+ S +KT IDFLL+RK D CKDCKVIP E + Q++LLVMD+ I++ ++
Sbjct: 288 KREEHVITYKSGSSKTQIDFLLMRKGDRITCKDCKVIPGESVANQHRLLVMDVLIKRVRQ 347
Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIRG*KSARSFA 1069
+ R +W +L E+++ + W G+A MWD M SCIR K A+
Sbjct: 348 KNKTWKCPRTRWWNLKEEKQAIFKEKVITQCVWDREGEASQMWDSMASCIR--KVAKEVL 405
Query: 1068 GK 1063
G+
Sbjct: 406 GE 407
Score = 52.0 bits (123), Expect(4) = 6e-97
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = -3
Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
+GGD N H+G Y HGG G +RN G ++L+FA A+ + +AN+ F K+
Sbjct: 236 IGGDLNGHVGRETGNYRGFHGGHGFGERNEDGEAILDFAMAYDLFLANTFFKKR 289
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 161 bits (407), Expect(3) = 6e-77
Identities = 79/188 (42%), Positives = 122/188 (64%)
Frame = -3
Query: 943 NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764
N E Y+ A++EA AV AK+AA++ +Y L+ K G+ +Y+LA+ARE++ RDL+ VRC+
Sbjct: 51 NGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCI 110
Query: 763 KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVK 584
KDED KVL + ++ +W+ YFH L NE ++ LG+L N+ + R I+ EEV
Sbjct: 111 KDEDGKVLATENAVKDKWRGYFHNLFNEGHERSASLGELSNSEECRNYSFYRRIRKEEVV 170
Query: 583 GDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYK 404
+++M +A+GPD+IP+E K G+ WL LFN ILKT +MP E + S ++ +YK
Sbjct: 171 VALKKMKHRKAVGPDDIPIEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYK 230
Query: 403 DKCDI*SC 380
+K D+ +C
Sbjct: 231 NKGDVQNC 238
Score = 146 bits (368), Expect(3) = 6e-77
Identities = 73/126 (57%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
NYRGIKL+SHTMK + +NQFGFMP R T EAI+L+RRL+E+YR K
Sbjct: 240 NYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGK 299
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GDSEHF 21
+DLHMVFIDLEKAY++V ++++WR LE KGV VAYI+AIKDMY+G KT V T G +E F
Sbjct: 300 KDLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESF 359
Query: 20 SVVMGL 3
+ +GL
Sbjct: 360 PITVGL 365
Score = 32.0 bits (71), Expect(3) = 6e-77
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
A++VLG +G + WWWN++V K E K
Sbjct: 9 AKEVLGESKGFATHQKESWWWNEEVKAKKECCK 41
>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
Length = 1939
Score = 165 bits (417), Expect(5) = 4e-76
Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
Frame = -3
Query: 943 NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764
N E YK A+KE +AV+ A+ A+E LY L+ K G+K +YR+AK+RERR RDLD V+C+
Sbjct: 846 NWEKYKAAKKETKVAVSEARTRAYEGLYQSLDTKEGEKGIYRIAKSRERRTRDLDQVKCI 905
Query: 763 KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDI-VLGDLK*FGRY*NFGYCRSIKVEEV 587
KD+D +VL ++ I RW+ YF++L NE G K + LG L NF Y R I+ EV
Sbjct: 906 KDKDREVLAQEEKINERWKSYFYELFNE-GQKTLPSLGRLCTREEDQNFNYYRRIRDFEV 964
Query: 586 KGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLY 407
K +++M GRA+GPD IP+E K G+ WLTKLF IL++ +MP+E + ST++ +Y
Sbjct: 965 KEALKQMKNGRAVGPDNIPIEVWKGLGGKGINWLTKLFYEILRSKKMPDEWRKSTLVPIY 1024
Query: 406 KDKCDI*SC 380
+ K DI SC
Sbjct: 1025 RIKGDIQSC 1033
Score = 83.6 bits (205), Expect(5) = 4e-76
Identities = 38/111 (34%), Positives = 62/111 (55%)
Frame = -1
Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
+++EHL+T+ S + + IDF LLR+VD C +CK+IP E L TQ+++LV+D + ++ +
Sbjct: 687 KRDEHLITYKSGMTSSQIDFFLLRRVDRKFCINCKIIPGESLTTQHRVLVLDFRVEQKLR 746
Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIR 1096
+R R +W + + R+ E W +G A MW M IR
Sbjct: 747 KRHHTKNPRTRWWRMKGEEQRSFLRRVGEEAKWDGNGSAEEMWREMAEVIR 797
Score = 51.2 bits (121), Expect(5) = 4e-76
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = -3
Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
+GGD N H+G GY +HGG G N G ++L+F+ F + IAN+ F K+
Sbjct: 635 LGGDLNGHVGREVTGYGSIHGGHGFGVINAEGKTILDFSSTFDLLIANTCFKKR 688
Score = 48.5 bits (114), Expect(5) = 4e-76
Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
NYRGIKL+SHTMK ++ +K
Sbjct: 1035 NYRGIKLMSHTMKLWGKG-----------------------------------DRTEVEK 1059
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTIGD-SEHF 21
RD + LW+ LE + V +AYIRAIKDMY+G T V T G +E F
Sbjct: 1060 RD------------TRYQGRFLWKVLEKRRVRIAYIRAIKDMYEGATTSVKTQGGVTEEF 1107
Query: 20 SVVMGL 3
+ +GL
Sbjct: 1108 PIGIGL 1113
Score = 29.6 bits (65), Expect(5) = 4e-76
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2
Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKKNGVRE 981
A++ G +G + WWWN + EK++ K+ +E
Sbjct: 800 AKESFGESKGIGPRDKESWWWNASIQEKIKIKRECFKE 837
>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
