BLASTX nr result
ID: Atropa21_contig00011081
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00011081 (867 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 147 4e-33 gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 145 2e-32 gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 145 2e-32 emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 142 1e-31 emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 142 1e-31 gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 142 2e-31 emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 141 4e-31 ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 141 4e-31 emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 141 4e-31 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 141 4e-31 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 139 1e-30 gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 139 2e-30 gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 138 3e-30 ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 137 5e-30 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 135 2e-29 ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 135 2e-29 emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 135 3e-29 gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 133 1e-28 gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 133 1e-28 gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 132 1e-28 >emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] Length = 1181 Score = 147 bits (372), Expect = 4e-33 Identities = 89/255 (34%), Positives = 128/255 (50%), Gaps = 37/255 (14%) Frame = +3 Query: 195 GWFCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWF 374 G + P K +E+ A+ V V C S ++W+LD+ACT HM RDWF Sbjct: 260 GKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTS--DQWILDTACTYHMCPNRDWF 317 Query: 375 SSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK----------- 518 ++YE GGTV+M ++ + GIG V+++ DG +RT+++V H+P+LK Sbjct: 318 ATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDR 377 Query: 519 ---------------KNXXXX*KAS*RTT-FTHWQEAPLLA---------LHDDKARL*Y 623 K KAS ++ H Q +L + D L + Sbjct: 378 KGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWH 437 Query: 624 MRLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHS 803 MRLGHM+ G LS R LL G+ S L+FC+HC+ K K+ F+T H T +LDY+HS Sbjct: 438 MRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 497 Query: 804 DLWGPSKLPSKGGKR 848 DLWGP++ S GG R Sbjct: 498 DLWGPARKTSFGGAR 512 >gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1138 Score = 145 bits (366), Expect = 2e-32 Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 14/228 (6%) Frame = +3 Query: 201 FCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSS 380 + P K +E+ A+ V V C S ++W+LD+ACT HM RDWF++ Sbjct: 204 YIPKGKKEEEGKAAIVTDEKSDAELLVAYAGCAQTS--DQWILDTACTYHMCPNRDWFAT 261 Query: 381 YEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*KAS*RT 557 YE GGTV+M ++ + GIG V+++ DG +RT+++V H P+LK++ + R Sbjct: 262 YEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKRSLISL-RTLDRK 320 Query: 558 TFTHWQEAPLLAL-------------HDDKARL*YMRLGHMNARGREMLSNRNLLKGEKF 698 + + +L L + D L +MRLGHM+ G LS R LL G+ Sbjct: 321 GYKYSGGDGILKLILGNVAVVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSI 380 Query: 699 STLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWGPSKLPSKGG 842 L+FC+HC+ K K+ F+T H T LDY+HSDLWGP++ S GG Sbjct: 381 GKLKFCEHCIFGKHKRVKFNTSTHTTEGTLDYVHSDLWGPARKTSFGG 428 >gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 867 Score = 145 bits (365), Expect = 2e-32 Identities = 86/251 (34%), Positives = 124/251 (49%), Gaps = 39/251 (15%) Frame = +3 Query: 204 CPTTKSKEKA--SASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFS 377 CP + KEK A+ E D ++D L +S + Y ++W+LDS