BLASTX nr result
ID: Atropa21_contig00010474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00010474
(1384 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 129 4e-41
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 119 4e-39
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 127 1e-38
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 132 5e-33
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 129 3e-31
ref|XP_002331075.1| predicted protein [Populus trichocarpa] 131 5e-30
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 127 6e-29
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 112 8e-25
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 114 1e-23
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 102 1e-22
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 106 2e-22
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 107 5e-22
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 107 8e-22
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 102 1e-21
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 95 1e-21
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A... 103 3e-21
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 98 1e-20
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 105 1e-20
ref|XP_006358739.1| PREDICTED: kinesin-like protein cut7-like [S... 107 1e-20
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 103 1e-20
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 129 bits (323), Expect(3) = 4e-41
Identities = 57/149 (38%), Positives = 91/149 (61%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L+DK+T+R + W L YA R+QLV ++L + +YW IF PK ++K + T C+ FLW
Sbjct: 777 LIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLW 836
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
TG V+T+ A +AWD +PK G+ V + + WN+AA+ K +W + K D LWV+WVN
Sbjct: 837 TGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNA 896
Query: 556 IYLRGVDRWQYQIPTNSCWY*KRICGLRQ 642
Y++ + + +N+ W ++I R+
Sbjct: 897 YYIKRQNIENVTVSSNTSWILRKIFESRE 925
Score = 55.1 bits (131), Expect(3) = 4e-41
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 735 VEWQYWRAICK-LTVPKHSFISWLAMHQRLLTRDRLGKMGLCQDETCLLCGDKNETVEHL 911
V W+ R IC PK FI WLAM RL T +R+ + C +CG++ ET++HL
Sbjct: 958 VVWK--RLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHL 1015
Query: 912 FFQYVYSQ 935
FF +YS+
Sbjct: 1016 FFNCIYSK 1023
Score = 33.5 bits (75), Expect(3) = 4e-41
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSKINCE 193
G L FRYLGVP++SKKL+ C+
Sbjct: 753 GSLPFRYLGVPLASKKLNFSQCK 775
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 119 bits (297), Expect(4) = 4e-39
Identities = 55/148 (37%), Positives = 86/148 (58%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
LV+ +T+R ++W K L YA R+QL+ S+L + +YW+ IF K V++ + +C+ FLW
Sbjct: 774 LVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLW 833
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
TG+ TK A +AW RPK G VI+ +WN AA+ K +W + K D LWV+W++
Sbjct: 834 TGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHS 893
Query: 556 IYLRGVDRWQYQIPTNSCWY*KRICGLR 639
Y++ D I + W ++I R
Sbjct: 894 YYIKRQDILTVNISNQTTWILRKIVKAR 921
Score = 55.5 bits (132), Expect(4) = 4e-39
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +3
Query: 726 GVGVEWQYWRAICK-LTVPKHSFISWLAMHQRLLTRDRLGKMGLCQDETCLLCGDKNETV 902
G V W+ R IC PK FI W+ +H+RL T DR+ + G+ D LC + ET+
Sbjct: 952 GERVRWR--RLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRNDGETI 1009
Query: 903 EHLFFQYVYSQACXXXXXXXXXXXXXNVDSTGVWSRI---ARRSKGR 1034
+HLFF YS V + S + AR+ KG+
Sbjct: 1010 QHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEIISSVCGQARKKKGK 1056
Score = 34.7 bits (78), Expect(4) = 4e-39
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSKINCE 193
G+L FRYLGVP++SKKL+ C+
Sbjct: 750 GELPFRYLGVPLTSKKLTYAQCK 772
Score = 21.6 bits (44), Expect(4) = 4e-39
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +3
Query: 18 SLSSGLTTNASKSNIFSANMNSQVLEDICE 107
