BLASTX nr result
ID: Atropa21_contig00010305
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00010305
(710 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004246011.1| PREDICTED: uncharacterized zinc finger CCHC ... 103 1e-32
ref|XP_006359960.1| PREDICTED: uncharacterized zinc finger CCHC ... 114 1e-29
>ref|XP_004246011.1| PREDICTED: uncharacterized zinc finger CCHC domain-containing
protein At4g19190-like [Solanum lycopersicum]
Length = 682
Score = 103 bits (258), Expect(3) = 1e-32
Identities = 61/158 (38%), Positives = 76/158 (48%)
Frame = +3
Query: 3 FLTGDNVPDLLASLTXXXXXXXXXXXXXXXXXXXXDSTNLRDDKEISSSSDDNRGRALXX 182
FLTGDN+PDLLASL+ +LRDDK+ SSSSDD+ GR+L
Sbjct: 291 FLTGDNMPDLLASLSSKPKKKKKSSKSKNRKRSSPARADLRDDKDFSSSSDDDGGRSLKK 350
Query: 183 XXXXXXXXQSESTEXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGDNDRCQXXXXXXXXXX 362
QS+S++ ED +NDR Q
Sbjct: 351 KKHKKSLKQSKSSDDSDGHQRRSNRQRHQKSSWGKHSVSSSEDDNNDRYQRSNRDRHSRS 410
Query: 363 XXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
PEPE+ +HRKK + HH HD+EDDDND HQKR+NRQ
Sbjct: 411 SS-PEPEDKEHRKKKNHHHSHDSEDDDNDMHQKRNNRQ 447
Score = 43.5 bits (101), Expect(3) = 1e-32
Identities = 19/31 (61%), Positives = 26/31 (83%), Gaps = 2/31 (6%)
Frame = +2
Query: 623 PSPKKRNTEKNHH-HHYHDSKDE-NDRHQKR 709
P P++++ KN+H H+YHDSKD+ NDRHQKR
Sbjct: 493 PEPEEKDHRKNNHRHYYHDSKDDDNDRHQKR 523
Score = 39.7 bits (91), Expect(3) = 1e-32
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +1
Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEH 645
PEPE+K+HR KN QKR+NR + PEP+EK+H
Sbjct: 455 PEPEEKDHRKKNDHHHYRDSEDDDSGRCQKRNNRQ----RSPPEPEEKDH 500
Score = 68.2 bits (165), Expect(3) = 2e-23
Identities = 32/57 (56%), Positives = 35/57 (61%)
Frame = +3
Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
ED DND Q PEPEE DHRKKN HHY D+EDDD+ R QKR+NRQ
Sbjct: 433 EDDDNDMHQKRNNRQKRSRSSSPEPEEKDHRKKNDHHHYRDSEDDDSGRCQKRNNRQ 489
Score = 48.1 bits (113), Expect(3) = 2e-23
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = +1
Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEH 645
PEPE+K+HR N QKRSNRHG LS SPEP+ K+H
Sbjct: 493 PEPEEKDHRKNNHRHYYHDSKDDDNDRHQKRSNRHG--LSGSPEPENKDH 540
Score = 39.7 bits (91), Expect(3) = 2e-23
Identities = 18/31 (58%), Positives = 25/31 (80%), Gaps = 2/31 (6%)
Frame = +2
Query: 623 PSPK-KRNTEKNHHHHYHDSK-DENDRHQKR 709
P P+ K + +KNH+HHY DSK D++DRHQK+
Sbjct: 533 PEPENKDHCKKNHYHHYLDSKDDDDDRHQKK 563
Score = 77.0 bits (188), Expect(2) = 3e-17
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +3
Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNR 473
ED D+ RCQ PEPEE DHRK NHRH+YHD++DDDNDRHQKRSNR
Sbjct: 475 EDDDSGRCQKRNNRQRSP----PEPEEKDHRKNNHRHYYHDSKDDDNDRHQKRSNR 526
Score = 38.1 bits (87), Expect(2) = 3e-17
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1
Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEE 654
PEPE+K+H KN QK+ NR G SPEP++KEH ++
Sbjct: 533 PEPENKDHCKKNHYHHYLDSKDDDDDRHQKKRNRRG----CSPEPEDKEHSKK 581
Score = 63.2 bits (152), Expect(2) = 2e-15
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +3
Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDH-RKKNHRHHYHDAEDDDNDRHQKRSNR 473
+D D+DR Q PEPE+ +H +KKNH HHYHD E+DD D+HQKRSNR
Sbjct: 553 KDDDDDRHQKKRNRRGCS----PEPEDKEHSKKKNHHHHYHDREEDDKDKHQKRSNR 605
Score = 45.4 bits (106), Expect(2) = 2e-15
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 496 PEPEDKEH-RMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEES 657
PEPED EH + K QKRS R RS S SPEP++KEHG+++
Sbjct: 610 PEPEDTEHSKKKKNLLHYCDRDDNDNDRHQKRSRRQRRSRSRSPEPEDKEHGKKN 664
Score = 63.2 bits (152), Expect(2) = 2e-13
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
+D DNDR Q PEPE DH KKNH HHY D++DDD+DRHQK+ NR+
Sbjct: 513 KDDDNDRHQKRSNRHGLSGS--PEPENKDHCKKNHYHHYLDSKDDDDDRHQKKRNRR 567
Score = 38.9 bits (89), Expect(2) = 2e-13
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 496 PEPEDKEH-RMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEE 654