Length = 990
Score = 111 bits (277), Expect(5) = 8e-72
Identities = 65/209 (31%), Positives = 109/209 (52%)
Frame = -3
Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
++KK A+ K ES ++ Y +A++ + AV A+ + LY +LE G K
Sbjct: 379 REKKAAFKKWQESNSPEDRLE----YTVAKRASKRAVARARSESLSPLYDKLETVEGQKL 434
Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDL 647
+Y+LA++R++ +D+ CV+D +L ++ RW+ YF +LLN + +
Sbjct: 435 IYKLARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWRSYFQELLNTQHPCSLHHDPP 494
Query: 646 K*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNV 467
N G I ++E + +RRM G+A+GPD+IP+E KS G+ LT LFN
Sbjct: 495 P------NLGLIAPITLDETRNCLRRMKNGKAVGPDDIPIEAWKSLGSLGVLMLTDLFNH 548
Query: 466 ILKTARMPEE*KWSTMILLYKDKCDI*SC 380
IL T +MP + + S + +YK + + C
Sbjct: 549 ILNTGKMPHQWRLSFITPIYKGRGSVQDC 577
Score = 101 bits (252), Expect(5) = 8e-72
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
+YRGIKL+SHTMK + E+Q+GF P T +AI +R L+E YR+K+
Sbjct: 579 SYRGIKLMSHTMKLFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLMEAYREKR 638
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDSEHF 21
R LH+ F+DL+KA++ VP++ +W L KG+ AYI I+ MY + V T +GD+ F
Sbjct: 639 RALHVAFLDLQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTRPF 698
Query: 20 SVVMGL 3
+ +G+
Sbjct: 699 PITVGV 704
Score = 60.5 bits (145), Expect(5) = 8e-72
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = -1
Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
+ +HL+T+ T ID+LL R+ G +CKVIP E L Q++LLVMD + K
Sbjct: 238 KNSQHLITYKCGSHSTQIDYLLTRRCHMGRVTNCKVIPGESLTAQHRLLVMDFNV--TPK 295
Query: 1248 RRVMDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
R+V + R RIKW L + + + ++ A WDR S I
Sbjct: 296 RKVAEKRRPRIKWWLLNGPMQTDFLAEVKSHNLSTNTETAQEAWDRAQSAI 346
Score = 49.3 bits (116), Expect(5) = 8e-72
Identities = 27/69 (39%), Positives = 38/69 (55%)
Frame = -3
Query: 1633 MLFVPSLRSFIFFMFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGM 1454
+L VPS + +VGGD N H+G + Y+ VHGGFG RN G ++L A +
Sbjct: 175 LLAVPSTE-----LVLVGGDLNGHVGRAAEPYERVHGGFGHGLRNAEGENILRTCIASDL 229
Query: 1453 AIANSKFMK 1427
A+ N+ F K
Sbjct: 230 AVVNTFFQK 238
Score = 40.8 bits (94), Expect(5) = 8e-72
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2
Query: 1091 RKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
R+VLGV +G R + + WWWND+V E KK
Sbjct: 351 RRVLGVSRGGRVIDKETWWWNDEVQEVTREKK 382
>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
(reverse transcriptase) domain containing protein
[Haemonchus contortus]
Length = 816
Score = 111 bits (278), Expect(5) = 7e-69
Identities = 63/216 (29%), Positives = 116/216 (53%), Gaps = 6/216 (2%)
Frame = -3
Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
++KK+AY + +++ + YK +++ A AV AK + LY +L+ + G+K
Sbjct: 344 REKKLAYKRWQKTR----ALEDLAAYKTSKRLAKAAVAKAKNIEMDALYEKLDSREGEKF 399
Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
++RLAKAR R +D+ V+ V++ + +L + +RRRW+ YF +LLNE+ +
Sbjct: 400 VFRLAKARHRATQDIRVVKAVRNSEGAILRKPGEVRRRWKEYFDRLLNEEFARENSSHSE 459
Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
G +K + +EV+ + +M G+A GPD +P+E K+ G++WL
Sbjct: 460 ATAGPIKLWTE------------DEVRKAIGKMKVGKATGPDGVPIEAWKALGEHGIKWL 507
Query: 484 TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
T+ N + R+P+ + ST++ ++K K D C+
Sbjct: 508 TRFLNTVTAEGRIPDAWRRSTIVPIFKQKGDAMDCS 543
Score = 110 bits (275), Expect(5) = 7e-69
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Frame = -2
Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
++ NYRGI+L +HTMK V I E QFGFMPER TT+AI + R+++E+Y
Sbjct: 540 MDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEGQFGFMPERSTTDAIFIARQIMEKY 599
Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GD 33
R+K+R ++ F+DLEKA++++P+EVLW L + V I +KDMYDG T + T G
Sbjct: 600 REKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGQ 659
Query: 32 SEHFSVVMGL 3
+ V +G+
Sbjct: 660 TGAIDVTVGV 669
Score = 56.2 bits (134), Expect(5) = 7e-69
Identities = 33/112 (29%), Positives = 53/112 (47%)
Frame = -1
Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
++ +T+ S +T ID +L+R+ KD KV+P E L TQ++ L+ D+ I KK
Sbjct: 203 KRRSQKVTYSSGGNETEIDHVLVRRSSLKTVKDIKVLPGEELATQHRPLLADIAIELPKK 262
Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIRG 1093
R +R RI+W L + + E+++ G G W I G
Sbjct: 263 SRTRTER-RIRWWKLHRLERENLKEKILEVGLPDPEGPIQQTWSNAVKVILG 313
Score = 47.0 bits (110), Expect(5) = 7e-69
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = -3
Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
+ GD N H+GS +G + VHGG G+ RN G +L+ A A +A+ ++ F K+
Sbjct: 151 IAGDMNGHVGSERRGLERVHGGRGIGVRNEEGERVLDLAMAHDLAVCSTFFAKR 204
Score = 28.1 bits (61), Expect(5) = 7e-69
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
A++ LG +G ++ W+WND+V + KK
Sbjct: 315 AKETLGETRGGLRGNKEAWFWNDEVQRVVREKK 347
>emb|CCH50954.1| T1.2 [Malus x robusta]
Length = 554
Score = 137 bits (346), Expect(3) = 1e-64
Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
NYRGIKL+SHTMK + +NQF FMP T EAI+L+R+L+E+YR K
Sbjct: 259 NYRGIKLMSHTMKLLARVIEHRLRQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRDGK 318
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GDSEHF 21
DLHMVFIDLEK Y++VP+++LWR LE KGV VAYI+AIKDMYDG KT V T G E F
Sbjct: 319 NDLHMVFIDLEKVYDRVPRDILWRILEKKGVRVAYIQAIKDMYDGAKTAVRTYEGQIESF 378
Query: 20 SVVMGL 3
+ + L
Sbjct: 379 PITVRL 384
Score = 125 bits (314), Expect(3) = 1e-64
Identities = 76/199 (38%), Positives = 113/199 (56%)
Frame = -3
Query: 976 VESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARER 797
V++K + +K + LYK E AK A KK D +Y+LAK RE+
Sbjct: 70 VQTKVKAKKECCKALYKDMTDENGERYRRAKQEA---------KKALD--IYKLAKVREK 118
Query: 796 RARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFG 617
+ RDL+ VRC+KDED KVL + ++ R + YFH L NE + LG+L Y N+
Sbjct: 119 KTRDLNQVRCIKDEDGKVLATENAVKDRLRDYFHNLFNEGHEWSTSLGELSNSEEYRNYF 178
Query: 616 YCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE 437
+ R I+ EEV +++M +A+GP++IP++ K G+ WLT LFN ILK +M E
Sbjct: 179 FYRRIRKEEVVVALKKMKHIKAVGPNDIPIKVWKVLGETGITWLTDLFNRILKMKKMSNE 238
Query: 436 *KWSTMILLYKDKCDI*SC 380
+ ST++ +YK+K DI +C
Sbjct: 239 WRNSTLVPIYKNKGDIQNC 257
Score = 35.0 bits (79), Expect(3) = 1e-64
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -2
Query: 1097 GARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
G R+V G+ +G+ WWWN++V K++AKK
Sbjct: 48 GIRRVQGLCSTPKGIF---WWWNEEVQTKVKAKK 78
>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 1253
Score = 103 bits (256), Expect(4) = 3e-63
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Frame = -3
Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875
GG + W + E K +KW +R Y A++ + AV A+
Sbjct: 626 GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 685
Query: 874 FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695
LY LE G K +Y+LA+AR++ +D+ VKD +L A ++ RW+ YF
Sbjct: 686 LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 745
Query: 694 KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515
+LLN + + N G I +E + +RRM +A+GPD+IP+E K
Sbjct: 746 ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 799
Query: 514 SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380
S G+ LT LFN +L T MP + ++S + +YK + + C
Sbjct: 800 SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 844
Score = 102 bits (254), Expect(4) = 3e-63
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
+YRG+K++SHTMK + E Q+GF P T +AI IR L+E YR+K+
Sbjct: 846 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 905
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMY-DGVKTRVGTIGDSEHF 21
R LH+ F+DL+KA++ VP++ +W L KG+ AYI I+DMY D V +GD++ F
Sbjct: 906 RALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPF 965
Query: 20 SVVMGL 3
+ +GL
Sbjct: 966 PISVGL 971
Score = 57.8 bits (138), Expect(4) = 3e-63
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = -1
Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240
+HL+T+ S T ID+LL R+ +CKVIP E L Q++LLVMD + +KK V
Sbjct: 508 QHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 565
Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
+ R RI+W L + ++ ++ A +WDR S I
Sbjct: 566 AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 613
Score = 50.8 bits (120), Expect(4) = 3e-63
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -3
Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427
+ IVGGD N H+G + +D VHGGFG RN G ++L A +A+ N+ F K
Sbjct: 450 VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 505
>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 985
Score = 103 bits (256), Expect(4) = 3e-63
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Frame = -3
Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875
GG + W + E K +KW +R Y A++ + AV A+
Sbjct: 358 GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 417
Query: 874 FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695
LY LE G K +Y+LA+AR++ +D+ VKD +L A ++ RW+ YF
Sbjct: 418 LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 477
