BLASTX nr result

ID: Atropa21_contig00011293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00011293
         (3753 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               164   6e-97
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   161   6e-77
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   165   4e-76
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   111   8e-72
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir...   111   7e-69
emb|CCH50954.1| T1.2 [Malus x robusta]                                137   1e-64
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   103   3e-63
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   103   3e-63
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   132   4e-62
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]       107   2e-60
gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   103   6e-58
emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-dir...    97   4e-54
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...   125   2e-53
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         142   2e-53
emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]        106   4e-46
emb|CDJ90886.1| Endonuclease exonuclease phosphatase and RNA-dir...   108   7e-41
ref|XP_005753988.1| PREDICTED: RNA-directed DNA polymerase from ...   100   1e-40
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...   103   5e-40
emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcripta...   101   5e-39
emb|CDJ93360.1| RNA-directed DNA polymerase (reverse transcripta...    96   2e-37

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  164 bits (415), Expect(4) = 6e-97
 Identities = 82/188 (43%), Positives = 123/188 (65%)
 Frame = -3

Query: 943  NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764
            N E Y+ A++EA  AV  AK+AA++ +Y  L+ K G+  +Y+LA+ARE++ RDL+ VRC+
Sbjct: 447  NGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCI 506

Query: 763  KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVK 584
            KDED KVL  +  ++ RW+ YFH L NE  ++   L +L       N+ + R I+ EEV 
Sbjct: 507  KDEDGKVLATENAVKDRWRGYFHNLFNEGHERSASLWELSNSEECRNYSFYRRIRKEEVV 566

Query: 583  GDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYK 404
              +++M   +AIGPD+IP+E  K     G+ WLT LFN ILKT +MP E + ST++ +YK
Sbjct: 567  VALKKMKHRKAIGPDDIPIEVWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYK 626

Query: 403  DKCDI*SC 380
            +K D+ +C
Sbjct: 627  NKGDVQNC 634



 Score =  115 bits (287), Expect(4) = 6e-97
 Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
 Frame = -2

Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
           NYRGIKL+SHTMK               + +NQFGFMP R T EAI+L+RRL+E+YR  K
Sbjct: 636 NYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGK 695

Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAY--IRAIKDMYDGVKTRV 48
           +DLHMVFIDLEKAY++VP+++LWR LE KG ++    I  I +  +GV  ++
Sbjct: 696 KDLHMVFIDLEKAYDRVPRDILWRILEKKGCMLFADDIVLIDETQEGVNAKL 747



 Score = 96.3 bits (238), Expect(4) = 6e-97
 Identities = 49/122 (40%), Positives = 74/122 (60%)
 Frame = -1

Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
            ++EEH++T+ S  +KT IDFLL+RK D   CKDCKVIP E +  Q++LLVMD+ I++ ++
Sbjct: 288  KREEHVITYKSGSSKTQIDFLLMRKGDRITCKDCKVIPGESVANQHRLLVMDVLIKRVRQ 347

Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIRG*KSARSFA 1069
            +       R +W +L         E+++ +  W   G+A  MWD M SCIR  K A+   
Sbjct: 348  KNKTWKCPRTRWWNLKEEKQAIFKEKVITQCVWDREGEASQMWDSMASCIR--KVAKEVL 405

Query: 1068 GK 1063
            G+
Sbjct: 406  GE 407



 Score = 52.0 bits (123), Expect(4) = 6e-97
 Identities = 22/54 (40%), Positives = 33/54 (61%)
 Frame = -3

Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
            +GGD N H+G     Y   HGG G  +RN  G ++L+FA A+ + +AN+ F K+
Sbjct: 236  IGGDLNGHVGRETGNYRGFHGGHGFGERNEDGEAILDFAMAYDLFLANTFFKKR 289


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score =  161 bits (407), Expect(3) = 6e-77
 Identities = 79/188 (42%), Positives = 122/188 (64%)
 Frame = -3

Query: 943 NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764
           N E Y+ A++EA  AV  AK+AA++ +Y  L+ K G+  +Y+LA+ARE++ RDL+ VRC+
Sbjct: 51  NGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCI 110

Query: 763 KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVK 584
           KDED KVL  +  ++ +W+ YFH L NE  ++   LG+L       N+ + R I+ EEV 
Sbjct: 111 KDEDGKVLATENAVKDKWRGYFHNLFNEGHERSASLGELSNSEECRNYSFYRRIRKEEVV 170

Query: 583 GDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYK 404
             +++M   +A+GPD+IP+E  K     G+ WL  LFN ILKT +MP E + S ++ +YK
Sbjct: 171 VALKKMKHRKAVGPDDIPIEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYK 230

Query: 403 DKCDI*SC 380
           +K D+ +C
Sbjct: 231 NKGDVQNC 238



 Score =  146 bits (368), Expect(3) = 6e-77
 Identities = 73/126 (57%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
           NYRGIKL+SHTMK               + +NQFGFMP R T EAI+L+RRL+E+YR  K
Sbjct: 240 NYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGK 299

Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GDSEHF 21
           +DLHMVFIDLEKAY++V ++++WR LE KGV VAYI+AIKDMY+G KT V T  G +E F
Sbjct: 300 KDLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESF 359

Query: 20  SVVMGL 3
            + +GL
Sbjct: 360 PITVGL 365



 Score = 32.0 bits (71), Expect(3) = 6e-77
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
            A++VLG  +G     +  WWWN++V  K E  K
Sbjct: 9    AKEVLGESKGFATHQKESWWWNEEVKAKKECCK 41


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  165 bits (417), Expect(5) = 4e-76
 Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
 Frame = -3

Query: 943  NRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCV 764
            N E YK A+KE  +AV+ A+  A+E LY  L+ K G+K +YR+AK+RERR RDLD V+C+
Sbjct: 846  NWEKYKAAKKETKVAVSEARTRAYEGLYQSLDTKEGEKGIYRIAKSRERRTRDLDQVKCI 905

Query: 763  KDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDI-VLGDLK*FGRY*NFGYCRSIKVEEV 587
            KD+D +VL ++  I  RW+ YF++L NE G K +  LG L       NF Y R I+  EV
Sbjct: 906  KDKDREVLAQEEKINERWKSYFYELFNE-GQKTLPSLGRLCTREEDQNFNYYRRIRDFEV 964

