BLASTX nr result

ID: Atropa21_contig00010305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00010305
         (710 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246011.1| PREDICTED: uncharacterized zinc finger CCHC ...   103   1e-32
ref|XP_006359960.1| PREDICTED: uncharacterized zinc finger CCHC ...   114   1e-29

>ref|XP_004246011.1| PREDICTED: uncharacterized zinc finger CCHC domain-containing
           protein At4g19190-like [Solanum lycopersicum]
          Length = 682

 Score =  103 bits (258), Expect(3) = 1e-32
 Identities = 61/158 (38%), Positives = 76/158 (48%)
 Frame = +3

Query: 3   FLTGDNVPDLLASLTXXXXXXXXXXXXXXXXXXXXDSTNLRDDKEISSSSDDNRGRALXX 182
           FLTGDN+PDLLASL+                       +LRDDK+ SSSSDD+ GR+L  
Sbjct: 291 FLTGDNMPDLLASLSSKPKKKKKSSKSKNRKRSSPARADLRDDKDFSSSSDDDGGRSLKK 350

Query: 183 XXXXXXXXQSESTEXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGDNDRCQXXXXXXXXXX 362
                   QS+S++                           ED +NDR Q          
Sbjct: 351 KKHKKSLKQSKSSDDSDGHQRRSNRQRHQKSSWGKHSVSSSEDDNNDRYQRSNRDRHSRS 410

Query: 363 XXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
              PEPE+ +HRKK + HH HD+EDDDND HQKR+NRQ
Sbjct: 411 SS-PEPEDKEHRKKKNHHHSHDSEDDDNDMHQKRNNRQ 447



 Score = 43.5 bits (101), Expect(3) = 1e-32
 Identities = 19/31 (61%), Positives = 26/31 (83%), Gaps = 2/31 (6%)
 Frame = +2

Query: 623 PSPKKRNTEKNHH-HHYHDSKDE-NDRHQKR 709
           P P++++  KN+H H+YHDSKD+ NDRHQKR
Sbjct: 493 PEPEEKDHRKNNHRHYYHDSKDDDNDRHQKR 523



 Score = 39.7 bits (91), Expect(3) = 1e-32
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = +1

Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEH 645
           PEPE+K+HR KN                QKR+NR      + PEP+EK+H
Sbjct: 455 PEPEEKDHRKKNDHHHYRDSEDDDSGRCQKRNNRQ----RSPPEPEEKDH 500



 Score = 68.2 bits (165), Expect(3) = 2e-23
 Identities = 32/57 (56%), Positives = 35/57 (61%)
 Frame = +3

Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
           ED DND  Q             PEPEE DHRKKN  HHY D+EDDD+ R QKR+NRQ
Sbjct: 433 EDDDNDMHQKRNNRQKRSRSSSPEPEEKDHRKKNDHHHYRDSEDDDSGRCQKRNNRQ 489



 Score = 48.1 bits (113), Expect(3) = 2e-23
 Identities = 24/50 (48%), Positives = 28/50 (56%)
 Frame = +1

Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEH 645
           PEPE+K+HR  N                QKRSNRHG  LS SPEP+ K+H
Sbjct: 493 PEPEEKDHRKNNHRHYYHDSKDDDNDRHQKRSNRHG--LSGSPEPENKDH 540



 Score = 39.7 bits (91), Expect(3) = 2e-23
 Identities = 18/31 (58%), Positives = 25/31 (80%), Gaps = 2/31 (6%)
 Frame = +2

Query: 623 PSPK-KRNTEKNHHHHYHDSK-DENDRHQKR 709
           P P+ K + +KNH+HHY DSK D++DRHQK+
Sbjct: 533 PEPENKDHCKKNHYHHYLDSKDDDDDRHQKK 563



 Score = 77.0 bits (188), Expect(2) = 3e-17
 Identities = 35/56 (62%), Positives = 39/56 (69%)
 Frame = +3

Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNR 473
           ED D+ RCQ             PEPEE DHRK NHRH+YHD++DDDNDRHQKRSNR
Sbjct: 475 EDDDSGRCQKRNNRQRSP----PEPEEKDHRKNNHRHYYHDSKDDDNDRHQKRSNR 526



 Score = 38.1 bits (87), Expect(2) = 3e-17
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +1

Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEE 654
           PEPE+K+H  KN                QK+ NR G     SPEP++KEH ++
Sbjct: 533 PEPENKDHCKKNHYHHYLDSKDDDDDRHQKKRNRRG----CSPEPEDKEHSKK 581



 Score = 63.2 bits (152), Expect(2) = 2e-15
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +3

Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDH-RKKNHRHHYHDAEDDDNDRHQKRSNR 473
           +D D+DR Q             PEPE+ +H +KKNH HHYHD E+DD D+HQKRSNR
Sbjct: 553 KDDDDDRHQKKRNRRGCS----PEPEDKEHSKKKNHHHHYHDREEDDKDKHQKRSNR 605



 Score = 45.4 bits (106), Expect(2) = 2e-15
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 496 PEPEDKEH-RMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEES 657
           PEPED EH + K                 QKRS R  RS S SPEP++KEHG+++
Sbjct: 610 PEPEDTEHSKKKKNLLHYCDRDDNDNDRHQKRSRRQRRSRSRSPEPEDKEHGKKN 664



 Score = 63.2 bits (152), Expect(2) = 2e-13
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = +3

Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
           +D DNDR Q             PEPE  DH KKNH HHY D++DDD+DRHQK+ NR+
Sbjct: 513 KDDDNDRHQKRSNRHGLSGS--PEPENKDHCKKNHYHHYLDSKDDDDDRHQKKRNRR 567



 Score = 38.9 bits (89), Expect(2) = 2e-13
 Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 496 PEPEDKEH-RMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEE 654
           PEPEDKEH + KN                QKRSNR  R    SPEP++ EH ++
Sbjct: 571 PEPEDKEHSKKKNHHHHYHDREEDDKDKHQKRSNRSRR----SPEPEDTEHSKK 620


>ref|XP_006359960.1| PREDICTED: uncharacterized zinc finger CCHC domain-containing
           protein At4g19190-like [Solanum tuberosum]
          Length = 683

 Score =  114 bits (284), Expect(2) = 1e-29
 Identities = 65/158 (41%), Positives = 80/158 (50%)
 Frame = +3

Query: 3   FLTGDNVPDLLASLTXXXXXXXXXXXXXXXXXXXXDSTNLRDDKEISSSSDDNRGRALXX 182
           FLTGDNVPDLLASL+                       +LRDDKEISSSSDD+RGR+L  
Sbjct: 291 FLTGDNVPDLLASLSSKPKKKKKSSKSKNRKRSSPARADLRDDKEISSSSDDDRGRSLKK 350

Query: 183 XXXXXXXXQSESTEXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGDNDRCQXXXXXXXXXX 362
                   QS+S++                           ED +NDR Q          
Sbjct: 351 KKHKKSLKQSKSSDDSDGHQRRSNRQRHPRSSWGKHSESSSEDNNNDRYQRSDRHKRSRS 410

Query: 363 XXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
              PEPE+ +HRKK + HHYHD++DDDND+HQKR+NRQ
Sbjct: 411 SS-PEPEDKEHRKKKNHHHYHDSKDDDNDKHQKRNNRQ 447



 Score = 42.7 bits (99), Expect(2) = 1e-29
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +1

Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEES 657
           PEPE+K+HR KN                QKRSNR       SPEP+EK+H +++
Sbjct: 455 PEPEEKDHRKKNDHHHYHDSEDDDSGRRQKRSNRQ----RGSPEPEEKDHRKKN 504



 Score = 73.2 bits (178), Expect(2) = 6e-22
 Identities = 33/57 (57%), Positives = 37/57 (64%)
 Frame = +3

Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
           +D DND+ Q             PEPEE DHRKKN  HHYHD+EDDD+ R QKRSNRQ
Sbjct: 433 KDDDNDKHQKRNNRQKRSRSSSPEPEEKDHRKKNDHHHYHDSEDDDSGRRQKRSNRQ 489