Query: 694 KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515
+LLN + + N G I +E + +RRM +A+GPD+IP+E K
Sbjct: 478 ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 531
Query: 514 SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380
S G+ LT LFN +L T MP + ++S + +YK + + C
Sbjct: 532 SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 576
Score = 102 bits (254), Expect(4) = 3e-63
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
+YRG+K++SHTMK + E Q+GF P T +AI IR L+E YR+K+
Sbjct: 578 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 637
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMY-DGVKTRVGTIGDSEHF 21
R LH+ F+DL+KA++ VP++ +W L KG+ AYI I+DMY D V +GD++ F
Sbjct: 638 RALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPF 697
Query: 20 SVVMGL 3
+ +GL
Sbjct: 698 PISVGL 703
Score = 57.8 bits (138), Expect(4) = 3e-63
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = -1
Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240
+HL+T+ S T ID+LL R+ +CKVIP E L Q++LLVMD + +KK V
Sbjct: 240 QHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 297
Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
+ R RI+W L + ++ ++ A +WDR S I
Sbjct: 298 AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 345
Score = 50.8 bits (120), Expect(4) = 3e-63
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -3
Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427
+ IVGGD N H+G + +D VHGGFG RN G ++L A +A+ N+ F K
Sbjct: 182 VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 237
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 132 bits (331), Expect(3) = 4e-62
Identities = 66/126 (52%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
NYRGIKL+SHTMK + +NQFGFM R T EAI+L++R++E+YR K
Sbjct: 218 NYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDK 277
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDSEHF 21
+DLH+VF DLEK Y++VP+E+LW+ LE K V +AYIRAIKDMY+ T V T G +E F
Sbjct: 278 KDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDF 337
Query: 20 SVVMGL 3
+ +GL
Sbjct: 338 PITIGL 343
Score = 125 bits (313), Expect(3) = 4e-62
Identities = 74/193 (38%), Positives = 106/193 (54%)
Frame = -3
Query: 958 MEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLD 779
+E W + YKIARKEA V+ A+ AFE LY L K G+K +Y+L+K RER+ RDLD
Sbjct: 57 VETW---DKYKIARKEAKKVVSEARTQAFEGLYQSLGTKEGEKSIYKLSKGRERKTRDLD 113
Query: 778 HVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIK 599
V+C+KDE+ +VL+ + +G N+ Y R I+
Sbjct: 114 QVKCIKDEEGRVLVR----------------HRRGGP--------------NYNYYRRIQ 143
Query: 598 VEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTM 419
EV+ ++RM A+GPD IP+E KS G WL LFN I++T +M +E + ST+
Sbjct: 144 EHEVREALKRMGSDEAVGPDNIPIEVWKSLGDRGTVWLANLFNEIIRTKKMSDEWRRSTL 203
Query: 418 ILLYKDKCDI*SC 380
I + K+K DI +C
Sbjct: 204 IPIDKNKGDIQNC 216
Score = 32.7 bits (73), Expect(3) = 4e-62
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKKNGVREIGR 972
A++ LG +G + WWWND V K+ K++ ++ R
Sbjct: 13 AKETLGESRGFGPRGKESWWWNDNVQSKVRIKRDCFKDWSR 53
>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
Length = 996
Score = 107 bits (268), Expect(4) = 2e-60
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 6/226 (2%)
Frame = -3
Query: 1057 VSIEGTGGGMIKFMRRWKQKKMAYAKLVESKDEMEKWTN------RELYKIARKEANLAV 896
+++ T GG I W + + + KD + W + +E YK +KE V
Sbjct: 354 ITLGRTKGGRINNKETWWWTEAVQNAIQKKKDAFKTWQSTQTSEDQERYKRIKKETKKIV 413
Query: 895 TAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRR 716
+ A + +Y +LE K G K +++LAK R RD R VKD + ++L D+ +
Sbjct: 414 AVERAVALKTMYEQLETKEGQKCIFKLAKQRCWSTRDPTRCRAVKDPNGELLYGDSDVLS 473
Query: 715 RWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDE 536
W Y+ +LLN + ++ N G I+ E K + +M +A GPD
Sbjct: 474 AWHQYYEQLLNPTQAAIQLTKVVR------NIGLIPPIRPNEFKMALEKMPNKKATGPDG 527
Query: 535 IPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDK 398
IPVE K G+E LTKLFN +L++++MP + ST++ +YK K
Sbjct: 528 IPVEAWKCLREHGIETLTKLFNCVLRSSKMPAAWRLSTIVPIYKGK 573
Score = 92.4 bits (228), Expect(4) = 2e-60
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Frame = -2
Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207
E NYRGIKLLSHTMK + +N +GF+ TT+ + + + E+YR
Sbjct: 578 ECSNYRGIKLLSHTMKLYERVIDSRLRSECSLSKNHYGFVQGLSTTDPMFALNTIAEEYR 637
Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDS 30
+K R L++ F+D+EKA+++VP++ +W L K V Y+ I DMY ++ V T +G +
Sbjct: 638 EKLRPLYVAFLDMEKAFDRVPRDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQT 697