Query: 586  KGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLY 407
            K  +++M  GRA+GPD IP+E  K     G+ WLTKLF  IL++ +MP+E + ST++ +Y
Sbjct: 965  KEALKQMKNGRAVGPDNIPIEVWKGLGGKGINWLTKLFYEILRSKKMPDEWRKSTLVPIY 1024

Query: 406  KDKCDI*SC 380
            + K DI SC
Sbjct: 1025 RIKGDIQSC 1033



 Score = 83.6 bits (205), Expect(5) = 4e-76
 Identities = 38/111 (34%), Positives = 62/111 (55%)
 Frame = -1

Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
            +++EHL+T+ S +  + IDF LLR+VD   C +CK+IP E L TQ+++LV+D  + ++ +
Sbjct: 687  KRDEHLITYKSGMTSSQIDFFLLRRVDRKFCINCKIIPGESLTTQHRVLVLDFRVEQKLR 746

Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIR 1096
            +R      R +W  +     +    R+  E  W  +G A  MW  M   IR
Sbjct: 747  KRHHTKNPRTRWWRMKGEEQRSFLRRVGEEAKWDGNGSAEEMWREMAEVIR 797



 Score = 51.2 bits (121), Expect(5) = 4e-76
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = -3

Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
            +GGD N H+G    GY  +HGG G    N  G ++L+F+  F + IAN+ F K+
Sbjct: 635  LGGDLNGHVGREVTGYGSIHGGHGFGVINAEGKTILDFSSTFDLLIANTCFKKR 688



 Score = 48.5 bits (114), Expect(5) = 4e-76
 Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377  NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
            NYRGIKL+SHTMK                                        ++   +K
Sbjct: 1035 NYRGIKLMSHTMKLWGKG-----------------------------------DRTEVEK 1059

Query: 197  RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTIGD-SEHF 21
            RD             +     LW+ LE + V +AYIRAIKDMY+G  T V T G  +E F
Sbjct: 1060 RD------------TRYQGRFLWKVLEKRRVRIAYIRAIKDMYEGATTSVKTQGGVTEEF 1107

Query: 20   SVVMGL 3
             + +GL
Sbjct: 1108 PIGIGL 1113



 Score = 29.6 bits (65), Expect(5) = 4e-76
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKKNGVRE 981
            A++  G  +G     +  WWWN  + EK++ K+   +E
Sbjct: 800  AKESFGESKGIGPRDKESWWWNASIQEKIKIKRECFKE 837


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  111 bits (277), Expect(5) = 8e-72
 Identities = 65/209 (31%), Positives = 109/209 (52%)
 Frame = -3

Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
            ++KK A+ K  ES    ++      Y +A++ +  AV  A+  +   LY +LE   G K 
Sbjct: 379  REKKAAFKKWQESNSPEDRLE----YTVAKRASKRAVARARSESLSPLYDKLETVEGQKL 434

Query: 826  LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDL 647
            +Y+LA++R++  +D+    CV+D    +L     ++ RW+ YF +LLN +    +     
Sbjct: 435  IYKLARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWRSYFQELLNTQHPCSLHHDPP 494

Query: 646  K*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNV 467
                   N G    I ++E +  +RRM  G+A+GPD+IP+E  KS    G+  LT LFN 
Sbjct: 495  P------NLGLIAPITLDETRNCLRRMKNGKAVGPDDIPIEAWKSLGSLGVLMLTDLFNH 548

Query: 466  ILKTARMPEE*KWSTMILLYKDKCDI*SC 380
            IL T +MP + + S +  +YK +  +  C
Sbjct: 549  ILNTGKMPHQWRLSFITPIYKGRGSVQDC 577



 Score =  101 bits (252), Expect(5) = 8e-72
 Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
           +YRGIKL+SHTMK               + E+Q+GF P   T +AI  +R L+E YR+K+
Sbjct: 579 SYRGIKLMSHTMKLFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLMEAYREKR 638

Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDSEHF 21
           R LH+ F+DL+KA++ VP++ +W  L  KG+  AYI  I+ MY    + V T +GD+  F
Sbjct: 639 RALHVAFLDLQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTRPF 698

Query: 20  SVVMGL 3
            + +G+
Sbjct: 699 PITVGV 704



 Score = 60.5 bits (145), Expect(5) = 8e-72
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = -1

Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
            +  +HL+T+      T ID+LL R+   G   +CKVIP E L  Q++LLVMD  +    K
Sbjct: 238  KNSQHLITYKCGSHSTQIDYLLTRRCHMGRVTNCKVIPGESLTAQHRLLVMDFNV--TPK 295

Query: 1248 RRVMDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
            R+V + R  RIKW  L      +    + +     ++  A   WDR  S I
Sbjct: 296  RKVAEKRRPRIKWWLLNGPMQTDFLAEVKSHNLSTNTETAQEAWDRAQSAI 346



 Score = 49.3 bits (116), Expect(5) = 8e-72
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = -3

Query: 1633 MLFVPSLRSFIFFMFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGM 1454
            +L VPS       + +VGGD N H+G   + Y+ VHGGFG   RN  G ++L    A  +
Sbjct: 175  LLAVPSTE-----LVLVGGDLNGHVGRAAEPYERVHGGFGHGLRNAEGENILRTCIASDL 229

Query: 1453 AIANSKFMK 1427
            A+ N+ F K
Sbjct: 230  AVVNTFFQK 238



 Score = 40.8 bits (94), Expect(5) = 8e-72
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -2

Query: 1091 RKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
            R+VLGV +G R + +  WWWND+V E    KK
Sbjct: 351  RRVLGVSRGGRVIDKETWWWNDEVQEVTREKK 382


>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
            (reverse transcriptase) domain containing protein
            [Haemonchus contortus]
          Length = 816

 Score =  111 bits (278), Expect(5) = 7e-69
 Identities = 63/216 (29%), Positives = 116/216 (53%), Gaps = 6/216 (2%)
 Frame = -3

Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
            ++KK+AY +  +++       +   YK +++ A  AV  AK    + LY +L+ + G+K 
Sbjct: 344  REKKLAYKRWQKTR----ALEDLAAYKTSKRLAKAAVAKAKNIEMDALYEKLDSREGEKF 399

Query: 826  LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
            ++RLAKAR R  +D+  V+ V++ +  +L +   +RRRW+ YF +LLNE+         +
Sbjct: 400  VFRLAKARHRATQDIRVVKAVRNSEGAILRKPGEVRRRWKEYFDRLLNEEFARENSSHSE 459

