BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00011052
         (2482 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containi...   566   0.0  
gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]     430   0.0  
gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p...   426   0.0  
gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlise...   412   0.0  
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   464   0.0  
ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citr...   447   0.0  
emb|CBI32614.3| unnamed protein product [Vitis vinifera]              424   0.0  
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr...   434   e-179
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi...   431   e-178
ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi...   430   e-178
ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Caps...   429   e-177
ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thalian...   425   e-175
dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]           425   e-174
ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containi...   431   e-171
ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containi...   431   e-171
gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus...   430   e-170
ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [S...   341   e-147
tpg|DAA58005.1| TPA: hypothetical protein ZEAMMB73_979671 [Zea m...   339   e-146
ref|XP_004969633.1| PREDICTED: pentatricopeptide repeat-containi...   331   e-144
ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [A...   358   e-135

>ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Solanum tuberosum]
          Length = 738

 Score =  566 bits (1459), Expect(2) = 0.0
 Identities = 303/384 (78%), Positives = 315/384 (82%), Gaps = 2/384 (0%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTDVFAKLLPNSVNSRDNEPPELSQVFELNSR 1149
            KVVQAMREGR+DLCK+LRE N+EE+C ND+DVF KLLPNSVN RDNEPPELS+VFE NSR
Sbjct: 314  KVVQAMREGRRDLCKMLREGNVEEVCLNDSDVFDKLLPNSVNWRDNEPPELSRVFEPNSR 373

Query: 1150 MYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMDRAREVL 1329
            MYTTLMKGYMNAGRVTDMVRMLEAMRHL DSESHPDHVTYTTVISAFVKQGLMDRAREVL
Sbjct: 374  MYTTLMKGYMNAGRVTDMVRMLEAMRHLGDSESHPDHVTYTTVISAFVKQGLMDRAREVL 433

Query: 1330 AEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MIDTGIEPDVVSYNTIIDGCILV 1509
            AEMVRIGVP NRVTYNVLIKGY QQLHID AE+LIK MIDTGIEPDVVSYNTIIDGCILV
Sbjct: 434  AEMVRIGVPANRVTYNVLIKGYCQQLHIDMAEELIKEMIDTGIEPDVVSYNTIIDGCILV 493

Query: 1510 DDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDPRVKVDLVA 1689
            DD AGALSYFNEMRARGIAPTKVSYT+LMKAFASSGQAKLANKVFD+MLKDPRVKVDLVA
Sbjct: 494  DDCAGALSYFNEMRARGIAPTKVSYTTLMKAFASSGQAKLANKVFDEMLKDPRVKVDLVA 553

Query: 1690 WNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEALLLWNEIK 1869
            WNMLVD YSKLGKVEEAKSVIERMK NGFYPNV TYGSLAN I LARKPGEALLLWNEIK
Sbjct: 554  WNMLVDAYSKLGKVEEAKSVIERMKENGFYPNVATYGSLANGIALARKPGEALLLWNEIK 613

Query: 1870 HRWD-GKWRRVESFFGYPTIGT**RTIRYFGRYVSGQXXXXXXXXXXXXXXNMGYHQIK- 2043
             R   G         G P +      +                          G    K 
Sbjct: 614  QRCGMGNGEESIPSSGVPPLEPDEGLLDTLADICVRAAFFKKALEIVACMEQHGIPPNKT 673

Query: 2044 QFTRIYVEMHSRMFTSKHASHARQ 2115
            +FTRIYVEMHSRMFTSKHAS ARQ
Sbjct: 674  KFTRIYVEMHSRMFTSKHASRARQ 697



 Score =  272 bits (696), Expect(2) = 0.0
 Identities = 134/156 (85%), Positives = 148/156 (94%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A+SIIKSMLKSGYLPHVKAWSSV+SRLASSGDDGP+E+L LF AVTKR+ R ++LDLVKH
Sbjct: 159 AASIIKSMLKSGYLPHVKAWSSVVSRLASSGDDGPIESLGLFRAVTKRIRRLSNLDLVKH 218

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           S PDTAAYNAVLNACA++GDKNRFLELF+EM EF+CEPDVL+Y+VMIKLCAR DRKDLLV
Sbjct: 219 SLPDTAAYNAVLNACANLGDKNRFLELFNEMSEFDCEPDVLSYNVMIKLCARGDRKDLLV 278

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+ILEKG PLCMSTFQSLVAAYVGFGDLVTAEK
Sbjct: 279 FVLERILEKGIPLCMSTFQSLVAAYVGFGDLVTAEK 314



 Score =  116 bits (291), Expect = 4e-23
 Identities = 63/96 (65%), Positives = 70/96 (72%), Gaps = 9/96 (9%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKT----VY*DLCRDAFKDVY-----Q*ACIT 2105
            L  ICVRAAFFKKALEIVACMEQHGIPPNKT    +Y ++    F   +     Q     
Sbjct: 643  LADICVRAAFFKKALEIVACMEQHGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRKE 702

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSVIEDEYRSE 2213
            R  AA+AFKFWLGLPNSYYGSEWRLDSVI+DEY+SE
Sbjct: 703  RKRAAEAFKFWLGLPNSYYGSEWRLDSVIDDEYKSE 738


>gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]
          Length = 749

 Score =  430 bits (1105), Expect(4) = 0.0
 Identities = 213/307 (69%), Positives = 257/307 (83%), Gaps = 2/307 (0%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTDVFAKLLPNSVNSRDNEPPEL-SQVFELNS 1146
            ++VQAMRE R+DLC+ILR +N+E+   N+ DVF +LLPN V + D+E P+L  + +  +S
Sbjct: 316  RMVQAMREERRDLCEILRGSNVEDSNRNEQDVFERLLPNLVKASDSEQPQLLPKAYAPDS 375

Query: 1147 RMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMDRAREV 1326
            R+YTTLMKGYM AGRVTD VRMLEAMRH  DS SHPDHV+YTTV+SAFV  G MDRAR+V
Sbjct: 376  RIYTTLMKGYMKAGRVTDTVRMLEAMRHQEDSASHPDHVSYTTVVSAFVNSGSMDRARQV 435

Query: 1327 LAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MI-DTGIEPDVVSYNTIIDGCI 1503
             AEM RI VP NR+TYN+L+KGY +QL ID+A++L+K M  D GIEPDVVSYN +IDGCI
Sbjct: 436  FAEMTRIRVPANRITYNILLKGYCKQLQIDKAKELLKEMAEDAGIEPDVVSYNILIDGCI 495

Query: 1504 LVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDPRVKVDL 1683
            LVDDSAGAL++FNEMRA+GIAPTK+SYT+LMKAFA SGQ KLA+KVFD+ML DPRVK D+
Sbjct: 496  LVDDSAGALTFFNEMRAKGIAPTKISYTTLMKAFALSGQPKLAHKVFDEMLDDPRVKADI 555

Query: 1684 VAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEALLLWNE 1863
            +AWNMLV+ Y KLG VEEAK +++RMK NGF+PNV TYGSLAN I +ARKPGEALLLWNE
Sbjct: 556  IAWNMLVEGYCKLGLVEEAKKIVQRMKENGFHPNVATYGSLANGIAVARKPGEALLLWNE 615

Query: 1864 IKHRWDG 1884
            +K R  G
Sbjct: 616  VKERCGG 622



 Score =  217 bits (552), Expect(4) = 0.0
 Identities = 108/157 (68%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDD-GPMEALKLFGAVTKRVHRFTDLDLVK 682
           A+S+IKSML+SGYLPHVK+WS+V SRLA+SGD+ GP EALK+F +VT+RV +F + +L  
Sbjct: 160 AASVIKSMLRSGYLPHVKSWSAVASRLAASGDECGPAEALKMFRSVTRRVRQFANGELAA 219

Query: 683 HSRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLL 862
            SRPDT A+NAVLNACA+ GD   FL+LFDEM E+ C PDVL+Y+VMIKLC RA RKDLL
Sbjct: 220 DSRPDTGAFNAVLNACANCGDTRMFLKLFDEMPEWGCGPDVLSYNVMIKLCTRAGRKDLL 279

Query: 863 VFVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           VFVLE+ILE+  P CM+T  SLVAAYVGFGDL TAE+
Sbjct: 280 VFVLERILEEEIPFCMTTMHSLVAAYVGFGDLETAER 316



 Score = 97.8 bits (242), Expect(4) = 0.0
 Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  ICVRAAFFKKALEIVACME++GIPPNKT Y  +  +    ++         Q     
Sbjct: 652  LADICVRAAFFKKALEIVACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASQARQDRRRE 711

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSVIEDEYRSE 2213
            +  AA+AFKFWLGLPNSYYGSEWRL+ +  ++Y S+
Sbjct: 712  KKRAAEAFKFWLGLPNSYYGSEWRLEPIDGNDYFSD 747



 Score = 38.5 bits (88), Expect(4) = 0.0
 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
 Frame = +2

Query: 1874 GGMGNGDESNP-SSGIPP---LEHDEGLLDTLADMC 1969
            GGM    E NP SS  PP   L+ DEGLLDTLAD+C
Sbjct: 621  GGMKKEGEENPDSSSTPPPPLLKPDEGLLDTLADIC 656


>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 758

 Score =  426 bits (1095), Expect(4) = 0.0
 Identities = 221/324 (68%), Positives = 255/324 (78%), Gaps = 22/324 (6%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTD---------------------VFAKLLPN 1086
            ++VQAMRE R DLCKILR+AN+E+L   + D                     VF KLLPN
Sbjct: 317  RIVQAMREQRNDLCKILRDANLEDLNQAEEDEEEEEEEENRKDLSQNEKDDIVFEKLLPN 376

Query: 1087 SVNSRDNEPPELSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVT 1266
            S+    +E   L +V+  NSR+YTTLMKGYM AGRV+D VRMLEAMRH  D  SHPDHVT
Sbjct: 377  SIKP-SSEARLLPKVYAPNSRIYTTLMKGYMKAGRVSDTVRMLEAMRHQGDKASHPDHVT 435

Query: 1267 YTTVISAFVKQGLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MI 1446
            YTTV+SAFVK GLMDRAREVLAEM RIGVP N +TYN+L+KGY QQL ID+A++L++ M 
Sbjct: 436  YTTVVSAFVKAGLMDRAREVLAEMTRIGVPANWITYNILLKGYCQQLQIDKAKELLREMA 495