Query: 29 EHFSVVMGL 3
+ +V GL
Sbjct: 698 KPIAVAEGL 706
Score = 54.7 bits (130), Expect(4) = 2e-60
Identities = 31/110 (28%), Positives = 54/110 (49%)
Frame = -1
Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
+K EH +T+ S + ID++L+ + G +CKVIP E +TQ++++VMD+ +K K
Sbjct: 240 KKPEHTITYKSGQTTSQIDYILVNRAYIGRVTNCKVIPGECAVTQHRIVVMDMLFKKTSK 299
Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
+ KW +L E L + + D +WD ++ I
Sbjct: 300 TKTSHTPEITKWWNLKGDKIPEFCNHL-SNLKVDTELDIDNIWDHLSKSI 348
Score = 50.1 bits (118), Expect(4) = 2e-60
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = -3
Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
++GGD N HIG+ K + VHGG G N G +L A AF +AI N+ F KK
Sbjct: 187 LLGGDLNGHIGTENKAFKRVHGGHGFGTINEEGEVILSTAAAFDLAITNTFFAKK 241
>gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 1470
Score = 103 bits (256), Expect(4) = 6e-58
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Frame = -3
Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875
GG + W + E K +KW +R Y A++ + AV A+
Sbjct: 1144 GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 1203
Query: 874 FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695
LY LE G K +Y+LA+AR++ +D+ VKD +L A ++ RW+ YF
Sbjct: 1204 LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 1263
Query: 694 KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515
+LLN + + N G I +E + +RRM +A+GPD+IP+E K
Sbjct: 1264 ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 1317
Query: 514 SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380
S G+ LT LFN +L T MP + ++S + +YK + + C
Sbjct: 1318 SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 1362
Score = 82.4 bits (202), Expect(4) = 6e-58
Identities = 38/91 (41%), Positives = 57/91 (62%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
+YRG+K++SHTMK + E Q+GF P T +AI IR L+E YR+K+
Sbjct: 1364 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 1423
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGV 105
R LH+ F+DL+KA++ VP++ +W L KG+
Sbjct: 1424 RALHVAFLDLQKAFDCVPRQCIWWALRFKGI 1454
Score = 60.1 bits (144), Expect(4) = 6e-58
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = -1
Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240
+HL+T+ S T ID+LL R+ G +CKVIP E L Q++LLVMD + +KK V
Sbjct: 1026 QHLITYKSGSHSTQIDYLLTRRCHIGKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 1083
Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
+ R RI+W L + ++ ++ A +WDR S I
Sbjct: 1084 AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 1131
Score = 50.8 bits (120), Expect(4) = 6e-58
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -3
Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427
+ IVGGD N H+G + +D VHGGFG RN G ++L A +A+ N+ F K
Sbjct: 968 VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 1023
>emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
(reverse transcriptase) domain containing protein
[Haemonchus contortus]
Length = 854
Score = 97.1 bits (240), Expect(4) = 4e-54
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
Frame = -3
Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
++KK +A L+E D+ N + Y+IA+KEA AV + K A F L +LE + G++
Sbjct: 352 EKKKQYHAFLIEKTDD-----NWQRYQIAKKEAKKAVASEKAAHFAELNKKLESREGERY 406
Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLN-EKGDKDIVLGD 650
+YRLAK R R+ D++ + DE+ ++L + + RW+ YF + E I
Sbjct: 407 IYRLAKTRNRQTEDIEKFFGINDENGRLLTDRRQVLERWREYFANISTVEFAHPAIPCAP 466
Query: 649 LK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFN 470
G + I V E +++M G+A GPD++ + KS WLT+ FN
Sbjct: 467 PV-------HGPVQKITVSETITALKKMKSGKATGPDDVAADLWKSKGWNPAGWLTEFFN 519
Query: 469 VILKTARMPEE*KWSTMILLYKDKCDI*SC 380
+ ++PE + ST I ++K K + C
Sbjct: 520 QAVAEKKVPESWQQSTTIPIWKKKGSLGDC 549
Score = 78.2 bits (191), Expect(4) = 4e-54
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = -2
Query: 374 YRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKKR 195
YR I+LLSH+MK V + NQ F+ T +AIH L+E++ +K+R
Sbjct: 552 YRPIRLLSHSMKFFERIVDSRIRDIVELITNQCVFVAGCSTIDAIHATSLLLEKHHEKRR 611
Query: 194 DLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVG-TIGDSEHFS 18
+H+ F+DLEKA+ +VP++V+W L GV +I ++ +Y K+RV G F
Sbjct: 612 PIHLAFLDLEKAFGRVPRDVIWYALRQHGVPEEHIEWVRILYTSPKSRVQMAAGTLTEFP 671
Query: 17 VVMGL 3
+ +G+
Sbjct: 672 ISVGV 676
Score = 55.8 bits (133), Expect(4) = 4e-54
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = -1
Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEK- 1252