Query: 664  IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
               G +K +              +EV+  + +M  G+A GPD +P+E  K+    G++WL
Sbjct: 460  ATAGPIKLWTE------------DEVRKAIGKMKVGKATGPDGVPIEAWKALGEHGIKWL 507

Query: 484  TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
            T+  N +    R+P+  + ST++ ++K K D   C+
Sbjct: 508  TRFLNTVTAEGRIPDAWRRSTIVPIFKQKGDAMDCS 543



 Score =  110 bits (275), Expect(5) = 7e-69
 Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
 Frame = -2

Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
           ++  NYRGI+L +HTMK             V I E QFGFMPER TT+AI + R+++E+Y
Sbjct: 540 MDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEGQFGFMPERSTTDAIFIARQIMEKY 599

Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GD 33
           R+K+R  ++ F+DLEKA++++P+EVLW  L  + V    I  +KDMYDG  T + T  G 
Sbjct: 600 REKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGQ 659

Query: 32  SEHFSVVMGL 3
           +    V +G+
Sbjct: 660 TGAIDVTVGV 669



 Score = 56.2 bits (134), Expect(5) = 7e-69
 Identities = 33/112 (29%), Positives = 53/112 (47%)
 Frame = -1

Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
            ++    +T+ S   +T ID +L+R+      KD KV+P E L TQ++ L+ D+ I   KK
Sbjct: 203  KRRSQKVTYSSGGNETEIDHVLVRRSSLKTVKDIKVLPGEELATQHRPLLADIAIELPKK 262

Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCIRG 1093
             R   +R RI+W  L     + + E+++  G     G     W      I G
Sbjct: 263  SRTRTER-RIRWWKLHRLERENLKEKILEVGLPDPEGPIQQTWSNAVKVILG 313



 Score = 47.0 bits (110), Expect(5) = 7e-69
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = -3

Query: 1585 VGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
            + GD N H+GS  +G + VHGG G+  RN  G  +L+ A A  +A+ ++ F K+
Sbjct: 151  IAGDMNGHVGSERRGLERVHGGRGIGVRNEEGERVLDLAMAHDLAVCSTFFAKR 204



 Score = 28.1 bits (61), Expect(5) = 7e-69
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
            A++ LG  +G    ++  W+WND+V   +  KK
Sbjct: 315  AKETLGETRGGLRGNKEAWFWNDEVQRVVREKK 347


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  137 bits (346), Expect(3) = 1e-64
 Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
           NYRGIKL+SHTMK               + +NQF FMP   T EAI+L+R+L+E+YR  K
Sbjct: 259 NYRGIKLMSHTMKLLARVIEHRLRQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRDGK 318

Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GDSEHF 21
            DLHMVFIDLEK Y++VP+++LWR LE KGV VAYI+AIKDMYDG KT V T  G  E F
Sbjct: 319 NDLHMVFIDLEKVYDRVPRDILWRILEKKGVRVAYIQAIKDMYDGAKTAVRTYEGQIESF 378

Query: 20  SVVMGL 3
            + + L
Sbjct: 379 PITVRL 384



 Score =  125 bits (314), Expect(3) = 1e-64
 Identities = 76/199 (38%), Positives = 113/199 (56%)
 Frame = -3

Query: 976 VESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARER 797
           V++K + +K   + LYK    E       AK  A         KK  D  +Y+LAK RE+
Sbjct: 70  VQTKVKAKKECCKALYKDMTDENGERYRRAKQEA---------KKALD--IYKLAKVREK 118

Query: 796 RARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFG 617
           + RDL+ VRC+KDED KVL  +  ++ R + YFH L NE  +    LG+L     Y N+ 
Sbjct: 119 KTRDLNQVRCIKDEDGKVLATENAVKDRLRDYFHNLFNEGHEWSTSLGELSNSEEYRNYF 178

Query: 616 YCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE 437
           + R I+ EEV   +++M   +A+GP++IP++  K     G+ WLT LFN ILK  +M  E
Sbjct: 179 FYRRIRKEEVVVALKKMKHIKAVGPNDIPIKVWKVLGETGITWLTDLFNRILKMKKMSNE 238

Query: 436 *KWSTMILLYKDKCDI*SC 380
            + ST++ +YK+K DI +C
Sbjct: 239 WRNSTLVPIYKNKGDIQNC 257



 Score = 35.0 bits (79), Expect(3) = 1e-64
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 1097 GARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
            G R+V G+    +G+    WWWN++V  K++AKK
Sbjct: 48   GIRRVQGLCSTPKGIF---WWWNEEVQTKVKAKK 78


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  103 bits (256), Expect(4) = 3e-63
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
 Frame = -3

Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875
            GG +     W         + E K   +KW       +R  Y  A++ +  AV  A+   
Sbjct: 626  GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 685

Query: 874  FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695
               LY  LE   G K +Y+LA+AR++  +D+     VKD    +L   A ++ RW+ YF 
Sbjct: 686  LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 745

Query: 694  KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515
            +LLN +    +            N G    I  +E +  +RRM   +A+GPD+IP+E  K
Sbjct: 746  ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 799

Query: 514  SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380
            S    G+  LT LFN +L T  MP + ++S +  +YK +  +  C
Sbjct: 800  SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 844



 Score =  102 bits (254), Expect(4) = 3e-63
 Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377  NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
            +YRG+K++SHTMK               + E Q+GF P   T +AI  IR L+E YR+K+
Sbjct: 846  SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 905

Query: 197  RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMY-DGVKTRVGTIGDSEHF 21
            R LH+ F+DL+KA++ VP++ +W  L  KG+  AYI  I+DMY D V      +GD++ F
Sbjct: 906  RALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPF 965

Query: 20   SVVMGL 3
             + +GL
Sbjct: 966  PISVGL 971



 Score = 57.8 bits (138), Expect(4) = 3e-63
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = -1

Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240
            +HL+T+ S    T ID+LL R+       +CKVIP E L  Q++LLVMD  +  +KK  V
Sbjct: 508  QHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 565

Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
             + R  RI+W  L           + ++    ++  A  +WDR  S I
Sbjct: 566  AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 613



 Score = 50.8 bits (120), Expect(4) = 3e-63
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = -3

Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427
            + IVGGD N H+G   + +D VHGGFG   RN  G ++L    A  +A+ N+ F K
Sbjct: 450  VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 505


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  103 bits (256), Expect(4) = 3e-63
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
 Frame = -3

Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875
            GG +     W         + E K   +KW       +R  Y  A++ +  AV  A+   
Sbjct: 358  GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 417

Query: 874  FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695
               LY  LE   G K +Y+LA+AR++  +D+     VKD    +L   A ++ RW+ YF 
Sbjct: 418  LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 477

Query: 694  KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515
            +LLN +    +            N G    I  +E +  +RRM   +A+GPD+IP+E  K
Sbjct: 478  ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 531

Query: 514  SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380
            S    G+  LT LFN +L T  MP + ++S +  +YK +  +  C
Sbjct: 532  SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 576



 Score =  102 bits (254), Expect(4) = 3e-63
 Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
           +YRG+K++SHTMK               + E Q+GF P   T +AI  IR L+E YR+K+
Sbjct: 578 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 637

Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMY-DGVKTRVGTIGDSEHF 21
           R LH+ F+DL+KA++ VP++ +W  L  KG+  AYI  I+DMY D V      +GD++ F
Sbjct: 638 RALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPF 697

Query: 20  SVVMGL 3
            + +GL
Sbjct: 698 PISVGL 703



 Score = 57.8 bits (138), Expect(4) = 3e-63
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = -1

Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240
            +HL+T+ S    T ID+LL R+       +CKVIP E L  Q++LLVMD  +  +KK  V
Sbjct: 240  QHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 297

Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
             + R  RI+W  L           + ++    ++  A  +WDR  S I
Sbjct: 298  AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 345



 Score = 50.8 bits (120), Expect(4) = 3e-63
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = -3

Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427
            + IVGGD N H+G   + +D VHGGFG   RN  G ++L    A  +A+ N+ F K
Sbjct: 182  VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 237


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score =  132 bits (331), Expect(3) = 4e-62
 Identities = 66/126 (52%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
           NYRGIKL+SHTMK               + +NQFGFM  R T EAI+L++R++E+YR  K
Sbjct: 218 NYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDK 277

Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDSEHF 21
           +DLH+VF DLEK Y++VP+E+LW+ LE K V +AYIRAIKDMY+   T V T  G +E F
Sbjct: 278 KDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDF 337

Query: 20  SVVMGL 3
            + +GL
Sbjct: 338 PITIGL 343



 Score =  125 bits (313), Expect(3) = 4e-62
 Identities = 74/193 (38%), Positives = 106/193 (54%)
 Frame = -3

Query: 958 MEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLD 779
           +E W   + YKIARKEA   V+ A+  AFE LY  L  K G+K +Y+L+K RER+ RDLD
Sbjct: 57  VETW---DKYKIARKEAKKVVSEARTQAFEGLYQSLGTKEGEKSIYKLSKGRERKTRDLD 113

Query: 778 HVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIK 599
            V+C+KDE+ +VL+                 + +G                N+ Y R I+
Sbjct: 114 QVKCIKDEEGRVLVR----------------HRRGGP--------------NYNYYRRIQ 143

Query: 598 VEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTM 419
             EV+  ++RM    A+GPD IP+E  KS    G  WL  LFN I++T +M +E + ST+
Sbjct: 144 EHEVREALKRMGSDEAVGPDNIPIEVWKSLGDRGTVWLANLFNEIIRTKKMSDEWRRSTL 203

Query: 418 ILLYKDKCDI*SC 380
           I + K+K DI +C
Sbjct: 204 IPIDKNKGDIQNC 216



 Score = 32.7 bits (73), Expect(3) = 4e-62
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKKNGVREIGR 972
            A++ LG  +G     +  WWWND V  K+  K++  ++  R
Sbjct: 13   AKETLGESRGFGPRGKESWWWNDNVQSKVRIKRDCFKDWSR 53


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score =  107 bits (268), Expect(4) = 2e-60
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 6/226 (2%)
 Frame = -3

Query: 1057 VSIEGTGGGMIKFMRRWKQKKMAYAKLVESKDEMEKWTN------RELYKIARKEANLAV 896
            +++  T GG I     W   +     + + KD  + W +      +E YK  +KE    V
Sbjct: 354  ITLGRTKGGRINNKETWWWTEAVQNAIQKKKDAFKTWQSTQTSEDQERYKRIKKETKKIV 413

Query: 895  TAAKMAAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRR 716
               +  A + +Y +LE K G K +++LAK R    RD    R VKD + ++L  D+ +  
Sbjct: 414  AVERAVALKTMYEQLETKEGQKCIFKLAKQRCWSTRDPTRCRAVKDPNGELLYGDSDVLS 473

Query: 715  RWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDE 536
             W  Y+ +LLN       +   ++      N G    I+  E K  + +M   +A GPD 
Sbjct: 474  AWHQYYEQLLNPTQAAIQLTKVVR------NIGLIPPIRPNEFKMALEKMPNKKATGPDG 527

Query: 535  IPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDK 398
            IPVE  K     G+E LTKLFN +L++++MP   + ST++ +YK K
Sbjct: 528  IPVEAWKCLREHGIETLTKLFNCVLRSSKMPAAWRLSTIVPIYKGK 573



 Score = 92.4 bits (228), Expect(4) = 2e-60
 Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
 Frame = -2

Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207
           E  NYRGIKLLSHTMK               + +N +GF+    TT+ +  +  + E+YR
Sbjct: 578 ECSNYRGIKLLSHTMKLYERVIDSRLRSECSLSKNHYGFVQGLSTTDPMFALNTIAEEYR 637

Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT-IGDS 30
           +K R L++ F+D+EKA+++VP++ +W  L  K V   Y+  I DMY   ++ V T +G +
Sbjct: 638 EKLRPLYVAFLDMEKAFDRVPRDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQT 697

Query: 29  EHFSVVMGL 3
           +  +V  GL
Sbjct: 698 KPIAVAEGL 706



 Score = 54.7 bits (130), Expect(4) = 2e-60
 Identities = 31/110 (28%), Positives = 54/110 (49%)
 Frame = -1

Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
            +K EH +T+ S    + ID++L+ +   G   +CKVIP E  +TQ++++VMD+  +K  K
Sbjct: 240  KKPEHTITYKSGQTTSQIDYILVNRAYIGRVTNCKVIPGECAVTQHRIVVMDMLFKKTSK 299