S +SGL + KSNI+ ++ + ++ +
Sbjct: 714 SHASGLAASHEKSNIYFCGVDDETARELAD 743
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 127 bits (320), Expect(3) = 1e-38
Identities = 56/149 (37%), Positives = 84/149 (56%)
Frame = +1
Query: 193 MLVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFL 372
+L+DK+ R+ W L YA RVQL+ SV+ ++W PK V+ I IC+ FL
Sbjct: 601 VLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFL 660
Query: 373 WTGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVN 552
W G N ++ + IAW+ C PK G+ +I+ WN+ ++ K +WNV NKSDNLW+KW++
Sbjct: 661 WIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLH 720
Query: 553 HIYLRGVDRWQYQIPTNSCWY*KRICGLR 639
Y+RG W + + W + LR
Sbjct: 721 TYYIRGQSIWSMVLKKSHSWIMSSMMKLR 749
Score = 47.4 bits (111), Expect(3) = 1e-38
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 7/143 (4%)
Frame = +3
Query: 750 WRAIC--KLTVPKHSFISWLAMHQRLLTRDRLGKMGLCQDETCLLCGDKNETVEHLFFQY 923
WR + L P+ F W A H RL ++DRL K GL D C C E+ EHLFF
Sbjct: 781 WRTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANCAFCSSM-ESHEHLFFGC 839
Query: 924 VYSQACXXXXXXXXXXXXXNVDSTGVWSR----IARRSKGRKSRG-FLRAIVAAVINHVL 1088
+ + + WS I R+ KG+ R L+ I H+
Sbjct: 840 IELKTIWTAVLNWLQI----IHMPSTWSEELNWITRKCKGKGWRAMLLKCAFTETIYHIW 895
Query: 1089 VARNEALWEHRVLHPRVICKRIQ 1157
RN HRV V ++++
Sbjct: 896 AYRN-----HRVFGGNVNNRKVE 913
Score = 33.9 bits (76), Expect(3) = 1e-38
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +2
Query: 122 KGKLSFRYLGVPISSKKLS 178
+GK+ FRYLG+P+SSKKL+
Sbjct: 577 EGKMPFRYLGIPLSSKKLN 595
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 132 bits (331), Expect(3) = 5e-33
Identities = 55/130 (42%), Positives = 84/130 (64%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L++K+ +R+ SW K L YA R QLV +VL + + W+ +F+ P ++K I +C+ +LW
Sbjct: 582 LIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLW 641
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+G TK ALIAWD C PK G+G+I+ WN +AV K W++ANK D LW+KW++
Sbjct: 642 SGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHA 701
Query: 556 IYLRGVDRWQ 585
Y++G W+
Sbjct: 702 YYIKGQREWK 711
Score = 30.8 bits (68), Expect(3) = 5e-33
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2
Query: 128 KLSFRYLGVPISSKKLSKI 184
+L F+YLGVP+SSKKL+ I
Sbjct: 559 ELPFKYLGVPLSSKKLNTI 577
Score = 27.3 bits (59), Expect(3) = 5e-33
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 18 SLSSGLTTNASKSNIFSANMNSQVLEDICELTGY 119
S +SGL N +KS+I+ + +V + I + GY
Sbjct: 522 SQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGY 555
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 129 bits (325), Expect(2) = 3e-31
Identities = 56/149 (37%), Positives = 91/149 (61%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L+DK+ ++K W + L YA R+QLVNSV+ + +YW + F FPK+V++ I IC+IFLW
Sbjct: 160 LIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLW 219
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
TG ++ + +AW C P+ G+ +ID WN+A + K +WN+++K D+LWVKW+
Sbjct: 220 TGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQA 279
Query: 556 IYLRGVDRWQYQIPTNSCWY*KRICGLRQ 642
Y++ + ++ W K I R+
Sbjct: 280 YYVKRSELMHIEMKNTDSWIMKAILKQRE 308
Score = 34.3 bits (77), Expect(2) = 3e-31
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +2
Query: 122 KGKLSFRYLGVPISSKKLSKIN 187
+G+L F+YLGVP++SKKLS I+
Sbjct: 135 EGQLPFKYLGVPVTSKKLSTIH 156
>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 131 bits (329), Expect(2) = 5e-30
Identities = 65/149 (43%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
LVD++TS+V+ W + L YA RVQL+NSVL I YW+S+FL P V+K + I K FLW
Sbjct: 76 LVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLW 135
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSD-NLWVKWVN 552
+G T A +AWD C PK+ G+G+ WN+ A+ K+IWN+ N SD ++W W+
Sbjct: 136 SGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIR 195
Query: 553 HIYLRGVDRWQYQIPTNSCWY*KRICGLR 639
LRG + W + P N W +I LR
Sbjct: 196 SNLLRGRNFWTIKTPQNCSWAWGKILKLR 224
