BLASTX nr result
ID: Atropa21_contig00011293
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00011293 (3753 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50976.1| T4.15 [Malus x robusta] 164 6e-97 emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 161 6e-77 gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 165 4e-76 emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He... 111 8e-72 emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir... 111 7e-69 emb|CCH50954.1| T1.2 [Malus x robusta] 137 1e-64 gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 103 3e-63 gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 103 3e-63 gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 132 4e-62 gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori] 107 2e-60 gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 103 6e-58 emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-dir... 97 4e-54 ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366... 125 2e-53 gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 142 2e-53 emb|CDJ81301.1| unnamed protein product [Haemonchus contortus] 106 4e-46 emb|CDJ90886.1| Endonuclease exonuclease phosphatase and RNA-dir... 108 7e-41 ref|XP_005753988.1| PREDICTED: RNA-directed DNA polymerase from ... 100 1e-40 emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta... 103 5e-40 emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcripta... 101 5e-39 emb|CDJ93360.1| RNA-directed DNA polymerase (reverse transcripta... 96 2e-37 >emb|CCH50976.1| T4.15 [Malus x robusta] Length = 986 Score = 164 bits (415), Expect(4) = 6e-97 Identities = 82/188 (43%), Positives = 123/188 (65%) Frame = -3 Query: 943 NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764 N E Y+ A++EA AV AK+AA++ +Y L+ K G+ +Y+LA+ARE++ RDL+ VRC+ Sbjct: 447 NGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCI 506 Query: 763 KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVK 584 KDED KVL + ++ RW+ YFH L NE ++ L +L N+ + R I+ EEV Sbjct: 507 KDEDGKVLATENAVKDRWRGYFHNLFNEGHERSASLWELSNSEECRNYSFYRRIRKEEVV 566 Query: 583 GDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYK 404 +++M +AIGPD+IP+E K G+ WLT LFN ILKT +MP E + ST++ +YK Sbjct: 567 VALKKMKHRKAIGPDDIPIEVWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYK 626 Query: 403 DKCDI*SC 380 +K D+ +C Sbjct: 627 NKGDVQNC 634 Score = 115 bits (287), Expect(4) = 6e-97 Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 2/112 (1%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 NYRGIKL+SHTMK + +NQFGFMP R T EAI+L+RRL+E+YR K Sbjct: 636 NYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGK 695 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAY--IRAIKDMYDGVKTRV 48 +DLHMVFIDLEKAY++VP+++LWR LE KG ++ I I + +GV ++ Sbjct: 696 KDLHMVFIDLEKAYDRVPRDILWRILEKKGCMLFADDIVLIDETQEGVNAKL 747 Score = 96.3 bits (238), Expect(4) = 6e-97 Identities = 49/122 (40%), Positives = 74/122 (60%) Frame = -1 Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249 ++EEH++T+ S +KT IDFLL+RK D CKDCKVIP E + Q++LLVMD+ I++ ++ Sbjct: 288 KREEHVITYKSGSSKTQIDFLLMRKGDRITCKDCKVIPGESVANQHRLLVMDVLIKRVRQ 347 Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIRG*KSARSFA 1069 + R +W +L E+++ + W G+A MWD M SCIR K A+ Sbjct: 348 KNKTWKCPRTRWWNLKEEKQAIFKEKVITQCVWDREGEASQMWDSMASCIR--KVAKEVL 405 Query: 1068 GK 1063 G+ Sbjct: 406 GE 407 Score = 52.0 bits (123), Expect(4) = 6e-97 Identities = 22/54 (40%), Positives = 33/54 (61%) Frame = -3 Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424 +GGD N H+G Y HGG G +RN G ++L+FA A+ + +AN+ F K+ Sbjct: 236 IGGDLNGHVGRETGNYRGFHGGHGFGERNEDGEAILDFAMAYDLFLANTFFKKR 289 >emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus domestica] Length = 622 Score = 161 bits (407), Expect(3) = 6e-77 Identities = 79/188 (42%), Positives = 122/188 (64%) Frame = -3 Query: 943 NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764 N E Y+ A++EA AV AK+AA++ +Y L+ K G+ +Y+LA+ARE++ RDL+ VRC+ Sbjct: 51 NGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCI 110 Query: 763 KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVK 584 KDED KVL + ++ +W+ YFH L NE ++ LG+L N+ + R I+ EEV Sbjct: 111 KDEDGKVLATENAVKDKWRGYFHNLFNEGHERSASLGELSNSEECRNYSFYRRIRKEEVV 170 Query: 583 GDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYK 404 +++M +A+GPD+IP+E K G+ WL LFN ILKT +MP E + S ++ +YK Sbjct: 171 VALKKMKHRKAVGPDDIPIEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYK 230 Query: 403 DKCDI*SC 380 +K D+ +C Sbjct: 231 NKGDVQNC 238 Score = 146 bits (368), Expect(3) = 6e-77 Identities = 73/126 (57%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 NYRGIKL+SHTMK + +NQFGFMP R T EAI+L+RRL+E+YR K Sbjct: 240 NYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGK 299 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GDSEHF 21 +DLHMVFIDLEKAY++V ++++WR LE KGV VAYI+AIKDMY+G KT V T G +E F Sbjct: 300 KDLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESF 