BLASTX nr result
ID: Atropa21_contig00010075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00010075
(1726 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 91 2e-21
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 93 3e-20
ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261... 90 1e-19
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 89 5e-19
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 92 5e-19
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 94 6e-19
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 82 2e-17
ref|XP_004250685.1| PREDICTED: uncharacterized protein LOC101254... 95 1e-16
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 83 5e-16
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 83 5e-16
ref|XP_004240821.1| PREDICTED: uncharacterized protein LOC101254... 91 2e-15
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 80 3e-15
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 80 3e-15
ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660... 88 6e-15
ref|XP_004240779.1| PREDICTED: uncharacterized protein LOC101256... 88 1e-14
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 78 3e-14
ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264... 86 4e-14
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 79 5e-14
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 81 5e-14
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 79 6e-14
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 90.9 bits (224), Expect(2) = 2e-21
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 4/123 (3%)
Frame = +2
Query: 335 IMLKEEEKLKASTI*DLRVYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDF 502
++ + ++ L S + V VL S++ +K PG FFK +W IIGD V +A+LDF
Sbjct: 108 MLSQHQQDLLCSKFTAVEVKNVLFSMDSSKAPGIDGYNVHFFKCSWNIIGDSVIDAILDF 167
Query: 503 FSSGKMCAAIN*ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVD 682
F +G M IN +TL+PK N +S+ +RPI+ C+V+YKIISK+LT+R+Q V++ +V
Sbjct: 168 FKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVLNSVVS 227
Query: 683 NCQ 691
Q
Sbjct: 228 ENQ 230
Score = 40.4 bits (93), Expect(2) = 2e-21
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +1
Query: 700 DIIMIHELVKGYGRKSISPRCMMIVD 777
+II+ HELVK Y RK ISPRCM+ +D
Sbjct: 242 NIILSHELVKSYSRKGISPRCMVKID 267
>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
lycopersicum]
Length = 421
Score = 92.8 bits (229), Expect(2) = 3e-20
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Frame = +2
Query: 335 IMLKEEEKLKASTI*DLRVYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDF 502
++L + + S + + +++A L+SI ++K PG A FFK TW II +++ V F
Sbjct: 93 VVLFYKSLMGTSAVTEEKIFAALQSIGNDKAPGIDGYNAFFFKYTWKIIKNDIIEVVQSF 152
Query: 503 FSSGKMCAAIN*ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVD 682
F GK+ N ++L+PK ++P ++ EYR I+ CTVLYKIISKV+TNR+ V+ ++
Sbjct: 153 FKPGKLFKPFNCTLVSLIPKVQSPKNVKEYRTITCCTVLYKIISKVITNRMHDVIHNVIC 212
Query: 683 NCQ 691
+ Q
Sbjct: 213 DSQ 215
Score = 34.3 bits (77), Expect(2) = 3e-20
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 700 DIIMIHELVKGYGRKSISPRCMMIVD 777
+I++ HELV Y RK+ISPR M+ +D
Sbjct: 227 NILLAHELVNSYTRKNISPRSMLKID 252
>ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261795 [Solanum
lycopersicum]
Length = 413
Score = 90.1 bits (222), Expect(2) = 1e-19
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Frame = +2
Query: 389 VYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITLV 556
+Y+ L+S ++K PG ALFFK TW II +V AV +FF++GK+ N ++L+
Sbjct: 244 IYSTLQSYGNDKAPGIDGYNALFFKHTWKIIKKDVIEAVKNFFTTGKLFKPFNCTLVSLI 303
Query: 557 PKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
PK + P ++ EY PI+ CTVLYKIISKV+T R+ V+ ++ Q
Sbjct: 304 PKVQCPKTVKEYTPIACCTVLYKIISKVITRRMHDVIHDVICESQ 348
Score = 35.0 bits (79), Expect(2) = 1e-19
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1
Query: 700 DIIMIHELVKGYGRKSISPRCMMIVD*YRS 789
+II+ HELVK Y RK+ISPR ++ +D +++
Sbjct: 360 NIILAHELVKTYTRKNISPRIILKIDLHKA 389
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 89.4 bits (220), Expect(2) = 5e-19