Score = 28.5 bits (62), Expect(2) = 5e-30
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 122 KGKLSFRYLGVPISSKKLSKINCE 193
+G+L +YLGVP+ S +L I C+
Sbjct: 51 EGELPMKYLGVPLLSSRLKAIYCK 74
Score = 58.9 bits (141), Expect = 5e-06
Identities = 52/179 (29%), Positives = 74/179 (41%), Gaps = 10/179 (5%)
Frame = +3
Query: 735 VEWQ--YWRAICKLTVPKHSFISWLAMHQRLLTRDRLGKMGLCQDETCLLCGDKNETVEH 908
VEW W K VP+HSF+ W+A+ Q+L T+D+L + G+ C LC NE H
Sbjct: 340 VEWHDIVW---FKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNH 396
Query: 909 LFFQYVYSQACXXXXXXXXXXXXXNVDSTGVWSRIARRSKGRKS--RGFLRAIVAAVINH 1082
LFF+ Y++A W R A S KS + AA + H
Sbjct: 397 LFFECSYTKAIWWDVCDRCDIPRM-TKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYH 455
Query: 1083 VLVARNEALWEHRVLHPRVICKRIQLECKTRYVHNIYRG------QSVKDREWLENIID 1241
V RN ++ P ++ Q+EC R ++ R + R W N ID
Sbjct: 456 VWQERNARIFAGMSRTPNLVLN--QIECIIRDKLDLMRNVVPTNENTRIQRAWRVNTID 512
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 127 bits (320), Expect(2) = 6e-29
Identities = 54/144 (37%), Positives = 88/144 (61%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
LV+K+ +++ W +K L A R+QLV S++ I YW S+F PK V++ I +IC+ F+W
Sbjct: 263 LVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIW 322
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+G + +L+AW C+P G+ +I+ WN A+ K +WN+ +K DNLWVKW++
Sbjct: 323 SGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIHA 382
Query: 556 IYLRGVDRWQYQIPTNSCWY*KRI 627
+L+G + I +NS W K +
Sbjct: 383 YFLKGDNVMSATIKSNSTWILKSV 406
Score = 28.1 bits (61), Expect(2) = 6e-29
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 122 KGKLSFRYLGVPISSKKLS 178
+G L RYLGVP+S KKL+
Sbjct: 238 EGTLPVRYLGVPLSCKKLN 256
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 112 bits (280), Expect(2) = 8e-25
Identities = 49/149 (32%), Positives = 80/149 (53%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L+DK+T+R++ W +K L RVQ+VN + I +W P +V+K I ++C+ F+W
Sbjct: 602 LIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFVW 661
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+ T+ + IAW+ CRPK G+ + + WN V +WN+ K DNLWVKW++
Sbjct: 662 SRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHA 721
Query: 556 IYLRGVDRWQYQIPTNSCWY*KRICGLRQ 642
Y++ + N W K + R+
Sbjct: 722 HYIKNSSVMNTMVTNNFSWVLKNVLSQRE 750
Score = 29.6 bits (65), Expect(2) = 8e-25
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 122 KGKLSFRYLGVPISSKKLS 178
+G+L RYLGVP++SKKL+
Sbjct: 577 EGQLPVRYLGVPLTSKKLN 595
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 114 bits (286), Expect(2) = 1e-23
Identities = 53/149 (35%), Positives = 82/149 (55%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L+D++ +R+KSW K L +A R+QL+ SVL I YW+S + PK V+K I + FLW
Sbjct: 611 LLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLW 670
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
G + +AW C PK G+G+ D WN+A + +IWN+ + S N W WV
Sbjct: 671 AGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKV 730
Query: 556 IYLRGVDRWQYQIPTNSCWY*KRICGLRQ 642
L+G W +P+ W +++ +R+
Sbjct: 731 YLLKGNSFWNAPLPSICSWNWRKLLKIRE 759
Score = 23.5 bits (49), Expect(2) = 1e-23
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSKINC 190
G RYLG+P+ + KL +C
Sbjct: 587 GTCPVRYLGIPLITSKLRMQDC 608
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 102 bits (254), Expect(3) = 1e-22
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L+ K+ ++ W K L Y +++L+ +V+ I ++W IF P++V+ I C FLW
Sbjct: 145 LLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNFWMRIFPLPQSVLDRINASCCNFLW 204
Query: 376 T-GQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVN 552
+ + KP L+AW + C PK+ G+G+ + WN A ++ +W+ K D+L V+WV+
Sbjct: 205 SKADIGKNKP-LVAWPVVCSPKQEGGLGLFNLKDWNLALLSHILWDFHCKKDSLRVRWVH 263
Query: 553 HIYLRGVDRWQYQIPTNSCWY*KRICGLR 639
H Y R D W Y I +++ K+I +R
Sbjct: 264 HYYFRRSDEWNYNISSSNSVLIKKIIQIR 292
Score = 28.9 bits (63), Expect(3) = 1e-22
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 27 SGLTTNASKSNIFSANMNSQVLEDICELTGYGKASF 134