359 Query: 20 SVVMGL 3 + +GL Sbjct: 360 PITVGL 365 Score = 32.0 bits (71), Expect(3) = 6e-77 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996 A++VLG +G + WWWN++V K E K Sbjct: 9 AKEVLGESKGFATHQKESWWWNEEVKAKKECCK 41 >gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea] Length = 1939 Score = 165 bits (417), Expect(5) = 4e-76 Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 1/189 (0%) Frame = -3 Query: 943 NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764 N E YK A+KE +AV+ A+ A+E LY L+ K G+K +YR+AK+RERR RDLD V+C+ Sbjct: 846 NWEKYKAAKKETKVAVSEARTRAYEGLYQSLDTKEGEKGIYRIAKSRERRTRDLDQVKCI 905 Query: 763 KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDI-VLGDLK*FGRY*NFGYCRSIKVEEV 587 KD+D +VL ++ I RW+ YF++L NE G K + LG L NF Y R I+ EV Sbjct: 906 KDKDREVLAQEEKINERWKSYFYELFNE-GQKTLPSLGRLCTREEDQNFNYYRRIRDFEV 964 Query: 586 KGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLY 407 K +++M GRA+GPD IP+E K G+ WLTKLF IL++ +MP+E + ST++ +Y Sbjct: 965 KEALKQMKNGRAVGPDNIPIEVWKGLGGKGINWLTKLFYEILRSKKMPDEWRKSTLVPIY 1024 Query: 406 KDKCDI*SC 380 + K DI SC Sbjct: 1025 RIKGDIQSC 1033 Score = 83.6 bits (205), Expect(5) = 4e-76 Identities = 38/111 (34%), Positives = 62/111 (55%) Frame = -1 Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249 +++EHL+T+ S + + IDF LLR+VD C +CK+IP E L TQ+++LV+D + ++ + Sbjct: 687 KRDEHLITYKSGMTSSQIDFFLLRRVDRKFCINCKIIPGESLTTQHRVLVLDFRVEQKLR 746 Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIR 1096 +R R +W + + R+ E W +G A MW M IR Sbjct: 747 KRHHTKNPRTRWWRMKGEEQRSFLRRVGEEAKWDGNGSAEEMWREMAEVIR 797 Score = 51.2 bits (121), Expect(5) = 4e-76 Identities = 22/54 (40%), Positives = 32/54 (59%) Frame = -3 Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424 +GGD N H+G GY +HGG G N G ++L+F+ F + IAN+ F K+ Sbjct: 635 LGGDLNGHVGREVTGYGSIHGGHGFGVINAEGKTILDFSSTFDLLIANTCFKKR 688 Score = 48.5 bits (114), Expect(5) = 4e-76 Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 1/126 (0%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 NYRGIKL+SHTMK ++ +K Sbjct: 1035 NYRGIKLMSHTMKLWGKG-----------------------------------DRTEVEK 1059 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTIGD-SEHF 21 RD + LW+ LE + V +AYIRAIKDMY+G T V T G +E F Sbjct: 1060 RD------------TRYQGRFLWKVLEKRRVRIAYIRAIKDMYEGATTSVKTQGGVTEEF 1107 Query: 20 SVVMGL 3 + +GL Sbjct: 1108 PIGIGL 1113 Score = 29.6 bits (65), Expect(5) = 4e-76 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = -2 Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKKNGVRE 981 A++ G +G + WWWN + EK++ K+ +E Sbjct: 800 AKESFGESKGIGPRDKESWWWNASIQEKIKIKRECFKE 837 >emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] Length = 990 Score = 111 bits (277), Expect(5) = 8e-72 Identities = 65/209 (31%), Positives = 109/209 (52%) Frame = -3 Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827 ++KK A+ K ES ++ Y +A++ + AV A+ + LY +LE G K Sbjct: 379 REKKAAFKKWQESNSPEDRLE----YTVAKRASKRAVARARSESLSPLYDKLETVEGQKL 434 Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDL 647 +Y+LA++R++ +D+ CV+D +L ++ RW+ YF +LLN + + Sbjct: 435 IYKLARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWRSYFQELLNTQHPCSLHHDPP 494 Query: 646 K*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNV 467 N G I ++E + +RRM G+A+GPD+IP+E KS G+ LT LFN Sbjct: 495 P------NLGLIAPITLDETRNCLRRMKNGKAVGPDDIPIEAWKSLGSLGVLMLTDLFNH 548 Query: 466 ILKTARMPEE*KWSTMILLYKDKCDI*SC 380 IL T +MP + + S + +YK + + C Sbjct: 549 ILNTGKMPHQWRLSFITPIYKGRGSVQDC 577 Score = 101 bits (252), Expect(5) = 8e-72 Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 1/126 (0%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 +YRGIKL+SHTMK + E+Q+GF P T +AI +R L+E YR+K+ Sbjct: 579 SYRGIKLMSHTMKLFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLMEAYREKR 638 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDSEHF 21 R LH+ F+DL+KA++ VP++ +W L KG+ AYI I+ MY + V T +GD+ F Sbjct: 639 RALHVAFLDLQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTRPF 698 Query: 20 SVVMGL 3 + +G+ Sbjct: 699 PITVGV 704 Score = 60.5 bits (145), Expect(5) = 8e-72 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Frame = -1 Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249 + +HL+T+ T ID+LL R+ G +CKVIP E L Q++LLVMD + K Sbjct: 238 KNSQHLITYKCGSHSTQIDYLLTRRCHMGRVTNCKVIPGESLTAQHRLLVMDFNV--TPK 295 Query: 1248 RRVMDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099 R+V + R RIKW L + + + ++ A WDR S I Sbjct: 296 RKVAEKRRPRIKWWLLNGPMQTDFLAEVKSHNLSTNTETAQEAWDRAQSAI 346 Score = 49.3 bits (116), Expect(5) = 8e-72 Identities = 27/69 (39%), Positives = 38/69 (55%) Frame = -3 Query: 1633 MLFVPSLRSFIFFMFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGM 1454 +L VPS + +VGGD N H+G + Y+ VHGGFG RN G ++L A + Sbjct: 175 LLAVPSTE-----LVLVGGDLNGHVGRAAEPYERVHGGFGHGLRNAEGENILRTCIASDL 229 Query: 1453 AIANSKFMK 1427 A+ N+ F K Sbjct: 230 AVVNTFFQK 238 Score = 40.8 bits (94), Expect(5) = 8e-72 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = -2 