BLASTX nr result
ID: Atropa21_contig00009566
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00009566 (994 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 502 e-139 ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 496 e-138 gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 359 8e-97 ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 356 9e-96 emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 356 9e-96 ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 355 2e-95 ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 354 3e-95 ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 353 4e-95 gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 346 7e-93 ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 346 9e-93 ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 346 9e-93 ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps... 345 2e-92 dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 344 3e-92 ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 343 5e-92 gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana] 343 5e-92 ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr... 335 1e-89 emb|CAB83107.1| sigma factor 3 [Sinapis alba] 334 4e-89 emb|CAD20832.1| sigma factor [Spinacia oleracea] 329 9e-88 ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 329 1e-87 ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [A... 313 5e-83 >ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum] Length = 555 Score = 502 bits (1292), Expect = e-139 Identities = 249/267 (93%), Positives = 258/267 (96%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 GRVATFS+WA AAG+EQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI Sbjct: 289 GRVATFSSWAEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 348 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQI K Sbjct: 349 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHK 408 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARKTLSRSHGKFP D+EIAK TGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD Sbjct: 409 ARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 468 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 KSITSPE TVMRQDI+D MY+LLESLDPKE+QVIYFRFGLETHQRKSLEEIGRLYGVSKE Sbjct: 469 KSITSPEETVMRQDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKE 528 Query: 274 WIRRIERRALTKLRSTDCFQHLAHYSV 194 WIRRIERRALTKLR+ D FQH+ HYS+ Sbjct: 529 WIRRIERRALTKLRNADYFQHITHYSM 555 >ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum lycopersicum] Length = 551 Score = 496 bits (1278), Expect = e-138 Identities = 246/267 (92%), Positives = 256/267 (95%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VATFS+WA AAG+EQKELQQ LHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI Sbjct: 285 GQVATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 344 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQI K Sbjct: 345 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHK 404 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARKTLSRSHGKFP D+EIAK TGLSTARIAMASKCLRVVGSIDQKVGDCI+AKVLELTPD Sbjct: 405 ARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCINAKVLELTPD 464 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 KS+TSPE VMRQDI+D MYALLESLDPKE+QVIYFRFGLETHQRKSLEEIGRLYGVSKE Sbjct: 465 KSVTSPEEFVMRQDIVDNMYALLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKE 524 Query: 274 WIRRIERRALTKLRSTDCFQHLAHYSV 194 WIRRIERRALTKLRS D FQH+ HYS+ Sbjct: 525 WIRRIERRALTKLRSADYFQHITHYSL 551 >gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao] Length = 848 Score = 359 bits (922), Expect = 8e-97 Identities = 172/265 (64%), Positives = 218/265 (82%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 GR A+ S WA AAG+ +K LQQ L FGWYCRDELL+STRSLVLY ARNYRGLG+A EDLI Sbjct: 581 GRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLI 640 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAG++GVLQGA RFDHTRGY+FSTYVQ+WIRKS+S++VA+HARG+++P T+ + I QI+K Sbjct: 641 QAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQK 700 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK LS+SHGK+PD++ IAK TGLS A+I A+KC+RVVGSIDQK+GDC++AK LE PD Sbjct: 701 ARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEFIPD 760 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 S+ SPE TVMRQ + + ++ LL LD +E+QV+ R+GL+ KSLEEIGRL+ VSKE Sbjct: 761 LSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHVSKE 820 Query: 274 WIRRIERRALTKLRSTDCFQHLAHY 200 WIRRIE +A+ KLR + ++L+HY Sbjct: 821 WIRRIEMKAMKKLRDKETCRNLSHY 845 >ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera] gi|296081598|emb|CBI20603.3| unnamed protein product [Vitis vinifera] Length = 561 Score = 356 bits (913), Expect = 9e-96 Identities = 171/265 (64%), Positives = 210/265 (79%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G VA+ SNWA AAG+++K LQQ+L FGWYCRDELL+ST SLVLY+ARNYRG+GVAFED++ Sbjct: 294 GHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDIL 353 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+GVLQGA RFDHT+GY+FSTYVQYWIRKS+S LVA+HARGV+IPFT+ + I QI+K Sbjct: 354 QAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQK 413 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK L +SHG++PDDNEIAK TGLS A+I A CLRVVGS DQ DC A +LE TPD Sbjct: 414 ARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPD 473 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 SI SPE M+Q ++ LL+ LDP+E+Q++ R+G QRKSLEEIGR + VSKE Sbjct: 474 TSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKE 533 Query: 274 WIRRIERRALTKLRSTDCFQHLAHY 200 WIR++E+ AL LR + Q+L HY Sbjct: 534 WIRKLEKTALANLRDEEICQNLRHY 558 >emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] Length = 611 Score = 356 bits (913), Expect = 9e-96 Identities = 171/265 (64%), Positives = 210/265 (79%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G VA+ SNWA AAG+++K LQQ+L FGWYCRDELL+ST SLVLY+ARNYRG+GVAFED++ Sbjct: 344 GHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDIL 403 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+GVLQGA RFDHT+GY+FSTYVQYWIRKS+S LVA+HARGV+IPFT+ + I QI+K Sbjct: 404 QAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQK 463 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK L +SHG++PDDNEIAK TGLS A+I A CLRVVGS DQ DC A +LE TPD Sbjct: 464 ARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPD 523 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 SI SPE M+Q ++ LL+ LDP+E+Q++ R+G QRKSLEEIGR + VSKE Sbjct: 524 TSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKE 583 Query: 274 WIRRIERRALTKLRSTDCFQHLAHY 200 WIR++E+ AL LR + Q+L HY Sbjct: 584 WIRKLEKTALANLRDEEICQNLRHY 608 >ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis] gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis] Length = 560 Score = 355 bits (911), Expect = 2e-95 Identities = 171/264 (64%), Positives = 216/264 (81%) Frame = -1 Query: 991 RVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQ 812 RV + S WA AAGL+ K LQQ+L FGWYCRDEL+KSTRSLVLY ARNYRG G+A EDL+Q Sbjct: 294 RVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQ 353 Query: 811 AGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRKA 632 AGN+GVL+GA RFDHTRGY+FSTYVQYWIRKS+SK+V++ ARG++IP T+ + I QI+KA Sbjct: 354 AGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKA 413 Query: 631 RKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDK 452 RK L+ S+GK+PDD+EIAK TGLS A+I AS+CLRVVGSIDQK+G+ ++AK LE PD Sbjct: 414 RKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDT 473 Query: 451 SITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKEW 272 S+ SPE VMRQ +I M+ LL SLD +E+QV+ RFGL +Q KSLEEIGR + VSKEW Sbjct: 474 SVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEW 533 Query: 271 IRRIERRALTKLRSTDCFQHLAHY 200 +RR+E+R +T+LR+ + ++L HY Sbjct: 534 VRRLEKRVMTRLRNEETCRNLRHY 557 >ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina] gi|557553989|gb|ESR64003.1| hypothetical protein CICLE_v10007968mg [Citrus clementina] Length = 534 Score = 354 bits (909), Expect = 3e-95 Identities = 165/268 (61%), Positives = 221/268 (82%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+ A+ + WA AAG+ ++ L+Q L FGWYCR+EL+KSTR LVL+LARNYRGLG+ F DL+ Sbjct: 267 GKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLL 326 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+GVLQGA RFDHTRGYKFSTYVQYWIRKS+SK+VA+HARG++IP + + I++I+K Sbjct: 327 QAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQK 386 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK L+ SHGK+P+D EIAK TGLS A I AS+CLR+VGSIDQK+GDC++AK LE PD Sbjct: 387 ARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEFAPD 446 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 +S+ SP+ VMRQ + ++ +LESLD +E+QV+ R+GL H+ KSLEEIG+L+ VSKE Sbjct: 447 RSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHVSKE 506 Query: 274 WIRRIERRALTKLRSTDCFQHLAHYSVV 191 WIR++E++A+TKLR ++ + L+H+ V+ Sbjct: 507 WIRKLEKKAMTKLRDSETCRDLSHFLVL 534 >ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis] Length = 534 Score = 353 bits (907), Expect = 4e-95 Identities = 165/268 (61%), Positives = 220/268 (82%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+ A + WA AAG+ ++ L+Q L FGWYCR+EL+KSTR LVL+LARNYRGLG+ F DL+ Sbjct: 267 GKAARLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLL 326 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+GVLQGA RFDHTRGYKFSTYVQYWIRKS+SK+VA+HARG++IP + + I++I+K Sbjct: 327 QAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQK 386 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK L+ SHGK+P+D EIAK TGLS A I AS+CLR+VGSIDQK+GDC++AK LE PD Sbjct: 387 ARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEFAPD 446 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 +S+ SP+ VMRQ + ++ +LESLD +E+QV+ R+GL H+ KSLEEIG+L+ VSKE Sbjct: 447 RSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHVSKE 506 Query: 274 WIRRIERRALTKLRSTDCFQHLAHYSVV 191 WIR++E++A+TKLR ++ + L+H+ V+ Sbjct: 507 WIRKLEKKAMTKLRDSETCRDLSHFLVL 534 >gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica] Length = 555 Score = 346 bits (888), Expect = 7e-93 Identities = 169/265 (63%), Positives = 211/265 (79%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VAT WA AAG+ +K L Q L FGWYC+DEL++STRSLVLYLARNYRGLGVA +DL+ Sbjct: 288 GKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLM 347 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+G+LQGA RFDH+RGY+FSTYVQYWIRKS+S+LVAQHARGV+IPFT+ K INQI+K Sbjct: 348 QAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQK 407 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK SH K+PDD EIAK+TGLS ARI AS CLRVVGS+D K+ + +E TPD Sbjct: 408 ARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTPD 467 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 S+ SPE TVMRQ + ++ LL+ L+ +E+QV+ R+GL + KSLEEIGRL+ VSKE Sbjct: 468 TSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSKE 527 Query: 274 WIRRIERRALTKLRSTDCFQHLAHY 200 WIR+IE++AL KLR + ++L+HY Sbjct: 528 WIRKIEKKALMKLRVEESHKYLSHY 552 >ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca subsp. vesca] Length = 545 Score = 346 bits (887), Expect = 9e-93 Identities = 165/265 (62%), Positives = 217/265 (81%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+V T WA AAG+++K LQQ+LHFGWYC+DEL++STRSLVLYLARNYRGLGVA +DL+ Sbjct: 277 GKVPTLRCWAEAAGVDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLL 336 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+G+LQGA RFD +RGY+FSTYVQYWIRKS+S+LVAQHARG++IP T+ K IN+I+K Sbjct: 337 QAGNLGLLQGAERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIPNTLSKAINRIQK 396 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK SH K+PDD EIAK+TGLS A+I+ AS+CLRVVGS+D K+ +C + +E TPD Sbjct: 397 ARKANYNSHMKYPDDEEIAKITGLSLAKISSASRCLRVVGSVDHKIWECSAGTYMEFTPD 456 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 ++ +PE +VMRQ + + ++ LLE L+ +EK+V+ R+GL KSLEEIGRL+ VSKE Sbjct: 457 IAVETPEESVMRQHMKNDIHVLLEGLNSREKKVLALRYGLNYCNPKSLEEIGRLFHVSKE 516 Query: 274 WIRRIERRALTKLRSTDCFQHLAHY 200 WIR+IE+ ALTKLR+ + ++L+HY Sbjct: 517 WIRKIEKNALTKLRNEESNKNLSHY 541 >ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297323785|gb|EFH54206.