Query: 1447 DTG-IEPDVVSYNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQA 1623
            D   I+PDVVSYN +IDGCIL+DDSAGAL++FNEMR RGIAPTK+SYT+LMKAFA SGQ 
Sbjct: 496  DDAEIKPDVVSYNILIDGCILIDDSAGALAFFNEMRERGIAPTKISYTTLMKAFALSGQP 555

Query: 1624 KLANKVFDKMLKDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGS 1803
            KLANKVFD+ML+DPRVKVDLVAWNMLV+ YS+LG VEEAK +I+RMK  GFYPNV TYGS
Sbjct: 556  KLANKVFDEMLRDPRVKVDLVAWNMLVEGYSRLGLVEEAKKIIQRMKEKGFYPNVATYGS 615

Query: 1804 LANAIDLARKPGEALLLWNEIKHR 1875
            LAN I LARKPGEALLLW EIK R
Sbjct: 616  LANGISLARKPGEALLLWKEIKER 639



 Score =  217 bits (553), Expect(4) = 0.0
 Identities = 108/156 (69%), Positives = 133/156 (85%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           ASS+IKSML+SGYLPHVKAWS+V+SRL++   + P E++ LF +VT+RV RF D  +V  
Sbjct: 165 ASSLIKSMLRSGYLPHVKAWSAVVSRLST---ESPSESINLFDSVTRRVRRFADPTIVAD 221

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           S+PDTAAYNAVLNACA++GDK++FL+LF+EM E+ CEPDVLTY+VMIKL ARADRKDLLV
Sbjct: 222 SKPDTAAYNAVLNACANLGDKSKFLKLFEEMSEWGCEPDVLTYNVMIKLLARADRKDLLV 281

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+I+EK   LCM+T  SLVAAYVGF DL TAE+
Sbjct: 282 FVLERIVEKRIRLCMTTLHSLVAAYVGFDDLETAER 317



 Score = 95.5 bits (236), Expect(4) = 0.0
 Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 9/88 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  ICVRAAFFKKALEIVACME++GIPPNKT Y  +  +    ++         Q   I 
Sbjct: 669  LADICVRAAFFKKALEIVACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRIE 728

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSV 2189
            R  AA+AFKFWLGLPNSYYGSEW  + +
Sbjct: 729  RKRAAEAFKFWLGLPNSYYGSEWHFEPI 756



 Score = 36.2 bits (82), Expect(4) = 0.0
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +2

Query: 1907 SSGIPPLEHDEGLLDTLADMC 1969
            SS  PPL+ DEGLLDTLAD+C
Sbjct: 653  SSSPPPLKPDEGLLDTLADIC 673


>gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlisea aurea]
          Length = 675

 Score =  412 bits (1059), Expect(4) = 0.0
 Identities = 213/307 (69%), Positives = 248/307 (80%), Gaps = 5/307 (1%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTD---VFAKLLPNSVNSRDNE-PPELSQVFE 1137
            K+VQAMREGR DLCK+LR++++ +    + D   VF KLLPN+  + + E PP+L + F 
Sbjct: 247  KLVQAMREGRTDLCKLLRDSSISDAEDEEQDHSHVFKKLLPNATTANEIEDPPQLPRPFS 306

Query: 1138 LNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMDRA 1317
             +SR+YTTLMKGYM AGRV D VRML AMR+  D  SHPDHV YTTVISAFVK   MD+A
Sbjct: 307  PDSRIYTTLMKGYMKAGRVADTVRMLTAMRYEEDESSHPDHVAYTTVISAFVKARSMDKA 366

Query: 1318 REVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MID-TGIEPDVVSYNTIID 1494
            R+VLAEM +  VP N VTYN+L+KGY QQL +D+AE LI+ MI+  GIEPD VSYNT+ID
Sbjct: 367  RQVLAEMAKRDVPANLVTYNILLKGYCQQLQMDKAEDLIREMINRAGIEPDAVSYNTLID 426

Query: 1495 GCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDPRVK 1674
            GCIL DDSAGAL+YFNEMR RGIAPTKVSYT+LMKAFASSGQ KLANKVFD+MLKDPRVK
Sbjct: 427  GCILSDDSAGALAYFNEMRTRGIAPTKVSYTTLMKAFASSGQPKLANKVFDEMLKDPRVK 486

Query: 1675 VDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEALLL 1854
             DL+AWNMLV+ Y KLG VEEAK+VI+ MK  G +PNV TYGSLAN I +ARKPGEALLL
Sbjct: 487  PDLIAWNMLVEGYCKLGMVEEAKTVIQAMKDYGVHPNVATYGSLANGISVARKPGEALLL 546

Query: 1855 WNEIKHR 1875
            WNEIK R
Sbjct: 547  WNEIKER 553



 Score =  228 bits (582), Expect(4) = 0.0
 Identities = 110/156 (70%), Positives = 132/156 (84%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A SI+KSMLK+GYLPHVKAWS+V S LASSGDDGP++A+KLF +VT+RV  F+D ++VK 
Sbjct: 92  AVSIVKSMLKAGYLPHVKAWSAVASHLASSGDDGPVQAIKLFNSVTRRVRMFSDGEIVKD 151

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           S+PDT AYNA LNACA +GD N+FL+LFDEM EF+CEPD LTY+VMIKLCAR  RKDLLV
Sbjct: 152 SKPDTGAYNAALNACAVLGDSNKFLKLFDEMPEFDCEPDALTYNVMIKLCARVGRKDLLV 211

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+I++  T  C++T  SLVAAYVGF DL TAEK
Sbjct: 212 FVLERIIQTQTDFCITTLHSLVAAYVGFNDLETAEK 247



 Score = 84.3 bits (207), Expect(4) = 0.0
 Identities = 44/83 (53%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVYQ*ACIT--------- 2105
            L  ICVRAAFF+KALEIVACME+HGIPPNK  Y  +  +    ++     +         
Sbjct: 586  LADICVRAAFFRKALEIVACMEEHGIPPNKIKYKRIYVEMHSRMFTSKHASRARVDRRKE 645

Query: 2106 R*TAADAFKFWLGLPNSYYGSEW 2174
            R  AA+AFKFWLGLPN YY S+W
Sbjct: 646  RKRAAEAFKFWLGLPNEYYSSDW 668



 Score = 40.0 bits (92), Expect(4) = 0.0
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +2

Query: 1886 NGDESNPSSGIPPLEHDEGLLDTLADMC 1969
            +   S+ SS +PPL+ DEGLLDTLAD+C
Sbjct: 563  SSSSSSSSSSLPPLKPDEGLLDTLADIC 590


>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  464 bits (1194), Expect(2) = 0.0
 Identities = 247/384 (64%), Positives = 287/384 (74%), Gaps = 2/384 (0%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTDVFAKLLPNSVNSRDNEPPELSQVFELNSR 1149
            K+VQAMREGR+DLCKILR+ N E   +N+  +F KLLPNSV   ++EPP L + +  +SR
Sbjct: 323  KLVQAMREGRQDLCKILRDVNSENPGNNEGYIFDKLLPNSVERNNSEPPLLPKAYAPDSR 382

Query: 1150 MYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMDRAREVL 1329
            +YTTLMKGYM  GRVTD VRMLEAMRH  DS S PDHVTYTTV+SA VK G MDRAR+VL
Sbjct: 383  IYTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVL 442

Query: 1330 AEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MIDT-GIEPDVVSYNTIIDGCIL 1506
            AEM RIGVP NRVTYN+L+KGY +QL ID+A++L++ M+D  GI PDVVSYNT+IDGCIL
Sbjct: 443  AEMTRIGVPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCIL 502

Query: 1507 VDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDPRVKVDLV 1686
            VDDSAGAL+YFNEMRARGIAPTK+SYT+LMKAFA SGQ KLANKVFD+ML+DPRVKVDLV
Sbjct: 503  VDDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLV 562

Query: 1687 AWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEALLLWNEI 1866
            AWNMLV+ + +LG VEEAK  ++RM+ NGFYPNV TYGSLAN I LARKPGEALLLWNE+
Sbjct: 563  AWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGIALARKPGEALLLWNEV 622

Query: 1867 KHRWDGKWRRVESFFGYPTIGT**RTIRYFGRYVSGQXXXXXXXXXXXXXXNMGYHQIK- 2043
            K R   K     S    P +      +                          G    K 
Sbjct: 623  KERCVVKEEGEISKSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKS 682

Query: 2044 QFTRIYVEMHSRMFTSKHASHARQ 2115
            ++TRIYVEMHSRMFTSKHAS ARQ
Sbjct: 683  KYTRIYVEMHSRMFTSKHASKARQ 706



 Score =  246 bits (629), Expect(2) = 0.0
 Identities = 119/156 (76%), Positives = 139/156 (89%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A+S+IKSML+SGYLPHVKAWS+V+SRLA+SGDDGP+EALKLF +VT+R+HRFTD  LV  
Sbjct: 168 AASLIKSMLRSGYLPHVKAWSAVVSRLAASGDDGPLEALKLFDSVTRRIHRFTDATLVAD 227

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           SRPDTAAYNAVLNACA++GD  RFL++F+EM +   EPDVLTY+VMIKLCAR DRKDLLV
Sbjct: 228 SRPDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLV 287

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+IL+KG  LCM+T  SLVAAYVGFGDL TAEK
Sbjct: 288 FVLERILDKGIQLCMTTLHSLVAAYVGFGDLETAEK 323



 Score = 99.4 bits (246), Expect = 7e-18
 Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  ICVRAAFF+KALEIVACME++GIPPNK+ Y  +  +    ++         Q     
Sbjct: 652  LADICVRAAFFRKALEIVACMEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDRRSE 711

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSVIEDEYRSE 2213
            R  AA+AFKFWLGLPNSYYGSEWRL+ +  D+Y S+
Sbjct: 712  RKRAAEAFKFWLGLPNSYYGSEWRLEPIDGDDYASD 747


>ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citrus clementina]
            gi|568853953|ref|XP_006480600.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Citrus sinensis]
            gi|557530935|gb|ESR42118.1| hypothetical protein
            CICLE_v10011148mg [Citrus clementina]
          Length = 740

 Score =  447 bits (1151), Expect(2) = 0.0
 Identities = 242/389 (62%), Positives = 285/389 (73%), Gaps = 8/389 (2%)
 Frame = +1

Query: 973  VVQAMREGRKDLCKILREANMEELCS-----NDTDVFAKLLPNSVNSRDNEPPELSQVFE 1137
            +VQAMREGR+DLCKI+RE ++E+  S     +D +VF KLLPNS+N   +EPP L + F 
Sbjct: 309  IVQAMREGRRDLCKIIRELDLEDYSSENEGDDDDEVFEKLLPNSINP-SSEPPLLPKTFA 367

Query: 1138 LNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMDRA 1317
             NSR+YTTLMKGYMN GRV+D VRML AMR   D  SHPDHVTYTTV+SA VK G MDRA
Sbjct: 368  PNSRIYTTLMKGYMNEGRVSDTVRMLGAMRRQEDDASHPDHVTYTTVVSALVKAGSMDRA 427

Query: 1318 REVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MIDTG-IEPDVVSYNTIID 1494
            R+VLAEM RIGVP NR+TYN+L+KGY QQL ID+A++L++ M D   IEPDVVSYN +ID
Sbjct: 428  RQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKELLREMADDAKIEPDVVSYNILID 487

Query: 1495 GCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDPRVK 1674
            G IL+DDSAGAL++FNEMRARGIAPTK+SYT+LMKAFA S Q KLANKVFD+ML+DPRVK
Sbjct: 488  GFILIDDSAGALTFFNEMRARGIAPTKISYTTLMKAFALSSQPKLANKVFDEMLRDPRVK 547

Query: 1675 VDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEALLL 1854
            VD+VAWNMLV+ Y ++G VEEAK +IERMK NGFYPNV TYGSLAN I LARKPGEALLL
Sbjct: 548  VDIVAWNMLVEGYCRMGLVEEAKRIIERMKENGFYPNVATYGSLANGISLARKPGEALLL 607

Query: 1855 WNEIKHRWDGKWRRVESFFGY-PTIGT**RTIRYFGRYVSGQXXXXXXXXXXXXXXNMGY 2031
            W EIK R + K   V +     P +      +                          G 
Sbjct: 608  WKEIKERCEVKKEGVNADSDLPPPLKPDEELLDALADICVRAAFFRKALEIVACMEEHGI 667

Query: 2032 HQIK-QFTRIYVEMHSRMFTSKHASHARQ 2115
               K ++ +IYVEMHSRMFTSKHAS ARQ
Sbjct: 668  PPNKTKYKKIYVEMHSRMFTSKHASQARQ 696



 Score =  234 bits (596), Expect(2) = 0.0
 Identities = 113/155 (72%), Positives = 136/155 (87%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A+S+IKSML+SGYLPHVKAWS+V+SRLA+SGDDGP+E++KLF  V KRV +F+D D+V  
Sbjct: 153 ATSVIKSMLRSGYLPHVKAWSTVVSRLAASGDDGPVESVKLFEVVVKRVRKFSDPDIVSD 212

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           S+PDTAAYNAVLNACA++G   +FL+LFD+M EF  +PDVLTY+VMIKLCARA RK LLV
Sbjct: 213 SKPDTAAYNAVLNACANLGKPKKFLQLFDQMHEFGAKPDVLTYNVMIKLCARARRKHLLV 272

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAE 970
           F+LE+ILE G PLCM+TFQSLVAAYVGFGDL  AE
Sbjct: 273 FLLERILEMGIPLCMTTFQSLVAAYVGFGDLEIAE 307



 Score =  103 bits (257), Expect = 4e-19
 Identities = 55/93 (59%), Positives = 63/93 (67%), Gaps = 9/93 (9%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  ICVRAAFF+KALEIVACME+HGIPPNKT Y  +  +    ++         Q     
Sbjct: 642  LADICVRAAFFRKALEIVACMEEHGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRRE 701

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSVIEDEY 2204
            R  AA+AFKFWLGLPNSYYGSEWRLD +  DEY
Sbjct: 702  RKRAAEAFKFWLGLPNSYYGSEWRLDPMDGDEY 734


>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  424 bits (1090), Expect(2) = 0.0
 Identities = 232/383 (60%), Positives = 270/383 (70%), Gaps = 1/383 (0%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTDVFAKLLPNSVNSRDNEPPELSQVFELNSR 1149
            K+VQAMREGR+DLCKILR+ N E                            +  +  +SR
Sbjct: 331  KLVQAMREGRQDLCKILRDVNSE----------------------------NPAYAPDSR 362

Query: 1150 MYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMDRAREVL 1329
            +YTTLMKGYM  GRVTD VRMLEAMRH  DS S PDHVTYTTV+SA VK G MDRAR+VL
Sbjct: 363  IYTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVL 422

Query: 1330 AEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MIDT-GIEPDVVSYNTIIDGCIL 1506
            AEM RIGVP NRVTYN+L+KGY +QL ID+A++L++ M+D  GI PDVVSYNT+IDGCIL
Sbjct: 423  AEMTRIGVPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCIL 482

Query: 1507 VDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDPRVKVDLV 1686
            VDDSAGAL+YFNEMRARGIAPTK+SYT+LMKAFA SGQ KLANKVFD+ML+DPRVKVDLV
Sbjct: 483  VDDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLV 542

Query: 1687 AWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEALLLWNEI 1866
            AWNMLV+ + +LG VEEAK  ++RM+ NGFYPNV TYGSLAN I LARKPGEALLLWNE+
Sbjct: 543  AWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGIALARKPGEALLLWNEV 602

Query: 1867 KHRWDGKWRRVESFFGYPTIGT**RTIRYFGRYVSGQXXXXXXXXXXXXXXNMGYHQIKQ 2046
            K R   +           T+        +F + +                 N       +
Sbjct: 603  KERCPDEGL-------LDTLADICVRAAFFRKALE---------IVACMEENGIPPNKSK 646

Query: 2047 FTRIYVEMHSRMFTSKHASHARQ 2115
            +TRIYVEMHSRMFTSKHAS ARQ
Sbjct: 647  YTRIYVEMHSRMFTSKHASKARQ 669



 Score =  246 bits (629), Expect(2) = 0.0
 Identities = 119/156 (76%), Positives = 139/156 (89%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A+S+IKSML+SGYLPHVKAWS+V+SRLA+SGDDGP+EALKLF +VT+R+HRFTD  LV  
Sbjct: 176 AASLIKSMLRSGYLPHVKAWSAVVSRLAASGDDGPLEALKLFDSVTRRIHRFTDATLVAD 235

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           SRPDTAAYNAVLNACA++GD  RFL++F+EM +   EPDVLTY+VMIKLCAR DRKDLLV
Sbjct: 236 SRPDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLV 295

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+IL+KG  LCM+T  SLVAAYVGFGDL TAEK
Sbjct: 296 FVLERILDKGIQLCMTTLHSLVAAYVGFGDLETAEK 331



 Score = 99.4 bits (246), Expect = 7e-18
 Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  ICVRAAFF+KALEIVACME++GIPPNK+ Y  +  +    ++         Q     
Sbjct: 615  LADICVRAAFFRKALEIVACMEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDRRSE 674

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSVIEDEYRSE 2213
            R  AA+AFKFWLGLPNSYYGSEWRL+ +  D+Y S+
Sbjct: 675  RKRAAEAFKFWLGLPNSYYGSEWRLEPIDGDDYASD 710



 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 21/266 (7%)
 Frame = +1

Query: 1141 NSRMYTTLMKGYMNA-GRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMDRA 1317
            +SR  T      +NA   + D  R L+    +    + PD +TY  +I    +    D  
Sbjct: 235  DSRPDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLL 294

Query: 1318 REVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MID---------------- 1449
              VL  ++  G+ +   T + L+  Y     ++ AEKL++ M +                
Sbjct: 295  VFVLERILDKGIQLCMTTLHSLVAAYVGFGDLETAEKLVQAMREGRQDLCKILRDVNSEN 354

Query: 1450 TGIEPDVVSYNTIIDGCI---LVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQ 1620
                PD   Y T++ G +    V D+   L            P  V+YT+++ A   +G 
Sbjct: 355  PAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGS 414

Query: 1621 AKLANKVFDKMLKDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVI-ERMKGNGFYPNVVTY 1797
               A +V  +M +   V  + V +N+L+  Y +  ++++AK ++ E +   G  P+VV+Y
Sbjct: 415  MDRARQVLAEMTR-IGVPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSY 473

Query: 1798 GSLANAIDLARKPGEALLLWNEIKHR 1875
             +L +   L      AL  +NE++ R
Sbjct: 474  NTLIDGCILVDDSAGALAYFNEMRAR 499


>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
            gi|557108800|gb|ESQ49107.1| hypothetical protein
            EUTSA_v10020113mg [Eutrema salsugineum]
          Length = 777

 Score =  434 bits (1117), Expect(2) = e-179
 Identities = 242/419 (57%), Positives = 285/419 (68%), Gaps = 38/419 (9%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDT------------------------------ 1059
            ++VQAMRE R+DLCK+LRE N+E+L   +                               
Sbjct: 326  RIVQAMREKRRDLCKVLRECNIEDLKEKEEEEAEDDEDAFEDGEDSGYSPRDEVNEEVFE 385

Query: 1060 DVFAKLLPNSVNSRDNEPPELSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLAD 1239
            DVF KLLPNSV   D +PP L +VF  +SR+YTTLMKGYM  GRV D  RMLEAMR   D
Sbjct: 386  DVFKKLLPNSVTPSD-KPPLLPRVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDD 444

Query: 1240 SESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDR 1419
            S+SHPD VTYTTV+SAFVK GLMDRAR+VL EM R+GVP NR+TYNVL+KGY +QL ID+
Sbjct: 445  SKSHPDEVTYTTVVSAFVKAGLMDRARQVLGEMARMGVPANRITYNVLLKGYCKQLQIDK 504