CT HM RDWF Sbjct: 184 CPKLQKKEKVLQDANVAECKSDVESDISLIVSLSASLYLDEWILDSGCTYHMCPIRDWFF 243 Query: 378 SY-EKSGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLKKN---------- 524 + E GG V M N+ VGIG ++LR HDG+ R + +V +VP LKKN Sbjct: 244 EFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESK 303 Query: 525 ----------------XXXX*KAS*RTTFTHWQEAPLLAL----------HDDKARL*YM 626 K + ++Q + ++ + +L +M Sbjct: 304 GLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHM 363 Query: 627 RLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSD 806 RLGH + ++ + + LLKG K LEFC+HCVL K ++ F T H T +LDY+HSD Sbjct: 364 RLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSD 423 Query: 807 LWGPSKLPSKG 839 +WGP+K PS G Sbjct: 424 VWGPAKTPSIG 434 >emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] Length = 1037 Score = 142 bits (359), Expect = 1e-31 Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 37/255 (14%) Frame = +3 Query: 195 GWFCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWF 374 G + P K +++ A+ V V C S ++W+LD+ACT HM RDWF Sbjct: 77 GKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTS--DQWILDTACTYHMCPNRDWF 134 Query: 375 SSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK----------- 518 ++YE GGTV+M ++ + GIG V+++ DG +RT+++V H+P+LK Sbjct: 135 ATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDC 194 Query: 519 ---------------KNXXXX*KAS*RTT-FTHWQEAPLLA---------LHDDKARL*Y 623 K KA ++ H Q +L + D L + Sbjct: 195 KGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWH 254 Query: 624 MRLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHS 803 MRLGHM+ G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HS Sbjct: 255 MRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 314 Query: 804 DLWGPSKLPSKGGKR 848 DLWGP++ S GG R Sbjct: 315 DLWGPARKTSFGGAR 329 >emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] Length = 1205 Score = 142 bits (359), Expect = 1e-31 Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 37/255 (14%) Frame = +3 Query: 195 GWFCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWF 374 G + P K +++ A+ V V C S ++W+LD+ACT HM RDWF Sbjct: 245 GKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTS--DQWILDTACTYHMCPNRDWF 302 Query: 375 SSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK----------- 518 ++YE GGTV+M ++ + GIG V+++ DG +RT+++V H+P+LK Sbjct: 303 ATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDC 362 Query: 519 ---------------KNXXXX*KAS*RTT-FTHWQEAPLLA---------LHDDKARL*Y 623 K KA ++ H Q +L + D L + Sbjct: 363 KGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWH 422 Query: 624 MRLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHS 803 MRLGHM+ G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HS Sbjct: 423 MRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 482 Query: 804 DLWGPSKLPSKGGKR 848 DLWGP++ S GG R Sbjct: 483 DLWGPARKTSFGGAR 497 >gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1131 Score = 142 bits (357), Expect = 2e-31 Identities = 84/249 (33%), Positives = 121/249 (48%), Gaps = 38/249 (15%) Frame = +3 Query: 216 KSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSSYE--K 389 K K AS V +SD+ L + + ++W+LD+AC+ H+ RDWFSSY+ + Sbjct: 207 KRKSDGKASVVTSAENSDSGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSSYKSVQ 266 Query: 390 SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*---------- 539 +G V M ++ IVGIG V+++ HDG RT+ +V ++P + +N Sbjct: 267 NGDVVRMGDDNPHEIVGIGSVQIKTHDGMTRTLKDVRYIPGMARNLISLSTLDAEGYKYS 326 Query: 540 ---------KAS*RTTFTHWQEAPLLALHDD-----------------KARL*YMRLGHM 641 K S + A L L K L +MRLGHM Sbjct: 327 GLGGVVKVSKGSLVYMISDMNSANLYVLRGSTLHGSVTAAAVSKDEPSKTNLWHMRLGHM 386 Query: 642 NARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWGPS 821 + G L RNLL G ++FC+HCV K K+ F+T H+T +LDY+H+DLWGPS Sbjct: 387 SELGMAELMKRNLLDGYTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPS 446 Query: 822 KLPSKGGKR 848 + PS GG R Sbjct: 447 RKPSLGGAR 455 >emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] Length = 944 Score = 141 bits (355), Expect = 4e-31 Identities = 85/255 (33%), Positives = 125/255 (49%), Gaps = 37/255 (14%) Frame = +3 Query: 195 GWFCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWF 374 G + P K +E+ A+ V V C S ++W+LD+ACT HM RDWF Sbjct: 92 GKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTS--DQWILDTACTYHMCPNRDWF 149 Query: 375 SSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK----------- 518 ++YE GGTV+M ++ + GIG V+++ DG + T+++V H+P+LK Sbjct: 150 ATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDR 209 Query: 519 ---------------KNXXXX*KAS*RTT-FTHWQEAPLLA---------LHDDKARL*Y 623 K KA ++ H + +L + D L + Sbjct: 210 KGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWH 269 Query: 624 MRLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHS 803 MRLGHM+ G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HS Sbjct: 270 MRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 329 Query: 804 DLWGPSKLPSKGGKR 848 DLWGP++ S GG R Sbjct: 330 DLWGPARKTSFGGAR 344 >ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] Length = 778 Score = 141 bits (355), Expect = 4e-31 Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 37/248 (14%) Frame = +3 Query: 216 KSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSSYEK-S 392 K +E+ A+ V V + C S ++W+LD+ACT HM RDWF++YE Sbjct: 233 KKEEEGKAAVVTDEKSDAELLVAYVGCAQTS--DQWILDTACTYHMCPNRDWFATYETVQ 290 Query: 393 GGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK------------------ 518 GGTV+M ++ + GIG V+++ DG +RT+++V H+P+LK Sbjct: 291 GGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYKYSG 350 Query: 519 --------KNXXXX*KAS*RTT-FTHWQEAPLLA---------LHDDKARL*YMRLGHMN 644 K KA ++ H + +L + D L +MRLGHM+ Sbjct: 351 GDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMS 410 Query: 645 ARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWGPSK 824 G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HSDLWGP++ Sbjct: 411 EIGLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPAR 470 Query: 825 LPSKGGKR 848 S GG R Sbjct: 471 KTSFGGAR 478 >emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] Length = 944 Score = 141 bits (355), Expect = 4e-31 Identities = 85/255 (33%), Positives = 125/255 (49%), Gaps = 37/255 (14%) Frame = +3 Query: 195 GWFCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWF 374 G + P K +E+ A+ V V C S ++W+LD+ACT HM RDWF Sbjct: 92 GKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTS--DQWILDTACTYHMCPNRDWF 149 Query: 375 SSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK----------- 518 ++YE GGTV+M ++ + GIG V+++ DG + T+++V H+P+LK Sbjct: 150 ATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDR 209 Query: 519 ---------------KNXXXX*KAS*RTT-FTHWQEAPLLA---------LHDDKARL*Y 623 K KA ++ H + +L + D L + Sbjct: 210 KGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWH 269 Query: 624 MRLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHS 803 MRLGHM+ G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HS Sbjct: 270 MRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 329 Query: 804 DLWGPSKLPSKGGKR 848 DLWGP++ S GG R Sbjct: 330 DLWGPARKTSFGGAR 344 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 141 bits (355), Expect = 4e-31 Identities = 85/253 (33%), Positives = 123/253 (48%), Gaps = 37/253 (14%) Frame = +3 Query: 201 FCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSS 380 + P K +E+ A+ V V C S ++W+LD+ACT HM RDWF++ Sbjct: 171 YIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTS--DQWILDTACTYHMCPNRDWFAT 228 Query: 381 YEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK------------- 518 YE GGTV+M ++ + GIG V+++ DG +RT+ +V H+P+LK Sbjct: 229 YEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKG 288 Query: 519 -------------KNXXXX*KAS*R-TTFTHWQEAPLLA---------LHDDKARL*YMR 629 K KA + H + +L + D L +MR Sbjct: 289 YKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMR 348 Query: 630 LGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDL 809 LGHM+ G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HSDL Sbjct: 349 LGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDL 408 Query: 810 WGPSKLPSKGGKR 848 WGP++ S GG R Sbjct: 409 WGPARKTSFGGAR 421 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 139 bits (350), Expect = 1e-30 Identities = 86/256 (33%), Positives = 127/256 (49%), Gaps = 39/256 (15%) Frame = +3 Query: 204 CPTTKS---KEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWF 374 CP K K+ SA+ E +S+ D L ++ + + + WVLDS + H+ RR+WF Sbjct: 238 CPKKKKQSEKQSVSAAVAEEDTNSEEDIAL-VADEHTHHSDVWVLDSGASYHICPRREWF 296 Query: 375 SSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*---- 539 ++YE+ GG++ M+N++ +VG G +++R HDG+ T+ EV HVP + KN Sbjct: 297 TTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDS 356 Query: 540 ----------------------KAS*RTTFTHWQEAPLLAL---------HDDKARL*YM 626 K R T Q + + D +L ++ Sbjct: 357 KGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHI 416 Query: 627 RLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSD 806 RLGHM RG ++LS +LL G K +LEFC+HCV K + F H+T LDYIHSD Sbjct: 417 RLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSD 476 Query: 807 LWGPSKLPSKGGKRSF 854 WGP ++ S GG R F Sbjct: 477 CWGPCRVESLGGCRFF 492 >gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group] gi|53370655|gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica Group] gi|108710286|gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1322 Score = 139 bits (349), Expect = 2e-30 Identities = 84/249 (33%), Positives = 119/249 (47%), Gaps = 38/249 (15%) Frame = +3 Query: 216 KSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSSYE--K 389 K K AS V +SD+ L + + ++W+LD+AC+ H+ RDWFSSY+ + Sbjct: 257 KRKSDGKASVVTSAENSDSGDCLVVFAGYVASHDEWILDTACSFHICINRDWFSSYKSVQ 316 Query: 390 SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*---------- 539 + V M ++ IVGIG V+++ HDG RT+ +V H+P + +N Sbjct: 317 NEDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYS 376 Query: 540 ---------KAS*RTTFTHWQEAPLLALHDD-----------------KARL*YMRLGHM 641 K S A L L K L +MRLGHM Sbjct: 377 GSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEPSKTNLWHMRLGHM 436 Query: 642 NARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWGPS 821 + G L RNLL G ++FC+HCV K K+ F+T H+T +LDY+H+DLWGPS Sbjct: 437 SELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPS 496 Query: 822 KLPSKGGKR 848 + PS GG R Sbjct: 497 RKPSLGGAR 505 >gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group] gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1175 Score = 138 bits (347), Expect = 3e-30 Identities = 84/249 (33%), Positives = 119/249 (47%), Gaps = 38/249 (15%) Frame = +3 Query: 216 KSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSSYE--K 389 K K AS V +SD+ L + S ++W+LD+ C+ H+ RDWFSSY+ + Sbjct: 152 KRKSDGKASVVTSADNSDSGDCLVVFVVCVSSHDEWILDTTCSFHICINRDWFSSYKSVQ 211 Query: 390 SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*---------- 539 +G V M ++ IVGIG V+++ HDG RT+ +V H+P + +N Sbjct: 212 NGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEGYKYS 271 Query: 540 ---------KAS*RTTFTHWQEAPLLALHDD-----------------KARL*YMRLGHM 641 K S A L L K + +MRLGHM Sbjct: 272 GSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGYVTAAVVSKDEPSKTNMWHMRLGHM 331 Query: 642 NARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWGPS 821 + G L RNLL G ++FC+HCV