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Frame = +2
Query: 401 LKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITLVPKAK 568
L I+D K PG ++FFKK+W +I E+ +LDFF +G M IN ++TL+PK
Sbjct: 450 LADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKID 509
Query: 569 NPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
+YRPI+ C+ LYKIISK+LT RLQ V++ +VD Q
Sbjct: 510 EAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQ 550
Score = 33.9 bits (76), Expect(2) = 5e-19
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +1
Query: 700 DIIMIHELVKGYGRKSISPRCMMIVD 777
+I++ EL++GY R+ +SPRC++ VD
Sbjct: 562 NILLATELIRGYNRRHVSPRCVIKVD 587
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 92.4 bits (228), Expect(2) = 5e-19
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Frame = +2
Query: 386 RVYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITL 553
+V+ ++ + +NK PG LFFKK W I+GD++ AV +FF++GK+ +N A I L
Sbjct: 813 KVWNIISVMANNKAPGPDGFNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIVL 872
Query: 554 VPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
+PK S + +RPIS C +LYKI+SK+L NR+ PV+ ++ Q
Sbjct: 873 IPKHDQASQVNHFRPISCCNLLYKIVSKILANRIAPVLETIIGETQ 918
Score = 30.8 bits (68), Expect(2) = 5e-19
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = +1
Query: 694 ISDIIMIHELVKGYGRKSISPRCMMIVD*YRS 789
+ +I ++ E+++ Y RK SPRC++ +D +++
Sbjct: 928 MDNIFLVQEILRKYARKRPSPRCLLKIDLHKA 959
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 94.4 bits (233), Expect(2) = 6e-19
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Frame = +2
Query: 389 VYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITLV 556
V+ V+ +++NK PG LFFKK W IIGD++ AV +FF++GK+ +N A I L+
Sbjct: 266 VWNVISVMDNNKAPGPDGFNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALI 325
Query: 557 PKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
PK S + +RPIS C +LYKI+SK+L NR+ PV+ ++ Q
Sbjct: 326 PKHDQASQVNHFRPISCCNLLYKIVSKILANRIAPVLETIIGETQ 370
Score = 28.5 bits (62), Expect(2) = 6e-19
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 694 ISDIIMIHELVKGYGRKSISPRCMMIVD*YRS 789
+ +I +I E+++ Y K SPRC++ +D +++
Sbjct: 380 MDNIFLIQEILRKYAWKRSSPRCLLKIDLHKA 411
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 82.0 bits (201), Expect(2) = 2e-17
Identities = 41/101 (40%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Frame = +2
Query: 401 LKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITLVPKAK 568
L I ++K PG A FFKK+W I E+ + +FF++ +M IN +TL+PK +
Sbjct: 447 LAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQ 506
Query: 569 NPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
+ + + E+RPI+ CTV+YKIISK+LTNR++ ++ +V+ Q
Sbjct: 507 HATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQ 547
Score = 35.4 bits (80), Expect(2) = 2e-17
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 700 DIIMIHELVKGYGRKSISPRCMMIVD 777
+I++ EL++GY RK +SPRC+M VD
Sbjct: 559 NILLASELIRGYTRKHMSPRCIMKVD 584
>ref|XP_004250685.1| PREDICTED: uncharacterized protein LOC101254263 [Solanum
lycopersicum]
Length = 140
Score = 94.7 bits (234), Expect = 1e-16
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
Frame = +2
Query: 338 MLKEEEKLK-ASTI*DLRVYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDF 502
+L + ++K +TI D + LKSI +K PG ALFFK TW II +V +AV F
Sbjct: 21 VLSRQHRIKLCATITDHEIVKALKSIGSDKAPGIDGYNALFFKHTWKIIEHDVIDAVKSF 80
Query: 503 FSSGKMCAAIN*ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVL 676
F++G + + N ++L+PK ++P ++ E+RPI+ CTV+YKIISKV+T R+ V+ +
Sbjct: 81 FNTGNLFKSFNCTLVSLIPKVQSPKNVKEFRPIACCTVMYKIISKVITQRMHEVIHTI 138
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 83.2 bits (204), Expect(2) = 5e-16
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Frame = +2
Query: 380 DLRVYAVLKSINDNKEPG----CALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASI 547
D + A KS+ NK G FF+ TW IIG EV A+ +FF SG++ N ++
Sbjct: 309 DDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTL 368
Query: 548 TLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