Query: 1420 AEKLIK*MI-DTGIEPDVVSYNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLM 1596
            AE L++ M  D GIEPDVVSYN IIDGCIL+DDSAGALS+FNEMR +GIAPTK+SYT+LM
Sbjct: 505  AEDLLREMAEDAGIEPDVVSYNIIIDGCILIDDSAGALSFFNEMRTKGIAPTKISYTTLM 564

Query: 1597 KAFASSGQAKLANKVFDKMLKDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGF 1776
            KAFA SGQ KLAN+VFD+M++DPRVKVDL+AWNMLV+ Y +LG +E+AK V+ RMK NGF
Sbjct: 565  KAFAMSGQPKLANRVFDEMMRDPRVKVDLIAWNMLVEGYCRLGLIEDAKRVVSRMKENGF 624

Query: 1777 YPNVVTYGSLANAIDLARKPGEALLLWNEIKHRWDGKWRRVESFFGYPTIGT**RTIRYF 1956
            YPNV TYGSLAN + LARKPGEALLLW EIK R + K R  E   G+ T  +        
Sbjct: 625  YPNVATYGSLANGVSLARKPGEALLLWKEIKERCEVKKR--EESEGHSTDPSPSMLKPDE 682

Query: 1957 GRY-------VSGQXXXXXXXXXXXXXXNMGYHQIKQFTRIYVEMHSRMFTSKHASHAR 2112
            G         V                 N       ++ +IYVEMHSRMFTSKHAS AR
Sbjct: 683  GLLDMLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQAR 741



 Score =  224 bits (571), Expect(2) = e-179
 Identities = 105/156 (67%), Positives = 134/156 (85%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S+IKSM++SGYLPHVKAW++ ++ L+S+GDDGP E++KLF A+T+RV RF D  LV  
Sbjct: 171 AVSVIKSMIRSGYLPHVKAWTAAVANLSSAGDDGPEESIKLFTAITRRVRRFADQSLVAQ 230

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           SRPDTAA+NAVLNACA++GD  +F +LFDEM E++CE DVLTY+VMIKLCAR +RK+L+V
Sbjct: 231 SRPDTAAFNAVLNACANLGDAEKFSKLFDEMSEWDCESDVLTYNVMIKLCARVNRKELIV 290

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+I+EKG  +CM+T  SLVAAYVGFGDL TAE+
Sbjct: 291 FVLERIVEKGIKVCMTTMHSLVAAYVGFGDLRTAER 326



 Score = 94.0 bits (232), Expect = 3e-16
 Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 9/86 (10%)
 Frame = +3

Query: 1950 ILWQICVRAAFFKKALEIVACMEQHGIPPNKT----VY*DLCRDAFKDVYQ*AC-----I 2102
            +L  ICVRAAFFKKALEI+ACME++GIPPNKT    +Y ++    F   +         +
Sbjct: 687  MLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARVERRV 746

Query: 2103 TR*TAADAFKFWLGLPNSYYGSEWRL 2180
             R  AA+AFKFWLGLPNSYYGSEW+L
Sbjct: 747  ERKRAAEAFKFWLGLPNSYYGSEWKL 772


>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Cucumis sativus]
            gi|449483612|ref|XP_004156638.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Cucumis sativus]
          Length = 736

 Score =  431 bits (1108), Expect(2) = e-178
 Identities = 227/390 (58%), Positives = 281/390 (72%), Gaps = 8/390 (2%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREA------NMEELCSNDTDVFAKLLPNSVNSRDNEPPELSQV 1131
            KVVQAMREG++D+C+ILR+       ++E+L  ++ ++F KLLPN     D+EPP L ++
Sbjct: 310  KVVQAMREGKRDICRILRDGYLDEIEDVEDLNEDEDELFKKLLPNLNEEIDSEPPLLPKI 369

Query: 1132 FELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMD 1311
            +  NSR+YTTLMKGYMN GRV D +RMLEAMR+  D  SHPDHV+YTTV+SA VK G MD
Sbjct: 370  YSPNSRIYTTLMKGYMNEGRVGDTIRMLEAMRNQGDRSSHPDHVSYTTVVSALVKAGSMD 429

Query: 1312 RAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MID-TGIEPDVVSYNTI 1488
            RAR+VLAEM RIG P NR+TYN+L+KGY + L +D+A+ L K M+D  GIEPDVVSYN +
Sbjct: 430  RARQVLAEMTRIGCPANRITYNILLKGYCRLLQMDKAKDLFKEMVDGAGIEPDVVSYNIM 489

Query: 1489 IDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDPR 1668
            IDG ILVDDSAGAL +FNEMR++GIAPTKVSYT+LMKAFA SGQ KLA KVFD+ML DPR
Sbjct: 490  IDGSILVDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPR 549

Query: 1669 VKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEAL 1848
            VKVD+VAWNML++ Y +LG +EEAK ++++MK NGF+P+V TYGSLAN I LARKPGEAL
Sbjct: 550  VKVDIVAWNMLIEGYCRLGWIEEAKQLVQKMKENGFFPDVSTYGSLANGISLARKPGEAL 609

Query: 1849 LLWNEIKHRWDGKWRRVESFFGYPTIGT**RTIRYFGRYVSGQXXXXXXXXXXXXXXNMG 2028
            LLWNE+K R   +          P +      +                          G
Sbjct: 610  LLWNEVKERCAVRRGYKSDSSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENG 669

Query: 2029 YHQIK-QFTRIYVEMHSRMFTSKHASHARQ 2115
                K +++RIYVEMHSRMFTSKHAS ARQ
Sbjct: 670  IPPNKTKYSRIYVEMHSRMFTSKHASKARQ 699



 Score =  223 bits (569), Expect(2) = e-178
 Identities = 109/156 (69%), Positives = 130/156 (83%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S+IKSML+SGYLPHVKAWS+V+SRLA+S DDGP EA+KLF  VT+R+ RF D  +   
Sbjct: 155 ACSVIKSMLRSGYLPHVKAWSAVVSRLAASPDDGPAEAIKLFSLVTQRLRRFADPTITAD 214

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           SRPDTAAYN VLNACA++G   +FL+LF+EM EF  EPDVLTY+VMIKLCARA+RKDL+V
Sbjct: 215 SRPDTAAYNGVLNACANMGAYEKFLQLFEEMEEFGAEPDVLTYNVMIKLCARANRKDLIV 274

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           +VLE IL K  P+CM+T  S+VAAYVGFGDL TAEK
Sbjct: 275 YVLEAILAKDIPMCMTTLHSVVAAYVGFGDLETAEK 310



 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 48/83 (57%), Positives = 57/83 (68%), Gaps = 9/83 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  ICVRAAFF+KALEIVACME++GIPPNKT Y  +  +    ++         Q   I 
Sbjct: 645  LADICVRAAFFRKALEIVACMEENGIPPNKTKYSRIYVEMHSRMFTSKHASKARQDRRIE 704

Query: 2106 R*TAADAFKFWLGLPNSYYGSEW 2174
            +  AA+AFKFWLGLPNSYYGSEW
Sbjct: 705  KKRAAEAFKFWLGLPNSYYGSEW 727


>ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi|297328472|gb|EFH58891.1|
            HCF152 [Arabidopsis lyrata subsp. lyrata]
          Length = 772

 Score =  430 bits (1106), Expect(2) = e-178
 Identities = 238/418 (56%), Positives = 280/418 (66%), Gaps = 37/418 (8%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDT------------------------------ 1059
            ++VQAMRE R+DLCK+LRE N E+L   +                               
Sbjct: 320  RIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAAEDDEDAFEDDEDSGYSARDEVSEEGF 379

Query: 1060 -DVFAKLLPNSVNSRDNEPPELSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLA 1236
             DVF KLLPNSV+    +PP L +VF  +SR+YTTLMKGYM  GRV D  RMLEAMR   
Sbjct: 380  EDVFKKLLPNSVDP-SGDPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQD 438

Query: 1237 DSESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHID 1416
            D  SHPD VTYTTV+SAFVK GLMDRAR+VLAEM R+GVP NR+TYNVL+KGY +QL ID
Sbjct: 439  DRNSHPDEVTYTTVVSAFVKAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQID 498

Query: 1417 RAEKLIK*MI-DTGIEPDVVSYNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSL 1593
            RAE L++ M  D GIEPDVVSYN IIDGCIL+DDSAGAL++FNEMR RGIAPTK+SYT+L
Sbjct: 499  RAEDLLREMAEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTL 558

Query: 1594 MKAFASSGQAKLANKVFDKMLKDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNG 1773
            MKAFA SGQ KLAN+VFD+M+ DPRVKVDL+AWNMLV+ Y +LG +E+A+ V+ RMK NG
Sbjct: 559  MKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 618

Query: 1774 FYPNVVTYGSLANAIDLARKPGEALLLWNEIKHRWDGKWRRVESFFGY----PTIGT**R 1941
            FYPNV TYGSLAN + LARKPGEALLLW EIK R + K +   S        P +     
Sbjct: 619  FYPNVATYGSLANGVSLARKPGEALLLWKEIKERCEVKKKEAPSDSSSDPSPPMLKPDEG 678

Query: 1942 TIRYFGRYVSGQXXXXXXXXXXXXXXNMGYHQIK-QFTRIYVEMHSRMFTSKHASHAR 2112
             +                          G    K ++ +IYVEMHSRMFTSKHAS AR
Sbjct: 679  LLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQAR 736



 Score =  223 bits (569), Expect(2) = e-178
 Identities = 103/156 (66%), Positives = 135/156 (86%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S+IKSM++SGYLPHVKAW++ ++ L+++GDDGP E++KLF A+T+RV RF D  LV  
Sbjct: 165 AVSVIKSMIRSGYLPHVKAWTAAVASLSAAGDDGPEESIKLFTAITRRVKRFGDQSLVAQ 224

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           SRPDTAA+NAVLNACA++GD  ++ +LFDEM E++CEPDVLTY+VMIKLCAR DRK+L+V
Sbjct: 225 SRPDTAAFNAVLNACANLGDTEKYWKLFDEMSEWDCEPDVLTYNVMIKLCARVDRKELIV 284

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           +VLE+I++KG  +CM+T  SLVAAYVGFGDL TAE+
Sbjct: 285 YVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER 320