Query: 1091 RKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996 R+VLGV +G R + + WWWND+V E KK Sbjct: 351 RRVLGVSRGGRVIDKETWWWNDEVQEVTREKK 382 >emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase (reverse transcriptase) domain containing protein [Haemonchus contortus] Length = 816 Score = 111 bits (278), Expect(5) = 7e-69 Identities = 63/216 (29%), Positives = 116/216 (53%), Gaps = 6/216 (2%) Frame = -3 Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827 ++KK+AY + +++ + YK +++ A AV AK + LY +L+ + G+K Sbjct: 344 REKKLAYKRWQKTR----ALEDLAAYKTSKRLAKAAVAKAKNIEMDALYEKLDSREGEKF 399 Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665 ++RLAKAR R +D+ V+ V++ + +L + +RRRW+ YF +LLNE+ + Sbjct: 400 VFRLAKARHRATQDIRVVKAVRNSEGAILRKPGEVRRRWKEYFDRLLNEEFARENSSHSE 459 Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485 G +K + +EV+ + +M G+A GPD +P+E K+ G++WL Sbjct: 460 ATAGPIKLWTE------------DEVRKAIGKMKVGKATGPDGVPIEAWKALGEHGIKWL 507 Query: 484 TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377 T+ N + R+P+ + ST++ ++K K D C+ Sbjct: 508 TRFLNTVTAEGRIPDAWRRSTIVPIFKQKGDAMDCS 543 Score = 110 bits (275), Expect(5) = 7e-69 Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 1/130 (0%) Frame = -2 Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210 ++ NYRGI+L +HTMK V I E QFGFMPER TT+AI + R+++E+Y Sbjct: 540 MDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEGQFGFMPERSTTDAIFIARQIMEKY 599 Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GD 33 R+K+R ++ F+DLEKA++++P+EVLW L + V I +KDMYDG T + T G Sbjct: 600 REKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGQ 659 Query: 32 SEHFSVVMGL 3 + V +G+ Sbjct: 660 TGAIDVTVGV 669 Score = 56.2 bits (134), Expect(5) = 7e-69 Identities = 33/112 (29%), Positives = 53/112 (47%) Frame = -1 Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249 ++ +T+ S +T ID +L+R+ KD KV+P E L TQ++ L+ D+ I KK Sbjct: 203 KRRSQKVTYSSGGNETEIDHVLVRRSSLKTVKDIKVLPGEELATQHRPLLADIAIELPKK 262 Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIRG 1093 R +R RI+W L + + E+++ G G W I G Sbjct: 263 SRTRTER-RIRWWKLHRLERENLKEKILEVGLPDPEGPIQQTWSNAVKVILG 313 Score = 47.0 bits (110), Expect(5) = 7e-69 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = -3 Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424 + GD N H+GS +G + VHGG G+ RN G +L+ A A +A+ ++ F K+ Sbjct: 151 IAGDMNGHVGSERRGLERVHGGRGIGVRNEEGERVLDLAMAHDLAVCSTFFAKR 204 Score = 28.1 bits (61), Expect(5) = 7e-69 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -2 Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996 A++ LG +G ++ W+WND+V + KK Sbjct: 315 AKETLGETRGGLRGNKEAWFWNDEVQRVVREKK 347 >emb|CCH50954.1| T1.2 [Malus x robusta] Length = 554 Score = 137 bits (346), Expect(3) = 1e-64 Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 1/126 (0%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 NYRGIKL+SHTMK + +NQF FMP T EAI+L+R+L+E+YR K Sbjct: 259 NYRGIKLMSHTMKLLARVIEHRLRQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRDGK 318 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GDSEHF 21 DLHMVFIDLEK Y++VP+++LWR LE KGV VAYI+AIKDMYDG KT V T G E F Sbjct: 319 NDLHMVFIDLEKVYDRVPRDILWRILEKKGVRVAYIQAIKDMYDGAKTAVRTYEGQIESF 378 Query: 20 SVVMGL 3 + + L Sbjct: 379 PITVRL 384 Score = 125 bits (314), Expect(3) = 1e-64 Identities = 76/199 (38%), Positives = 113/199 (56%) Frame = -3 Query: 976 VESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARER 797 V++K + +K + LYK E AK A KK D +Y+LAK RE+ Sbjct: 70 VQTKVKAKKECCKALYKDMTDENGERYRRAKQEA---------KKALD--IYKLAKVREK 118 Query: 796 RARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFG 617 + RDL+ VRC+KDED KVL + ++ R + YFH L NE + LG+L Y N+ Sbjct: 119 KTRDLNQVRCIKDEDGKVLATENAVKDRLRDYFHNLFNEGHEWSTSLGELSNSEEYRNYF 178 Query: 616 YCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE 437 + R I+ EEV +++M +A+GP++IP++ K G+ WLT LFN ILK +M E Sbjct: 179 FYRRIRKEEVVVALKKMKHIKAVGPNDIPIKVWKVLGETGITWLTDLFNRILKMKKMSNE 238 Query: 436 *KWSTMILLYKDKCDI*SC 380 + ST++ +YK+K DI +C Sbjct: 239 WRNSTLVPIYKNKGDIQNC 257 Score = 35.0 bits (79), Expect(3) = 1e-64 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -2 Query: 1097 GARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996 G R+V G+ +G+ WWWN++V K++AKK Sbjct: 48 GIRRVQGLCSTPKGIF---WWWNEEVQTKVKAKK 78 >gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus] Length = 1253 Score = 103 bits (256), Expect(4) = 3e-63 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%) Frame = -3 Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875 GG + W + E K +KW +R Y A++ + AV A+ Sbjct: 626 GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 685 Query: 874 FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695 LY LE G K +Y+LA+AR++ +D+ VKD +L A ++ RW+ YF Sbjct: 686 LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 745 Query: 694 KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515 +LLN + + N G I +E + +RRM +A+GPD+IP+E