L+PK N +I E+RPIS LYK+ISK+LT+RLQ ++S ++ + Q
Sbjct: 369 VLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQ 416
Score = 29.6 bits (65), Expect(2) = 5e-16
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 688 STISDIIMIHELVKGYGRKSISPRCMMIVD 777
S ++++ E+V GY R +ISPR M+ VD
Sbjct: 424 SLAENVLLATEMVHGYNRLNISPRGMLKVD 453
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 83.2 bits (204), Expect(2) = 5e-16
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Frame = +2
Query: 380 DLRVYAVLKSINDNKEPG----CALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASI 547
D + A KS+ NK G FF+ TW IIG EV A+ +FF SG++ N ++
Sbjct: 309 DDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTL 368
Query: 548 TLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
L+PK N +I E+RPIS LYK+ISK+LT+RLQ ++S ++ + Q
Sbjct: 369 VLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQ 416
Score = 29.6 bits (65), Expect(2) = 5e-16
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 688 STISDIIMIHELVKGYGRKSISPRCMMIVD 777
S ++++ E+V GY R +ISPR M+ VD
Sbjct: 424 SLAENVLLATEMVHGYNRLNISPRGMLKVD 453
>ref|XP_004240821.1| PREDICTED: uncharacterized protein LOC101254905 [Solanum
lycopersicum]
Length = 224
Score = 90.5 bits (223), Expect = 2e-15
Identities = 47/113 (41%), Positives = 71/113 (62%), Gaps = 4/113 (3%)
Frame = +2
Query: 365 ASTI*DLRVYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAI 532
++ I + +Y L+SI ++K PG A FFK TW II +V AV FF++GKMC
Sbjct: 71 SADITEQEIYTALQSIGNDKAPGIDGYNAFFFKHTWKIIKKDVIEAVKRFFTTGKMCKPF 130
Query: 533 N*ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
N ++L PK ++P ++ EYR I+ CT+L +IISKV+T R+ V+ +V + Q
Sbjct: 131 NCTLVSLFPKVQSPKTVKEYRAIACCTILCQIISKVITKRMHEVIHTVVCDSQ 183
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 80.5 bits (197), Expect(2) = 3e-15
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Frame = +2
Query: 296 ELKGR*FYHFLVIIMLKEEEKLKASTI*DLRVYAVLKSINDNKEPG----CALFFKKTWP 463
ELKG Y + + E+ L + I + V V SI NK PG FF++TW
Sbjct: 698 ELKGILQYRYSL-----HEQNLLVAEITEAEVMKVFFSIPLNKSPGPDGYTVEFFRETWS 752
Query: 464 IIGDEVTNAVLDFFSSGKMCAAIN*ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVL 643
+IG EVT A+ FF+ G + +N + L+PK + +YRPIS C VLYK ISK+L
Sbjct: 753 VIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLL 812
Query: 644 TNRLQ 658
NRL+
Sbjct: 813 ANRLK 817
Score = 30.0 bits (66), Expect(2) = 3e-15
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 694 ISDIIMIHELVKGYGRKSISPRCMMIVD 777
+ ++++ ELVK Y + +SPRC M +D
Sbjct: 838 MENLLLASELVKDYHKDGLSPRCAMKID 865
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 79.7 bits (195), Expect(2) = 3e-15
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Frame = +2
Query: 344 KEEEKLKASTI*DLRVYAVLKSINDNKEPG----CALFFKKTWPIIGDEVTNAVLDFFSS 511
+++ +L + + V+ S+ +K PG + F+K +W IIGDEV A+ FF+
Sbjct: 164 EDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAK 223
Query: 512 GKMCAAIN*ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVM 667
G + +N + L+PK K I +YRPIS C VLYK ISK+L NRL+ ++
Sbjct: 224 GFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRIL 275
Score = 30.4 bits (67), Expect(2) = 3e-15
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 694 ISDIIMIHELVKGYGRKSISPRCMMIVD 777
I ++++ ELVK Y + SIS RC M +D
Sbjct: 293 IENVLLATELVKDYHKDSISTRCAMKID 320
>ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660513 [Glycine max]
Length = 543
Score = 88.2 bits (217), Expect(2) = 6e-15
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Frame = +2
Query: 347 EEEKLKASTI*DLRVYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDFFSSG 514
++ K I D + LKSI D K PG A FFK W II + T+A+ +FF G
Sbjct: 399 DQRKYLIGRITDEEIDKALKSIGDLKAPGIDGYGAKFFKDAWSIIKSDFTDAIREFFEKG 458
Query: 515 KMCAAIN*ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
KM IN + + L+PK + +YRPIS CT +YK+ISKVLT RL V+ +V Q
Sbjct: 459 KMYEPINTSLVILIPKNQEAKYARDYRPISCCTTIYKVISKVLTTRLSRVIKSIVHQSQ 517
Score = 21.2 bits (43), Expect(2) = 6e-15
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 703 IIMIHELVKGYGRK 744
I++ +EL++GY RK
