BLASTX nr result
ID: Atropa21_contig00011210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00011210
(1276 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339894.1| PREDICTED: heterogeneous nuclear ribonucleop... 98 8e-18
ref|XP_004232027.1| PREDICTED: RNA-binding protein Musashi homol... 98 8e-18
ref|XP_006380703.1| hypothetical protein POPTR_0007s10970g [Popu... 91 1e-15
ref|XP_006380701.1| hypothetical protein POPTR_0007s10970g [Popu... 91 1e-15
ref|XP_002310138.1| hypothetical protein POPTR_0007s10970g [Popu... 91 1e-15
ref|XP_002306901.2| hypothetical protein POPTR_0005s18180g [Popu... 90 2e-15
ref|XP_002307266.1| RNA recognition motif-containing family prot... 90 2e-15
gb|ESW28793.1| hypothetical protein PHAVU_002G018500g [Phaseolus... 90 2e-15
ref|XP_003517301.1| PREDICTED: heterogeneous nuclear ribonucleop... 90 2e-15
gb|ACU20926.1| unknown [Glycine max] gi|255642525|gb|ACU21526.1|... 90 2e-15
ref|XP_002523592.1| RNA-binding protein, putative [Ricinus commu... 89 3e-15
gb|AFK44011.1| unknown [Lotus japonicus] 88 7e-15
gb|AFK43965.1| unknown [Lotus japonicus] 88 7e-15
gb|EOX91426.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 88 9e-15
gb|EOX91425.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 88 9e-15
gb|EOX91424.1| RNA-binding family protein isoform 2 [Theobroma c... 88 9e-15
gb|EOX91423.1| RNA-binding family protein isoform 1 [Theobroma c... 88 9e-15
ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homol... 88 9e-15
ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding prote... 88 9e-15
emb|CAN61300.1| hypothetical protein VITISV_011315 [Vitis vinifera] 88 9e-15
>ref|XP_006339894.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
tuberosum]
Length = 371
Score = 97.8 bits (242), Expect = 8e-18
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
VLDVYVPKDP+RPGHRGFGFVTFADDGVADRVSRRPHEICGHQV +
Sbjct: 258 VLDVYVPKDPRRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVAI 303
>ref|XP_004232027.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Solanum
lycopersicum]
Length = 376
Score = 97.8 bits (242), Expect = 8e-18
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
VLDVYVPKDP+RPGHRGFGFVTFADDGVADRVSRRPHEICGHQV +
Sbjct: 263 VLDVYVPKDPRRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVAI 308
>ref|XP_006380703.1| hypothetical protein POPTR_0007s10970g [Populus trichocarpa]
gi|550334619|gb|ERP58500.1| hypothetical protein
POPTR_0007s10970g [Populus trichocarpa]
Length = 297
Score = 90.9 bits (224), Expect = 1e-15
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICGHQV +
Sbjct: 179 ILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAI 224
>ref|XP_006380701.1| hypothetical protein POPTR_0007s10970g [Populus trichocarpa]
gi|550334617|gb|ERP58498.1| hypothetical protein
POPTR_0007s10970g [Populus trichocarpa]
Length = 367
Score = 90.9 bits (224), Expect = 1e-15
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICGHQV +
Sbjct: 249 ILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAI 294
>ref|XP_002310138.1| hypothetical protein POPTR_0007s10970g [Populus trichocarpa]
gi|566180686|ref|XP_006380702.1| hypothetical protein
POPTR_0007s10970g [Populus trichocarpa]
gi|222853041|gb|EEE90588.1| hypothetical protein
POPTR_0007s10970g [Populus trichocarpa]
gi|550334618|gb|ERP58499.1| hypothetical protein
POPTR_0007s10970g [Populus trichocarpa]
Length = 367
Score = 90.9 bits (224), Expect = 1e-15
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICGHQV +
Sbjct: 249 ILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAI 294
>ref|XP_002306901.2| hypothetical protein POPTR_0005s18180g [Populus trichocarpa]
gi|550339219|gb|EEE93897.2| hypothetical protein
POPTR_0005s18180g [Populus trichocarpa]
Length = 345
Score = 90.1 bits (222), Expect = 2e-15
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
++DVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICGHQV +
Sbjct: 227 IIDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAI 272
>ref|XP_002307266.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222856715|gb|EEE94262.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 367
Score = 90.1 bits (222), Expect = 2e-15