K Sbjct: 746 ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 799 Query: 514 SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380 S G+ LT LFN +L T MP + ++S + +YK + + C Sbjct: 800 SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 844 Score = 102 bits (254), Expect(4) = 3e-63 Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 +YRG+K++SHTMK + E Q+GF P T +AI IR L+E YR+K+ Sbjct: 846 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 905 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMY-DGVKTRVGTIGDSEHF 21 R LH+ F+DL+KA++ VP++ +W L KG+ AYI I+DMY D V +GD++ F Sbjct: 906 RALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPF 965 Query: 20 SVVMGL 3 + +GL Sbjct: 966 PISVGL 971 Score = 57.8 bits (138), Expect(4) = 3e-63 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Frame = -1 Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240 +HL+T+ S T ID+LL R+ +CKVIP E L Q++LLVMD + +KK V Sbjct: 508 QHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 565 Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099 + R RI+W L + ++ ++ A +WDR S I Sbjct: 566 AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 613 Score = 50.8 bits (120), Expect(4) = 3e-63 Identities = 24/56 (42%), Positives = 33/56 (58%) Frame = -3 Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427 + IVGGD N H+G + +D VHGGFG RN G ++L A +A+ N+ F K Sbjct: 450 VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 505 >gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus] Length = 985 Score = 103 bits (256), Expect(4) = 3e-63 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%) Frame = -3 Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875 GG + W + E K +KW +R Y A++ + AV A+ Sbjct: 358 GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 417 Query: 874 FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695 LY LE G K +Y+LA+AR++ +D+ VKD +L A ++ RW+ YF Sbjct: 418 LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 477 Query: 694 KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515 +LLN + + N G I +E + +RRM +A+GPD+IP+E K Sbjct: 478 ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 531 Query: 514 SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380 S G+ LT LFN +L T MP + ++S + +YK + + C Sbjct: 532 SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 576 Score = 102 bits (254), Expect(4) = 3e-63 Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 +YRG+K++SHTMK + E Q+GF P T +AI IR L+E YR+K+ Sbjct: 578 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 637 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMY-DGVKTRVGTIGDSEHF 21 R LH+ F+DL+KA++ VP++ +W L KG+ AYI I+DMY D V +GD++ F Sbjct: 638 RALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPF 697 Query: 20 SVVMGL 3 + +GL Sbjct: 698 PISVGL 703 Score = 57.8 bits (138), Expect(4) = 3e-63 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Frame = -1 Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240 +HL+T+ S T ID+LL R+ +CKVIP E L Q++LLVMD + +KK V Sbjct: 240 QHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 297 Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099 + R RI+W L + ++ ++ A +WDR S I Sbjct: 298 AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 345 Score = 50.8 bits (120), Expect(4) = 3e-63 Identities = 24/56 (42%), Positives = 33/56 (58%) Frame = -3 Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427 + IVGGD N H+G + +D VHGGFG RN G ++L A +A+ N+ F K Sbjct: 182 VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 237 >gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] Length = 517 Score = 132 bits (331), Expect(3) = 4e-62 Identities = 66/126 (52%), Positives = 87/126 (69%), Gaps = 1/126 (0%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 NYRGIKL+SHTMK + +NQFGFM R T EAI+L++R++E+YR K Sbjct: 218 NYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDK 277 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDSEHF 21 +DLH+VF DLEK Y++VP+E+LW+ LE K V +AYIRAIKDMY+ T V T G +E F Sbjct: 278 KDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDF 337 Query: 20 SVVMGL 3 + +GL Sbjct: 338 PITIGL 343 Score = 125 bits (313), Expect(3) = 4e-62 Identities = 74/193 (38%), Positives = 106/193 (54%) Frame = -3 Query: 958 MEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLD 779 +E W + YKIARKEA V+ A+ AFE LY L K G+K +Y+L+K RER+ RDLD Sbjct: 57 VETW---DKYKIARKEAKKVVSEARTQAFEGLYQSLGTKEGEKSIYKLSKGRERKTRDLD 113 Query: 778 HVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIK 599 V+C+KDE+ +VL+ + +G N+ Y R I+ Sbjct: 114 QVKCIKDEEGRVLVR----------------HRRGGP--------------NYNYYRRIQ 143 Query: 598 VEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTM 419 EV+ ++RM A+GPD IP+E KS G WL LFN I++T +M +E + ST+ Sbjct: 144 EHEVREALKRMGSDEAVGPDNIPIEVWKSLGDRGTVWLANLFNEIIRTKKMSDEWRRSTL 203 Query: 418 ILLYKDKCDI*SC 380 I + K+K DI +C Sbjct: 204 IPIDKNKGDIQNC 216 Score = 32.7 bits (73), Expect(3) = 4e-62 