Sbjct: 530 ILLAYELIQGYERK 543
>ref|XP_004240779.1| PREDICTED: uncharacterized protein LOC101256493 [Solanum
lycopersicum]
Length = 441
Score = 87.8 bits (216), Expect = 1e-14
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Frame = +2
Query: 368 STI*DLRVYAVLKSINDNKEPGC----ALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN 535
+TI D + LKSI + K PG ALFFK TW II +V +AV FF++GK+ N
Sbjct: 344 ATITDQEIVEALKSIGNEKAPGIDGYNALFFKHTWKIIEHDVIDAVKSFFTTGKLFKPFN 403
Query: 536 *ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVL 643
+T++PK +P ++ EYRPI+ C VLYKIISKV+
Sbjct: 404 CTLVTVIPKVHSPKNVKEYRPIACCRVLYKIISKVI 439
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 77.8 bits (190), Expect(2) = 3e-14
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +2
Query: 443 FFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITLVPKAKNPSSI*EYRPIS*CTVLY 622
FF WPIIG EVT A+ +FF+SGK+ N ++ L+PK N SS+ ++RPIS +Y
Sbjct: 371 FFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVY 430
Query: 623 KIISKVLTNRLQPVMSVLVDNCQ 691
K+ISK+LT+RL+ + + + Q
Sbjct: 431 KVISKLLTDRLKDFLPAAISHSQ 453
Score = 29.3 bits (64), Expect(2) = 3e-14
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 694 ISDIIMIHELVKGYGRKSISPRCMMIVD 777
+ ++++ ELV GY +K+I+P M+ VD
Sbjct: 463 LENVLLATELVHGYNKKNIAPSSMLKVD 490
>ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264629 [Solanum
lycopersicum]
Length = 261
Score = 86.3 bits (212), Expect = 4e-14
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +2
Query: 437 ALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITLVPKAKNPSSI*EYRPIS*CTV 616
ALFFK TW II +VT AV FF++G + N ++L PK +NP ++ EY PI+ CTV
Sbjct: 4 ALFFKNTWQIIKGDVTEAVKGFFTTGNLHKDFNCTLVSLKPKVQNPKTVKEYSPIACCTV 63
Query: 617 LYKIISKVLTNRLQPVM-SVLVDN 685
+YKIISKVLTNRL V+ SV+ D+
Sbjct: 64 MYKIISKVLTNRLHGVIQSVICDS 87
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 79.0 bits (193), Expect(2) = 5e-14
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Frame = +2
Query: 398 VLKSINDNKEPG----CALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITLVPKA 565
VL + +K PG + FFK TW IIGDE T AV FF+ G + IN + L+PK
Sbjct: 461 VLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKK 520
Query: 566 KNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVM 667
+ +YRPIS C VLYK+ISK++ NRL+ V+
Sbjct: 521 TEAREMKDYRPISCCNVLYKVISKIIANRLKLVL 554
Score = 27.3 bits (59), Expect(2) = 5e-14
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 694 ISDIIMIHELVKGYGRKSISPRCMMIVD 777
I ++++ ELVK Y + +IS RC + +D
Sbjct: 572 IENLLLATELVKDYHKDTISTRCAIKID 599
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 80.9 bits (198), Expect(2) = 5e-14
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +2
Query: 407 SINDNKEPG----CALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN*ASITLVPKAKNP 574
++ NK PG + FFKKTW I+G + AV +FF SG++ N ++T+VPK N
Sbjct: 457 ALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNA 516
Query: 575 SSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
I E+RPIS C +YK+ISK+L RL+ ++ + + Q
Sbjct: 517 DRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQ 555
Score = 25.4 bits (54), Expect(2) = 5e-14
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 700 DIIMIHELVKGYGRKSISPRCMMIVD 777
++++ ELV+G+G+ +IS R ++ VD
Sbjct: 567 NVLLATELVQGFGQANISSRGVLKVD 592
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 79.0 bits (193), Expect(2) = 6e-14
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Frame = +2
Query: 368 STI*DLRVYAVLKSINDNKEPG----CALFFKKTWPIIGDEVTNAVLDFFSSGKMCAAIN 535
ST + + A L S+ NK G A FF +W I+G EVT+A+ +FFSSG + N
Sbjct: 445 STFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWN 504
Query: 536 *ASITLVPKAKNPSSI*EYRPIS*CTVLYKIISKVLTNRLQPVMSVLVDNCQ 691
+I L+PK NP+ ++RPIS LYK+I+++LT+RLQ ++S ++ + Q
Sbjct: 505 ATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQ 556
Score = 26.9 bits (58), Expect(2) = 6e-14
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 688 STISDIIMIHELVKGYGRKSISPRCMMIVD 777
S ++++ +LV GY +ISPR M+ VD
Sbjct: 564 SLAENVLLATDLVHGYNWSNISPRGMLKVD 593