PEPEDKEH + KN QKRSNR R SPEP++ EH ++
Sbjct: 571 PEPEDKEHSKKKNHHHHYHDREEDDKDKHQKRSNRSRR----SPEPEDTEHSKK 620
>ref|XP_006359960.1| PREDICTED: uncharacterized zinc finger CCHC domain-containing
protein At4g19190-like [Solanum tuberosum]
Length = 683
Score = 114 bits (284), Expect(2) = 1e-29
Identities = 65/158 (41%), Positives = 80/158 (50%)
Frame = +3
Query: 3 FLTGDNVPDLLASLTXXXXXXXXXXXXXXXXXXXXDSTNLRDDKEISSSSDDNRGRALXX 182
FLTGDNVPDLLASL+ +LRDDKEISSSSDD+RGR+L
Sbjct: 291 FLTGDNVPDLLASLSSKPKKKKKSSKSKNRKRSSPARADLRDDKEISSSSDDDRGRSLKK 350
Query: 183 XXXXXXXXQSESTEXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGDNDRCQXXXXXXXXXX 362
QS+S++ ED +NDR Q
Sbjct: 351 KKHKKSLKQSKSSDDSDGHQRRSNRQRHPRSSWGKHSESSSEDNNNDRYQRSDRHKRSRS 410
Query: 363 XXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
PEPE+ +HRKK + HHYHD++DDDND+HQKR+NRQ
Sbjct: 411 SS-PEPEDKEHRKKKNHHHYHDSKDDDNDKHQKRNNRQ 447
Score = 42.7 bits (99), Expect(2) = 1e-29
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEES 657
PEPE+K+HR KN QKRSNR SPEP+EK+H +++
Sbjct: 455 PEPEEKDHRKKNDHHHYHDSEDDDSGRRQKRSNRQ----RGSPEPEEKDHRKKN 504
Score = 73.2 bits (178), Expect(2) = 6e-22
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +3
Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
+D DND+ Q PEPEE DHRKKN HHYHD+EDDD+ R QKRSNRQ
Sbjct: 433 KDDDNDKHQKRNNRQKRSRSSSPEPEEKDHRKKNDHHHYHDSEDDDSGRRQKRSNRQ 489
Score = 57.8 bits (138), Expect(2) = 6e-22
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +1
Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEES 657
PEPE+K+HR KN QKRSNRHGRS S+SPEP+ K+H +++
Sbjct: 493 PEPEEKDHRKKNHHHYYHDSKDDDNDRHQKRSNRHGRSRSSSPEPENKDHSKKN 546
Score = 59.7 bits (143), Expect(2) = 4e-16
Identities = 25/35 (71%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +3
Query: 375 EPEETDH-RKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
EPE+ + +KKNH HHYHD EDDD DRHQKRSNR+
Sbjct: 574 EPEDKERSKKKNHHHHYHDREDDDKDRHQKRSNRR 608
Score = 51.6 bits (122), Expect(2) = 4e-16
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 496 PEPEDKEH-RMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEES 657
PEPEDKEH R K QKRS+RH RS S SPEP++KEHG+++
Sbjct: 612 PEPEDKEHSRKKKNLHHYHDRDDDDNDRHQKRSSRHIRSRSRSPEPEDKEHGKKN 666
Score = 72.8 bits (177), Expect(2) = 6e-16
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +3
Query: 372 PEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNR 473
PEPEE DHRKKNH H+YHD++DDDNDRHQKRSNR
Sbjct: 493 PEPEEKDHRKKNHHHYYHDSKDDDNDRHQKRSNR 526
Score = 37.7 bits (86), Expect(2) = 6e-16
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1
Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEE 654
PEPE+K+H KN QK+SNRHG S EP++KE ++
Sbjct: 535 PEPENKDHSKKNHYHHYLDSKDDVKDRHQKKSNRHG----CSAEPEDKERSKK 583
Score = 65.9 bits (159), Expect(2) = 3e-13
Identities = 30/56 (53%), Positives = 34/56 (60%)
Frame = +3
Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNR 473
+D DNDR Q PEPE DH KKNH HHY D++DD DRHQK+SNR
Sbjct: 513 KDDDNDRHQKRSNRHGRSRSSSPEPENKDHSKKNHYHHYLDSKDDVKDRHQKKSNR 568
Score = 35.4 bits (80), Expect(2) = 3e-13
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 499 EPEDKEH-RMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEE 654
EPEDKE + KN QKRSNR RS PEP++KEH +
Sbjct: 574 EPEDKERSKKKNHHHHYHDREDDDKDRHQKRSNRRRRS----PEPEDKEHSRK 622
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDH-RKKNHRHHYHDAEDDDNDRHQKRSNR 473
ED D DR Q PEPE+ +H RKK + HHYHD +DDDNDRHQKRS+R
Sbjct: 594 EDDDKDRHQKRSNRRRRS----PEPEDKEHSRKKKNLHHYHDRDDDDNDRHQKRSSR 646
Score = 43.9 bits (102), Expect(2) = 2e-06
Identities = 19/31 (61%), Positives = 25/31 (80%), Gaps = 2/31 (6%)
Frame = +2
Query: 623 PSPK-KRNTEKNHHHHYHDSKDE-NDRHQKR 709
P P+ K + +K +HHHYHDSKD+ ND+HQKR
Sbjct: 413 PEPEDKEHRKKKNHHHYHDSKDDDNDKHQKR 443
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 583 KRSNRHGRSLSNSPEPKEKEH 645
+RS+RH RS S+SPEP++KEH
Sbjct: 400 QRSDRHKRSRSSSPEPEDKEH 420