Query: 1248 RRVMDDRLRIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
             +        KW +L      E    L +     +  D   +WD ++  I
Sbjct: 300  TKTSHTPEITKWWNLKGDKIPEFCNHL-SNLKVDTELDIDNIWDHLSKSI 348



 Score = 50.1 bits (118), Expect(4) = 2e-60
 Identities = 25/55 (45%), Positives = 32/55 (58%)
 Frame = -3

Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
            ++GGD N HIG+  K +  VHGG G    N  G  +L  A AF +AI N+ F KK
Sbjct: 187  LLGGDLNGHIGTENKAFKRVHGGHGFGTINEEGEVILSTAAAFDLAITNTFFAKK 241


>gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1470

 Score =  103 bits (256), Expect(4) = 6e-58
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
 Frame = -3

Query: 1036 GGMIKFMRRWKQKKMAYAKLVESKDEMEKWT------NRELYKIARKEANLAVTAAKMAA 875
            GG +     W         + E K   +KW       +R  Y  A++ +  AV  A+   
Sbjct: 1144 GGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDR 1203

Query: 874  FERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFH 695
               LY  LE   G K +Y+LA+AR++  +D+     VKD    +L   A ++ RW+ YF 
Sbjct: 1204 LSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFK 1263

Query: 694  KLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*K 515
            +LLN +    +            N G    I  +E +  +RRM   +A+GPD+IP+E  K
Sbjct: 1264 ELLNTQHPCSLPTEIPP------NLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWK 1317

Query: 514  SADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380
            S    G+  LT LFN +L T  MP + ++S +  +YK +  +  C
Sbjct: 1318 SLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDC 1362



 Score = 82.4 bits (202), Expect(4) = 6e-58
 Identities = 38/91 (41%), Positives = 57/91 (62%)
 Frame = -2

Query: 377  NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
            +YRG+K++SHTMK               + E Q+GF P   T +AI  IR L+E YR+K+
Sbjct: 1364 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 1423

Query: 197  RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGV 105
            R LH+ F+DL+KA++ VP++ +W  L  KG+
Sbjct: 1424 RALHVAFLDLQKAFDCVPRQCIWWALRFKGI 1454



 Score = 60.1 bits (144), Expect(4) = 6e-58
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = -1

Query: 1419 EHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKKRRV 1240
            +HL+T+ S    T ID+LL R+   G   +CKVIP E L  Q++LLVMD  +  +KK  V
Sbjct: 1026 QHLITYKSGSHSTQIDYLLTRRCHIGKVTNCKVIPGESLTAQHRLLVMDYVVTPKKK--V 1083

Query: 1239 MDDRL-RIKWGSLTMASAKEMGERLMAEGAWGSSGDAIGMWDRMTSCI 1099
             + R  RI+W  L           + ++    ++  A  +WDR  S I
Sbjct: 1084 AEKRKPRIRWWLLNGTMQTSFRAEVESQNLSTNTETAQEVWDRAQSAI 1131



 Score = 50.8 bits (120), Expect(4) = 6e-58
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = -3

Query: 1594 MFIVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMK 1427
            + IVGGD N H+G   + +D VHGGFG   RN  G ++L    A  +A+ N+ F K
Sbjct: 968  VIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQK 1023


>emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
            (reverse transcriptase) domain containing protein
            [Haemonchus contortus]
          Length = 854

 Score = 97.1 bits (240), Expect(4) = 4e-54
 Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
 Frame = -3

Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
            ++KK  +A L+E  D+     N + Y+IA+KEA  AV + K A F  L  +LE + G++ 
Sbjct: 352  EKKKQYHAFLIEKTDD-----NWQRYQIAKKEAKKAVASEKAAHFAELNKKLESREGERY 406

Query: 826  LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLN-EKGDKDIVLGD 650
            +YRLAK R R+  D++    + DE+ ++L +   +  RW+ YF  +   E     I    
Sbjct: 407  IYRLAKTRNRQTEDIEKFFGINDENGRLLTDRRQVLERWREYFANISTVEFAHPAIPCAP 466

Query: 649  LK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFN 470
                      G  + I V E    +++M  G+A GPD++  +  KS       WLT+ FN
Sbjct: 467  PV-------HGPVQKITVSETITALKKMKSGKATGPDDVAADLWKSKGWNPAGWLTEFFN 519

Query: 469  VILKTARMPEE*KWSTMILLYKDKCDI*SC 380
              +   ++PE  + ST I ++K K  +  C
Sbjct: 520  QAVAEKKVPESWQQSTTIPIWKKKGSLGDC 549



 Score = 78.2 bits (191), Expect(4) = 4e-54
 Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = -2

Query: 374 YRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKKR 195
           YR I+LLSH+MK             V +  NQ  F+    T +AIH    L+E++ +K+R
Sbjct: 552 YRPIRLLSHSMKFFERIVDSRIRDIVELITNQCVFVAGCSTIDAIHATSLLLEKHHEKRR 611

Query: 194 DLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVG-TIGDSEHFS 18
            +H+ F+DLEKA+ +VP++V+W  L   GV   +I  ++ +Y   K+RV    G    F 
Sbjct: 612 PIHLAFLDLEKAFGRVPRDVIWYALRQHGVPEEHIEWVRILYTSPKSRVQMAAGTLTEFP 671

Query: 17  VVMGL 3
           + +G+
Sbjct: 672 ISVGV 676



 Score = 55.8 bits (133), Expect(4) = 4e-54
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
 Frame = -1

Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEK- 1252
            +++ HL+TF S   +T IDF+L+R  D GL  D K +P E + TQ++ L+  L+I   K 
Sbjct: 212  KRDSHLITFYSGENRTQIDFVLVRHRDQGLVTDAKTVPYETVATQHRPLICTLKIAPPKP 271

Query: 1251 KRRVMDDRLRIKWGSL-----TMASAKEMGERLMAEGAWGSSGDAI 1129
            K        RIKW  L     T+ S+  +      +  W  + +AI
Sbjct: 272  KLAERSGPARIKWWRLKEKEETVVSSILLPAVTTVDETWKGAAEAI 317



 Score = 52.4 bits (124), Expect(4) = 4e-54
 Identities = 24/55 (43%), Positives = 34/55 (61%)
 Frame = -3

Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
            +V GD N H+G+   GY   HGGFG   RN  G  +LE+A +  +AI N++F K+
Sbjct: 160  VVAGDLNGHVGATKDGYS-CHGGFGYGSRNTDGERILEYADSHNLAIVNTRFRKR 213


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria chalumnae]
          Length = 1500

 Score =  125 bits (315), Expect(2) = 2e-53
 Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 6/219 (2%)
 Frame = -3

Query: 1018 MRRWKQKKMAYAKLVESKDEMEKWTNR------ELYKIARKEANLAVTAAKMAAFERLYV 857
            MR W +      K  + K + ++W         + Y I +++    V  AK+ A+  LY 
Sbjct: 224  MRWWNEDVQEVTK--DKKIKFKRWQKTRQKEDLDEYVIVKRQTKRVVAKAKVMAYVELYQ 281

Query: 856  ELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK 677
            +L+ + G+K +YR+A+ARER+ RD D V+ +KD + +V++++  ++ RW+ YF KLLNE+
Sbjct: 282  KLDSREGEKMVYRIARARERKKRDFDQVKVIKDSEGQVILDENKVKERWREYFEKLLNEE 341

Query: 676  GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAG 497
              ++ +   L       N      I  EEV   +++M   +A GPDE+P+E  K     G
Sbjct: 342  NPREELPEGLP-----ENHTAVEGITKEEVIQAMKKMKNRKATGPDEVPIETFKEMKEMG 396

Query: 496  LEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SC 380
            L  LT+L+  I +  +MP E + ST++ ++K K D+  C
Sbjct: 397  LVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRKGDVQDC 435



 Score =  114 bits (284), Expect(2) = 2e-53
 Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
 Frame = -2

Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207
           + +NYRGI L+SH MK             V I ENQFGF   R T +AI  ++ L+E+Y+
Sbjct: 434 DCNNYRGIALMSHAMKLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYK 493

Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRV-GTIGDS 30
           +K++DLHMVF+DLEKAY++VP+ ++W C+  +G+   YIR +KDMY G K  V    G +
Sbjct: 494 EKRKDLHMVFVDLEKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTT 553

Query: 29  EHFSVVMGL 3
             F V +G+
Sbjct: 554 TSFPVKVGV 562



 Score = 47.4 bits (111), Expect(2) = 1e-09
 Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -1

Query: 1428 RKEEHLMTFCSSVAKTHIDFLLLRKVDNGLCKDCKVIPSEYLITQYKLLVMDLEIRKEKK 1249
            ++E +L+T+ S   ++ ID++L+++      K+CKVI  E L  Q++LLVMD +    KK
Sbjct: 118  KQERYLVTYRSGNTQSQIDYILVKRQLLKRVKNCKVILGECLTGQHRLLVMDYKTECAKK 177

Query: 1248 RRV-MDDRLRIKWGSL 1204
             +  ++   +IKW  L
Sbjct: 178  NKAKLEMERKIKWWCL 193



 Score = 45.1 bits (105), Expect(2) = 1e-09
 Identities = 22/55 (40%), Positives = 32/55 (58%)
 Frame = -3

Query: 1588 IVGGDFNRHIGSHPKGYDDVHGGFGLVDRNGGGVSLLEFAKAFGMAIANSKFMKK 1424
            IVG D N  +G    GY+  HGG G  +RN  G ++L  A+A  +A+ N+ F K+
Sbjct: 65   IVGVDLNGRVGRDRCGYEGNHGGQGYGERNTEGENVLRMAQAHNLAVVNTYFKKQ 119


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  142 bits (357), Expect(2) = 2e-53
 Identities = 73/126 (57%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 NYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYRQKK 198
           NYRGIKL++HTMK               + ENQFGFM  R  TEAI+L+RR++E+YR  K
Sbjct: 130 NYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNK 189

Query: 197 RDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTIGD-SEHF 21
           RDLHMVFIDLEKAY++VP+EVLW+ LE   V +AYIRAIKDMYDG  T V T G  +E F
Sbjct: 190 RDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEF 249

Query: 20  SVVMGL 3
            + +GL
Sbjct: 250 PIGIGL 255



 Score = 97.8 bits (242), Expect(2) = 2e-53
 Identities = 54/127 (42%), Positives = 76/127 (59%)
 Frame = -3

Query: 760 DEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKG 581
           D+D +VL ++  I  RW+ YF++L NE       LG L    +  NF Y R I+  EVK 
Sbjct: 2   DKDGEVLAQEEKINERWKSYFYELFNEGQKTLSSLGRLCTREKDKNFDYYRRIRDFEVKE 61

Query: 580 DVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKD 401
            + +M   RA+GPD IP+E  K      + WLTKLFN IL++ +MP E + ST++ +YK+
Sbjct: 62  ALNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKN 121

Query: 400 KCDI*SC 380
           K DI SC
Sbjct: 122 KGDIQSC 128


>emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]
          Length = 499

 Score =  106 bits (264), Expect(3) = 4e-46
 Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
 Frame = -3

Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
            ++KK+AY +  +++       +   YK +++ A  AV  AK    + LY +L+ + G+K 
Sbjct: 129  REKKLAYERWQKTR----ALEDLAAYKTSKRLAKAAVAKAKNMEMDALYEKLDSREGEKF 184

Query: 826  LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
            ++RLAKAR R  +D+  V+ V++ +  +L +   +RRRW+ YF K LNE+         +
Sbjct: 185  VFRLAKARHRATQDIGVVKSVRNSEGAILRKPGEVRRRWKEYFDKFLNEEFARENSSHLE 244

Query: 664  IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
               G +K             +  +EV+  + +M  G+A GP  +P+E  K+    G++WL
Sbjct: 245  ETAGPIK-------LKMKCDVTEDEVRIAIGKMKVGKATGPGGVPIEAWKALGEHGIKWL 297

Query: 484  TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
            TK  N +    R+P+  + ST++ ++K K D   C+
Sbjct: 298  TKFLNTVTAEGRIPDAWRRSTIVPIFKRKGDPMDCS 333



 Score =  102 bits (254), Expect(3) = 4e-46
 Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = -2

Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
           ++  NYRGI+L +HTMK             V I E  FGFMPER TT+AI + R+++ +Y
Sbjct: 330 MDCSNYRGIRLTAHTMKLYERMVDSRLRGLVPISEKLFGFMPERSTTDAIFIARQIMGKY 389

Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGTI-GD 33
           R+ +R  ++ F+DLEKA++++P+EVLW  L  + V    I  +KDMYDG  T + T  G 
Sbjct: 390 REMRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGH 449

Query: 32  SEHFSVVMGL 3
           +    V +G+
Sbjct: 450 TGAIDVTVGV 459



 Score = 27.3 bits (59), Expect(3) = 4e-46
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
            A++ LG  +G     +  W+WND+V   +  KK
Sbjct: 100  AKETLGETRGGLRGDKEAWFWNDEVQRVVREKK 132


>emb|CDJ90886.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
            (reverse transcriptase) domain containing protein
            [Haemonchus contortus]
          Length = 520

 Score =  108 bits (270), Expect(3) = 7e-41
 Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
 Frame = -3

Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
            ++KK+AY +  +++       N   YK +++ A  AV  A     + LY +L+ + G+K 
Sbjct: 202  REKKLAYKRWQKTR----ALENLAAYKTSKRLAKAAVAKANKMEMDALYGKLDSREGEKF 257

Query: 826  LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
            ++RLAKAR R  +D+  V+ V++ +  +L +   +RRRW+ YF +LLNE+         +
Sbjct: 258  VFRLAKARNRATQDIGVVKSVRNSEGAILRKPGEVRRRWKEYFDRLLNEEFARGNSSHLE 317

Query: 664  IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
               G +K +              +EV+  + +M  G+A GPD +P+E  K+    G++WL
Sbjct: 318  ATAGPIKLWTE------------DEVRIAIGKMKVGKATGPDGVPIEAWKALGEHGIKWL 365

Query: 484  TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
            T+  N +    R+P+  + ST+  ++K K D   C+
Sbjct: 366  TRFLNTVTAKGRIPDAWRRSTIAPIFKQKGDAMDCS 401



 Score = 83.2 bits (204), Expect(3) = 7e-41
 Identities = 38/84 (45%), Positives = 59/84 (70%)
 Frame = -2

Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
           ++  NYRGI+L +HTMK             V I E QFGFMPER TT+AI + R+++E+Y
Sbjct: 398 MDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEEQFGFMPERSTTDAIFIARQIMEKY 457

Query: 209 RQKKRDLHMVFIDLEKAYNKVPKE 138
           R+K+R  ++ F+DLEKA++++P++
Sbjct: 458 REKRRPCYLAFLDLEKAFDRLPRK 481



 Score = 26.6 bits (57), Expect(3) = 7e-41
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 1094 ARKVLGVLQGSRGVHRGDWWWNDKVHEKMEAKK 996
            A++ LG  QGS    +  W+ ND+V + +  KK
Sbjct: 173  AKETLGETQGSSRGDKEAWFGNDEVQQVVREKK 205


>ref|XP_005753988.1| PREDICTED: RNA-directed DNA polymerase from mobile element
            jockey-like [Pundamilia nyererei]
          Length = 569

 Score =  100 bits (249), Expect(2) = 1e-40
 Identities = 65/210 (30%), Positives = 104/210 (49%)
 Frame = -3

Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
            K+KK A    ++S+ + +     + Y+  R  A  AV AAK + +++LY EL+  GG  K
Sbjct: 60   KEKKSALKVWLKSRSDGDY----QQYRALRSAAKKAVAAAKASHYDQLYEELDTPGGANK 115

Query: 826  LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEKGDKDIVLGDL 647
            +YRLA +R R  +D+  V+ +KD + + L +   I  RW  YF  + N +     +    
Sbjct: 116  IYRLASSRHRATQDIGQVKHIKDANHQTLRDPPAILNRWSEYFSDICNVEFPHQPI---- 171

Query: 646  K*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWLTKLFNV 467
                     G    I ++EV+  V+ M  G+A GPD+IP E  K   R G   L  LFN 
Sbjct: 172  --HSAPPVPGPVPPITIKEVEAAVKNMKNGKATGPDDIPAEVWKLLGRQGALVLASLFNS 229

Query: 466  ILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
            I++   +P     S  + ++K K D+  C+
Sbjct: 230  IIRDGTVPAAWSTSITVPIWKGKGDVAECS 259



 Score = 96.3 bits (238), Expect(2) = 1e-40
 Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
 Frame = -2

Query: 386 ELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQYR 207
           E  NYR I+LLSHTMK             V +  NQ GF+  R TT+AIH  R L+E++R
Sbjct: 257 ECSNYRPIRLLSHTMKVFERIIDARMREIVNLTPNQCGFIRGRGTTDAIHAARLLLEKHR 316

Query: 206 QKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRV-GTIGDS 30
           +K + +HM F+DLEKA+++VP +++W  L+  GV  AY++  K +Y  V + V   +G S
Sbjct: 317 EKSKTIHMAFLDLEKAFDRVPHDLIWHSLQSHGVPEAYVKWTKLLYRQVTSVVRSPVGTS 376

Query: 29  EHFSVVMGL 3
             F++ +G+
Sbjct: 377 PPFNINVGI 385


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 1526

 Score =  103 bits (258), Expect(2) = 5e-40
 Identities = 51/116 (43%), Positives = 75/116 (64%)
 Frame = -2

Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
           ++  NYRGI+L +HTMK             V I E QFGFMP R TT+AI + R+++ +Y
Sbjct: 603 MDCSNYRGIRLAAHTMKLYERLVDSRLRELVPISEKQFGFMPGRSTTDAIFITRQVMGKY 662

Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT 42
           R+K+R  ++ F+DLEKA++++P++VLWR L  + V    I  +KDMYDG  T + T
Sbjct: 663 REKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRT 718



 Score = 90.9 bits (224), Expect(2) = 5e-40
 Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
 Frame = -3

Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
            +QKK AY +   ++   +       Y+ +++ A  AV  AK    + LY  L+ + G+K 
Sbjct: 407  RQKKSAYKRWQRTRAPEDL----SAYRTSKRLAKAAVAKAKNTEMDALYEILDSREGEKF 462

Query: 826  LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
            ++RLAKAR    +D+  V+ VK+ +  +L         W+ YF  LLNE+         +
Sbjct: 463  VFRLAKARHLATQDIGVVKSVKNSEGAILTXXXXXXXXWEEYFDGLLNEEFARQNSSQLE 522

