BLASTX nr result

ID: Atropa21_contig00010297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00010297
         (520 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243494.1| PREDICTED: condensin complex subunit 2-like ...    69   2e-20
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...    53   2e-08
emb|CBI28838.3| unnamed protein product [Vitis vinifera]               53   2e-08
ref|XP_006469649.1| PREDICTED: condensin complex subunit 2-like ...    49   4e-06

>ref|XP_004243494.1| PREDICTED: condensin complex subunit 2-like [Solanum lycopersicum]
          Length = 648

 Score = 64.7 bits (156), Expect(2) = 2e-20
 Identities = 32/58 (55%), Positives = 34/58 (58%)
 Frame = +3

Query: 6   FGLVVDDDAFDNCGA*PMDHDDGTSLXXXXXXXXXXXXXXXXXXXEPFTFPYAEDDDK 179
           FG  VDDDAFDNCGA PMDHDDG SL                   +PFTFP AEDDD+
Sbjct: 317 FGPDVDDDAFDNCGAWPMDHDDGISLSEQGSHDVDQISSNQQEDSQPFTFPDAEDDDR 374



 Score = 60.1 bits (144), Expect(2) = 2e-20
 Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +1

Query: 154 FPMLRMMTRSERVDDCLXXXXXXXXKNNSWAGPDHWKYRKVKV---PSKEERKP 306
           FP      RSERVDD L        K+NSWAGPDHWKYRKVKV   PS E+  P
Sbjct: 366 FPDAEDDDRSERVDDYLFLSLGFSSKHNSWAGPDHWKYRKVKVSEEPSNEDGSP 419



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 41/76 (53%), Positives = 43/76 (56%)
 Frame = +2

Query: 293 RRGNQIPDEAC*QSEDFGAMPSLDDDGGFPGTSDDGNAFSESWDDDGGFPGNSD*WQWI* 472
           RRG QIPDEA  QSEDFGAMPS DDDGGFP   DDGN FS+  +                
Sbjct: 495 RRGKQIPDEAGQQSEDFGAMPSWDDDGGFPEAFDDGNTFSDVEESSTLVSQPRQ------ 548

Query: 473 C*YYWVLKSEVQYDKT 520
                V K EVQYDKT
Sbjct: 549 -----VNKIEVQYDKT 559


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score = 52.8 bits (125), Expect(2) = 2e-08
 Identities = 24/42 (57%), Positives = 26/42 (61%)
 Frame = +1

Query: 169 MMTRSERVDDCLXXXXXXXXKNNSWAGPDHWKYRKVKVPSKE 294
           M  R ERVDD L        K N+WAGPDHWKYRKVK P  +
Sbjct: 382 MDDRFERVDDYLFLSLGFASKQNAWAGPDHWKYRKVKGPEDD 423



 Score = 31.2 bits (69), Expect(2) = 2e-08
 Identities = 17/53 (32%), Positives = 21/53 (39%)
 Frame = +3

Query: 21  DDDAFDNCGA*PMDHDDGTSLXXXXXXXXXXXXXXXXXXXEPFTFPYAEDDDK 179
           D DAF+NC     DHDD TS+                    PFT    + DD+
Sbjct: 333 DVDAFENCNTWTFDHDDRTSVVDEDSYGADPVFPVHHEESGPFTVVEPDMDDR 385


>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 52.8 bits (125), Expect(2) = 2e-08
 Identities = 24/42 (57%), Positives = 26/42 (61%)
 Frame = +1

Query: 169 MMTRSERVDDCLXXXXXXXXKNNSWAGPDHWKYRKVKVPSKE 294
           M  R ERVDD L        K N+WAGPDHWKYRKVK P  +
Sbjct: 382 MDDRFERVDDYLFLSLGFASKQNAWAGPDHWKYRKVKGPEDD 423



 Score = 31.2 bits (69), Expect(2) = 2e-08
 Identities = 17/53 (32%), Positives = 21/53 (39%)
 Frame = +3

Query: 21  DDDAFDNCGA*PMDHDDGTSLXXXXXXXXXXXXXXXXXXXEPFTFPYAEDDDK 179
           D DAF+NC     DHDD TS+                    PFT    + DD+
Sbjct: 333 DVDAFENCNTWTFDHDDRTSVVDEDSYGADPVFPVHHEESGPFTVVEPDMDDR 385


>ref|XP_006469649.1| PREDICTED: condensin complex subunit 2-like isoform X1 [Citrus
           sinensis]
          Length = 663

 Score = 48.9 bits (115), Expect(2) = 4e-06
 Identities = 21/36 (58%), Positives = 23/36 (63%)
 Frame = +1

Query: 178 RSERVDDCLXXXXXXXXKNNSWAGPDHWKYRKVKVP 285
           R ERVD+ L        K N+WAGPDHWKYRK K P
Sbjct: 384 RFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGP 419



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +3

Query: 21  DDDAFDNCGA*PMDHDDGTSLXXXXXXXXXXXXXXXXXXXEPFTFPYAEDDDK 179
           D  AFD+CG     HDD +S+                   E F+F   + DD+
Sbjct: 332 DGVAFDDCGTNDFYHDDQSSIVDENLGGSDPTFTSYLEETESFSFQDPDTDDR 384


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