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
++DVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICGHQV +
Sbjct: 249 IIDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAI 294
>gb|ESW28793.1| hypothetical protein PHAVU_002G018500g [Phaseolus vulgaris]
Length = 357
Score = 89.7 bits (221), Expect = 2e-15
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVP+DPKR GHRGFGFVTFA+DGVADRVSRR HEICGHQV +
Sbjct: 253 ILDVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAI 298
>ref|XP_003517301.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Glycine
max]
Length = 362
Score = 89.7 bits (221), Expect = 2e-15
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVP+DPKR GHRGFGFVTFA+DGVADRVSRR HEICGHQV +
Sbjct: 255 ILDVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAI 300
>gb|ACU20926.1| unknown [Glycine max] gi|255642525|gb|ACU21526.1| unknown [Glycine
max]
Length = 213
Score = 89.7 bits (221), Expect = 2e-15
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVP+DPKR GHRGFGFVTFA+DGVADRVSRR HEICGHQV +
Sbjct: 106 ILDVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAI 151
>ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
gi|223537154|gb|EEF38787.1| RNA-binding protein, putative
[Ricinus communis]
Length = 359
Score = 89.4 bits (220), Expect = 3e-15
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA++GVADRVSRR HEICGHQV +
Sbjct: 250 ILDVYVPKDPKRTGHRGFGFVTFAEEGVADRVSRRSHEICGHQVAI 295
>gb|AFK44011.1| unknown [Lotus japonicus]
Length = 220
Score = 88.2 bits (217), Expect = 7e-15
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVY+P+D KR GHRGFGFVTFA+DGVADRV+RRPHEICGHQV +
Sbjct: 110 ILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGHQVAI 155
>gb|AFK43965.1| unknown [Lotus japonicus]
Length = 191
Score = 88.2 bits (217), Expect = 7e-15
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVY+P+D KR GHRGFGFVTFA+DGVADRV+RRPHEICGHQV +
Sbjct: 81 ILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGHQVAI 126
>gb|EOX91426.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 4 [Theobroma
cacao]
Length = 356
Score = 87.8 bits (216), Expect = 9e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICG QV +
Sbjct: 249 ILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 294
>gb|EOX91425.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 3 [Theobroma
cacao]
Length = 357
Score = 87.8 bits (216), Expect = 9e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICG QV +
Sbjct: 249 ILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 294
>gb|EOX91424.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 356
Score = 87.8 bits (216), Expect = 9e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICG QV +
Sbjct: 249 ILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 294
>gb|EOX91423.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 390
Score = 87.8 bits (216), Expect = 9e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICG QV +
Sbjct: 283 ILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 328
>ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus] gi|449502733|ref|XP_004161727.1| PREDICTED:
RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
Length = 377
Score = 87.8 bits (216), Expect = 9e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICG QV +
Sbjct: 260 ILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 305
>ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform 1
[Vitis vinifera] gi|359480890|ref|XP_003632540.1|
PREDICTED: uncharacterized RNA-binding protein
C660.15-like isoform 2 [Vitis vinifera]
gi|296082418|emb|CBI21423.3| unnamed protein product
[Vitis vinifera]
Length = 359
Score = 87.8 bits (216), Expect = 9e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICG QV +
Sbjct: 250 ILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 295
>emb|CAN61300.1| hypothetical protein VITISV_011315 [Vitis vinifera]
Length = 335
Score = 87.8 bits (216), Expect = 9e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 1276 VLDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVFV 1139
+LDVYVPKDPKR GHRGFGFVTFA+DGVADRVSRR HEICG QV +
Sbjct: 243 ILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAI 288