 Score = 57.8 bits (138), Expect(2) = 6e-22
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEES 657
           PEPE+K+HR KN                QKRSNRHGRS S+SPEP+ K+H +++
Sbjct: 493 PEPEEKDHRKKNHHHYYHDSKDDDNDRHQKRSNRHGRSRSSSPEPENKDHSKKN 546



 Score = 59.7 bits (143), Expect(2) = 4e-16
 Identities = 25/35 (71%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
 Frame = +3

Query: 375 EPEETDH-RKKNHRHHYHDAEDDDNDRHQKRSNRQ 476
           EPE+ +  +KKNH HHYHD EDDD DRHQKRSNR+
Sbjct: 574 EPEDKERSKKKNHHHHYHDREDDDKDRHQKRSNRR 608



 Score = 51.6 bits (122), Expect(2) = 4e-16
 Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 496 PEPEDKEH-RMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEES 657
           PEPEDKEH R K                 QKRS+RH RS S SPEP++KEHG+++
Sbjct: 612 PEPEDKEHSRKKKNLHHYHDRDDDDNDRHQKRSSRHIRSRSRSPEPEDKEHGKKN 666



 Score = 72.8 bits (177), Expect(2) = 6e-16
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +3

Query: 372 PEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNR 473
           PEPEE DHRKKNH H+YHD++DDDNDRHQKRSNR
Sbjct: 493 PEPEEKDHRKKNHHHYYHDSKDDDNDRHQKRSNR 526



 Score = 37.7 bits (86), Expect(2) = 6e-16
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +1

Query: 496 PEPEDKEHRMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEE 654
           PEPE+K+H  KN                QK+SNRHG     S EP++KE  ++
Sbjct: 535 PEPENKDHSKKNHYHHYLDSKDDVKDRHQKKSNRHG----CSAEPEDKERSKK 583



 Score = 65.9 bits (159), Expect(2) = 3e-13
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = +3

Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDHRKKNHRHHYHDAEDDDNDRHQKRSNR 473
           +D DNDR Q             PEPE  DH KKNH HHY D++DD  DRHQK+SNR
Sbjct: 513 KDDDNDRHQKRSNRHGRSRSSSPEPENKDHSKKNHYHHYLDSKDDVKDRHQKKSNR 568



 Score = 35.4 bits (80), Expect(2) = 3e-13
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 499 EPEDKEH-RMKNXXXXXXXXXXXXXXXXQKRSNRHGRSLSNSPEPKEKEHGEE 654
           EPEDKE  + KN                QKRSNR  RS    PEP++KEH  +
Sbjct: 574 EPEDKERSKKKNHHHHYHDREDDDKDRHQKRSNRRRRS----PEPEDKEHSRK 622



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = +3

Query: 306 EDGDNDRCQXXXXXXXXXXXXXPEPEETDH-RKKNHRHHYHDAEDDDNDRHQKRSNR 473
           ED D DR Q             PEPE+ +H RKK + HHYHD +DDDNDRHQKRS+R
Sbjct: 594 EDDDKDRHQKRSNRRRRS----PEPEDKEHSRKKKNLHHYHDRDDDDNDRHQKRSSR 646



 Score = 43.9 bits (102), Expect(2) = 2e-06
 Identities = 19/31 (61%), Positives = 25/31 (80%), Gaps = 2/31 (6%)
 Frame = +2

Query: 623 PSPK-KRNTEKNHHHHYHDSKDE-NDRHQKR 709
           P P+ K + +K +HHHYHDSKD+ ND+HQKR
Sbjct: 413 PEPEDKEHRKKKNHHHYHDSKDDDNDKHQKR 443



 Score = 34.7 bits (78), Expect(2) = 2e-06
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 583 KRSNRHGRSLSNSPEPKEKEH 645
           +RS+RH RS S+SPEP++KEH
Sbjct: 400 QRSDRHKRSRSSSPEPEDKEH 420


Top