BLASTX nr result

ID: Atropa21_contig00009947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00009947
         (475 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349328.1| PREDICTED: YTH domain family protein 1-like ...   135   7e-30
ref|XP_004230452.1| PREDICTED: uncharacterized protein LOC101267...   130   2e-28
ref|XP_006385033.1| hypothetical protein POPTR_0004s23250g [Popu...    61   1e-07
ref|XP_002328776.1| predicted protein [Populus trichocarpa]            61   1e-07
gb|EMJ23995.1| hypothetical protein PRUPE_ppa003557mg [Prunus pe...    59   5e-07
gb|EOX97056.1| Yth domain-containing protein, putative isoform 4...    58   1e-06
gb|EOX97055.1| Yth domain-containing protein, putative isoform 3...    58   1e-06
gb|EOX97053.1| Yth domain-containing protein, putative isoform 1...    58   1e-06

>ref|XP_006349328.1| PREDICTED: YTH domain family protein 1-like [Solanum tuberosum]
          Length = 570

 Score =  135 bits (339), Expect = 7e-30
 Identities = 69/75 (92%), Positives = 71/75 (94%)
 Frame = +3

Query: 3   FNFYEKREKVLKAKRSTKPAIQADVFEKADSLKQIKGGDKVLEEELKTKSADPTASLISL 182
           FNFYEKREKVLKAKRS+KPAIQADV+EKADSLKQ KGGDKVLEEELKT SADPTA LISL
Sbjct: 496 FNFYEKREKVLKAKRSSKPAIQADVYEKADSLKQFKGGDKVLEEELKTNSADPTAPLISL 555

Query: 183 TKTLSINSRPFKSSV 227
           TK LSINSRPFKSSV
Sbjct: 556 TKNLSINSRPFKSSV 570


>ref|XP_004230452.1| PREDICTED: uncharacterized protein LOC101267743 [Solanum
           lycopersicum]
          Length = 563

 Score =  130 bits (326), Expect = 2e-28
 Identities = 65/75 (86%), Positives = 68/75 (90%)
 Frame = +3

Query: 3   FNFYEKREKVLKAKRSTKPAIQADVFEKADSLKQIKGGDKVLEEELKTKSADPTASLISL 182
           FNFYEKREKVLKAKRS+KP IQAD +EKADSLKQ KGGDKVLEEELKT S DPTA L+SL
Sbjct: 489 FNFYEKREKVLKAKRSSKPVIQADAYEKADSLKQFKGGDKVLEEELKTNSTDPTAPLVSL 548

Query: 183 TKTLSINSRPFKSSV 227
           TK LSINSRPFKSSV
Sbjct: 549 TKNLSINSRPFKSSV 563


>ref|XP_006385033.1| hypothetical protein POPTR_0004s23250g [Populus trichocarpa]
           gi|550341801|gb|ERP62830.1| hypothetical protein
           POPTR_0004s23250g [Populus trichocarpa]
          Length = 593

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   FNFYEKREKVLKAKRSTKPA-IQADVFEKADSLKQIKGGDKVLEEELKTKSADPTASLIS 179
           FNFYE REK L  K+S KPA ++ ++FE +D  K     +K+ E++ + K     ++LI+
Sbjct: 503 FNFYENREKSLNTKKSNKPATLRMEIFENSDFPKHTAAEEKISEDDSRAKKTTNPSTLIN 562

Query: 180 LTKTLSINSRPFKSS 224
           LTK LS+N    KS+
Sbjct: 563 LTKNLSLNGHNQKSN 577


>ref|XP_002328776.1| predicted protein [Populus trichocarpa]
          Length = 350

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   FNFYEKREKVLKAKRSTKPA-IQADVFEKADSLKQIKGGDKVLEEELKTKSADPTASLIS 179
           FNFYE REK L  K+S KPA ++ ++FE +D  K     +K+ E++ + K     ++LI+
Sbjct: 260 FNFYENREKSLNTKKSNKPATLRMEIFENSDFPKHTAAEEKISEDDSRAKKTTNPSTLIN 319

Query: 180 LTKTLSINSRPFKSS 224
           LTK LS+N    KS+
Sbjct: 320 LTKNLSLNGHNQKSN 334


>gb|EMJ23995.1| hypothetical protein PRUPE_ppa003557mg [Prunus persica]
          Length = 566

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +3

Query: 3   FNFYEKREKVLKAKRSTKPA-IQADVFEKADSLKQI-KGGDKVLEEELKTKSADPTASLI 176
           F FYE REK LKAKRS+KPA ++ + ++  D  K I  GG  V +E    + A   ASLI
Sbjct: 495 FIFYEDREKSLKAKRSSKPATLKMETYDNNDITKHINSGGRNVDDESAGIRMASDRASLI 554

Query: 177 SLTKTLSINSRP 212
           SLTK LS+N  P
Sbjct: 555 SLTKNLSLNGCP 566


>gb|EOX97056.1| Yth domain-containing protein, putative isoform 4 [Theobroma cacao]
           gi|508705161|gb|EOX97057.1| Yth domain-containing
           protein, putative isoform 4 [Theobroma cacao]
          Length = 548

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   FNFYEKREKVLKAKRSTKPAIQADVFEKADSLKQIKGGDKVLEEELK-TKSADPTASLIS 179
           F FYE REK L AK++ KP    +  ++ D  KQ K G++ +EE+L+ TK      SLI+
Sbjct: 460 FGFYENREKTLNAKKNYKPVTLRN--KEDDFTKQTKAGERRVEEDLRRTKKTSDATSLIN 517

Query: 180 LTKTLSINSRPFKSS 224
           LTK LS+N    K+S
Sbjct: 518 LTKNLSLNGCTLKNS 532


>gb|EOX97055.1| Yth domain-containing protein, putative isoform 3 [Theobroma cacao]
          Length = 572

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   FNFYEKREKVLKAKRSTKPAIQADVFEKADSLKQIKGGDKVLEEELK-TKSADPTASLIS 179
           F FYE REK L AK++ KP    +   K D   Q K G++ +EE+L+ TK      SLI+
Sbjct: 485 FGFYENREKTLNAKKNYKPVTLRN---KEDDFTQTKAGERRVEEDLRRTKKTSDATSLIN 541

Query: 180 LTKTLSINSRPFKSS 224
           LTK LS+N    K+S
Sbjct: 542 LTKNLSLNGCTLKNS 556


>gb|EOX97053.1| Yth domain-containing protein, putative isoform 1 [Theobroma cacao]
          Length = 573

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   FNFYEKREKVLKAKRSTKPAIQADVFEKADSLKQIKGGDKVLEEELK-TKSADPTASLIS 179
           F FYE REK L AK++ KP    +  ++ D  KQ K G++ +EE+L+ TK      SLI+
Sbjct: 485 FGFYENREKTLNAKKNYKPVTLRN--KEDDFTKQTKAGERRVEEDLRRTKKTSDATSLIN 542

Query: 180 LTKTLSINSRPFKSS 224
           LTK LS+N    K+S
Sbjct: 543 LTKNLSLNGCTLKNS 557


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