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -2 Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKKNGVREIGR 972 A++ LG +G + WWWND V K+ K++ ++ R Sbjct: 13 AKETLGESRGFGPRGKESWWWNDNVQSKVRIKRDCFKDWSR 53 >gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 996 Score = 107 bits (268), Expect(4) = 2e-60 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 6/226 (2%) Frame = -3 Query: 1057 VSIEGTGGGMIKFMRRWKQKKMAYAKLVESKDEMEKWTN------RELYKIARKEANLAV 896 +++ T GG I W + + + KD + W + +E YK +KE V Sbjct: 354 ITLGRTKGGRINNKETWWWTEAVQNAIQKKKDAFKTWQSTQTSEDQERYKRIKKETKKIV 413 Query: 895 TAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRR 716 + A + +Y +LE K G K +++LAK R RD R VKD + ++L D+ + Sbjct: 414 AVERAVALKTMYEQLETKEGQKCIFKLAKQRCWSTRDPTRCRAVKDPNGELLYGDSDVLS 473 Query: 715 RWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDE 536 W Y+ +LLN + ++ N G I+ E K + +M +A GPD Sbjct: 474 AWHQYYEQLLNPTQAAIQLTKVVR------NIGLIPPIRPNEFKMALEKMPNKKATGPDG 527 Query: 535 IPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDK 398 IPVE K G+E LTKLFN +L++++MP + ST++ +YK K Sbjct: 528 IPVEAWKCLREHGIETLTKLFNCVLRSSKMPAAWRLSTIVPIYKGK 573 Score = 92.4 bits (228), Expect(4) = 2e-60 Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Frame = -2 Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207 E NYRGIKLLSHTMK + +N +GF+ TT+ + + + E+YR Sbjct: 578 ECSNYRGIKLLSHTMKLYERVIDSRLRSECSLSKNHYGFVQGLSTTDPMFALNTIAEEYR 637 Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDS 30 +K R L++ F+D+EKA+++VP++ +W L K V Y+ I DMY ++ V T +G + Sbjct: 638 EKLRPLYVAFLDMEKAFDRVPRDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQT 697 Query: 29 EHFSVVMGL 3 + +V GL Sbjct: 698 KPIAVAEGL 706 Score = 54.7 bits (130), Expect(4) = 2e-60 Identities = 31/110 (28%), Positives = 54/110 (49%) Frame = -1 Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249 +K EH +T+ S + ID++L+ + G +CKVIP E +TQ++++VMD+ +K K Sbjct: 240 KKPEHTITYKSGQTTSQIDYILVNRAYIGRVTNCKVIPGECAVTQHRIVVMDMLFKKTSK 299 Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099 + KW +L E L + + D +WD ++ I Sbjct: 300 TKTSHTPEITKWWNLKGDKIPEFCNHL-SNLKVDTELDIDNIWDHLSKSI 348 Score = 50.1 bits (118), Expect(4) = 2e-60 Identities = 25/55 (45%), Positives = 32/55 (58%) Frame = -3 Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424 ++GGD N HIG+ K + VHGG G N G +L A AF +AI N+ F KK Sbjct: 187 LLGGDLNGHIGTENKAFKRVHGGHGFGTINEEGEVILSTAAAFDLAITNTFFAKK 241 >gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus] Length = 1470 Score = 103 bits (256), Expect(4) = 6e-58 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%) Frame = -3 Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875 GG + W + E K +KW +R Y A++ + AV A+ Sbjct: 1144 GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 1203 Query: 874 FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695 LY LE G K +Y+LA+AR++ +D+ VKD +L A ++ RW+ YF Sbjct: 1204 LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 1263 Query: 694 KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515 +LLN + + N G I +E + +RRM +A+GPD+IP+E K Sbjct: 1264 ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 1317 Query: 514 SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380 S G+ LT LFN +L T MP + ++S + +YK + + C Sbjct: 1318 SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 1362 Score = 82.4 bits (202), Expect(4) = 6e-58 Identities = 38/91 (41%), Positives = 57/91 (62%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 +YRG+K++SHTMK + E Q+GF P T +AI IR L+E YR+K+ Sbjct: 1364 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 1423 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGV 105 R LH+ F+DL+KA++ VP++ +W L KG+ Sbjct: 1424 RALHVAFLDLQKAFDCVPRQCIWWALRFKGI 1454 Score = 60.1 bits (144), Expect(4) = 6e-58 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Frame = -1 Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240 +HL+T+ S T ID+LL R+ G +CKVIP E L Q++LLVMD + +KK V Sbjct: 1026 QHLITYKSGSHSTQIDYLLTRRCHIGKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 1083 Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099 + R RI+W L + ++ ++ A +WDR S I Sbjct: 1084 AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 1131 Score = 50.8 bits (120), Expect(4) = 6e-58 Identities = 24/56 (42%), Positives = 33/56 (58%) Frame = -3 Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427 + IVGGD N H+G + +D VHGGFG RN G ++L A +A+ N+ F K Sbjct: 968 VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 1023 >emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase (reverse transcriptase) domain containing protein [Haemonchus contortus] Length = 854 Score = 97.1 bits (240), Expect(4) = 4e-54 Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 1/210 (0%) Frame = -3 Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827 ++KK +A L+E D+ N + Y+IA+KEA AV + K A F L +LE + G++ Sbjct: 352 EKKKQYHAFLIEKTDD-----NWQRYQIAKKEAKKAVASEKAAHFAELNKKLESREGERY 406 Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLN-EKGDKDIVLGD 