BLASTX nr result

ID: Atropa21_contig00009553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00009553
         (497 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351128.1| PREDICTED: protein translocase subunit SECA2...    65   1e-08
ref|XP_004249845.1| PREDICTED: LOW QUALITY PROTEIN: protein tran...    63   5e-08
ref|XP_006434275.1| hypothetical protein CICLE_v10000294mg [Citr...    58   2e-06

>ref|XP_006351128.1| PREDICTED: protein translocase subunit SECA2, chloroplastic-like
           isoform X3 [Solanum tuberosum]
          Length = 1844

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -2

Query: 496 PLGSITCNSVVTALLYWQGKLFVGQADGVIKVYYSSVR 383
           PLGSITC+SVVTALL+WQGKLFVGQADGVIK   + VR
Sbjct: 819 PLGSITCDSVVTALLHWQGKLFVGQADGVIKETANEVR 856


>ref|XP_004249845.1| PREDICTED: LOW QUALITY PROTEIN: protein translocase subunit SECA2,
           chloroplastic-like [Solanum lycopersicum]
          Length = 1855

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 496 PLGSITCNSVVTALLYWQGKLFVGQADGVIKVYYSSVR 383
           PLGSITC+SVVTALL+W GKLFVGQADGVIK   + VR
Sbjct: 819 PLGSITCDSVVTALLHWHGKLFVGQADGVIKETANEVR 856


>ref|XP_006434275.1| hypothetical protein CICLE_v10000294mg [Citrus clementina]
           gi|557536397|gb|ESR47515.1| hypothetical protein
           CICLE_v10000294mg [Citrus clementina]
          Length = 821

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 496 PLGSITCNSVVTALLYWQGKLFVGQADGVIKVYY 395
           P G+I C SV+TALLYWQGKLFVG AD  +KVYY
Sbjct: 785 PTGAIPCGSVITALLYWQGKLFVGCADRTVKVYY 818


Top