BLASTX nr result

ID: Atropa21_contig00010068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00010068
         (487 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275310.1| transcription initiation factor TFIID subuni...    73   4e-11
ref|XP_004235568.1| PREDICTED: uncharacterized protein LOC101258...    71   2e-10

>ref|NP_001275310.1| transcription initiation factor TFIID subunit 12b-like [Solanum
           tuberosum] gi|77403675|dbj|BAE46416.1| TATA binding
           protein associated factor [Solanum tuberosum]
          Length = 638

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 1   KETVRPGVGDSNHMISPPSSDKLVSQSNASQMLHEMTKF 117
           KETVRPG G+SNHMI PPSSD +VSQSNASQMLHEMT+F
Sbjct: 600 KETVRPGAGESNHMIRPPSSDNMVSQSNASQMLHEMTRF 638


>ref|XP_004235568.1| PREDICTED: uncharacterized protein LOC101258141 [Solanum
           lycopersicum]
          Length = 642

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = +1

Query: 1   KETVRPGVGDSNHMISPPSSDKLVSQSNASQMLHEMTKF 117
           KETVRP  GDSNHMI PPSSD +VSQSNASQMLHEMT+F
Sbjct: 604 KETVRPVAGDSNHMIRPPSSDNMVSQSNASQMLHEMTRF 642


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