BLASTX nr result
ID: Atropa21_contig00009633
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00009633 (646 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAM28759.1| ROX1 homologue [Nicotiana tabacum] 127 2e-27 dbj|BAM28758.1| ROX1 homologue [Nicotiana benthamiana] 125 1e-26 ref|XP_004232917.1| PREDICTED: uncharacterized protein LOC101261... 121 2e-25 ref|XP_006364298.1| PREDICTED: protein E6-like [Solanum tuberosum] 119 8e-25 gb|ABH01084.1| putative ROX1 [Nicotiana tabacum] 116 5e-24 ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|14... 56 8e-06 >dbj|BAM28759.1| ROX1 homologue [Nicotiana tabacum] Length = 346 Score = 127 bits (320), Expect = 2e-27 Identities = 78/151 (51%), Positives = 81/151 (53%), Gaps = 12/151 (7%) Frame = +2 Query: 2 NNNQQQQQFYSGDNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----- 166 NN QQQQQFYSGDNF Sbjct: 161 NNQQQQQQFYSGDNFYSNNQQQQQYYNGGNSYNNNNDNNNNEEEEEYYNNNGGNTYYNNN 220 Query: 167 --QRLTETRLSARXXXXXXXXXXXXXXX--QEQSYSTNYN---TGTANYRVHQQQGMSDT 325 Q L+ETRLSAR QEQSYSTNYN TG +NYRVHQQQGMSDT Sbjct: 221 EQQELSETRLSARTYSTNPTNYGNNYNNNNQEQSYSTNYNNYNTGKSNYRVHQQQGMSDT 280 Query: 326 RFLGSGKFYYDINAEKHARDPYENAREFAAM 418 RFLG+GKFYYDINAEKHARDPYENAREFAAM Sbjct: 281 RFLGNGKFYYDINAEKHARDPYENAREFAAM 311 >dbj|BAM28758.1| ROX1 homologue [Nicotiana benthamiana] Length = 346 Score = 125 bits (313), Expect = 1e-26 Identities = 76/150 (50%), Positives = 80/150 (53%), Gaps = 11/150 (7%) Frame = +2 Query: 2 NNNQQQQQFYSGDNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----- 166 NN Q+QQQFYSGDNF Sbjct: 162 NNQQKQQQFYSGDNFYSNNQQQQQDYNGGNTYNNNDNNNEEEEEYYNNNGGNTYNNNNNE 221 Query: 167 -QRLTETRLSARXXXXXXXXXXXXXXX--QEQSYSTNYN---TGTANYRVHQQQGMSDTR 328 Q +ETRLSAR QEQSYSTNYN TG +NYRVHQQQGMSDTR Sbjct: 222 QQEFSETRLSARTYSTNPTNYGNNYNNNNQEQSYSTNYNNYNTGKSNYRVHQQQGMSDTR 281 Query: 329 FLGSGKFYYDINAEKHARDPYENAREFAAM 418 FLG+GKFYYDINAEKHARDPYENAREFAAM Sbjct: 282 FLGNGKFYYDINAEKHARDPYENAREFAAM 311 >ref|XP_004232917.1| PREDICTED: uncharacterized protein LOC101261288 [Solanum lycopersicum] Length = 342 Score = 121 bits (304), Expect = 2e-25 Identities = 73/147 (49%), Positives = 79/147 (53%), Gaps = 8/147 (5%) Frame = +2 Query: 2 NNNQQQQQFYSGDNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLTE 181 NNN QQQQFYSGD+F Q TE Sbjct: 174 NNNYQQQQFYSGDSFYSNNQQYNNNDNNEEEYYNASNTYYNNNYEPQ--------QEFTE 225 Query: 182 TRLSARXXXXXXXXXXXXXXXQEQSYSTNYN--------TGTANYRVHQQQGMSDTRFLG 337 TRLSA+ QEQSYSTNYN TG +NYRVHQQQGMSDTRFLG Sbjct: 226 TRLSAKSYNTNPTNYNNN---QEQSYSTNYNSNEEQSYNTGNSNYRVHQQQGMSDTRFLG 282 Query: 338 SGKFYYDINAEKHARDPYENAREFAAM 418 +GKFYYDINA +HARDPYENA+EFAAM Sbjct: 283 NGKFYYDINAGRHARDPYENAKEFAAM 309 >ref|XP_006364298.1| PREDICTED: protein E6-like [Solanum tuberosum] Length = 352 Score = 119 bits (298), Expect = 8e-25 Identities = 72/148 (48%), Positives = 79/148 (53%), Gaps = 9/148 (6%) Frame = +2 Query: 2 NNNQQQQQFYSGDNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLTE 181 N+N QQQQFYSGD+F Q LTE Sbjct: 177 NHNTQQQQFYSGDSFYSNNQQYNNNDNNEEENYNAGNTYYNNNYEPQ--------QELTE 228 Query: 182 TRLSARXXXXXXXXXXXXXXX-QEQSYSTNYN--------TGTANYRVHQQQGMSDTRFL 334 TRLSA+ QEQSYSTNYN TG NYRVHQQQGMSDTRFL Sbjct: 229 TRLSAKNYNTNPTNYGNNNNNNQEQSYSTNYNNNEEQSYSTGNGNYRVHQQQGMSDTRFL 288 Query: 335 GSGKFYYDINAEKHARDPYENAREFAAM 418 G+GKFYYDINA +HARDPYENA+EFA+M Sbjct: 289 GNGKFYYDINAGRHARDPYENAKEFASM 316 >gb|ABH01084.1| putative ROX1 [Nicotiana tabacum] Length = 346 Score = 116 bits (291), Expect = 5e-24 Identities = 72/149 (48%), Positives = 77/149 (51%), Gaps = 11/149 (7%) Frame = +2 Query: 5 NNQQQQQFYSGDNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ 166 +N QQQQFY GDNF Sbjct: 163 SNNQQQQFYGGDNFYSNNQQKQQYYNGGNTYNNNDNNNNNEEEEYYNNGNTYYNNNNNNE 222 Query: 167 -QRLTETRLSARXXXXXXXXXXXXXXX-QEQSYSTNYN---TGTANYRVHQQQGMSDTRF 331 + L+ETRLSA QEQSYSTNYN TG +NYRVHQQQGMSDTRF Sbjct: 223 QEELSETRLSASTYSTNPTNYGNNYHNHQEQSYSTNYNNYNTGKSNYRVHQQQGMSDTRF 282 Query: 332 LGSGKFYYDINAEKHARDPYENAREFAAM 418 LG+GKFYYDINA KHARDPYENAREFAAM Sbjct: 283 LGNGKFYYDINAGKHARDPYENAREFAAM 311 >ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|147778580|emb|CAN60306.1| hypothetical protein VITISV_005068 [Vitis vinifera] Length = 253 Score = 56.2 bits (134), Expect = 8e-06 Identities = 25/48 (52%), Positives = 35/48 (72%) Frame = +2 Query: 260 STNYNTGTANYRVHQQQGMSDTRFLGSGKFYYDINAEKHARDPYENAR 403 + N N N +QQGMSDTRFL +G++YYD+N+EK+ R+ YEN+R Sbjct: 158 NNNNNNNNNNGYNTKQQGMSDTRFLENGRYYYDLNSEKNYRNEYENSR 205