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 568 Score = 346 bits (887), Expect = 9e-93 Identities = 171/266 (64%), Positives = 212/266 (79%), Gaps = 1/266 (0%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VA+ S WA AAG+ +K L + LH+GWYCRDELLKSTRSLVL+LARNYRGLG+A EDLI Sbjct: 300 GKVASLSCWAEAAGMNEKLLMRNLHYGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLI 359 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAG +GVLQGA RFDHTRGYKFSTYVQYWIRKS+S +V++HARGV IP +I + INQI+K Sbjct: 360 QAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHIPSSIIRTINQIQK 419 Query: 634 ARKTLSRSHG-KFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTP 458 ARKTL SHG K+P D +I+KLT LS +I A++CL+VVGSI++KVGDC S K LE TP Sbjct: 420 ARKTLKTSHGIKYPADEDISKLTSLSVKKIRAANQCLKVVGSIEKKVGDCFSTKFLEFTP 479 Query: 457 DKSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSK 278 D ++ SPE VMRQ ++ LLE L+P+EKQV+ R+GL+ ++ KSLEEIG+L VSK Sbjct: 480 DTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQNYRPKSLEEIGKLLRVSK 539 Query: 277 EWIRRIERRALTKLRSTDCFQHLAHY 200 EWIR+IERRA+ KLR + L +Y Sbjct: 540 EWIRKIERRAMAKLRDQPNAEDLRYY 565 >ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella] gi|482559522|gb|EOA23713.1| hypothetical protein CARUB_v10016920mg [Capsella rubella] Length = 581 Score = 345 bits (884), Expect = 2e-92 Identities = 172/266 (64%), Positives = 209/266 (78%), Gaps = 1/266 (0%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VA+ S WA AAG+ +K L + LH+GWYCRDELLKSTRSLVL+LARNYRGLG+A EDLI Sbjct: 313 GKVASLSCWAEAAGMNEKLLMRNLHYGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLI 372 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAG +GVLQGA RFDH RGYKFSTYVQYWIRKS+S +V++HARGV IP +I + INQI+K Sbjct: 373 QAGFVGVLQGAERFDHARGYKFSTYVQYWIRKSMSMMVSRHARGVHIPSSIIRTINQIQK 432 Query: 634 ARKTLSRSHG-KFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTP 458 ARKTL SHG K+P D EI+KLT LS +I A++CL+VVGSI+ KVGDC S K LE TP Sbjct: 433 ARKTLKTSHGIKYPADEEISKLTSLSVKKIRAANQCLKVVGSIENKVGDCFSTKFLEFTP 492 Query: 457 DKSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSK 278 D + SPE VMRQ ++ LLE L+P+EKQV+ R+GL+ ++ KSLEEIG+L VSK Sbjct: 493 DTMMESPEEAVMRQSARRDLHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLRVSK 552 Query: 277 EWIRRIERRALTKLRSTDCFQHLAHY 200 EWIRRIERRA+ KLR + L +Y Sbjct: 553 EWIRRIERRAMAKLRDQPNAEDLRYY 578 >dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana] Length = 571 Score = 344 bits (883), Expect = 3e-92 Identities = 170/266 (63%), Positives = 212/266 (79%), Gaps = 1/266 (0%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VA+ S WAAAAG+ +K L + LH+GWYCRDEL+KSTRSLVL+LARNYRG+G+A EDLI Sbjct: 303 GKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGMGIAHEDLI 362 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAG +GVLQGA RFDHTRGYKFSTYVQYWIRKS+S +V++HARGV IP +I + IN I+K Sbjct: 363 QAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQK 422 Query: 634 ARKTLSRSHG-KFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTP 458 ARKTL SHG K+ D EIAKLTG S +I A++CL+VVGSID+KVGDC + K LE TP Sbjct: 423 ARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTP 482 Query: 457 DKSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSK 278 D ++ SPE VMRQ ++ LLE L+P+EKQV+ R+GL+ ++ KSLEEIG+L+ VSK Sbjct: 483 DTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLFKVSK 542 Query: 277 EWIRRIERRALTKLRSTDCFQHLAHY 200 EWIR+IERRA+ KLR + L +Y Sbjct: 543 EWIRKIERRAMAKLRDQPNAEDLRYY 568 >ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana] gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA polymerase sigma factor sigC; Short=Sigma factor C; Short=Sigma-C; AltName: Full=RNA polymerase sigma factor sig3; Short=Atsig3; Short=Sigma factor 3; Flags: Precursor gi|2353175|gb|AAB69386.1| sigma factor 3 [Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC [Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma factor SigC [Arabidopsis thaliana] gi|7630012|emb|CAB88354.1| sigma factor SigC [Arabidopsis