650 +YRLAK R R+ D++ + DE+ ++L + + RW+ YF + E I Sbjct: 407 IYRLAKTRNRQTEDIEKFFGINDENGRLLTDRRQVLERWREYFANISTVEFAHPAIPCAP 466 Query: 649 LK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFN 470 G + I V E +++M G+A GPD++ + KS WLT+ FN Sbjct: 467 PV-------HGPVQKITVSETITALKKMKSGKATGPDDVAADLWKSKGWNPAGWLTEFFN 519 Query: 469 VILKTARMPEE*KWSTMILLYKDKCDI*SC 380 + ++PE + ST I ++K K + C Sbjct: 520 QAVAEKKVPESWQQSTTIPIWKKKGSLGDC 549 Score = 78.2 bits (191), Expect(4) = 4e-54 Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 1/125 (0%) Frame = -2 Query: 374 YRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKKR 195 YR I+LLSH+MK V + NQ F+ T +AIH L+E++ +K+R Sbjct: 552 YRPIRLLSHSMKFFERIVDSRIRDIVELITNQCVFVAGCSTIDAIHATSLLLEKHHEKRR 611 Query: 194 DLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVG-TIGDSEHFS 18 +H+ F+DLEKA+ +VP++V+W L GV +I ++ +Y K+RV G F Sbjct: 612 PIHLAFLDLEKAFGRVPRDVIWYALRQHGVPEEHIEWVRILYTSPKSRVQMAAGTLTEFP 671 Query: 17 VVMGL 3 + +G+ Sbjct: 672 ISVGV 676 Score = 55.8 bits (133), Expect(4) = 4e-54 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%) Frame = -1 Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEK- 1252 +++ HL+TF S +T IDF+L+R D GL D K +P E + TQ++ L+ L+I K Sbjct: 212 KRDSHLITFYSGENRTQIDFVLVRHRDQGLVTDAKTVPYETVATQHRPLICTLKIAPPKP 271 Query: 1251 KRRVMDDRLRIKWGSL-----TMASAKEMGERLMAEGAWGSSGDAI 1129 K RIKW L T+ S+ + + W + +AI Sbjct: 272 KLAERSGPARIKWWRLKEKEETVVSSILLPAVTTVDETWKGAAEAI 317 Score = 52.4 bits (124), Expect(4) = 4e-54 Identities = 24/55 (43%), Positives = 34/55 (61%) Frame = -3 Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424 +V GD N H+G+ GY HGGFG RN G +LE+A + +AI N++F K+ Sbjct: 160 VVAGDLNGHVGATKDGYS-CHGGFGYGSRNTDGERILEYADSHNLAIVNTRFRKR 213 >ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria chalumnae] Length = 1500 Score = 125 bits (315), Expect(2) = 2e-53 Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 6/219 (2%) Frame = -3 Query: 1018 MRRWKQKKMAYAKLVESKDEMEKWTNR------ELYKIARKEANLAVTAAKMAAFERLYV 857 MR W + K + K + ++W + Y I +++ V AK+ A+ LY Sbjct: 224 MRWWNEDVQEVTK--DKKIKFKRWQKTRQKEDLDEYVIVKRQTKRVVAKAKVMAYVELYQ 281 Query: 856 ELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK 677 +L+ + G+K +YR+A+ARER+ RD D V+ +KD + +V++++ ++ RW+ YF KLLNE+ Sbjct: 282 KLDSREGEKMVYRIARARERKKRDFDQVKVIKDSEGQVILDENKVKERWREYFEKLLNEE 341 Query: 676 GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAG 497 ++ + L N I EEV +++M +A GPDE+P+E K G Sbjct: 342 NPREELPEGLP-----ENHTAVEGITKEEVIQAMKKMKNRKATGPDEVPIETFKEMKEMG 396 Query: 496 LEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380 L LT+L+ I + +MP E + ST++ ++K K D+ C Sbjct: 397 LVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRKGDVQDC 435 Score = 114 bits (284), Expect(2) = 2e-53 Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 1/129 (0%) Frame = -2 Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207 + +NYRGI L+SH MK V I ENQFGF R T +AI ++ L+E+Y+ Sbjct: 434 DCNNYRGIALMSHAMKLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYK 493 Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRV-GTIGDS 30 +K++DLHMVF+DLEKAY++VP+ ++W C+ +G+ YIR +KDMY G K V G + Sbjct: 494 EKRKDLHMVFVDLEKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTT 553 Query: 29 EHFSVVMGL 3 F V +G+ Sbjct: 554 TSFPVKVGV 562 Score = 47.4 bits (111), Expect(2) = 1e-09 Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Frame = -1 Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249 ++E +L+T+ S ++ ID++L+++ K+CKVI E L Q++LLVMD + KK Sbjct: 118 KQERYLVTYRSGNTQSQIDYILVKRQLLKRVKNCKVILGECLTGQHRLLVMDYKTECAKK 177 Query: 1248 RRV-MDDRLRIKWGSL 1204 + ++ +IKW L Sbjct: 178 NKAKLEMERKIKWWCL 193 Score = 45.1 bits (105), Expect(2) = 1e-09 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = -3 Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424 IVG D N +G GY+ HGG G +RN G ++L A+A +A+ N+ F K+ Sbjct: 65 IVGVDLNGRVGRDRCGYEGNHGGQGYGERNTEGENVLRMAQAHNLAVVNTYFKKQ 119 >gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] Length = 562 Score = 142 bits (357), Expect(2) = 2e-53 Identities = 73/126 (57%), Positives = 89/126 (70%), Gaps = 1/126 (0%) Frame = -2 Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198 NYRGIKL++HTMK + ENQFGFM R TEAI+L+RR++E+YR K Sbjct: 130 NYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNK 189 Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTIGD-SEHF 21 RDLHMVFIDLEKAY++VP+EVLW+ LE V +AYIRAIKDMYDG T V T G +E F Sbjct: 190 RDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEF 249 Query: 20 SVVMGL 3 + +GL Sbjct: 250 PIGIGL 255 Score = 97.8 bits (242), Expect(2) = 2e-53 Identities = 54/127 (42%), Positives = 76/127 (59%) Frame = -3 Query: 760 DEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKG 581 D+D +VL ++ I RW+ YF++L NE LG L + NF Y R I+ EVK Sbjct: 2 DKDGEVLAQEEKINERWKSYFYELFNEGQKTLSSLGRLCTREKDKNFDYYRRIRDFEVKE 61 Query: 580 DVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKD 401 + +M RA+GPD IP+E K + WLTKLFN IL++ +MP E + ST++ +YK+ Sbjct: 62 ALNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKN 121 Query: 400 KCDI*SC 380 K DI SC Sbjct: 122 KGDIQSC 128 >emb|CDJ81301.1| unnamed protein product [Haemonchus contortus] Length = 499 Score = 106 bits (264), Expect(3) = 4e-46 Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 6/216 (2%) Frame = -3 Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827 ++KK+AY + +++ + YK +++ A AV AK + LY +L+ + G+K Sbjct: 129 REKKLAYERWQKTR----ALEDLAAYKTSKRLAKAAVAKAKNMEMDALYEKLDSREGEKF 184 Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665 ++RLAKAR R +D+ V+ V++ + +L + +RRRW+ YF K LNE+ + Sbjct: 185 VFRLAKARHRATQDIGVVKSVRNSEGAILRKPGEVRRRWKEYFDKFLNEEFARENSSHLE 244 Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485 G +K + +EV+ + +M G+A GP +P+E K+ G++WL Sbjct: 245 ETAGPIK-------LKMKCDVTEDEVRIAIGKMKVGKATGPGGVPIEAWKALGEHGIKWL 297 Query: 484 TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377 TK N + R+P+ + ST++ ++K K D C+ Sbjct: 298 TKFLNTVTAEGRIPDAWRRSTIVPIFKRKGDPMDCS 333 Score = 102 bits (254), Expect(3) = 4e-46 Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%) Frame = -2 Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210 ++ NYRGI+L +HTMK V I E FGFMPER TT+AI + R+++ +Y Sbjct: 330 MDCSNYRGIRLTAHTMKLYERMVDSRLRGLVPISEKLFGFMPERSTTDAIFIARQIMGKY 389 Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GD 33 R+ +R ++ F+DLEKA++++P+EVLW L + V I +KDMYDG T + T G Sbjct: 390 REMRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGH 449 Query: 32 SEHFSVVMGL 3 + V +G+ Sbjct: 450 TGAIDVTVGV 459 Score = 27.3 bits (59), Expect(3) = 4e-46 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = -2 Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996 A++ LG +G + W+WND+V + KK Sbjct: 100 AKETLGETRGGLRGDKEAWFWNDEVQRVVREKK 132 >emb|CDJ90886.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase (reverse transcriptase) domain containing protein [Haemonchus contortus] Length = 520 Score = 108 bits (270), Expect(3) = 7e-41 Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 6/216 (2%) Frame = -3 Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827 ++KK+AY + +++ N YK +++ A AV A + LY +L+ + G+K Sbjct: 202 REKKLAYKRWQKTR----ALENLAAYKTSKRLAKAAVAKANKMEMDALYGKLDSREGEKF 257 Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665 ++RLAKAR R +D+ V+ V++ + +L + +RRRW+ YF +LLNE+ + Sbjct: 258 VFRLAKARNRATQDIGVVKSVRNSEGAILRKPGEVRRRWKEYFDRLLNEEFARGNSSHLE 317 Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485 G +K + +EV+ + +M G+A GPD +P+E K+ G++WL Sbjct: 318 ATAGPIKLWTE------------DEVRIAIGKMKVGKATGPDGVPIEAWKALGEHGIKWL 365 Query: 484 TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377 T+ N + R+P+ + ST+ ++K K D C+ Sbjct: 366 TRFLNTVTAKGRIPDAWRRSTIAPIFKQKGDAMDCS 401 Score = 83.2 bits (204), Expect(3) = 7e-41 Identities = 38/84 (45%), Positives = 59/84 (70%) Frame = -2 Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210 ++ NYRGI+L +HTMK V I E QFGFMPER TT+AI + R+++E+Y Sbjct: 398 MDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEEQFGFMPERSTTDAIFIARQIMEKY 457 Query: 209 RQKKRDLHMVFIDLEKAYNKVPKE 138 R+K+R ++ F+DLEKA++++P++ Sbjct: 458 REKRRPCYLAFLDLEKAFDRLPRK 481 Score = 26.6 bits (57), Expect(3) = 7e-41 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996 A++ LG QGS + W+ ND+V + + KK Sbjct: 173 AKETLGETQGSSRGDKEAWFGNDEVQQVVREKK 205 >ref|XP_005753988.1| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Pundamilia nyererei] Length = 569 Score = 100 bits (249), Expect(2) = 1e-40 Identities = 65/210 (30%), Positives = 104/210 (49%) Frame = -3 Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827 K+KK A ++S+ + + + Y+ R A AV AAK + +++LY EL+ GG K Sbjct: 60 KEKKSALKVWLKSRSDGDY----QQYRALRSAAKKAVAAAKASHYDQLYEELDTPGGANK 115 Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDL 647 +YRLA +R R +D+ V+ +KD + + L + I RW YF + N + + Sbjct: 116 IYRLASSRHRATQDIGQVKHIKDANHQTLRDPPAILNRWSEYFSDICNVEFPHQPI---- 171 Query: 646 K*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNV 467 G I ++EV+ V+ M G+A GPD+IP E K R G L LFN Sbjct: 172 --HSAPPVPGPVPPITIKEVEAAVKNMKNGKATGPDDIPAEVWKLLGRQGALVLASLFNS 229 Query: 466 ILKTARMPEE*KWSTMILLYKDKCDI*SCT 377 I++ +P S + ++K K D+ C+ Sbjct: 230 IIRDGTVPAAWSTSITVPIWKGKGDVAECS 259 Score = 96.3 bits (238), Expect(2) = 1e-40 Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 1/129 (0%) Frame = -2 Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207 E NYR I+LLSHTMK V + NQ GF+ R TT+AIH R L+E++R Sbjct: 257 ECSNYRPIRLLSHTMKVFERIIDARMREIVNLTPNQCGFIRGRGTTDAIHAARLLLEKHR 316 Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRV-GTIGDS 30 +K + +HM F+DLEKA+++VP +++W L+ GV AY++ K +Y V + V +G S Sbjct: 317 EKSKTIHMAFLDLEKAFDRVPHDLIWHSLQSHGVPEAYVKWTKLLYRQVTSVVRSPVGTS 376 Query: 29 EHFSVVMGL 3 F++ +G+ Sbjct: 377 PPFNINVGI 385 >emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing protein [Haemonchus contortus] Length = 1526 