BLASTX nr result

ID: Atropa21_contig00010067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00010067
         (583 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275310.1| transcription initiation factor TFIID subuni...    82   8e-14
ref|XP_004235568.1| PREDICTED: uncharacterized protein LOC101258...    80   3e-13

>ref|NP_001275310.1| transcription initiation factor TFIID subunit 12b-like [Solanum
           tuberosum] gi|77403675|dbj|BAE46416.1| TATA binding
           protein associated factor [Solanum tuberosum]
          Length = 638

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = -1

Query: 583 SSAKETVRPGAGDSNHMIRPPSSDKLVSQSNASQMLHEMTRF 458
           SSAKETVRPGAG+SNHMIRPPSSD +VSQSNASQMLHEMTRF
Sbjct: 597 SSAKETVRPGAGESNHMIRPPSSDNMVSQSNASQMLHEMTRF 638


>ref|XP_004235568.1| PREDICTED: uncharacterized protein LOC101258141 [Solanum
           lycopersicum]
          Length = 642

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = -1

Query: 583 SSAKETVRPGAGDSNHMIRPPSSDKLVSQSNASQMLHEMTRF 458
           SSAKETVRP AGDSNHMIRPPSSD +VSQSNASQMLHEMTRF
Sbjct: 601 SSAKETVRPVAGDSNHMIRPPSSDNMVSQSNASQMLHEMTRF 642


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