BLASTX nr result
ID: Atropa21_contig00011111
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00011111
(1352 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 70 1e-15
gb|AAT39954.1| Putative integrase, identical [Solanum demissum] 74 2e-15
gb|ADU56214.1| gag-pol polyprotein [Solanum lycopersicum] 65 4e-15
ref|XP_004253217.1| PREDICTED: uncharacterized protein LOC101263... 64 2e-14
ref|XP_004229040.1| PREDICTED: uncharacterized protein LOC101252... 64 2e-14
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 67 1e-13
ref|XP_006354421.1| PREDICTED: uncharacterized protein LOC102596... 55 3e-12
ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266... 67 7e-12
ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251... 59 2e-10
ref|XP_006367854.1| PREDICTED: uncharacterized protein LOC102604... 48 4e-10
ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263... 72 7e-10
ref|XP_004246814.1| PREDICTED: uncharacterized protein LOC101252... 70 2e-09
ref|XP_004251372.1| PREDICTED: uncharacterized protein LOC101266... 69 3e-09
ref|XP_004253213.1| PREDICTED: uncharacterized protein LOC101256... 66 3e-08
>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
Length = 1475
Score = 69.7 bits (169), Expect(2) = 1e-15
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G ++WWR ++ GSPP +W + FL K+ P + RD+F + + G +VA+Y
Sbjct: 190 GPARQWWRTFIQTRPVGSPPVSWDEFSEAFLAKFIPRSVRDRLRDQFCRLEQGSMSVAEY 249
Query: 1179 EIHFHVLSSYAAPLLPT*DER 1241
E FH LS +A +LPT +ER
Sbjct: 250 ETRFHELSRHAEMILPTEEER 270
Score = 41.6 bits (96), Expect(2) = 1e-15
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 848 LGVVLNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFV 982
LGV L + F G EDA+EF+ + HE T+G+VE+ G F+
Sbjct: 140 LGVFLRLTPPRFSGAVGEDAHEFLTTCHERLRTLGLVESRGADFI 184
>gb|AAT39954.1| Putative integrase, identical [Solanum demissum]
Length = 1609
Score = 73.9 bits (180), Expect(2) = 2e-15
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G ++WWR ++ GSPP +W + FL K+ P L H RD+F + + G +VA+Y
Sbjct: 322 GPARQWWRTFIQTRPVGSPPVSWDEFSEAFLAKFIPRSLRDHLRDQFYRLEQGSISVAEY 381
Query: 1179 EIHFHVLSSYAAPLLPT*DER 1241
E FH LS +A +LPT +ER
Sbjct: 382 ETRFHELSRHADMILPTDEER 402
Score = 36.6 bits (83), Expect(2) = 2e-15
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 848 LGVVLNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFV 982
L V L + S F G +DA+EF+ + E T+G+VE+ G F+
Sbjct: 272 LSVFLRLTPSRFTGVMGQDAHEFLTTCRERLRTLGLVESRGADFI 316
>gb|ADU56214.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 317
Score = 64.7 bits (156), Expect(2) = 4e-15
Identities = 32/81 (39%), Positives = 44/81 (54%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G+ K WWR++V+ +PP TW + +F+EKY P L +RDEF + G +V Y
Sbjct: 211 GNAKMWWRSHVECQPTEAPPMTWASFSSLFMEKYFPRTLRDRKRDEFLSLEQGRMSVNAY 270
