BLASTX nr result

ID: Atropa21_contig00010244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00010244
         (1518 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596...    49   2e-09
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                44   4e-08

>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
          Length = 278

 Score = 48.9 bits (115), Expect(2) = 2e-09
 Identities = 20/32 (62%), Positives = 27/32 (84%)
 Frame = +2

Query: 104 GEVIRQDMAQFQLTEDMILDRRLWRTQIRIEG 199
           GEVIRQD+AQ  +TEDM LDR+ WR++I++ G
Sbjct: 247 GEVIRQDLAQLHITEDMTLDRKAWRSRIKVVG 278



 Score = 41.6 bits (96), Expect(2) = 2e-09
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +3

Query: 27  DAPVRRCERLAMDDFRRGRDRPKKY 101
           DAPVRRCE L ++  RRGR RPKKY
Sbjct: 221 DAPVRRCEGLVVEGTRRGRGRPKKY 245


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 44.3 bits (103), Expect(2) = 4e-08
 Identities = 18/30 (60%), Positives = 25/30 (83%)
 Frame = +2

Query: 107 EVIRQDMAQFQLTEDMILDRRLWRTQIRIE 196
           EVIRQD+A   +TEDM LDR+ WR++I++E
Sbjct: 661 EVIRQDLAMLHITEDMTLDRKEWRSRIKVE 690



 Score = 41.6 bits (96), Expect(2) = 4e-08
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 27  DAPVRRCERLAMDDFRRGRDRPKKYQE 107
           DAPVRRCE + ++  RRGR RPKKY E
Sbjct: 634 DAPVRRCEVMVVEGTRRGRGRPKKYWE 660


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