BLASTX nr result

ID: Atropa21_contig00010266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00010266
         (716 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347615.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   117   5e-24
ref|XP_004235277.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   107   5e-21

>ref|XP_006347615.1| PREDICTED: DNA-binding protein SMUBP-2-like [Solanum tuberosum]
          Length = 986

 Score =  117 bits (292), Expect = 5e-24
 Identities = 78/144 (54%), Positives = 83/144 (57%), Gaps = 15/144 (10%)
 Frame = +2

Query: 329 MQVKLLKMEASCNF----STLAPSCLLTR--QKRSNLSSSIGSVTLSNTKNRTFLDXXXX 490
           MQVKLLKMEASCNF    STLAPSCL  R  QKRSNLSS IG       KNR+FLD    
Sbjct: 1   MQVKLLKMEASCNFCSSISTLAPSCLSLRFRQKRSNLSSFIG-------KNRSFLDSISI 53

Query: 491 XXXXXXXXXXXXXXXXXXXXXXXXKPKNTGTNSTSSKNVKTNEIPAVTTKGSSGKVT--- 661
                                   KPKN GTN  SSKNVK NEIPAV+ KGSSGKV    
Sbjct: 54  RATASSSSSGGTKVVTTRRR----KPKNGGTNGASSKNVKVNEIPAVSAKGSSGKVAEKV 109

Query: 662 ------RQQECLQDSGPADVRALN 715
                 +Q+EC QDSGP DVRAL+
Sbjct: 110 QVKRKKQQEECFQDSGPVDVRALH 133


>ref|XP_004235277.1| PREDICTED: DNA-binding protein SMUBP-2-like [Solanum lycopersicum]
          Length = 987

 Score =  107 bits (266), Expect = 5e-21
 Identities = 73/144 (50%), Positives = 79/144 (54%), Gaps = 15/144 (10%)
 Frame = +2

Query: 329 MQVKLLKMEASCNFS----TLAPSCLLT--RQKRSNLSSSIGSVTLSNTKNRTFLDXXXX 490
           MQVKLLKMEASCNF     TLAPSCL    RQKRSNLSS I        KNRTFLD    
Sbjct: 1   MQVKLLKMEASCNFCSSIYTLAPSCLSLRFRQKRSNLSSFI-------AKNRTFLD---S 50

Query: 491 XXXXXXXXXXXXXXXXXXXXXXXXKPKNTGTNSTSSKNVKTNEIPAVTTKGSSGKVT--- 661
                                   KPKN GTN  S KN K +EIPAV+TKGSSGKV    
Sbjct: 51  ISIRATASSSSSGGGTKAVTTRRRKPKNGGTNGGSGKNAKVSEIPAVSTKGSSGKVVDKV 110

Query: 662 ------RQQECLQDSGPADVRALN 715
                 +Q+EC QD GP +VRAL+
Sbjct: 111 QVKRKKQQEECFQDDGPVNVRALH 134


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