Query: 1179 EIHFHVLSSYAAPLLPT*DER 1241
E F LS YA L + ER
Sbjct: 271 EAKFRALSRYATQLCFSPQER 291
Score = 44.7 bits (104), Expect(2) = 4e-15
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2
Query: 860 LNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFV 982
L +K +F G EDAY+F++ HE H MGIVE GV FV
Sbjct: 165 LKLKPQVFKGAESEDAYDFLVDCHELLHKMGIVERCGVEFV 205
>ref|XP_004253217.1| PREDICTED: uncharacterized protein LOC101263890 [Solanum
lycopersicum]
Length = 490
Score = 63.9 bits (154), Expect(2) = 2e-14
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G+ K WWR++V+ +PP TW + +F+EKY P L +RDEF + G +V Y
Sbjct: 200 GNAKMWWRSHVECQPTEAPPMTWASFSSLFMEKYIPRTLRDRKRDEFLSLEQGRMSVNAY 259
Query: 1179 EIHFHVLSSYAAPL 1220
E F LS YA L
Sbjct: 260 EAKFRALSRYATQL 273
Score = 43.5 bits (101), Expect(2) = 2e-14
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 860 LNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFV 982
L +K +F G +DAY+F++ HE H MGIVE GV FV
Sbjct: 154 LKLKPPVFKGAESKDAYDFLVDCHELLHKMGIVERFGVEFV 194
>ref|XP_004229040.1| PREDICTED: uncharacterized protein LOC101252810 [Solanum
lycopersicum]
Length = 223
Score = 63.5 bits (153), Expect(2) = 2e-14
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G+ K WWR++++ +PP TW + F+EKY P L +RDEF + G +V Y
Sbjct: 126 GNAKMWWRSHIECQPTEAPPMTWTSFSSFFMEKYIPRTLRDRKRDEFLSLEQGRMSVNAY 185
Query: 1179 EIHFHVLSSYAAPLLPT*DER 1241
E F LS YA L + ER
Sbjct: 186 EAKFRALSRYATQLCFSPQER 206
Score = 43.5 bits (101), Expect(2) = 2e-14
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 860 LNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFV 982
L +K +F G EDAY+F++ HE H MGIV+ GV FV
Sbjct: 80 LKLKPPVFKGAESEDAYDFLVDCHELLHKMGIVKRFGVEFV 120
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 67.4 bits (163), Expect(3) = 1e-13
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G ++WWR+Y + GSP +W + FL ++ P + RD+F + + G TV++Y
Sbjct: 349 GPARQWWRSYRESRPVGSPHVSWSEFSEAFLARFMPRSVRDRLRDQFSRLEQGPMTVSEY 408
Query: 1179 EIHFHVLSSYAAPLLPT*DER 1241
E FH LS +A +LPT +ER
Sbjct: 409 ETRFHELSRHATMILPTEEER 429
Score = 35.0 bits (79), Expect(3) = 1e-13
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 848 LGVVLNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFVGPLAFRGCKR 1012
LGV + +F G EDAYEF ++ E ++G++E+ G F FRG R
Sbjct: 299 LGVFQRLALPIFSGAIGEDAYEFQLTCQEQLQSLGLLESRGADFTAH-QFRGPAR 352
Score = 21.6 bits (44), Expect(3) = 1e-13
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 1241 RVRCFVIGXXXXXXXXXXXXVVYGDLFEMVEKHAR 1345
RVRCFV G V G F V HAR
Sbjct: 429 RVRCFVRGLRYRLRVDTEHLVSAGRSFLDVVDHAR 463
>ref|XP_006354421.1| PREDICTED: uncharacterized protein LOC102596344 [Solanum tuberosum]
Length = 464
Score = 55.5 bits (132), Expect(2) = 3e-12
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*G 1157