Score = 103 bits (258), Expect(2) = 5e-40 Identities = 51/116 (43%), Positives = 75/116 (64%) Frame = -2 Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210 ++ NYRGI+L +HTMK V I E QFGFMP R TT+AI + R+++ +Y Sbjct: 603 MDCSNYRGIRLAAHTMKLYERLVDSRLRELVPISEKQFGFMPGRSTTDAIFITRQVMGKY 662 Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT 42 R+K+R ++ F+DLEKA++++P++VLWR L + V I +KDMYDG T + T Sbjct: 663 REKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRT 718 Score = 90.9 bits (224), Expect(2) = 5e-40 Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 6/216 (2%) Frame = -3 Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827 +QKK AY + ++ + Y+ +++ A AV AK + LY L+ + G+K Sbjct: 407 RQKKSAYKRWQRTRAPEDL----SAYRTSKRLAKAAVAKAKNTEMDALYEILDSREGEKF 462 Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665 ++RLAKAR +D+ V+ VK+ + +L W+ YF LLNE+ + Sbjct: 463 VFRLAKARHLATQDIGVVKSVKNSEGAILTXXXXXXXXWEEYFDGLLNEEFARQNSSQLE 522 Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485 G + + EV+ + +M G+A GPD +P++ K+ G++WL Sbjct: 523 ATAGPINLWTE------------NEVRRAMGKMKVGKATGPDGVPIKAWKALGEHGVKWL 570 Query: 484 TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377 T+ N + R+P+ + ST++ ++K K D C+ Sbjct: 571 TRFLNTVTAKGRIPDAWRRSTIVPIFKQKGDAMDCS 606 Score = 80.9 bits (198), Expect(2) = 1e-14 Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 6/185 (3%) Frame = -3 Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827 +QKK AY + +++ + Y+ +++ A AV AK + LY +L+ + G+K Sbjct: 139 RQKKSAYKRWQKTRAPEDL----AAYRTSKRLAKAAVAKAKNTEMDALYEKLDSREGEKF 194 Query: 826 LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665 ++RLAKAR R RD+ V+ V++ + +L + +RRRW+ YF LLNE+ + Sbjct: 195 VFRLAKARHRATRDIGVVKSVRNSEGAILRKPGEVRRRWEEYFDGLLNEEFARQNSSQLE 254 Query: 664 IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485 G + + EV+ + +M G+A GPD +P+E K+ G++ + Sbjct: 255 ATAGPINLWTE------------NEVRRAMGKMKVGKATGPDGVPIEAWKALGEYGVKCM 302 Query: 484 TKLFN 470 + ++ Sbjct: 303 EEKYH 307 Score = 28.5 bits (62), Expect(2) = 1e-14 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = -2 Query: 1094 ARKVLGVLQGSRGVHRGD---WWWNDKVHEKMEAKKNGVR 984 A++ LG +RG RGD W+WND+V + KK+ + Sbjct: 110 AKETLGE---TRGGFRGDKEAWFWNDEVQRVVRQKKSAYK 146 >emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing protein [Haemonchus contortus] Length = 432 Score = 101 bits (251), Expect(2) = 5e-39 Identities = 50/116 (43%), Positives = 74/116 (63%) Frame = -2 Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210 ++ N RGI+L +HT+K V I E+Q GFMPER TT+AI + R+++E+Y Sbjct: 157 MDCSNCRGIRLAAHTIKLYERLVDSRLRDLVPISEDQIGFMPERSTTDAIFIARQIMEKY 216 Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT 42 R K+R ++ F+DLEKA++++P+EVLW L + V I +KDMYDG T + T Sbjct: 217 RGKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRT 272 Score = 90.5 bits (223), Expect(2) = 5e-39 Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 6/171 (3%) Frame = -3 Query: 871 ERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHK 692 + LY +L+ + G+K ++RLAKAR R +D+ V+ V++ + +L + +RRRW+ YF + Sbjct: 2 DALYEKLDSREGEKFVFRLAKARHRATQDIGVVKSVRNSEGAILRKPGKVRRRWKEYFDR 61 Query: 691 LLNEK------GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIP 530 LLNE+ + G +K + +EV+ + +M G+A GPD +P Sbjct: 62 LLNEEFARENSSHLEATAGPIKLWTE------------DEVRIAIGKMKVGKATGPDGVP 109 Query: 529 VEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377 +E ++ G++WLT+ N + R+P+ + S + ++K K D C+ Sbjct: 110 IEAWEALGEHGIKWLTRFLNTVSAEGRIPDAWRRSAIDPIFKQKGDAMDCS 160 >emb|CDJ93360.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing protein [Haemonchus contortus] Length = 506 Score = 96.3 bits (238), Expect(2) = 2e-37 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 12/234 (5%) Frame = -3 Query: 1042 TGGGMIKFMRRWKQKKMAYAKLVESKDEMEKWTNREL------YKIARKEANLAVTAAKM 881 T GG W + + K ++W Y+ +++ A AV AK Sbjct: 193 TRGGFRGDKEAWFWNDEVQRVVRQKKSACKRWQRTRAPEDLSAYRTSKRLAKAAVAKAKN 252 Query: 880 AAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFY 701 + LY +L+ + G K ++RLAKAR R +D+ V+ V++ + +L + +RRRW+ Y Sbjct: 253 TEMDALYEKLDTREGGKFVFRLAKARHRATQDIGVVKSVRNSEGAILRKPGDVRRRWKEY 312 Query: 700 FHKLLNEK------GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPD 539 F L NE+ + G + + EV+ + +M G+A G D Sbjct: 313 FDGLFNEEFARQNSSQLEATAGPINLWTE------------NEVRRAMGKMKVGKATGSD 360 Query: 538 EIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377 +P+E K+ G++WLT+ N + R+P+ + ST++ ++K K D C+ Sbjct: 361 GVPIEAWKALGEHGVKWLTRFLNTVTAERRIPDAWRRSTIVPIFKQKGDAMECS 414 Score = 90.1 bits (222), Expect(2) = 2e-37 Identities = 42/90 (46%), Positives = 62/90 (68%) Frame = -2 Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210 +E NYRGI+L +HTMK V I QFGFMPER TT+AI + R+++E+Y Sbjct: 411 MECSNYRGIRLTAHTMKLYERLVDSRLRELVPISHEQFGFMPERSTTDAIFIARQVMEKY 470 Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCL 120 R+K+ ++ F+DLEKA++++P++VLWR L Sbjct: 471 REKRGPCYIAFLDLEKAFDRLPRQVLWRAL 500