Query: 664  IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
               G +  +               EV+  + +M  G+A GPD +P++  K+    G++WL
Sbjct: 523  ATAGPINLWTE------------NEVRRAMGKMKVGKATGPDGVPIKAWKALGEHGVKWL 570

Query: 484  TKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
            T+  N +    R+P+  + ST++ ++K K D   C+
Sbjct: 571  TRFLNTVTAKGRIPDAWRRSTIVPIFKQKGDAMDCS 606



 Score = 80.9 bits (198), Expect(2) = 1e-14
 Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
 Frame = -3

Query: 1006 KQKKMAYAKLVESKDEMEKWTNRELYKIARKEANLAVTAAKMAAFERLYVELEKKGGDKK 827
            +QKK AY +  +++   +       Y+ +++ A  AV  AK    + LY +L+ + G+K 
Sbjct: 139  RQKKSAYKRWQKTRAPEDL----AAYRTSKRLAKAAVAKAKNTEMDALYEKLDSREGEKF 194

Query: 826  LYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHKLLNEK------GDKD 665
            ++RLAKAR R  RD+  V+ V++ +  +L +   +RRRW+ YF  LLNE+         +
Sbjct: 195  VFRLAKARHRATRDIGVVKSVRNSEGAILRKPGEVRRRWEEYFDGLLNEEFARQNSSQLE 254

Query: 664  IVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIPVEF*KSADRAGLEWL 485
               G +  +               EV+  + +M  G+A GPD +P+E  K+    G++ +
Sbjct: 255  ATAGPINLWTE------------NEVRRAMGKMKVGKATGPDGVPIEAWKALGEYGVKCM 302

Query: 484  TKLFN 470
             + ++
Sbjct: 303  EEKYH 307



 Score = 28.5 bits (62), Expect(2) = 1e-14
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -2

Query: 1094 ARKVLGVLQGSRGVHRGD---WWWNDKVHEKMEAKKNGVR 984
            A++ LG    +RG  RGD   W+WND+V   +  KK+  +
Sbjct: 110  AKETLGE---TRGGFRGDKEAWFWNDEVQRVVRQKKSAYK 146


>emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 432

 Score =  101 bits (251), Expect(2) = 5e-39
 Identities = 50/116 (43%), Positives = 74/116 (63%)
 Frame = -2

Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
           ++  N RGI+L +HT+K             V I E+Q GFMPER TT+AI + R+++E+Y
Sbjct: 157 MDCSNCRGIRLAAHTIKLYERLVDSRLRDLVPISEDQIGFMPERSTTDAIFIARQIMEKY 216

Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCLEVKGVLVAYIRAIKDMYDGVKTRVGT 42
           R K+R  ++ F+DLEKA++++P+EVLW  L  + V    I  +KDMYDG  T + T
Sbjct: 217 RGKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRT 272



 Score = 90.5 bits (223), Expect(2) = 5e-39
 Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
 Frame = -3

Query: 871 ERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFYFHK 692
           + LY +L+ + G+K ++RLAKAR R  +D+  V+ V++ +  +L +   +RRRW+ YF +
Sbjct: 2   DALYEKLDSREGEKFVFRLAKARHRATQDIGVVKSVRNSEGAILRKPGKVRRRWKEYFDR 61

Query: 691 LLNEK------GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPDEIP 530
           LLNE+         +   G +K +              +EV+  + +M  G+A GPD +P
Sbjct: 62  LLNEEFARENSSHLEATAGPIKLWTE------------DEVRIAIGKMKVGKATGPDGVP 109

Query: 529 VEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
           +E  ++    G++WLT+  N +    R+P+  + S +  ++K K D   C+
Sbjct: 110 IEAWEALGEHGIKWLTRFLNTVSAEGRIPDAWRRSAIDPIFKQKGDAMDCS 160


>emb|CDJ93360.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 506

 Score = 96.3 bits (238), Expect(2) = 2e-37
 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 12/234 (5%)
 Frame = -3

Query: 1042 TGGGMIKFMRRWKQKKMAYAKLVESKDEMEKWTNREL------YKIARKEANLAVTAAKM 881
            T GG       W         + + K   ++W           Y+ +++ A  AV  AK 
Sbjct: 193  TRGGFRGDKEAWFWNDEVQRVVRQKKSACKRWQRTRAPEDLSAYRTSKRLAKAAVAKAKN 252

Query: 880  AAFERLYVELEKKGGDKKLYRLAKARERRARDLDHVRCVKDEDDKVLMEDAHIRRRWQFY 701
               + LY +L+ + G K ++RLAKAR R  +D+  V+ V++ +  +L +   +RRRW+ Y
Sbjct: 253  TEMDALYEKLDTREGGKFVFRLAKARHRATQDIGVVKSVRNSEGAILRKPGDVRRRWKEY 312

Query: 700  FHKLLNEK------GDKDIVLGDLK*FGRY*NFGYCRSIKVEEVKGDVRRMCRGRAIGPD 539
            F  L NE+         +   G +  +               EV+  + +M  G+A G D
Sbjct: 313  FDGLFNEEFARQNSSQLEATAGPINLWTE------------NEVRRAMGKMKVGKATGSD 360

Query: 538  EIPVEF*KSADRAGLEWLTKLFNVILKTARMPEE*KWSTMILLYKDKCDI*SCT 377
             +P+E  K+    G++WLT+  N +    R+P+  + ST++ ++K K D   C+
Sbjct: 361  GVPIEAWKALGEHGVKWLTRFLNTVTAERRIPDAWRRSTIVPIFKQKGDAMECS 414



 Score = 90.1 bits (222), Expect(2) = 2e-37
 Identities = 42/90 (46%), Positives = 62/90 (68%)
 Frame = -2

Query: 389 LELHNYRGIKLLSHTMKXXXXXXXXXXXXXVYIFENQFGFMPERLTTEAIHLIRRLVEQY 210
           +E  NYRGI+L +HTMK             V I   QFGFMPER TT+AI + R+++E+Y
Sbjct: 411 MECSNYRGIRLTAHTMKLYERLVDSRLRELVPISHEQFGFMPERSTTDAIFIARQVMEKY 470

Query: 209 RQKKRDLHMVFIDLEKAYNKVPKEVLWRCL 120
           R+K+   ++ F+DLEKA++++P++VLWR L
Sbjct: 471 REKRGPCYIAFLDLEKAFDRLPRQVLWRAL 500


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