 Score = 93.6 bits (231), Expect = 4e-16
 Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 9/85 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKT----VY*DLCRDAFKDVYQ*AC-----IT 2105
            L  ICVRAAFFKKALEI+ACME++GIPPNKT    +Y ++    F   +         + 
Sbjct: 683  LADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVE 742

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRL 2180
            R  AA+AFKFWLGLPNSYYGSEW+L
Sbjct: 743  RKRAAEAFKFWLGLPNSYYGSEWKL 767


>ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Capsella rubella]
            gi|482565467|gb|EOA29656.1| hypothetical protein
            CARUB_v10015405mg [Capsella rubella]
          Length = 781

 Score =  429 bits (1104), Expect(2) = e-177
 Identities = 237/418 (56%), Positives = 281/418 (67%), Gaps = 37/418 (8%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDT------------------------------ 1059
            ++VQAMRE R+DLCK+LRE N E+L   +                               
Sbjct: 329  RIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGFSAGDGVSSEEGF 388

Query: 1060 -DVFAKLLPNSVNSRDNEPPELSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLA 1236
             DVF KLLPNSV+   ++PP L +VF  +SR+YTTLMKGYM +GRV D  RMLEAMR   
Sbjct: 389  EDVFKKLLPNSVDP-SSDPPLLPKVFVPDSRIYTTLMKGYMKSGRVADTARMLEAMRRQD 447

Query: 1237 DSESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHID 1416
            D  SHPD VTYTTV+SAFVK GLMDRAR+VLAEM R+GVP NR+TYNVL+KGY +QL ID
Sbjct: 448  DRNSHPDEVTYTTVVSAFVKAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQID 507

Query: 1417 RAEKLIK*MI-DTGIEPDVVSYNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSL 1593
            RAE L++ M  D G+EPDVVSYN IIDGCIL+DDSAGAL++FNEMR RGIAPTK+SYT+L
Sbjct: 508  RAEDLLREMAEDAGVEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTL 567

Query: 1594 MKAFASSGQAKLANKVFDKMLKDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNG 1773
            MKAFA SGQ KLAN+VFD+M+ DPRVKVDL+AWNMLV+ Y +LG +E+A+ V+ RMK NG
Sbjct: 568  MKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 627

Query: 1774 FYPNVVTYGSLANAIDLARKPGEALLLWNEIKHRWDGKWRRV----ESFFGYPTIGT**R 1941
            FYPNV TYGSLAN + LARKPGEALLLW EIK R + K         S    P +     
Sbjct: 628  FYPNVSTYGSLANGVSLARKPGEALLLWKEIKERCEVKKNEALSDSSSNSSPPMLKPDEG 687

Query: 1942 TIRYFGRYVSGQXXXXXXXXXXXXXXNMGYHQIK-QFTRIYVEMHSRMFTSKHASHAR 2112
             +                          G    K ++ +IYVEMHSRMFTSKHAS AR
Sbjct: 688  LLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQAR 745



 Score =  222 bits (565), Expect(2) = e-177
 Identities = 104/156 (66%), Positives = 134/156 (85%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S+IKSML+SGYLPHVKAW++ ++ L+++GDDGP E++KLF A+T+RV RF D  LV  
Sbjct: 174 AVSVIKSMLRSGYLPHVKAWTAAVASLSAAGDDGPEESIKLFTAITRRVKRFGDQSLVAQ 233

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           SRPDTAA+NAVLNACA++GD  ++ +LF EM E++CEPDVLTY+VMIKLCAR DRK+L+V
Sbjct: 234 SRPDTAAFNAVLNACANLGDTEKYWKLFYEMAEWDCEPDVLTYNVMIKLCARVDRKELIV 293

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+I++KG  +CM+T  SLVAAYVGFGDL TAE+
Sbjct: 294 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER 329



 Score = 93.6 bits (231), Expect = 4e-16
 Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 9/85 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKT----VY*DLCRDAFKDVYQ*AC-----IT 2105
            L  ICVRAAFFKKALEI+ACME++GIPPNKT    +Y ++    F   +         + 
Sbjct: 692  LADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVE 751

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRL 2180
            R  AA+AFKFWLGLPNSYYGSEW+L
Sbjct: 752  RKRAAEAFKFWLGLPNSYYGSEWKL 776


>ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thaliana]
            gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g09650, chloroplastic; AltName: Full=Protein HIGH
            CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
            gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein
            [Arabidopsis thaliana] gi|332641272|gb|AEE74793.1| RNA
            binding protein HCF152 [Arabidopsis thaliana]
          Length = 778

 Score =  425 bits (1093), Expect(2) = e-175
 Identities = 236/417 (56%), Positives = 277/417 (66%), Gaps = 36/417 (8%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSND------------------------------T 1059
            ++VQAMRE R+DLCK+LRE N E+L   +                               
Sbjct: 327  RIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVV 386

Query: 1060 DVFAKLLPNSVNSRDNEPPELSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLAD 1239
            DVF KLLPNSV+    EPP L +VF  +SR+YTTLMKGYM  GRV D  RMLEAMR   D
Sbjct: 387  DVFKKLLPNSVDP-SGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDD 445

Query: 1240 SESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDR 1419
              SHPD VTYTTV+SAFV  GLMDRAR+VLAEM R+GVP NR+TYNVL+KGY +QL IDR
Sbjct: 446  RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDR 505

Query: 1420 AEKLIK*MI-DTGIEPDVVSYNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLM 1596
            AE L++ M  D GIEPDVVSYN IIDGCIL+DDSAGAL++FNEMR RGIAPTK+SYT+LM
Sbjct: 506  AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565

Query: 1597 KAFASSGQAKLANKVFDKMLKDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGF 1776
            KAFA SGQ KLAN+VFD+M+ DPRVKVDL+AWNMLV+ Y +LG +E+A+ V+ RMK NGF
Sbjct: 566  KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625

Query: 1777 YPNVVTYGSLANAIDLARKPGEALLLWNEIKHRWDGKWRRVESFFGY----PTIGT**RT 1944
            YPNV TYGSLAN +  ARKPG+ALLLW EIK R   K +   S        P +      
Sbjct: 626  YPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGL 685

Query: 1945 IRYFGRYVSGQXXXXXXXXXXXXXXNMGYHQIK-QFTRIYVEMHSRMFTSKHASHAR 2112
            +                          G    K ++ +IYVEMHSRMFTSKHAS AR
Sbjct: 686  LDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQAR 742



 Score =  221 bits (562), Expect(2) = e-175
 Identities = 103/156 (66%), Positives = 135/156 (86%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S+IKSM++SGYLPHVKAW++ ++ L++SGDDGP E++KLF A+T+RV RF D  LV  
Sbjct: 172 AVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSLVGQ 231

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           SRPDTAA+NAVLNACA++GD +++ +LF+EM E++CEPDVLTY+VMIKLCAR  RK+L+V
Sbjct: 232 SRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIV 291

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+I++KG  +CM+T  SLVAAYVGFGDL TAE+
Sbjct: 292 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER 327



 Score = 93.6 bits (231), Expect = 4e-16
 Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 9/85 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKT----VY*DLCRDAFKDVYQ*AC-----IT 2105
            L  ICVRAAFFKKALEI+ACME++GIPPNKT    +Y ++    F   +         + 
Sbjct: 689  LADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVE 748

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRL 2180
            R  AA+AFKFWLGLPNSYYGSEW+L
Sbjct: 749  RKRAAEAFKFWLGLPNSYYGSEWKL 773


>dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
          Length = 778

 Score =  425 bits (1093), Expect(2) = e-174
 Identities = 236/417 (56%), Positives = 277/417 (66%), Gaps = 36/417 (8%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSND------------------------------T 1059
            ++VQAMRE R+DLCK+LRE N E+L   +                               
Sbjct: 327  RIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVV 386

Query: 1060 DVFAKLLPNSVNSRDNEPPELSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLAD 1239
            DVF KLLPNSV+    EPP L +VF  +SR+YTTLMKGYM  GRV D  RMLEAMR   D
Sbjct: 387  DVFKKLLPNSVDP-SGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDD 445

Query: 1240 SESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDR 1419
              SHPD VTYTTV+SAFV  GLMDRAR+VLAEM R+GVP NR+TYNVL+KGY +QL IDR
Sbjct: 446  RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDR 505

Query: 1420 AEKLIK*MI-DTGIEPDVVSYNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLM 1596
            AE L++ M  D GIEPDVVSYN IIDGCIL+DDSAGAL++FNEMR RGIAPTK+SYT+LM
Sbjct: 506  AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565

Query: 1597 KAFASSGQAKLANKVFDKMLKDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGF 1776
            KAFA SGQ KLAN+VFD+M+ DPRVKVDL+AWNMLV+ Y +LG +E+A+ V+ RMK NGF
Sbjct: 566  KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625

Query: 1777 YPNVVTYGSLANAIDLARKPGEALLLWNEIKHRWDGKWRRVESFFGY----PTIGT**RT 1944
            YPNV TYGSLAN +  ARKPG+ALLLW EIK R   K +   S        P +      
Sbjct: 626  YPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGL 685

Query: 1945 IRYFGRYVSGQXXXXXXXXXXXXXXNMGYHQIK-QFTRIYVEMHSRMFTSKHASHAR 2112
            +                          G    K ++ +IYVEMHSRMFTSKHAS AR
Sbjct: 686  LDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQAR 742



 Score =  215 bits (548), Expect(2) = e-174
 Identities = 101/156 (64%), Positives = 134/156 (85%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S+IKSM++SG LPHVKAW++ ++ L++SGD+GP E++KLF A+T+RV RF D  LV  
Sbjct: 172 AVSVIKSMIRSGCLPHVKAWTAAVASLSASGDNGPEESIKLFIAITRRVKRFGDQSLVGQ 231

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           SRPDTAA+NAVLNACA++GD +++ +LF+EM E++CEPDVLTY+VMIKLCAR  RK+L+V
Sbjct: 232 SRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIV 291

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+I++KG  +CM+T  SLVAAYVGFGDL TAE+
Sbjct: 292 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER 327