SGL+ ++ KS I+SA + L I +LTG+ F
Sbjct: 88 SGLSISSDKSAIYSAGIRPYELSHIQQLTGFSLGGF 123
Score = 23.5 bits (49), Expect(3) = 1e-22
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLS 178
G FRYLG P+ S +L+
Sbjct: 121 GGFPFRYLGAPLLSSRLN 138
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 106 bits (264), Expect(2) = 2e-22
Identities = 46/122 (37%), Positives = 72/122 (59%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
LVD++ SR SW +HL +A R+QL+ SV+ ++W+SIF+ P + + +C FLW
Sbjct: 330 LVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCNAFLW 389
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+G N+ + A I+WD+ C KE G+G+ WN+ K IW + S +LWV WV
Sbjct: 390 SGAPNSAREAKISWDIVCSSKESGGLGLKRLSSWNKVLALKLIWLLFTASGSLWVSWVRW 449
Query: 556 IY 561
++
Sbjct: 450 VW 451
Score = 27.7 bits (60), Expect(2) = 2e-22
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 122 KGKLSFRYLGVPISSKKLSK 181
+G L RYLGVP+ S+K+ K
Sbjct: 305 QGSLPVRYLGVPLMSQKMKK 324
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 107 bits (266), Expect(2) = 5e-22
Identities = 45/118 (38%), Positives = 72/118 (61%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
LVD++ SR SW +HL +A R+QL+ SV+ ++W+S+F+FP ++ + +C FLW
Sbjct: 783 LVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVFIFPNQCLQKLEQMCNAFLW 842
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWV 549
+G N+ + A I+W++ C PKE G+G+ WN K IW + + +LWV WV
Sbjct: 843 SGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNRILALKLIWLLFTSAGSLWVSWV 900
Score = 25.8 bits (55), Expect(2) = 5e-22
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSK 181
G L RYLGVP+ S+K+ +
Sbjct: 759 GSLPVRYLGVPLMSQKMRR 777
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 107 bits (268), Expect(2) = 8e-22
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L+DK+ +R W TK L +A R+QL++SV+ ++W S F+ PK +K I +C FLW
Sbjct: 781 LIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLW 840
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+ ++W C PK G+G+ + WN+ + IW + + D+LWV W +
Sbjct: 841 GNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHA 900
Query: 556 IYLRGVDRWQYQIPTNSCWY*KRICGLR---QKFGAGYIVNGWL 678
LR V+ W + ++ W K I GLR ++F G + NG L
Sbjct: 901 NRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQL 944
Score = 24.3 bits (51), Expect(2) = 8e-22
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSK 181
G FRYLG+P+ +KL +
Sbjct: 757 GTFPFRYLGLPLLHRKLRR 775
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 102 bits (254), Expect(2) = 1e-21
Identities = 46/150 (30%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L++++ R+ SW ++ L YA R+ L++SVL I ++W + F P+ ++ + +C FLW
Sbjct: 789 LLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLW 848
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+G + A I+W + C+PK+ G+G+ N+ K +W + + S++LWVKWV+
Sbjct: 849 SGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQ 908
Query: 556 IYLRGVDRWQY-QIPTNSCWY*KRICGLRQ 642
LR W+ Q + W K++ R+
Sbjct: 909 HLLRNASFWEVKQTVSQGSWIWKKLLKYRE 938
Score = 28.9 bits (63), Expect(2) = 1e-21
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSKINC 190
G+L RYLG+P+ +K+LS +C
Sbjct: 765 GQLPVRYLGLPLITKRLSTTDC 786
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 95.1 bits (235), Expect(3) = 1e-21
Identities = 43/127 (33%), Positives = 71/127 (55%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L+ K+T ++ W K L YA +++L+ +V+ I ++W IF ++V+ I C FLW
Sbjct: 112 LLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWMKIFPLSQSVLDRINASCCNFLW 171
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+LIAW + C PK+ G+G+ + WN +++ +W+ K D LWV+WV+H
Sbjct: 172 GKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRILWDFHCKKDFLWVRWVHH 231
Query: 556 IYLRGVD 576
Y R D
Sbjct: 232 YYFRASD 238
Score = 31.2 bits (69), Expect(3) = 1e-21
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 27 SGLTTNASKSNIFSANMNSQVLEDICELTGYGKASF 134
SGL+ N+ KS I+SA + L I +LTG+ F