+++ HL+TF S +T IDF+L+R D GL D K +P E + TQ++ L+ L+I K
Sbjct: 212 KRDSHLITFYSGENRTQIDFVLVRHRDQGLVTDAKTVPYETVATQHRPLICTLKIAPPKP 271
Query: 1251 KRRVMDDRLRIKWGSL-----TMASAKEMGERLMAEGAWGSSGDAI 1129
K RIKW L T+ S+ + + W + +AI
Sbjct: 272 KLAERSGPARIKWWRLKEKEETVVSSILLPAVTTVDETWKGAAEAI 317
Score = 52.4 bits (124), Expect(4) = 4e-54
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -3
Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
+V GD N H+G+ GY HGGFG RN G +LE+A + +AI N++F K+
Sbjct: 160 VVAGDLNGHVGATKDGYS-CHGGFGYGSRNTDGERILEYADSHNLAIVNTRFRKR 213
>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria chalumnae]
Length = 1500
Score = 125 bits (315), Expect(2) = 2e-53
Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 6/219 (2%)
Frame = -3
Query: 1018 MRRWKQKKMAYAKLVESKDEMEKWTNR------ELYKIARKEANLAVTAAKMAAFERLYV 857
MR W + K + K + ++W + Y I +++ V AK+ A+ LY
Sbjct: 224 MRWWNEDVQEVTK--DKKIKFKRWQKTRQKEDLDEYVIVKRQTKRVVAKAKVMAYVELYQ 281
Query: 856 ELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK 677
+L+ + G+K +YR+A+ARER+ RD D V+ +KD + +V++++ ++ RW+ YF KLLNE+
Sbjct: 282 KLDSREGEKMVYRIARARERKKRDFDQVKVIKDSEGQVILDENKVKERWREYFEKLLNEE 341
Query: 676 GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAG 497
++ + L N I EEV +++M +A GPDE+P+E K G
Sbjct: 342 NPREELPEGLP-----ENHTAVEGITKEEVIQAMKKMKNRKATGPDEVPIETFKEMKEMG 396
Query: 496 LEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380
L LT+L+ I + +MP E + ST++ ++K K D+ C
Sbjct: 397 LVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRKGDVQDC 435
Score = 114 bits (284), Expect(2) = 2e-53
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Frame = -2
Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207
+ +NYRGI L+SH MK V I ENQFGF R T +AI ++ L+E+Y+
Sbjct: 434 DCNNYRGIALMSHAMKLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYK 493
Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRV-GTIGDS 30
+K++DLHMVF+DLEKAY++VP+ ++W C+ +G+ YIR +KDMY G K V G +
Sbjct: 494 EKRKDLHMVFVDLEKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTT 553
Query: 29 EHFSVVMGL 3
F V +G+
Sbjct: 554 TSFPVKVGV 562
Score = 47.4 bits (111), Expect(2) = 1e-09
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = -1
Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
++E +L+T+ S ++ ID++L+++ K+CKVI E L Q++LLVMD + KK
Sbjct: 118 KQERYLVTYRSGNTQSQIDYILVKRQLLKRVKNCKVILGECLTGQHRLLVMDYKTECAKK 177
Query: 1248 RRV-MDDRLRIKWGSL 1204
+ ++ +IKW L
Sbjct: 178 NKAKLEMERKIKWWCL 193
Score = 45.1 bits (105), Expect(2) = 1e-09
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -3
Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
IVG D N +G GY+ HGG G +RN G ++L A+A +A+ N+ F K+
Sbjct: 65 IVGVDLNGRVGRDRCGYEGNHGGQGYGERNTEGENVLRMAQAHNLAVVNTYFKKQ 119
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 142 bits (357), Expect(2) = 2e-53
Identities = 73/126 (57%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
NYRGIKL++HTMK + ENQFGFM R TEAI+L+RR++E+YR K
Sbjct: 130 NYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNK 189
Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTIGD-SEHF 21
RDLHMVFIDLEKAY++VP+EVLW+ LE V +AYIRAIKDMYDG T V T G +E F
Sbjct: 190 RDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEF 249
Query: 20 SVVMGL 3
+ +GL
Sbjct: 250 PIGIGL 255
Score = 97.8 bits (242), Expect(2) = 2e-53
Identities = 54/127 (42%), Positives = 76/127 (59%)
Frame = -3
Query: 760 DEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKG 581
D+D +VL ++ I RW+ YF++L NE LG L + NF Y R I+ EVK
Sbjct: 2 DKDGEVLAQEEKINERWKSYFYELFNEGQKTLSSLGRLCTREKDKNFDYYRRIRDFEVKE 61
Query: 580 DVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKD 401
+ +M RA+GPD IP+E K + WLTKLFN IL++ +MP E + ST++ +YK+
Sbjct: 62 ALNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKN 121
Query: 400 KCDI*SC 380
K DI SC
Sbjct: 122 KGDIQSC 128
>emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]
Length = 499
Score = 106 bits (264), Expect(3) = 4e-46
Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
Frame = -3
Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
++KK+AY + +++ + YK +++ A AV AK + LY +L+ + G+K
Sbjct: 129 REKKLAYERWQKTR----ALEDLAAYKTSKRLAKAAVAKAKNMEMDALYEKLDSREGEKF 184
Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
++RLAKAR R +D+ V+ V++ + +L + +RRRW+ YF K LNE+ +
Sbjct: 185 VFRLAKARHRATQDIGVVKSVRNSEGAILRKPGEVRRRWKEYFDKFLNEEFARENSSHLE 244
Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