 Score = 93.6 bits (231), Expect = 4e-16
 Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 9/85 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKT----VY*DLCRDAFKDVYQ*AC-----IT 2105
            L  ICVRAAFFKKALEI+ACME++GIPPNKT    +Y ++    F   +         + 
Sbjct: 689  LADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVE 748

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRL 2180
            R  AA+AFKFWLGLPNSYYGSEW+L
Sbjct: 749  RKRAAEAFKFWLGLPNSYYGSEWKL 773


>ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 732

 Score =  431 bits (1107), Expect(2) = e-171
 Identities = 237/397 (59%), Positives = 286/397 (72%), Gaps = 15/397 (3%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTD----VFAKLLPNSV------NSRDNEPPE 1119
            K+VQAMRE R+DLC+I+RE+N      N  D    VF KLLPN +      ++  N+PP 
Sbjct: 295  KIVQAMREKRRDLCRIMRESNSYYSVENYYDDVDPVFHKLLPNLMMDKSGNDANGNDPPL 354

Query: 1120 LSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQ 1299
            L + +  N+R+YTTLMKGYM AGRV+D VRMLEAMR   DS SHPDHV+YTTV+SA VK 
Sbjct: 355  LPKAYTPNTRIYTTLMKGYMKAGRVSDTVRMLEAMRCQDDSASHPDHVSYTTVVSALVKA 414

Query: 1300 GLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MI-DTGIEPDVVS 1476
            G MDRAR+VLAEM RIGVP NR+TYN+L+KGY +QL +D+A +L+K M  D GI+PDVVS
Sbjct: 415  GFMDRARQVLAEMTRIGVPANRITYNILLKGYCRQLQMDKARELLKDMTEDIGIQPDVVS 474

Query: 1477 YNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKML 1656
            YN +IDGCILVDDSAGALS+FNEMR RGIAPTK+SYT+LMKAFA SGQ KLA +VFD+M+
Sbjct: 475  YNILIDGCILVDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFALSGQPKLAQRVFDEMM 534

Query: 1657 KDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKP 1836
             DPRV+VDL+AWNMLV+ YS+LG VEEAK VI++MK NGF+P+V TYGSLAN I LARKP
Sbjct: 535  NDPRVRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDVSTYGSLANGIALARKP 594

Query: 1837 GEALLLWNEIKHRWD-GK--WRRVESFFGYPTIGT**RTIRYFGRYVSGQXXXXXXXXXX 2007
            GEAL+LWNE+K R + GK   +   S    P +      +                    
Sbjct: 595  GEALILWNEVKERCEVGKEGGKSDSSSVVPPPLKPDEGLLDTLADICVRAAFFRKALEIA 654

Query: 2008 XXXXNMGYHQIK-QFTRIYVEMHSRMFTSKHASHARQ 2115
                  G    K ++TRIYVEMHSRMFTSKHAS ARQ
Sbjct: 655  ACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQ 691



 Score =  200 bits (509), Expect(2) = e-171
 Identities = 97/157 (61%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDD-GPMEALKLFGAVTKRVHRFTDLDLVK 682
           ASS++KSML+SGYLPHVKAWS+V+SRLAS  D  GP+EA++LF AVT+R+ +  +LD+  
Sbjct: 139 ASSVVKSMLRSGYLPHVKAWSAVVSRLASDDDSSGPIEAIRLFHAVTRRLRKLPELDMAA 198

Query: 683 HSRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLL 862
            SRPDT A+NA LNACA++G+   FL++FDEM +F   PD L+Y++++KLC   DRKDLL
Sbjct: 199 ESRPDTVAFNAALNACANLGNGKMFLQVFDEMPQFGVVPDSLSYNIVMKLCVGNDRKDLL 258

Query: 863 VFVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           VFVLE+IL+   PLCM+T  SLVAAYV F DL TAEK
Sbjct: 259 VFVLERILQLNIPLCMTTLHSLVAAYVDFNDLETAEK 295



 Score = 94.7 bits (234), Expect = 2e-16
 Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 9/86 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  ICVRAAFF+KALEI ACME++GIPPNKT Y  +  +    ++         Q   + 
Sbjct: 637  LADICVRAAFFRKALEIAACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQDRRVE 696

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLD 2183
            R  AA+AFKFWLGLPNSYYGSEWRL+
Sbjct: 697  RKRAAEAFKFWLGLPNSYYGSEWRLE 722


>ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 732

 Score =  431 bits (1107), Expect(2) = e-171
 Identities = 237/397 (59%), Positives = 286/397 (72%), Gaps = 15/397 (3%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTD----VFAKLLPNSV------NSRDNEPPE 1119
            K+VQAMRE R+DLC+I+RE+N      N  D    VF KLLPN +      ++  N+PP 
Sbjct: 295  KIVQAMREKRRDLCRIMRESNSYYSVENYYDDVDPVFHKLLPNLMMDKSGNDANGNDPPL 354

Query: 1120 LSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQ 1299
            L + +  N+R+YTTLMKGYM AGRV+D VRMLEAMR   DS SHPDHV+YTTV+SA VK 
Sbjct: 355  LPKAYTPNTRIYTTLMKGYMKAGRVSDTVRMLEAMRCQDDSASHPDHVSYTTVVSALVKA 414

Query: 1300 GLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MI-DTGIEPDVVS 1476
            G MDRAR+VLAEM RIGVP NR+TYN+L+KGY +QL +D+A +L+K M  D GI+PDVVS
Sbjct: 415  GFMDRARQVLAEMTRIGVPANRITYNILLKGYCRQLQMDKARELLKDMTEDIGIQPDVVS 474

Query: 1477 YNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKML 1656
            YN +IDGCILVDDSAGALS+FNEMR RGIAPTK+SYT+LMKAFA SGQ KLA +VFD+M+
Sbjct: 475  YNILIDGCILVDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFALSGQPKLAQRVFDEMM 534

Query: 1657 KDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKP 1836
             DPRV+VDL+AWNMLV+ YS+LG VEEAK VI++MK NGF+P+V TYGSLAN I LARKP
Sbjct: 535  NDPRVRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDVSTYGSLANGIALARKP 594

Query: 1837 GEALLLWNEIKHRWD-GK--WRRVESFFGYPTIGT**RTIRYFGRYVSGQXXXXXXXXXX 2007
            GEAL+LWNE+K R + GK   +   S    P +      +                    
Sbjct: 595  GEALILWNEVKERCEVGKEGGKSDSSSVVPPPLKPDEGLLDTLADICVRAAFFRKALEIA 654

Query: 2008 XXXXNMGYHQIK-QFTRIYVEMHSRMFTSKHASHARQ 2115
                  G    K ++TRIYVEMHSRMFTSKHAS ARQ
Sbjct: 655  ACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQ 691



 Score =  200 bits (509), Expect(2) = e-171
 Identities = 97/157 (61%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDD-GPMEALKLFGAVTKRVHRFTDLDLVK 682
           ASS++KSML+SGYLPHVKAWS+V+SRLAS  D  GP+EA++LF AVT+R+ +  +LD+  
Sbjct: 139 ASSVVKSMLRSGYLPHVKAWSAVVSRLASDDDSSGPIEAIRLFHAVTRRLRKLPELDMAA 198

Query: 683 HSRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLL 862
            SRPDT A+NA LNACA++G+   FL++FDEM +F   PD L+Y++++KLC   DRKDLL
Sbjct: 199 ESRPDTVAFNAALNACANLGNGKMFLQVFDEMPQFGVVPDSLSYNIVMKLCVGNDRKDLL 258

Query: 863 VFVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           VFVLE+IL+   PLCM+T  SLVAAYV F DL TAEK
Sbjct: 259 VFVLERILQLNIPLCMTTLHSLVAAYVDFNDLETAEK 295



 Score = 94.7 bits (234), Expect = 2e-16
 Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 9/86 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  ICVRAAFF+KALEI ACME++GIPPNKT Y  +  +    ++         Q   + 
Sbjct: 637  LADICVRAAFFRKALEIAACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQDRRVE 696

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLD 2183
            R  AA+AFKFWLGLPNSYYGSEWRL+
Sbjct: 697  RKRAAEAFKFWLGLPNSYYGSEWRLE 722


>gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus vulgaris]
          Length = 713

 Score =  430 bits (1106), Expect(2) = e-170
 Identities = 237/402 (58%), Positives = 286/402 (71%), Gaps = 20/402 (4%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILRE-ANMEELCSNDTD---------------VFAKLLPNSVNSR 1101
            K+VQAMRE R+D+C +LRE +N+E    N++D               VF KLLPN V+  
Sbjct: 268  KLVQAMREQRRDICWVLRECSNLEYSSGNESDYDSNNDSNNDEDENCVFEKLLPNLVDQS 327

Query: 1102 DNE--PPELSQVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTT 1275
             NE  PP L + +  N+R YTTLMKGYMNAGRV D VRMLEAMRH  D  SHPDHV+YTT
Sbjct: 328  GNEAEPPLLPKGYAPNTRTYTTLMKGYMNAGRVNDTVRMLEAMRHQDDKGSHPDHVSYTT 387

Query: 1276 VISAFVKQGLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MID-T 1452
            V+SA VK G MDRAREVLAEM RIGVP N +TYN+L+KGY +QL I++A++L+K M+D  
Sbjct: 388  VVSALVKVGSMDRAREVLAEMTRIGVPANLITYNILLKGYCKQLQINKAKELLKEMVDDA 447

Query: 1453 GIEPDVVSYNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLA 1632
            GI+ DVVSYN +IDGCILVDDSAGALS+FNEMRARGIAPTK+SYT+LMKAFA SGQ KLA
Sbjct: 448  GIQSDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLA 507

Query: 1633 NKVFDKMLKDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLAN 1812
            +KVF++M  DPRVKVDL+AWNMLV+ Y KLG VEEAK V+++MK +G +P+  TYGSLAN
Sbjct: 508  HKVFNEMDNDPRVKVDLIAWNMLVEGYCKLGLVEEAKKVVQKMKDSGLHPDASTYGSLAN 567

Query: 1813 AIDLARKPGEALLLWNEIKHRWDGKWRRVESFFGYPTIGT**RTIRYFGRYVSGQXXXXX 1992
             I LARKPGEALLLWNE+K R++ + +  +S    P +      +               
Sbjct: 568  GIALARKPGEALLLWNEVKERFEMRKKGEKSDSSVPPLKPDGGLLDTLADICVRAAFFRK 627