Sbjct: 55 SGLSINSDKSAIYSAGIRPHELSHIQQLTGFNLGGF 90
Score = 25.0 bits (53), Expect(3) = 1e-21
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLS 178
G FRYLGVP+ S +L+
Sbjct: 88 GGFPFRYLGVPLLSSRLN 105
>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Cucumis sativus]
Length = 647
Score = 103 bits (256), Expect(2) = 3e-21
Identities = 48/139 (34%), Positives = 74/139 (53%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L+ +TSR++SW + L +A +QLV VL + YW+S+F+ P V K + I + +LW
Sbjct: 241 LIQCITSRIRSWSARVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLW 300
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
G+ A +AWD C P + G+ + D WN+A+ K +W + KS +LWV WV
Sbjct: 301 RGKEEGRGGAKVAWDEVCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEA 360
Query: 556 IYLRGVDRWQYQIPTNSCW 612
L+G W+ W
Sbjct: 361 YILKGRSLWEIDAGAGRSW 379
Score = 26.9 bits (58), Expect(2) = 3e-21
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSKINCE 193
G L RYLG+P+ S++L +C+
Sbjct: 217 GHLLIRYLGLPLLSRRLRSSDCD 239
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 98.2 bits (243), Expect(3) = 1e-20
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L++++ R+ SW ++ L +A R L++S++ ++W S F P+ ++ I +C FLW
Sbjct: 342 LIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLW 401
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+G +K A I+W+ C+PK G+G+ N+ K +W + + D+LWVKWV H
Sbjct: 402 SGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEH 461
Query: 556 IYLRGVDRWQYQIPTN-SCWY*KRIC---GLRQKFGAGYIVNG 672
L+ W + N W K+I G+ ++F + NG
Sbjct: 462 NLLKREIFWIVKENANLGSWIWKKILKYRGVAKRFCKAEVGNG 504
Score = 27.7 bits (60), Expect(3) = 1e-20
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSKIN 187
G+L RYLG+P+ +K+LS ++
Sbjct: 318 GELPIRYLGLPLVTKRLSSVD 338
Score = 22.3 bits (46), Expect(3) = 1e-20
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 27 SGLTTNASKSNIFSANMNS 83
SGL + KS IFSA ++S
Sbjct: 285 SGLKISMEKSTIFSAGLSS 303
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 105 bits (263), Expect(2) = 1e-20
Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
LV+K+ +R+ SW + L +A R+QL+ SVL I ++W S+F PK ++ I + FLW
Sbjct: 936 LVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLW 995
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+G TK A IAW C+ KE G+G+ NE ++ K IW + + D+LWVKWVN
Sbjct: 996 SGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNK 1055
Query: 556 IYLRGVDRWQYQIPTN-SCWY*KRICGLRQK 645
+R W + T W ++I R K
Sbjct: 1056 HLIRKETFWSVKENTGLGSWLWRKILKQRDK 1086
Score = 22.3 bits (46), Expect(2) = 1e-20
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKLSK 181
G L +YLG+P+ +K++++
Sbjct: 912 GTLPVKYLGLPLLTKRMTQ 930
>ref|XP_006358739.1| PREDICTED: kinesin-like protein cut7-like [Solanum tuberosum]
Length = 904
Score = 107 bits (267), Expect = 1e-20
Identities = 43/70 (61%), Positives = 54/70 (77%)
Frame = +1
Query: 481 EAAVAKYIWNVANKSDNLWVKWVNHIYLRGVDRWQYQIPTNSCWY*KRICGLRQKFGAGY 660
EAAV KY+WN+A K+DNLWV+WV+H+Y++G D WQY IP +SCWY K+IC +R KF GY
Sbjct: 26 EAAVEKYVWNIAQKADNLWVRWVDHVYIKGTDWWQYAIPHDSCWYWKKICRIRDKFAPGY 85
Query: 661 IVNGWLTPTG 690
NG L P G
Sbjct: 86 NQNGSLKPEG 95
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 103 bits (257), Expect(2) = 1e-20
Identities = 49/148 (33%), Positives = 80/148 (54%)
Frame = +1
Query: 196 LVDKMTSRVKSWGTKHLYYAWRVQLVNSVLMHIHSYWSSIFLFPKTVMK*ITTICKIFLW 375
L++K+T+R +SW K L +A R+QL++SV+ ++W S FL PK +K I ++C FLW
Sbjct: 782 LLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLW 841
Query: 376 TGQVNTTKPALIAWDLECRPKEGQGVGVIDCIFWNEAAVAKYIWNVANKSDNLWVKWVNH 555
+G + K ++W C PK G+G+ + WN+ + IW + D+LW W +
Sbjct: 842 SGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHL 901
Query: 556 IYLRGVDRWQYQIPTNSCWY*KRICGLR 639
+L W + + W KR+ LR
Sbjct: 902 HHLSRGSFWAVEGGQSDSWTWKRLLSLR 929
Score = 24.3 bits (51), Expect(2) = 1e-20
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 125 GKLSFRYLGVPISSKKL 175
G L RYLG+P+ ++KL
Sbjct: 758 GTLPIRYLGLPLMNRKL 774