G +K + +EV+ + +M G+A GP +P+E K+ G++WL
Sbjct: 245 ETAGPIK-------LKMKCDVTEDEVRIAIGKMKVGKATGPGGVPIEAWKALGEHGIKWL 297
Query: 484 TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
TK N + R+P+ + ST++ ++K K D C+
Sbjct: 298 TKFLNTVTAEGRIPDAWRRSTIVPIFKRKGDPMDCS 333
Score = 102 bits (254), Expect(3) = 4e-46
Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Frame = -2
Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
++ NYRGI+L +HTMK V I E FGFMPER TT+AI + R+++ +Y
Sbjct: 330 MDCSNYRGIRLTAHTMKLYERMVDSRLRGLVPISEKLFGFMPERSTTDAIFIARQIMGKY 389
Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GD 33
R+ +R ++ F+DLEKA++++P+EVLW L + V I +KDMYDG T + T G
Sbjct: 390 REMRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGH 449
Query: 32 SEHFSVVMGL 3
+ V +G+
Sbjct: 450 TGAIDVTVGV 459
Score = 27.3 bits (59), Expect(3) = 4e-46
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
A++ LG +G + W+WND+V + KK
Sbjct: 100 AKETLGETRGGLRGDKEAWFWNDEVQRVVREKK 132
>emb|CDJ90886.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
(reverse transcriptase) domain containing protein
[Haemonchus contortus]
Length = 520
Score = 108 bits (270), Expect(3) = 7e-41
Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
Frame = -3
Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
++KK+AY + +++ N YK +++ A AV A + LY +L+ + G+K
Sbjct: 202 REKKLAYKRWQKTR----ALENLAAYKTSKRLAKAAVAKANKMEMDALYGKLDSREGEKF 257
Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
++RLAKAR R +D+ V+ V++ + +L + +RRRW+ YF +LLNE+ +
Sbjct: 258 VFRLAKARNRATQDIGVVKSVRNSEGAILRKPGEVRRRWKEYFDRLLNEEFARGNSSHLE 317
Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
G +K + +EV+ + +M G+A GPD +P+E K+ G++WL
Sbjct: 318 ATAGPIKLWTE------------DEVRIAIGKMKVGKATGPDGVPIEAWKALGEHGIKWL 365
Query: 484 TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
T+ N + R+P+ + ST+ ++K K D C+
Sbjct: 366 TRFLNTVTAKGRIPDAWRRSTIAPIFKQKGDAMDCS 401
Score = 83.2 bits (204), Expect(3) = 7e-41
Identities = 38/84 (45%), Positives = 59/84 (70%)
Frame = -2
Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
++ NYRGI+L +HTMK V I E QFGFMPER TT+AI + R+++E+Y
Sbjct: 398 MDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEEQFGFMPERSTTDAIFIARQIMEKY 457
Query: 209 RQKKRDLHMVFIDLEKAYNKVPKE 138
R+K+R ++ F+DLEKA++++P++
Sbjct: 458 REKRRPCYLAFLDLEKAFDRLPRK 481
Score = 26.6 bits (57), Expect(3) = 7e-41
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
A++ LG QGS + W+ ND+V + + KK
Sbjct: 173 AKETLGETQGSSRGDKEAWFGNDEVQQVVREKK 205
>ref|XP_005753988.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Pundamilia nyererei]
Length = 569
Score = 100 bits (249), Expect(2) = 1e-40
Identities = 65/210 (30%), Positives = 104/210 (49%)
Frame = -3
Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
K+KK A ++S+ + + + Y+ R A AV AAK + +++LY EL+ GG K
Sbjct: 60 KEKKSALKVWLKSRSDGDY----QQYRALRSAAKKAVAAAKASHYDQLYEELDTPGGANK 115
Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDL 647
+YRLA +R R +D+ V+ +KD + + L + I RW YF + N + +
Sbjct: 116 IYRLASSRHRATQDIGQVKHIKDANHQTLRDPPAILNRWSEYFSDICNVEFPHQPI---- 171
Query: 646 K*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNV 467
G I ++EV+ V+ M G+A GPD+IP E K R G L LFN
Sbjct: 172 --HSAPPVPGPVPPITIKEVEAAVKNMKNGKATGPDDIPAEVWKLLGRQGALVLASLFNS 229
Query: 466 ILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
I++ +P S + ++K K D+ C+
Sbjct: 230 IIRDGTVPAAWSTSITVPIWKGKGDVAECS 259
Score = 96.3 bits (238), Expect(2) = 1e-40
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Frame = -2
Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207
E NYR I+LLSHTMK V + NQ GF+ R TT+AIH R L+E++R
Sbjct: 257 ECSNYRPIRLLSHTMKVFERIIDARMREIVNLTPNQCGFIRGRGTTDAIHAARLLLEKHR 316
Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRV-GTIGDS 30
+K + +HM F+DLEKA+++VP +++W L+ GV AY++ K +Y V + V +G S
Sbjct: 317 EKSKTIHMAFLDLEKAFDRVPHDLIWHSLQSHGVPEAYVKWTKLLYRQVTSVVRSPVGTS 376
Query: 29 EHFSVVMGL 3
F++ +G+
Sbjct: 377 PPFNINVGI 385
>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain
containing protein [Haemonchus contortus]
Length = 1526
Score = 103 bits (258), Expect(2) = 5e-40
Identities = 51/116 (43%), Positives = 75/116 (64%)
Frame = -2
Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
++ NYRGI+L +HTMK V I E QFGFMP R TT+AI + R+++ +Y
Sbjct: 603 MDCSNYRGIRLAAHTMKLYERLVDSRLRELVPISEKQFGFMPGRSTTDAIFITRQVMGKY 662
Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT 42
R+K+R ++ F+DLEKA++++P++VLWR L + V I +KDMYDG T + T