thaliana] gi|133778870|gb|ABO38775.1| At3g53920 [Arabidopsis thaliana] gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit C [Arabidopsis thaliana] Length = 571 Score = 343 bits (881), Expect = 5e-92 Identities = 171/266 (64%), Positives = 211/266 (79%), Gaps = 1/266 (0%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VA+ S WAAAAG+ +K L + LH+GWYCRDEL+KSTRSLVL+LARNYRGLG+A EDLI Sbjct: 303 GKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLI 362 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAG +GVLQGA RFDHTRGYKFSTYVQYWIRKS+S +V++HARGV IP +I + IN I+K Sbjct: 363 QAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQK 422 Query: 634 ARKTLSRSHG-KFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTP 458 ARKTL SHG K+ D EIAKLTG S +I A++CL+VVGSID+KVGDC + K LE TP Sbjct: 423 ARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTP 482 Query: 457 DKSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSK 278 D ++ SPE VMRQ ++ LLE L+P+EKQV+ R+GL+ ++ KSLEEIG+L VSK Sbjct: 483 DTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSK 542 Query: 277 EWIRRIERRALTKLRSTDCFQHLAHY 200 EWIR+IERRA+ KLR + L +Y Sbjct: 543 EWIRKIERRAMAKLRDQPNAEDLRYY 568 >gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana] Length = 291 Score = 343 bits (881), Expect = 5e-92 Identities = 171/266 (64%), Positives = 211/266 (79%), Gaps = 1/266 (0%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VA+ S WAAAAG+ +K L + LH+GWYCRDEL+KSTRSLVL+LARNYRGLG+A EDLI Sbjct: 23 GKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLI 82 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAG +GVLQGA RFDHTRGYKFSTYVQYWIRKS+S +V++HARGV IP +I + IN I+K Sbjct: 83 QAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQK 142 Query: 634 ARKTLSRSHG-KFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTP 458 ARKTL SHG K+ D EIAKLTG S +I A++CL+VVGSID+KVGDC + K LE TP Sbjct: 143 ARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTP 202 Query: 457 DKSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSK 278 D ++ SPE VMRQ ++ LLE L+P+EKQV+ R+GL+ ++ KSLEEIG+L VSK Sbjct: 203 DTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSK 262 Query: 277 EWIRRIERRALTKLRSTDCFQHLAHY 200 EWIR+IERRA+ KLR + L +Y Sbjct: 263 EWIRKIERRAMAKLRDQPNAEDLRYY 288 >ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum] gi|312281919|dbj|BAJ33825.1| unnamed protein product [Thellungiella halophila] gi|557104759|gb|ESQ45093.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum] Length = 562 Score = 335 bits (860), Expect = 1e-89 Identities = 166/266 (62%), Positives = 210/266 (78%), Gaps = 1/266 (0%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VA+ S WA AAG+ + L + LH+GWYCRDELLKSTRSLVL+L+RNYRGLG+A EDLI Sbjct: 294 GKVASMSCWAEAAGMNEILLMRNLHYGWYCRDELLKSTRSLVLFLSRNYRGLGIAHEDLI 353 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+GVLQGA RFDHTRGYKFSTYVQYWIRKS+S +V++HARGV IP ++ + ++QI+K Sbjct: 354 QAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVYIPSSVIRTMSQIQK 413 Query: 634 ARKTLSRSHG-KFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTP 458 ARKTL SHG K+P D EI+K TG S +I A++CL+VVGSID+KVGDC + K LE TP Sbjct: 414 ARKTLKTSHGIKYPADEEISKETGYSLKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTP 473 Query: 457 DKSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSK 278 D ++ SPE VMRQ ++ LL+ L+P+EKQV+ R+GL+ + KSLEEIG+L VSK Sbjct: 474 DTTMESPEEAVMRQSAWRDVHDLLQGLEPREKQVMVLRYGLQGFRPKSLEEIGKLLKVSK 533 Query: 277 EWIRRIERRALTKLRSTDCFQHLAHY 200 EWIR+IERRA+ KLR ++L Y Sbjct: 534 EWIRKIERRAMAKLRDQANAENLRFY 559 >emb|CAB83107.1| sigma factor 3 [Sinapis alba] Length = 567 Score = 334 bits (856), Expect = 4e-89 Identities = 166/266 (62%), Positives = 209/266 (78%), Gaps = 1/266 (0%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+VA+ S WA AAG+ QK L LHFGWYCRDEL+KSTRSLVL+LARNYRGLG+A EDLI Sbjct: 299 GKVASMSCWAEAAGMNQKLLMHNLHFGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLI 358 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAG +GVLQGA