G VK+WWRAY++ S+ PP TW +++ +FLEKY P L ++DEF + G
Sbjct: 129 GKVKQWWRAYMECRSSILPPLTWTQFHALFLEKYLPRTLRDLKKDEFMALEQG 181
Score = 44.3 bits (103), Expect(2) = 3e-12
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +2
Query: 860 LNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFV 982
L +K +F+G EDAYEFI+ ++ + +GIV+ HGV FV
Sbjct: 83 LKLKPPVFHGSETEDAYEFILDCYKRLYKLGIVQQHGVEFV 123
>ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266468 [Solanum
lycopersicum]
Length = 927
Score = 66.6 bits (161), Expect(3) = 7e-12
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G ++WWR Y + GSPP +W + FL ++ + RD+F + + G TV++Y
Sbjct: 229 GQARQWWRTYRESRPVGSPPISWSEFSEAFLARFMQRSVRDRLRDQFSRLEQGSMTVSEY 288
Query: 1179 EIHFHVLSSYAAPLLPT*DER 1241
E FH LS +A +LPT ER
Sbjct: 289 EAMFHELSRHATMILPTEGER 309
Score = 30.0 bits (66), Expect(3) = 7e-12
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 848 LGVVLNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFVGPLAFRGCKR 1012
LGV + +F G EDA+EF ++ E ++ ++E+ G F FRG R
Sbjct: 179 LGVFQRLAPPIFSGAIGEDAHEFELTCQEQLQSLCLLESRGADFTAH-QFRGQAR 232
Score = 21.2 bits (43), Expect(3) = 7e-12
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 1241 RVRCFVIGXXXXXXXXXXXXVVYGDLFEMVEKHAR 1345
R+RCFV G V G F V HAR
Sbjct: 309 RIRCFVRGLRYRLRVDTEHMVSAGRSFLDVVDHAR 343
>ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251787 [Solanum
lycopersicum]
Length = 945
Score = 58.5 bits (140), Expect(3) = 2e-10
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +3
Query: 1008 KEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQYEIH 1187
++WWR + + GSP +W + FL ++ P + RD+F + + TV++YE
Sbjct: 239 RQWWRTHRESRPVGSPIISWSEFSEAFLAQFMPQSVRDRLRDQFSRLEQVSMTVSEYEAR 298
Query: 1188 FHVLSSYAAPLLPT*DER 1241
FH LS +A +LPT ER
Sbjct: 299 FHELSRHATMILPTEGER 316
Score = 32.7 bits (73), Expect(3) = 2e-10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 848 LGVVLNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSF 979
LGV + +F G EDA+EF ++ E ++G++E+ G F
Sbjct: 186 LGVFQRLAPPIFLGAIGEDAHEFKLTCQEQLQSLGLLESRGADF 229
Score = 21.6 bits (44), Expect(3) = 2e-10
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 1241 RVRCFVIGXXXXXXXXXXXXVVYGDLFEMVEKHAR 1345
RVRCFV G V G F V HAR
Sbjct: 316 RVRCFVRGLRYRLRVDTEHMVSAGRSFIDVVDHAR 350
>ref|XP_006367854.1| PREDICTED: uncharacterized protein LOC102604402 [Solanum tuberosum]
Length = 553
Score = 47.8 bits (112), Expect(2) = 4e-10
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKY 1100
G+ K+WWR YV S PP TW+++Y +FLEKY
Sbjct: 110 GETKQWWRTYVKCRSPVFPPLTWMQFYVLFLEKY 143
Score = 44.7 bits (104), Expect(2) = 4e-10
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 842 EDLGVVLNMKHSMFYGQPKEDAYEFIMSIHES*HTMGIVETHGVSFV 982
E L L +K +F+G EDAYEFI+ +E H +GIV +GV FV
Sbjct: 58 EMLTKFLKLKSLVFHGFESEDAYEFILDCYERFHKLGIVHRYGVEFV 104
>ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263429 [Solanum
lycopersicum]
Length = 413
Score = 71.6 bits (174), Expect = 7e-10
Identities = 55/206 (26%), Positives = 81/206 (39%)
Frame = +3
Query: 624 LLSILDGFAQIGIHPTILDSS*NCVGGEKTQTF*FHTPDIQSAVMLVPHINEVHAPEFGL 803
+L IL+G AQ G P D S VGG+ TPD ++ P + + P+
Sbjct: 1 MLGILEGIAQAGALPVSSDGSQTRVGGQ--------TPD----PIVAPSFDSMEFPDMTS 48
Query: 804 HHIRGTIMTRDEQKI*E*F*T*SIQCFXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXX 983
H + MT DEQK+
Sbjct: 49 HLVNRPSMTIDEQKMLH------------------------------NLGLVESHGVDYT 78
Query: 984 XXXXXGDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCS 1163
G +WWR Y+ GS P +W ++ +VFL K+ P +R +F+ +
Sbjct: 79 TFQMTGSANQWWRDYISSRPVGSHPLSWTQFTQVFLSKFFPRSERERKRAQFEGLQQNGM 138
Query: 1164 TVAQYEIHFHVLSSYAAPLLPT*DER 1241
+VA+YE FH L+ A+ +LPT DER
Sbjct: 139 SVAEYEGKFHALARNASMILPTEDER 164
>ref|XP_004246814.1| PREDICTED: uncharacterized protein LOC101252518 [Solanum
lycopersicum]
Length = 588
Score = 70.5 bits (171), Expect = 2e-09
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G K+WWR Y+ AGS P +W ++ +VFL K+ P +R EF+ + G +VA+Y
Sbjct: 57 GSAKQWWRDYISSRPAGSSPLSWTQFTQVFLSKFIPHSERERKRTEFEGLQQGSMSVAEY 116
Query: 1179 EIHFHVLSSYAAPLLPT*DER 1241
E FH L+ +A+ +LPT ER
Sbjct: 117 EGKFHALARHASMILPTEAER 137
>ref|XP_004251372.1| PREDICTED: uncharacterized protein LOC101266485 [Solanum
lycopersicum]
Length = 1288
Score = 69.3 bits (168), Expect = 3e-09
Identities = 56/226 (24%), Positives = 84/226 (37%), Gaps = 10/226 (4%)
Frame = +3
Query: 498 IRSQSLESYIEPQDELLE-------EGMGPGQDQPRFITTPIPQDTLVRLLSILDGFAQI 656
I +Q + + P ++L EG GP Q I P+ QDTL R+L IL+G AQ
Sbjct: 50 IATQGHDRTVPPNADVLHGDVQDHVEGDGPAQAPTSTIVPPVLQDTLARMLGILEGMAQA 109
Query: 657 GIHPTILDSS*NCVGGEKTQTF---*FHTPDIQSAVMLVPHINEVHAPEFGLHHIRGTIM 827
G P D S VGG+ TP Q A + P ++ + P+ H + M
Sbjct: 110 GALPVTSDGSQTRVGGQTPDPIVAPDSQTPRTQPAAAVAPLLDSMEFPDMTSHLVNRPSM 169
Query: 828 TRDEQKI*E*F*T*SIQCFXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXGDV 1007
T DEQK+ G
Sbjct: 170 TIDEQKM-----------------------------------FVESHGVDYTAFQMTGSA 194
Query: 1008 KEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQK 1145
K+WWR Y+ GS P +W + + ++ + L + RR+ F++
Sbjct: 195 KQWWRDYISSRPTGSHPLSWTEFIQKVVDAAKELEMI--RREGFEQ 238
>ref|XP_004253213.1| PREDICTED: uncharacterized protein LOC101256466 [Solanum
lycopersicum]
Length = 164
Score = 66.2 bits (160), Expect = 3e-08
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +3
Query: 999 GDVKEWWRAYVDYMSAGSPPSTWVRYYRVFLEKYEPLRLCLHRRDEFQKFK*GCSTVAQY 1178
G K+WWR Y+ GSPP +W ++ +FL K++P +R +F+ + G +VA+Y
Sbjct: 3 GAAKQWWRYYISSRPVGSPPVSWTQFTYIFLSKFDPRSERECKRSKFEGLQQGGMSVAEY 62
Query: 1179 EIHFHVLSSYAAPLLPT*DER 1241
+ FH L+ A+ +LPT ER
Sbjct: 63 DSTFHALARPASMILPTEAER 83