Query: 1993 XXXXXXXXXNMGYHQIK-QFTRIYVEMHSRMFTSKHASHARQ 2115
                       G    K +FTRIYVEMHSRMFTSKHAS ARQ
Sbjct: 628  TLEIVACMEENGIAPNKTKFTRIYVEMHSRMFTSKHASRARQ 669



 Score =  199 bits (506), Expect(2) = e-170
 Identities = 91/156 (58%), Positives = 127/156 (81%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A+S+++SM++SGYLPHVKAW++V++RL+S+ DDGP+EA+KLF +VT+R+ +  + D+   
Sbjct: 113 AASVLRSMIRSGYLPHVKAWTAVVARLSSAPDDGPVEAIKLFRSVTRRLRKLPEKDMAVA 172

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
           S PDT A NAVLNACA++GD   FL++FDEM +F+  PD L+Y+ MIKLC +  RKDLL+
Sbjct: 173 SHPDTTAINAVLNACANLGDAKAFLQVFDEMPQFDVAPDALSYNTMIKLCCKIGRKDLLL 232

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
           FVLE+IL+ G P C++T Q+LV+AYV FGDL TAEK
Sbjct: 233 FVLERILQLGIPFCVTTLQALVSAYVEFGDLETAEK 268



 Score = 85.1 bits (209), Expect = 1e-13
 Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 10/87 (11%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKT----VY*DLCRDAFKDVY-----Q*ACIT 2105
            L  ICVRAAFF+K LEIVACME++GI PNKT    +Y ++    F   +     Q     
Sbjct: 615  LADICVRAAFFRKTLEIVACMEENGIAPNKTKFTRIYVEMHSRMFTSKHASRARQDRRTE 674

Query: 2106 R*TAADAFKFWLGLPNSYY-GSEWRLD 2183
            R  AA+AFKFWLGLPNSYY GSEWRL+
Sbjct: 675  RKRAAEAFKFWLGLPNSYYDGSEWRLE 701



 Score = 67.4 bits (163), Expect = 3e-08
 Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 32/284 (11%)
 Frame = +1

Query: 1051 NDTDVFAKLLPNSVNSRDNEPPELSQVFELNSRMYTTLMKGYMNA-GRVTDMVRMLEAMR 1227
            +D  V A  L  SV  R  + PE      + S   TT +   +NA   + D    L+   
Sbjct: 144  DDGPVEAIKLFRSVTRRLRKLPEKDMA--VASHPDTTAINAVLNACANLGDAKAFLQVFD 201

Query: 1228 HLADSESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQL 1407
             +   +  PD ++Y T+I    K G  D    VL  ++++G+P    T   L+  Y +  
Sbjct: 202  EMPQFDVAPDALSYNTMIKLCCKIGRKDLLLFVLERILQLGIPFCVTTLQALVSAYVEFG 261

Query: 1408 HIDRAEKLIK*M------------------IDTGIEPDVVSYNTI----IDGCI------ 1503
             ++ AEKL++ M                    +G E D  S N       + C+      
Sbjct: 262  DLETAEKLVQAMREQRRDICWVLRECSNLEYSSGNESDYDSNNDSNNDEDENCVFEKLLP 321

Query: 1504 -LVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKM--LKDPRVK 1674
             LVD S         +  +G AP   +YT+LMK + ++G+     ++ + M    D    
Sbjct: 322  NLVDQSGNEAE--PPLLPKGYAPNTRTYTTLMKGYMNAGRVNDTVRMLEAMRHQDDKGSH 379

Query: 1675 VDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSL 1806
             D V++  +V    K+G ++ A+ V+  M   G   N++TY  L
Sbjct: 380  PDHVSYTTVVSALVKVGSMDRAREVLAEMTRIGVPANLITYNIL 423


>ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
            gi|241928165|gb|EES01310.1| hypothetical protein
            SORBIDRAFT_03g031900 [Sorghum bicolor]
          Length = 731

 Score =  341 bits (875), Expect(3) = e-147
 Identities = 184/313 (58%), Positives = 230/313 (73%), Gaps = 11/313 (3%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTDVF---AKLLPNSVNSRD-----NEPPELS 1125
            ++VQAMRE RKD+C +LR   M+  C   TDV    A LL + V   +     +E P L 
Sbjct: 314  RIVQAMREERKDICLLLRAVAMD--CDGATDVVEEGAALLDDIVAGSEQELGADEVPLLP 371

Query: 1126 QVFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSE--SHPDHVTYTTVISAFVKQ 1299
            + +  N+R+YTTLMKGYMNAGRV D+V +L AMR  A +   S PDHVTYTTV+SA V  
Sbjct: 372  KAYPPNARVYTTLMKGYMNAGRVDDVVAVLRAMRQEARTAPASRPDHVTYTTVMSALVGA 431

Query: 1300 GLMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MI-DTGIEPDVVS 1476
            G + RA  VL EM   GVP NRVTYNVL+KGY QQL I +A +L + M+ D GI+P VV+
Sbjct: 432  GDVARAHAVLDEMAADGVPANRVTYNVLLKGYCQQLQIGKARELFEEMVTDAGIQPGVVT 491

Query: 1477 YNTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKML 1656
            YNT++DGC+L DDSAGAL++FNEMR+RGIAP+ VSYT+LMKAFA SGQ K+A+KVF++M 
Sbjct: 492  YNTLMDGCVLSDDSAGALAFFNEMRSRGIAPSTVSYTTLMKAFAVSGQPKVAHKVFEEME 551

Query: 1657 KDPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKP 1836
            +DPRV VD  AWNMLV+ Y +LG+VE AK V+ERMK  G  P+V TYGSLA  + +ARKP
Sbjct: 552  RDPRVTVDRAAWNMLVEGYCRLGQVETAKQVVERMKERGVQPDVATYGSLAKGVAMARKP 611

Query: 1837 GEALLLWNEIKHR 1875
            GEAL+LWNE+K R
Sbjct: 612  GEALVLWNEVKER 624



 Score =  139 bits (351), Expect(3) = e-147
 Identities = 73/156 (46%), Positives = 103/156 (66%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S++  ML+ G LP  +A+++ ++RL       P +AL+LF AV + + R     +   
Sbjct: 164 AHSLLLYMLRQGLLPDRRAYTAAVARLTP-----PTKALRLFDAVLRHLRRSPPELVSPS 218

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
             PD AA+N+ L+ACAD GD  RF +LFD M E++   D LTY+V+IK+CARA RKDL+ 
Sbjct: 219 CLPDAAAFNSALSACADAGDCRRFRQLFDAMSEWSAAADALTYNVVIKMCARAGRKDLVA 278

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
            VLE++L  G   C +TF SLVAA+VGFGD+ TAE+
Sbjct: 279 RVLERMLSSGLAPCATTFHSLVAAFVGFGDIATAER 314



 Score = 93.6 bits (231), Expect(3) = e-147
 Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 9/92 (9%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  +CVRAAFFKKALEIVACME+ GI PNKT Y  +  +    ++         Q     
Sbjct: 637  LADVCVRAAFFKKALEIVACMEEKGIAPNKTKYKKMYIEMHSRMFTSKHASQARQDRRRE 696

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSVIEDE 2201
            R  AA+AFKFWLGLPNSYYGSEWR++ V++ +
Sbjct: 697  RKRAAEAFKFWLGLPNSYYGSEWRIEPVLDGD 728


>tpg|DAA58005.1| TPA: hypothetical protein ZEAMMB73_979671 [Zea mays]
          Length = 730

 Score =  339 bits (869), Expect(3) = e-146
 Identities = 184/312 (58%), Positives = 228/312 (73%), Gaps = 10/312 (3%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTDVF--AKLLPNSV-----NSRDNEPPELSQ 1128
            ++VQAMRE RKD+C +LR  +M+  C   TDV   A LL + V         +E P L +
Sbjct: 314  RIVQAMREERKDICLLLRAVSMD--CDGVTDVEEGAVLLDDIVAGAKQGQGSDEVPLLPK 371

Query: 1129 VFELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSE--SHPDHVTYTTVISAFVKQG 1302
             +  N+R+YTTLMKGY NAGRV D++ +L AMR  A +   S PDHVTYTTVISA V  G
Sbjct: 372  AYPPNARVYTTLMKGYTNAGRVDDVLAVLRAMRQEAQTAPASRPDHVTYTTVISALVGAG 431

Query: 1303 LMDRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MI-DTGIEPDVVSY 1479
             M RAR VL EM    VP NRVTYNVL+KGY QQL I +A +L + M+ D GI+P VV+Y
Sbjct: 432  DMARARAVLNEMAAARVPANRVTYNVLLKGYCQQLQIGQARELFEEMVTDAGIQPGVVTY 491

Query: 1480 NTIIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLK 1659
            NT++DGC+L DDSAGAL++FNEMR+RGIAP+ VSYT+LMKAFA SGQ K+A+KVF++M +
Sbjct: 492  NTLMDGCVLTDDSAGALAFFNEMRSRGIAPSTVSYTTLMKAFAVSGQPKVAHKVFEEMER 551

Query: 1660 DPRVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPG 1839
            DPRV VD  AWNMLV+ Y +LG VE AK V+ERMK  G  P+V TYGS+A  I +ARKPG
Sbjct: 552  DPRVTVDRAAWNMLVEGYCRLGLVETAKQVVERMKERGVQPDVATYGSMAKGIAVARKPG 611

Query: 1840 EALLLWNEIKHR 1875
            EAL+LWNE+K R
Sbjct: 612  EALVLWNEVKER 623



 Score =  139 bits (351), Expect(3) = e-146
 Identities = 78/157 (49%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S++  ML+ G LP  +A+++ +SRL       P +AL+LF AV + + R    +LV  
Sbjct: 164 AHSLLLYMLRQGLLPDRRAYTAAVSRLTP-----PTKALRLFDAVLRNL-RSAPPELVSP 217

Query: 686 S-RPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLL 862
           S  PD AA+NA L+ACAD GD  RF +LFD M E++   D LTY+V+IK+CARA RKDL+
Sbjct: 218 SCLPDAAAFNAALSACADAGDCRRFRQLFDAMSEWSAAADALTYNVVIKMCARAGRKDLV 277