Sbjct: 663 REKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRT 718
Score = 90.9 bits (224), Expect(2) = 5e-40
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Frame = -3
Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
+QKK AY + ++ + Y+ +++ A AV AK + LY L+ + G+K
Sbjct: 407 RQKKSAYKRWQRTRAPEDL----SAYRTSKRLAKAAVAKAKNTEMDALYEILDSREGEKF 462
Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
++RLAKAR +D+ V+ VK+ + +L W+ YF LLNE+ +
Sbjct: 463 VFRLAKARHLATQDIGVVKSVKNSEGAILTXXXXXXXXWEEYFDGLLNEEFARQNSSQLE 522
Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
G + + EV+ + +M G+A GPD +P++ K+ G++WL
Sbjct: 523 ATAGPINLWTE------------NEVRRAMGKMKVGKATGPDGVPIKAWKALGEHGVKWL 570
Query: 484 TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
T+ N + R+P+ + ST++ ++K K D C+
Sbjct: 571 TRFLNTVTAKGRIPDAWRRSTIVPIFKQKGDAMDCS 606
Score = 80.9 bits (198), Expect(2) = 1e-14
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Frame = -3
Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
+QKK AY + +++ + Y+ +++ A AV AK + LY +L+ + G+K
Sbjct: 139 RQKKSAYKRWQKTRAPEDL----AAYRTSKRLAKAAVAKAKNTEMDALYEKLDSREGEKF 194
Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
++RLAKAR R RD+ V+ V++ + +L + +RRRW+ YF LLNE+ +
Sbjct: 195 VFRLAKARHRATRDIGVVKSVRNSEGAILRKPGEVRRRWEEYFDGLLNEEFARQNSSQLE 254
Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
G + + EV+ + +M G+A GPD +P+E K+ G++ +
Sbjct: 255 ATAGPINLWTE------------NEVRRAMGKMKVGKATGPDGVPIEAWKALGEYGVKCM 302
Query: 484 TKLFN 470
+ ++
Sbjct: 303 EEKYH 307
Score = 28.5 bits (62), Expect(2) = 1e-14
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -2
Query: 1094 ARKVLGVLQGSRGVHRGD---WWWNDKVHEKMEAKKNGVR 984
A++ LG +RG RGD W+WND+V + KK+ +
Sbjct: 110 AKETLGE---TRGGFRGDKEAWFWNDEVQRVVRQKKSAYK 146
>emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcriptase) domain
containing protein [Haemonchus contortus]
Length = 432
Score = 101 bits (251), Expect(2) = 5e-39
Identities = 50/116 (43%), Positives = 74/116 (63%)
Frame = -2
Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
++ N RGI+L +HT+K V I E+Q GFMPER TT+AI + R+++E+Y
Sbjct: 157 MDCSNCRGIRLAAHTIKLYERLVDSRLRDLVPISEDQIGFMPERSTTDAIFIARQIMEKY 216
Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT 42
R K+R ++ F+DLEKA++++P+EVLW L + V I +KDMYDG T + T
Sbjct: 217 RGKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRT 272
Score = 90.5 bits (223), Expect(2) = 5e-39
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Frame = -3
Query: 871 ERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHK 692
+ LY +L+ + G+K ++RLAKAR R +D+ V+ V++ + +L + +RRRW+ YF +
Sbjct: 2 DALYEKLDSREGEKFVFRLAKARHRATQDIGVVKSVRNSEGAILRKPGKVRRRWKEYFDR 61
Query: 691 LLNEK------GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIP 530
LLNE+ + G +K + +EV+ + +M G+A GPD +P
Sbjct: 62 LLNEEFARENSSHLEATAGPIKLWTE------------DEVRIAIGKMKVGKATGPDGVP 109
Query: 529 VEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
+E ++ G++WLT+ N + R+P+ + S + ++K K D C+
Sbjct: 110 IEAWEALGEHGIKWLTRFLNTVSAEGRIPDAWRRSAIDPIFKQKGDAMDCS 160
>emb|CDJ93360.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
protein [Haemonchus contortus]
Length = 506
Score = 96.3 bits (238), Expect(2) = 2e-37
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 12/234 (5%)
Frame = -3
Query: 1042 TGGGMIKFMRRWKQKKMAYAKLVESKDEMEKWTNREL------YKIARKEANLAVTAAKM 881
T GG W + + K ++W Y+ +++ A AV AK
Sbjct: 193 TRGGFRGDKEAWFWNDEVQRVVRQKKSACKRWQRTRAPEDLSAYRTSKRLAKAAVAKAKN 252
Query: 880 AAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFY 701
+ LY +L+ + G K ++RLAKAR R +D+ V+ V++ + +L + +RRRW+ Y
Sbjct: 253 TEMDALYEKLDTREGGKFVFRLAKARHRATQDIGVVKSVRNSEGAILRKPGDVRRRWKEY 312
Query: 700 FHKLLNEK------GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPD 539
F L NE+ + G + + EV+ + +M G+A G D
Sbjct: 313 FDGLFNEEFARQNSSQLEATAGPINLWTE------------NEVRRAMGKMKVGKATGSD 360
Query: 538 EIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
+P+E K+ G++WLT+ N + R+P+ + ST++ ++K K D C+
Sbjct: 361 GVPIEAWKALGEHGVKWLTRFLNTVTAERRIPDAWRRSTIVPIFKQKGDAMECS 414
Score = 90.1 bits (222), Expect(2) = 2e-37
Identities = 42/90 (46%), Positives = 62/90 (68%)
Frame = -2
Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
+E NYRGI+L +HTMK V I QFGFMPER TT+AI + R+++E+Y
Sbjct: 411 MECSNYRGIRLTAHTMKLYERLVDSRLRELVPISHEQFGFMPERSTTDAIFIARQVMEKY 470
Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCL 120
R+K+ ++ F+DLEKA++++P++VLWR L
Sbjct: 471 REKRGPCYIAFLDLEKAFDRLPRQVLWRAL 500