RFDHTRGYKFSTYV+YWIRKS+S +V++HARGV IP +I + ++QI+K Sbjct: 359 QAGYVGVLQGAERFDHTRGYKFSTYVRYWIRKSMSTMVSRHARGVHIPASIIRTMSQIQK 418 Query: 634 ARKTLSRSHG-KFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTP 458 ARKTL S G K+P D EI+KLTG S +I A++CL+VVGSID+KVGDC + + LE TP Sbjct: 419 ARKTLKTSQGIKYPADEEISKLTGYSLKKIRAANQCLKVVGSIDKKVGDCFTTRFLEFTP 478 Query: 457 DKSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSK 278 D ++ SPE VMRQ +++ LLE L+P+EKQV+ R+GL+ + KSLEEIG++ VSK Sbjct: 479 DPTMESPEEAVMRQSARGEVHNLLEGLEPREKQVMVLRYGLQDYSPKSLEEIGKILRVSK 538 Query: 277 EWIRRIERRALTKLRSTDCFQHLAHY 200 E IR+IERRA+ KLR +L +Y Sbjct: 539 EGIRKIERRAMAKLRDQPKADNLRYY 564 >emb|CAD20832.1| sigma factor [Spinacia oleracea] Length = 548 Score = 329 bits (844), Expect = 9e-88 Identities = 158/265 (59%), Positives = 208/265 (78%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+ + + WA AAG+++K LQ LHFGWYCRDELLKS RSLVLYL+R YRGLGVA EDL+ Sbjct: 282 GKAVSLNCWAEAAGIDEKVLQHDLHFGWYCRDELLKSGRSLVLYLSRYYRGLGVAHEDLM 341 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+G+LQGA RFDHTRGY+FSTYVQYWIRK++S+LV++H RG+++P T+ IN+++K Sbjct: 342 QAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVSRHGRGIKVPTTLSTTINRVQK 401 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK L RS GK PDD E++K TGLS +I A CLR+VGS+DQKVG I+ K LE TPD Sbjct: 402 ARKILKRSQGKHPDDVEVSKSTGLSLDKIKSADNCLRIVGSLDQKVGHFINMKYLECTPD 461 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 ++ PE TVM+Q + + ++ LL+ LDPKE++V+ R+GLE H SL E+G+++ VSKE Sbjct: 462 TALEMPEKTVMKQHMRNDVHKLLQELDPKERRVLIHRYGLEGH-CMSLHEVGKVFDVSKE 520 Query: 274 WIRRIERRALTKLRSTDCFQHLAHY 200 WIR++E+RALTKLR+ +L HY Sbjct: 521 WIRKMEKRALTKLRTEQNQTNLKHY 545 >ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa] gi|222854562|gb|EEE92109.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa] Length = 559 Score = 329 bits (843), Expect = 1e-87 Identities = 158/268 (58%), Positives = 209/268 (77%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 G+V + S WA A GL++K LQQ+L FGWYCRDEL+K+T SLVLY+ARNYRG+G+A EDLI Sbjct: 292 GQVVSLSCWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLI 351 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAGN+G+LQGA RFD TRGY+FSTYVQYWIRKS+ K+V +HARG++IP+ + + IN+I+K Sbjct: 352 QAGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQK 411 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 ARK LS SHG++PDD E+AK TGLS A+I A KCLRVV S+DQK+G+ AK E PD Sbjct: 412 ARKALSNSHGRYPDDWEVAKFTGLSLAKIESAQKCLRVVASLDQKIGEGHYAKYSEFIPD 471 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 SI +PE VMRQ + +++Y LL LD +EKQV+ R+G + +Q KSL EIGRL+ VSKE Sbjct: 472 MSIQNPEEAVMRQHMREEIYDLLRGLDSREKQVMVLRYGFKDNQPKSLAEIGRLFRVSKE 531 Query: 274 WIRRIERRALTKLRSTDCFQHLAHYSVV 191 +R+IE++ + KLR ++L+ Y ++ Sbjct: 532 RVRKIEKKIMIKLRDEGIRRNLSRYMIL 559 >ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda] gi|548857444|gb|ERN15250.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda] Length = 529 Score = 313 bits (803), Expect = 5e-83 Identities = 151/257 (58%), Positives = 202/257 (78%) Frame = -1 Query: 994 GRVATFSNWAAAAGLEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLI 815 GR A+FS WA AAG+ +K L+Q+LHFGW+CRD+LL+STR LV+YLA++YRG G+ FEDL+ Sbjct: 262 GRDASFSVWAEAAGINEKVLKQQLHFGWFCRDKLLRSTRPLVMYLAKSYRGRGIGFEDLL 321 Query: 814 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIRK 635 QAG++GVLQGA RFDHTRGY+FSTYVQYWIRKSLS LVA+H+RGV+IP + KV+NQ K Sbjct: 322 QAGSLGVLQGAERFDHTRGYRFSTYVQYWIRKSLSALVARHSRGVQIPMALNKVLNQTVK 381 Query: 634 ARKTLSRSHGKFPDDNEIAKLTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPD 455 A++ L + HG+ P + EIA+ TGLS + +A+KCLRV GSIDQ++GD A +E+T D Sbjct: 382 AKRALHQMHGRHPREVEIAEFTGLSLVNVRLANKCLRVHGSIDQRIGDNWGATYMEVTAD 441 Query: 454 KSITSPEATVMRQDIIDKMYALLESLDPKEKQVIYFRFGLETHQRKSLEEIGRLYGVSKE 275 I +PE VM+Q + + ++ +L +L P+EKQV+ R+GL + KSLEEIGRLY V+KE Sbjct: 442 TFIETPEKMVMKQHMREAIHEVLVNLHPREKQVLMLRYGLWDGRCKSLEEIGRLYNVTKE 501 Query: 274 WIRRIERRALTKLRSTD 224 WIR+IE+ AL K+R + Sbjct: 502 WIRKIEKMALEKVRKEE 518