Query: 863 VFVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
             VLE++L  G   C +TF SLVAA+VGFGD+ TAE+
Sbjct: 278 ARVLERMLFSGLTPCATTFHSLVAAFVGFGDIATAER 314



 Score = 90.9 bits (224), Expect(3) = e-146
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 9/92 (9%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  +CVRAAFFKKALEIVACME+ GI PNKT Y  +  +    ++         Q     
Sbjct: 636  LADVCVRAAFFKKALEIVACMEEKGIAPNKTKYKKMYIEMHSRMFTSKHASQARQDRRRE 695

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSVIEDE 2201
            R  AA+AFKFWLGLPNSYYGSEW+++ +++ +
Sbjct: 696  RKRAAEAFKFWLGLPNSYYGSEWQIEPLLDGD 727


>ref|XP_004969633.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Setaria italica]
          Length = 734

 Score =  331 bits (849), Expect(3) = e-144
 Identities = 177/310 (57%), Positives = 222/310 (71%), Gaps = 8/310 (2%)
 Frame = +1

Query: 970  KVVQAMREGRKDLCKILREANMEELCSNDTDVFAKLLPNSVNSRD-----NEPPELSQVF 1134
            ++VQAMR  RKD+C +LR   ME     D +  A LL + V         +E P L + +
Sbjct: 317  RIVQAMRGQRKDICLLLRAVAMECDDVPDAEQGAALLDDIVAGAKPEHGTDEVPLLPKAY 376

Query: 1135 ELNSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSE--SHPDHVTYTTVISAFVKQGLM 1308
              N+R+YTTLMKGYMNAGRV D+V ML AMR  A++   S PDHVTYTTV+SA    G M
Sbjct: 377  PPNARVYTTLMKGYMNAGRVEDVVTMLRAMRREAETAPASRPDHVTYTTVVSALAAAGDM 436

Query: 1309 DRAREVLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MID-TGIEPDVVSYNT 1485
             RA  VL EM   GVP NRVTYN+L+KGY QQL I +A++L + M+   GI+P VV+YN 
Sbjct: 437  ARAHAVLDEMAAAGVPANRVTYNILLKGYCQQLQISKAKELFEEMVTGAGIQPGVVTYNI 496

Query: 1486 IIDGCILVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDP 1665
            ++DGC+L DDSAGAL++FNEMR+RGIAP+ VSYT+LMKAFA SGQ K+A+KVF++M +D 
Sbjct: 497  LMDGCVLTDDSAGALAFFNEMRSRGIAPSTVSYTTLMKAFAMSGQPKMAHKVFEEMERDS 556

Query: 1666 RVKVDLVAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEA 1845
            RV VD  AWNMLV+ Y +LG VE AK V+ERMK  G  P+V TYGSLA  +  ARKPGEA
Sbjct: 557  RVTVDRAAWNMLVEGYCRLGLVETAKQVVERMKERGVQPDVATYGSLAKGVAAARKPGEA 616

Query: 1846 LLLWNEIKHR 1875
            L+LWNE++ R
Sbjct: 617  LVLWNEVQER 626



 Score =  138 bits (347), Expect(3) = e-144
 Identities = 72/156 (46%), Positives = 103/156 (66%)
 Frame = +2

Query: 506 ASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLVKH 685
           A S++  +L+ G+LP  +A+++ ++RL       P +AL+LF  V + + R     +   
Sbjct: 167 AHSLLLYLLRQGFLPDRRAYTAAVARLTP-----PTKALRLFDTVLRHLRRSPPELVSPS 221

Query: 686 SRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDLLV 865
             PDTAA+NA L+ACAD GD  RF +LFD M E++   D LTY+V+IK+CARA RK L+ 
Sbjct: 222 CLPDTAAFNAALSACADAGDCRRFRQLFDAMSEWSAAADALTYNVVIKMCARAGRKGLVA 281

Query: 866 FVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAEK 973
            VLE++L  G   C +TF SLVAA+VGFGD+ TAE+
Sbjct: 282 NVLERMLSSGIAPCATTFHSLVAAFVGFGDIPTAER 317



 Score = 92.8 bits (229), Expect(3) = e-144
 Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 9/92 (9%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKTVY*DLCRDAFKDVY---------Q*ACIT 2105
            L  +CVRAAFFKKALEIVACME+ GI PNKT Y  +  +    ++         Q     
Sbjct: 639  LADVCVRAAFFKKALEIVACMEEKGIAPNKTRYRKMYIEMHSRMFTSKHASQARQDRRRE 698

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLDSVIEDE 2201
            R  AA+AFKFWLGLPNSYYGSEWR++ ++E +
Sbjct: 699  RKRAAEAFKFWLGLPNSYYGSEWRVEPLLEGD 730


>ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [Amborella trichopoda]
            gi|548845504|gb|ERN04895.1| hypothetical protein
            AMTR_s00080p00039920 [Amborella trichopoda]
          Length = 718

 Score =  358 bits (920), Expect(2) = e-135
 Identities = 202/386 (52%), Positives = 263/386 (68%), Gaps = 5/386 (1%)
 Frame = +1

Query: 973  VVQAMREGRKDLCKILREANMEELCSNDTDVFAKLLPNSVN-SRDNE--PPELSQVFELN 1143
            +V+AM EGR+D+C +LRE +         ++ + +    ++ S D+   P  L + +  +
Sbjct: 298  LVRAMSEGRQDVCALLRERSPRTTAMEFDEISSMIESLGLDISHDSSSAPLLLPKSYHPD 357

Query: 1144 SRMYTTLMKGYMNAGRVTDMVRMLEAMRHLADSESHPDHVTYTTVISAFVKQGLMDRARE 1323
            SR+YTTLMKGYM+ GR+ D++ +LE M    DS S PD VTYTTV++A V++GLMDRAR 
Sbjct: 358  SRIYTTLMKGYMHQGRLNDVMDLLETMEKQRDS-SQPDEVTYTTVVTALVREGLMDRARA 416

Query: 1324 VLAEMVRIGVPVNRVTYNVLIKGYFQQLHIDRAEKLIK*MIDTGIEPDVVSYNTIIDGCI 1503
            +L+EM    VP NRVTYNVL+KGY + + + +AE L+  M + GIE DVVSYN +IDGCI
Sbjct: 417  MLSEMASRKVPANRVTYNVLLKGYCRLVQMKKAEALVGDMKEAGIELDVVSYNILIDGCI 476

Query: 1504 LVDDSAGALSYFNEMRARGIAPTKVSYTSLMKAFASSGQAKLANKVFDKMLKDPRVKVDL 1683
            ++DDSA ALSYFNEMR++GIAP+K+SYT+LMKAFASSG+ KLA+KVFD+MLKDPRV+VD+
Sbjct: 477  VIDDSAKALSYFNEMRSKGIAPSKISYTTLMKAFASSGKPKLASKVFDEMLKDPRVEVDM 536

Query: 1684 VAWNMLVDTYSKLGKVEEAKSVIERMKGNGFYPNVVTYGSLANAIDLARKPGEALLLWNE 1863
            VAWNML+D Y +LG  EEAKS++ R+K NG  P++ TYGSLANAI +ARKPGEALLLWNE
Sbjct: 537  VAWNMLLDAYCRLGLFEEAKSIVLRIKENGMVPDLATYGSLANAIAIARKPGEALLLWNE 596

Query: 1864 IKHRW-DGKWRRVESFFGYPTIGT**RTIRYFGRYVSGQXXXXXXXXXXXXXXNMGYHQI 2040
            IK R  DG         G P +      +                          G    
Sbjct: 597  IKERCKDGGGE------GPPPLKPDEGLLNTLADICVRSAFFKKALEIVVCMEENGIAPN 650

Query: 2041 K-QFTRIYVEMHSRMFTSKHASHARQ 2115
            K +F RIYVEMHSRMFTS+HAS AR+
Sbjct: 651  KTKFKRIYVEMHSRMFTSQHASKARR 676



 Score =  151 bits (382), Expect(2) = e-135
 Identities = 83/157 (52%), Positives = 107/157 (68%)
 Frame = +2

Query: 500 TNASSIIKSMLKSGYLPHVKAWSSVISRLASSGDDGPMEALKLFGAVTKRVHRFTDLDLV 679
           T A SII SML  G+LPHVKAWS+V+SRL++     P +ALKLF ++ + +    +  L+
Sbjct: 145 TPALSIIYSMLSIGHLPHVKAWSAVLSRLST-----PRDALKLFHSILEHLSLSPEPALL 199

Query: 680 KHSRPDTAAYNAVLNACADIGDKNRFLELFDEMGEFNCEPDVLTYSVMIKLCARADRKDL 859
             S PD AA+NAVLNACA+ GD   F+E+F  M +F   PD LTY++MIK  AR +RK+L
Sbjct: 200 SLSYPDVAAFNAVLNACANAGDAVNFVEIFSRMPKFELIPDALTYNIMIKFFARIERKEL 259

Query: 860 LVFVLEKILEKGTPLCMSTFQSLVAAYVGFGDLVTAE 970
           LV VLEK+L      C ++F SLVAAYVG GDL  AE
Sbjct: 260 LVAVLEKMLAMKVAPCATSFHSLVAAYVGLGDLEMAE 296



 Score = 88.2 bits (217), Expect = 2e-14
 Identities = 48/86 (55%), Positives = 57/86 (66%), Gaps = 9/86 (10%)
 Frame = +3

Query: 1953 LWQICVRAAFFKKALEIVACMEQHGIPPNKT----VY*DLCRDAFKDVYQ*AC-----IT 2105
            L  ICVR+AFFKKALEIV CME++GI PNKT    +Y ++    F   +           
Sbjct: 622  LADICVRSAFFKKALEIVVCMEENGIAPNKTKFKRIYVEMHSRMFTSQHASKARRDRRSD 681

Query: 2106 R*TAADAFKFWLGLPNSYYGSEWRLD 2183
            R  AA+AFKFWLGLPNSYYGSEWRL+
Sbjct: 682  RKRAAEAFKFWLGLPNSYYGSEWRLE 707