K K+ F+T H+T +LDY+H+DLWGPS Sbjct: 332 SELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPS 391 Query: 822 KLPSKGGKR 848 + PS GG R Sbjct: 392 RKPSLGGAR 400 >ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha] Length = 1773 Score = 137 bits (345), Expect = 5e-30 Identities = 85/253 (33%), Positives = 124/253 (49%), Gaps = 34/253 (13%) Frame = +3 Query: 192 KGWFCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDW 371 KG + P K +E+ A+ V C S E W+LD+ CT HM RDW Sbjct: 201 KGNYKPKGKQEEQGKAAVATDNKPDAELLVAYAGCVQTSDE--WLLDTGCTYHMCPNRDW 258 Query: 372 FSSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*--- 539 F++YE GG V+M +N + G+G ++++ DG +RT+++V H+P LK+N Sbjct: 259 FTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLD 318 Query: 540 -----------------------KAS*RTT-FTHWQEAPLL----ALHDDKAR--L*YMR 629 KA + H Q ++ A+ D + L +MR Sbjct: 319 RKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIVGNVAAVTDSLSNSDLWHMR 378 Query: 630 LGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDL 809 LGHM+ G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HSDL Sbjct: 379 LGHMSEIGLAELSKRGLLDGQNIGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVHSDL 438 Query: 810 WGPSKLPSKGGKR 848 WGP++ S GG R Sbjct: 439 WGPARKRSFGGAR 451 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 135 bits (340), Expect = 2e-29 Identities = 83/255 (32%), Positives = 123/255 (48%), Gaps = 37/255 (14%) Frame = +3 Query: 195 GWFCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWF 374 G + P K +E+ A+ V V C S ++W+L++AC HM RDWF Sbjct: 467 GKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTS--DQWILNTACIYHMCPNRDWF 524 Query: 375 SSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK----------- 518 ++YE GTV+M ++ + GIG V+++ DG +RT+++V H+P+LK Sbjct: 525 ATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDR 584 Query: 519 ---------------KNXXXX*KAS*RTT-FTHWQEAPLLA---------LHDDKARL*Y 623 K KA ++ H + +L + D L + Sbjct: 585 KGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWH 644 Query: 624 MRLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHS 803 MRLGHM G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HS Sbjct: 645 MRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 704 Query: 804 DLWGPSKLPSKGGKR 848 DLWGP++ S GG R Sbjct: 705 DLWGPARKTSFGGTR 719 >ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] Length = 1601 Score = 135 bits (340), Expect = 2e-29 Identities = 83/255 (32%), Positives = 123/255 (48%), Gaps = 37/255 (14%) Frame = +3 Query: 195 GWFCPTTKSKEKASASTVEHVHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWF 374 G + P K +E+ A+ V V C S ++W+L++AC HM RDWF Sbjct: 260 GKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTS--DQWILNTACIYHMCPNRDWF 317 Query: 375 SSYEK-SGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLK----------- 518 ++YE GTV+M ++ + GIG V+++ DG +RT+++V H+P+LK Sbjct: 318 ATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDR 377 Query: 519 ---------------KNXXXX*KAS*RTT-FTHWQEAPLLA---------LHDDKARL*Y 623 K KA ++ H + +L + D L + Sbjct: 378 KGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWH 437 Query: 624 MRLGHMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHS 803 MRLGHM G LS R LL G+ L+FC+HC+ K K+ F+T H T +LDY+HS Sbjct: 438 MRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHS 497 Query: 804 DLWGPSKLPSKGGKR 848 DLWGP++ S GG R Sbjct: 498 DLWGPARKTSFGGTR 512 >emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] Length = 1335 Score = 135 bits (339), Expect = 3e-29 Identities = 85/251 (33%), Positives = 121/251 (48%), Gaps = 40/251 (15%) Frame = +3 Query: 216 KSKEKASASTVEH-VHDSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSSYE-- 386 K+K+ S V D D+ L + + ++W+LDSAC+ H+ +R+WFSSY+ Sbjct: 256 KNKKDGKVSVASAAVSDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPV 315 Query: 387 KSGGTVVMSNNATFAIVGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*-------KA 545 + G V M ++ AIVGIG V+++ DG RT+ V ++P + +N K Sbjct: 316 QKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKY 375 Query: 546 S*RTTFTHWQEAPLLALHDD------------------------------KARL*YMRLG 635 S + L+ L D K L +MRLG Sbjct: 376 SGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLPGSDSAAAAVTNDEPSKTNLWHMRLG 435 Query: 636 HMNARGREMLSNRNLLKGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWG 815 HM+ G L RNLLKG S ++FC+HC+ K K+ F+T H T LDY+H+DLWG Sbjct: 436 HMSHLGMTELMKRNLLKGYTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWG 495 Query: 816 PSKLPSKGGKR 848 PSK PS GG R Sbjct: 496 PSKKPSLGGAR 506 >gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1333 Score = 133 bits (334), Expect = 1e-28 Identities = 80/235 (34%), Positives = 114/235 (48%), Gaps = 39/235 (16%) Frame = +3 Query: 261 DSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSSYE--KSGGTVVMSNNATFAI 434 D D+ L + + ++W+LDSAC+ H+ +R+WFSSY+ + G V M ++ AI Sbjct: 270 DDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAI 329 Query: 435 VGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*KAS*R-------------------- 554 VGIG V+++ DG RT+ V ++P + +N Sbjct: 330 VGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVC 389 Query: 555 ---------------TTFTHWQEAPLLALHDD--KARL*YMRLGHMNARGREMLSNRNLL 683 T T A +D+ K L +MRLGHM+ G L RNLL Sbjct: 390 LKGDLNSAKLYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLL 449 Query: 684 KGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWGPSKLPSKGGKR 848 KG S ++FC+HC+ K K+ F+T H T LDY+H+DLWGPSK PS GG R Sbjct: 450 KGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGAR 504 >gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1333 Score = 133 bits (334), Expect = 1e-28 Identities = 80/235 (34%), Positives = 114/235 (48%), Gaps = 39/235 (16%) Frame = +3 Query: 261 DSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSSYE--KSGGTVVMSNNATFAI 434 D D+ L + + ++W+LDSAC+ H+ +R+WFSSY+ + G V M ++ AI Sbjct: 270 DDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAI 329 Query: 435 VGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*KAS*R-------------------- 554 VGIG V+++ DG RT+ V ++P + +N Sbjct: 330 VGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVC 389 Query: 555 ---------------TTFTHWQEAPLLALHDD--KARL*YMRLGHMNARGREMLSNRNLL 683 T T A +D+ K L +MRLGHM+ G L RNLL Sbjct: 390 LKGDLNSAKLYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLL 449 Query: 684 KGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWGPSKLPSKGGKR 848 KG S ++FC+HC+ K K+ F+T H T LDY+H+DLWGPSK PS GG R Sbjct: 450 KGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGAR 504 >gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77549942|gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1373 Score = 132 bits (333), Expect = 1e-28 Identities = 80/235 (34%), Positives = 114/235 (48%), Gaps = 39/235 (16%) Frame = +3 Query: 261 DSDNDYVLTISCNNESYENKWVLDSACTLHMMFRRDWFSSYE--KSGGTVVMSNNATFAI 434 D D+ L + + ++W+LDSAC+ H+ +R+WFSSY+ + G V M ++ AI Sbjct: 270 DDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAI 329 Query: 435 VGIG*VRLRCHDGTVRTVTEVLHVPDLKKNXXXX*KAS*R-------------------- 554 VGIG V+++ DG RT+ V ++P + +N Sbjct: 330 VGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVC 389 Query: 555 ---------------TTFTHWQEAPLLALHDD--KARL*YMRLGHMNARGREMLSNRNLL 683 T T A +D+ K L +MRLGHM+ G L RNLL Sbjct: 390 LKGDVNSAKLYVLRGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLL 449 Query: 684 KGEKFSTLEFCKHCVLEK*KKASFSTGKHQTGRVLDYIHSDLWGPSKLPSKGGKR 848 KG S ++FC+HC+ K K+ F+T H T LDY+H+DLWGPSK PS GG R Sbjct: 450 KGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGAR 504