BLASTX nr result
ID: Atropa21_contig00009992
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00009992 (485 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264... 119 3e-25 ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 117 2e-24 ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts... 113 3e-23 ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263... 100 3e-19 ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts... 82 1e-13 ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm... 80 3e-13 ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852... 80 4e-13 emb|CBI29694.3| unnamed protein product [Vitis vinifera] 80 4e-13 ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 79 5e-13 ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 77 2e-12 emb|CAN72659.1| hypothetical protein VITISV_042717 [Vitis vinifera] 74 3e-11 emb|CAN62711.1| hypothetical protein VITISV_035617 [Vitis vinifera] 73 3e-11 gb|ABP01544.1| UPF3, partial [Nicotiana attenuata] 71 1e-10 gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa... 69 6e-10 gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 69 6e-10 ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts... 62 8e-08 ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts... 62 8e-08 gb|ABE91932.1| Nonsense-mediated decay UPF3 [Medicago truncatula] 59 7e-07 emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera] 56 6e-06 >ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum lycopersicum] Length = 485 Score = 119 bits (299), Expect = 3e-25 Identities = 72/128 (56%), Positives = 74/128 (57%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDKTYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXXX 279 MYVLRDSSKAGSGKDKTYILAPKRDDQ RAEKSGTSAPGSV+N Sbjct: 212 MYVLRDSSKAGSGKDKTYILAPKRDDQQRAEKSGTSAPGSVANAVEEETGGAADVGKKKI 271 Query: 280 XXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILLKDARQN 459 NPN NQRREA GRIIRSILLKDARQN Sbjct: 272 LLLKEKEKENPN--------------------------NQRREASGRIIRSILLKDARQN 305 Query: 460 QAPAASQQ 483 QAP+ASQQ Sbjct: 306 QAPSASQQ 313 >ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1 [Solanum tuberosum] gi|565345688|ref|XP_006339923.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2 [Solanum tuberosum] gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X3 [Solanum tuberosum] Length = 508 Score = 117 bits (292), Expect = 2e-24 Identities = 69/130 (53%), Positives = 81/130 (62%), Gaps = 2/130 (1%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDKTYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXXX 279 MYV RDSSKAG+ KDK+YIL PKR DQ + KSG+SAPGS + Sbjct: 209 MYVQRDSSKAGNSKDKSYILLPKRGDQQLSVKSGSSAPGSEIDVVEGEIGRSVTADSGKK 268 Query: 280 XXXXXXXXXN--PNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILLKDAR 453 PNVS GSL Q+NV+ +KN+ + SALKQNQR+EA GRIIRSILLKDAR Sbjct: 269 KILLLKGKEKEGPNVSGGSLAQQNVSSALKNSPSLSALKQNQRQEASGRIIRSILLKDAR 328 Query: 454 QNQAPAASQQ 483 QNQ+ S Q Sbjct: 329 QNQSAFQSDQ 338 >ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum tuberosum] Length = 483 Score = 113 bits (282), Expect = 3e-23 Identities = 71/128 (55%), Positives = 75/128 (58%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDKTYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXXX 279 MYVLRDSSKAGSGKDKTYILAPKRDDQ RAEKSGTSA GSV+N Sbjct: 212 MYVLRDSSKAGSGKDKTYILAPKRDDQQRAEKSGTSAAGSVANAVEEETGGAADVGKKKI 271 Query: 280 XXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILLKDARQN 459 L++E P NQRREA GRIIRSILLKDARQN Sbjct: 272 L----------------LLKEKENP------------NNQRREASGRIIRSILLKDARQN 303 Query: 460 QAPAASQQ 483 QAP+ASQQ Sbjct: 304 QAPSASQQ 311 >ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum lycopersicum] Length = 438 Score = 99.8 bits (247), Expect = 3e-19 Identities = 62/130 (47%), Positives = 75/130 (57%), Gaps = 2/130 (1%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDKTYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXXX 279 MYV RDSSK G+ KDK+YILA K Q ++KS SAPGS + Sbjct: 209 MYVQRDSSKVGNSKDKSYILASKCGYQQLSDKSSASAPGSWIDVVEGEIGRSVTSDSGKK 268 Query: 280 XXXXXXXXX--NPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILLKDAR 453 +PNVS GSL Q+NV+ +KN+ + SALK NQ +E GRIIRSILLKDAR Sbjct: 269 KILLLKGKEKESPNVSGGSLAQQNVSSALKNSPSLSALKLNQHQEVGGRIIRSILLKDAR 328 Query: 454 QNQAPAASQQ 483 QNQ+ S Q Sbjct: 329 QNQSAFQSDQ 338 >ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4 [Solanum tuberosum] Length = 482 Score = 81.6 bits (200), Expect = 1e-13 Identities = 58/133 (43%), Positives = 68/133 (51%), Gaps = 5/133 (3%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDKTYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXXX 279 MYV RDSSKAG+ KDK+YIL PKR DQ + KSG+SAPGS Sbjct: 209 MYVQRDSSKAGNSKDKSYILLPKRGDQQLSVKSGSSAPGS-------------------- 248 Query: 280 XXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQ-----NQRREACGRIIRSILLK 444 +V G + + A K I K+ NQR+EA GRIIRSILLK Sbjct: 249 ---------EIDVVEGEIGRSVTADSGKKKILLLKGKEKEGPNNQRQEASGRIIRSILLK 299 Query: 445 DARQNQAPAASQQ 483 DARQNQ+ S Q Sbjct: 300 DARQNQSAFQSDQ 312 >ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis] gi|223534215|gb|EEF35930.1| conserved hypothetical protein [Ricinus communis] Length = 472 Score = 80.1 bits (196), Expect = 3e-13 Identities = 55/123 (44%), Positives = 70/123 (56%), Gaps = 2/123 (1%) Frame = +1 Query: 103 YVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXXX 279 YVLRDS+K+ SGKDK TY+L PKRDDQ ++KS A S + Sbjct: 177 YVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASASGTEVLEDESELYHLCLLIVQ 236 Query: 280 XXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDARQ 456 SG + ++N A KN + SSA+KQ+QRRE+ GRIIRSILL KD+RQ Sbjct: 237 L-------------SGGMSKQNAASFDKN-VTSSAIKQSQRRESSGRIIRSILLNKDSRQ 282 Query: 457 NQA 465 NQ+ Sbjct: 283 NQS 285 >ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera] Length = 322 Score = 79.7 bits (195), Expect = 4e-13 Identities = 54/124 (43%), Positives = 69/124 (55%), Gaps = 2/124 (1%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXX 276 MYVLRD++K+ S KDK T+IL PKRDDQ ++KS A G + Sbjct: 1 MYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGK 60 Query: 277 XXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDAR 453 S L+Q+NV +KN + ++A KQNQRRE GRIIRSILL KDAR Sbjct: 61 KKVLLLKGKERE--ISHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDAR 118 Query: 454 QNQA 465 Q+Q+ Sbjct: 119 QSQS 122 >emb|CBI29694.3| unnamed protein product [Vitis vinifera] Length = 519 Score = 79.7 bits (195), Expect = 4e-13 Identities = 54/124 (43%), Positives = 69/124 (55%), Gaps = 2/124 (1%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXX 276 MYVLRD++K+ S KDK T+IL PKRDDQ ++KS A G + Sbjct: 212 MYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGK 271 Query: 277 XXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDAR 453 S L+Q+NV +KN + ++A KQNQRRE GRIIRSILL KDAR Sbjct: 272 KKVLLLKGKERE--ISHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDAR 329 Query: 454 QNQA 465 Q+Q+ Sbjct: 330 QSQS 333 >ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus sinensis] Length = 514 Score = 79.3 bits (194), Expect = 5e-13 Identities = 59/125 (47%), Positives = 68/125 (54%), Gaps = 3/125 (2%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEK-SGTSAPGSVSNXXXXXXXXXXXXXXX 273 MYVLRD++K SGKDK TYIL PKRDDQ + S +SA GS Sbjct: 212 MYVLRDTAKNSSGKDKSTYILVPKRDDQDFDKPVSSSSATGSEVVLEESGVPANSDGGKK 271 Query: 274 XXXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDA 450 VS Q++ + +KN I+S ALKQNQRRE GRIIR ILL KDA Sbjct: 272 KVLLLKGKEREISQVSGSVSHQQSAS--VKNIISSPALKQNQRRENSGRIIRGILLNKDA 329 Query: 451 RQNQA 465 RQNQA Sbjct: 330 RQNQA 334 >ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina] gi|557533707|gb|ESR44825.1| hypothetical protein CICLE_v10000901mg [Citrus clementina] Length = 514 Score = 77.0 bits (188), Expect = 2e-12 Identities = 58/125 (46%), Positives = 67/125 (53%), Gaps = 3/125 (2%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEK-SGTSAPGSVSNXXXXXXXXXXXXXXX 273 MYVLRD++K SGKDK TYIL PKRDDQ + S +SA GS Sbjct: 212 MYVLRDTAKNSSGKDKSTYILVPKRDDQDFDKPVSSSSATGSEVVLEESGVPANSDGGKK 271 Query: 274 XXXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDA 450 VS Q++ + +K I+S ALKQNQRRE GRIIR ILL KDA Sbjct: 272 KVLLLKGKEREISQVSGSVSHQQSAS--VKTIISSPALKQNQRRENSGRIIRGILLNKDA 329 Query: 451 RQNQA 465 RQNQA Sbjct: 330 RQNQA 334 >emb|CAN72659.1| hypothetical protein VITISV_042717 [Vitis vinifera] Length = 437 Score = 73.6 bits (179), Expect = 3e-11 Identities = 53/124 (42%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXX 276 MYVLRD++K S KDK T+IL PKR DQ ++KS A G + Sbjct: 253 MYVLRDAAKNTSAKDKSTFILVPKRADQLLSDKSVNLAAGGGAEALKEESGVSGAVDAGK 312 Query: 277 XXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDAR 453 S L Q+NV +KN + ++A KQNQRRE GRIIRSILL KDAR Sbjct: 313 KKVLLLKGKERE--ISHHLQQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDAR 370 Query: 454 QNQA 465 Q+Q+ Sbjct: 371 QSQS 374 >emb|CAN62711.1| hypothetical protein VITISV_035617 [Vitis vinifera] Length = 355 Score = 73.2 bits (178), Expect = 3e-11 Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXX 276 MYVLRD++K S KDK T+ L PKRDDQ ++KS A G + Sbjct: 193 MYVLRDAAKNTSAKDKSTFSLVPKRDDQLLSDKSVNLAAGGGAEALKEESGVSGAVDAGK 252 Query: 277 XXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDAR 453 S L Q+NV +KN + +++ KQNQRRE GRIIRSILL KDAR Sbjct: 253 KKVLLLKGKERE--ISHHLQQQNVTSPVKNILGANSPKQNQRREGSGRIIRSILLNKDAR 310 Query: 454 QNQA 465 Q+Q+ Sbjct: 311 QSQS 314 >gb|ABP01544.1| UPF3, partial [Nicotiana attenuata] Length = 168 Score = 71.2 bits (173), Expect = 1e-10 Identities = 33/40 (82%), Positives = 37/40 (92%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDKTYILAPKRDDQHRAEKSGTSAPGS 219 MYVLRDSSKAG+GKDK+YIL PKRDDQ ++KSGTSAPGS Sbjct: 112 MYVLRDSSKAGNGKDKSYILVPKRDDQQLSDKSGTSAPGS 151 >gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma cacao] Length = 440 Score = 68.9 bits (167), Expect = 6e-10 Identities = 53/133 (39%), Positives = 66/133 (49%), Gaps = 5/133 (3%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKS---GTSAPGSVSNXXXXXXXXXXXXX 267 MYVLRDS K SGKDK TYIL KRD+Q ++K +S +S Sbjct: 219 MYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASSMGTEISEEESGVPGITDAVK 278 Query: 268 XXXXXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-K 444 +P V+ L Q+NV IK + S+ KQN RRE GR+IR ILL K Sbjct: 279 KKVLLLKGKEKEISP-VAGNVLHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRGILLNK 335 Query: 445 DARQNQAPAASQQ 483 DARQNQ+ + Sbjct: 336 DARQNQSSGVQSE 348 >gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao] Length = 514 Score = 68.9 bits (167), Expect = 6e-10 Identities = 53/133 (39%), Positives = 66/133 (49%), Gaps = 5/133 (3%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKS---GTSAPGSVSNXXXXXXXXXXXXX 267 MYVLRDS K SGKDK TYIL KRD+Q ++K +S +S Sbjct: 212 MYVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASSMGTEISEEESGVPGITDAVK 271 Query: 268 XXXXXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-K 444 +P V+ L Q+NV IK + S+ KQN RRE GR+IR ILL K Sbjct: 272 KKVLLLKGKEKEISP-VAGNVLHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRGILLNK 328 Query: 445 DARQNQAPAASQQ 483 DARQNQ+ + Sbjct: 329 DARQNQSSGVQSE 341 >ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2 [Cicer arietinum] gi|502076758|ref|XP_004485449.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X3 [Cicer arietinum] gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4 [Cicer arietinum] Length = 510 Score = 62.0 bits (149), Expect = 8e-08 Identities = 46/129 (35%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKSGT--SAPGSVSNXXXXXXXXXXXXXX 270 MYV RD K + KDK TYIL P++ DQH + KS S+ G+ + Sbjct: 208 MYVARDPGKNSTVKDKSTYILVPRQGDQHLSNKSSNIASSDGNPTFDENGIAGSNDAGKK 267 Query: 271 XXXXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KD 447 + S ++ K + S+ALKQNQR E GRII+SIL KD Sbjct: 268 VLLLKGKEREIITASDSDSMSQHHSITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKD 327 Query: 448 ARQNQAPAA 474 RQNQ+ A Sbjct: 328 LRQNQSSRA 336 >ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1 [Cicer arietinum] Length = 517 Score = 62.0 bits (149), Expect = 8e-08 Identities = 46/129 (35%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKSGT--SAPGSVSNXXXXXXXXXXXXXX 270 MYV RD K + KDK TYIL P++ DQH + KS S+ G+ + Sbjct: 208 MYVARDPGKNSTVKDKSTYILVPRQGDQHLSNKSSNIASSDGNPTFDENGIAGSNDAGKK 267 Query: 271 XXXXXXXXXXXXNPNVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KD 447 + S ++ K + S+ALKQNQR E GRII+SIL KD Sbjct: 268 VLLLKGKEREIITASDSDSMSQHHSITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKD 327 Query: 448 ARQNQAPAA 474 RQNQ+ A Sbjct: 328 LRQNQSSRA 336 >gb|ABE91932.1| Nonsense-mediated decay UPF3 [Medicago truncatula] Length = 500 Score = 58.9 bits (141), Expect = 7e-07 Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 3/131 (2%) Frame = +1 Query: 100 MYVLRDSSKAGSGKDK-TYILAPKRDDQHRAEKSGTSAPGSVSNXXXXXXXXXXXXXXXX 276 MYV RD K+ + +DK TYIL P++ DQ+ + KS +A + Sbjct: 210 MYVARDPGKSSTVQDKSTYILVPRQGDQNPSNKSSNTASSDGNQTFDENGIAGSNDSGKK 269 Query: 277 XXXXXXXXXXNP-NVSSGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDA 450 VS + ++ K ++S+ALKQNQR E GRII+SIL KD Sbjct: 270 KLLLLKGNERETITVSDSDSMSQHHTSSTKTILSSTALKQNQRHEGRGRIIKSILTNKDF 329 Query: 451 RQNQAPAASQQ 483 RQ+Q+ A + Sbjct: 330 RQSQSSRAHSE 340 >emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera] Length = 304 Score = 55.8 bits (133), Expect = 6e-06 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 1/49 (2%) Frame = +1 Query: 322 SGSLIQENVAPIIKNTIASSALKQNQRREACGRIIRSILL-KDARQNQA 465 S L+Q+NV +KN + ++A KQNQRRE GRIIRSILL KDARQ+Q+ Sbjct: 30 SHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQS 78