BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00009443
         (947 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra...   497   e-138
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra...   489   e-136
gb|EOY02124.1| Phytochrome and flowering time regulatory protein...   393   e-107
gb|EOY02123.1| Phytochrome and flowering time regulatory protein...   393   e-107
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   390   e-106
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   384   e-104
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              382   e-103
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259...   382   e-103
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu...   381   e-103
ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II tra...   375   e-101
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot...   356   6e-96
gb|EPS74095.1| hypothetical protein M569_00660, partial [Genlise...   355   1e-95
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra...   354   3e-95
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra...   354   3e-95
gb|AGM20684.1| PFT [Populus tomentosa]                                347   3e-93
ref|XP_006306776.1| hypothetical protein CARUB_v10008315mg [Caps...   342   2e-91
ref|XP_002890684.1| hypothetical protein ARALYDRAFT_472815 [Arab...   339   1e-90
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra...   335   1e-89
ref|NP_173925.3| mediator of RNA polymerase II transcription sub...   330   4e-88
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra...   325   2e-86

>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Solanum tuberosum]
          Length = 819

 Score =  497 bits (1280), Expect = e-138
 Identities = 252/315 (80%), Positives = 261/315 (82%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVEGTAALGPYWKTIVSDYLDKIIRCFFG +STSQK +AA+VEVS+VMFN HG YSAC
Sbjct: 6   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSLVMFNTHGSYSAC 65

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFTSQNGNQSQQNMEGKK 362
           LVQRSGWTRDMDTF QWLSAIPF GGGFND            MF+  NGNQSQQNMEGKK
Sbjct: 66  LVQRSGWTRDMDTFLQWLSAIPFLGGGFNDAAVAEGLAEALVMFSGLNGNQSQQNMEGKK 125

Query: 363 HCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVIC 542
           HC+LISGSNPY LPTPVYRP+MQKLEQNENIE Q DSRLSDAETVAKAFPQCSISLSV+C
Sbjct: 126 HCILISGSNPYPLPTPVYRPQMQKLEQNENIEAQTDSRLSDAETVAKAFPQCSISLSVLC 185

Query: 543 PKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASNQ 722
           PKKLPKLRAIYDAGKHNPRAAD PIDT KNPNFLVLISENFIEARAAFSRSG+TNLASN 
Sbjct: 186 PKKLPKLRAIYDAGKHNPRAADPPIDTAKNPNFLVLISENFIEARAAFSRSGMTNLASNH 245

Query: 723 SPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMTGPA 902
           SPVKMD                          RPPISAGNIPPATVKIEP TVTSMTGPA
Sbjct: 246 SPVKMD--VSSVLPVSGTQSISNSAANVSVMSRPPISAGNIPPATVKIEPNTVTSMTGPA 303

Query: 903 FSHIPSVHPALQPVP 947
           FSHIPSV PALQPVP
Sbjct: 304 FSHIPSVRPALQPVP 318


>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Solanum lycopersicum]
          Length = 805

 Score =  489 bits (1260), Expect = e-136
 Identities = 247/315 (78%), Positives = 257/315 (81%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVEGTA LGPYWK IVSDYLDKIIRCFFG +STSQK +AA+VEVSMVMFN HGPYSAC
Sbjct: 6   IVAVEGTAVLGPYWKIIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSMVMFNTHGPYSAC 65

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFTSQNGNQSQQNMEGKK 362
           LVQRSGWT+DMDTF QWLSAIPFSGGGFND            MF+  NGNQ+QQ MEGKK
Sbjct: 66  LVQRSGWTKDMDTFLQWLSAIPFSGGGFNDAAVAEGLAEALVMFSVPNGNQTQQKMEGKK 125

Query: 363 HCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVIC 542
           HC+LISGSNPY LPTPVYRP+MQKLEQNENIE Q DSRL+DAETVAK FPQCSISLSVIC
Sbjct: 126 HCILISGSNPYPLPTPVYRPQMQKLEQNENIEAQTDSRLADAETVAKTFPQCSISLSVIC 185

Query: 543 PKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASNQ 722
           PKKLPKLRAIYDAGKHNPRAAD PIDT KNPNFLVLISENFIEARAAFSRSG+TNLASN 
Sbjct: 186 PKKLPKLRAIYDAGKHNPRAADPPIDTAKNPNFLVLISENFIEARAAFSRSGLTNLASNH 245

Query: 723 SPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMTGPA 902
           SPVKMD                          RPPISAGNIPPATVKIEP TVT MTGP 
Sbjct: 246 SPVKMD--VSSVLPVSGTQSISNSAANVSVISRPPISAGNIPPATVKIEPNTVTPMTGPG 303

Query: 903 FSHIPSVHPALQPVP 947
           FSHIPSV PALQPVP
Sbjct: 304 FSHIPSVRPALQPVP 318


>gb|EOY02124.1| Phytochrome and flowering time regulatory protein isoform 2
           [Theobroma cacao]
          Length = 860

 Score =  393 bits (1009), Expect = e-107
 Identities = 196/315 (62%), Positives = 233/315 (73%), Gaps = 2/315 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVEGTAA+GPYW+T+VSDYLDKIIRCF  +E T QK + +NVE+++V FN HG Y AC
Sbjct: 7   IVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTHGSYCAC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFT-SQNGNQSQQNMEGK 359
           LVQRSGWT+D+D F QWLSAIPFSGGGFND            MF  + NGNQ+QQN++G+
Sbjct: 67  LVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQQNVDGQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           +HC+L++ SNPY LPTPVYRP++Q LEQ ENIE Q +SRLSDAETVAK+F QCS+SLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCSVSLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+L KL+ IY AGK NPRA D P+D  +NP FLVLISENF+E RAA SR GV +LASN
Sbjct: 187 CPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGVPSLASN 246

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
           QSPVKMD                          R P+S GN+P AT+K+EPTT+TSM TG
Sbjct: 247 QSPVKMD-------------MASVTSVNGSMMSRQPVSVGNVPTATIKVEPTTITSMGTG 293

Query: 897 PAFSHIPSVHPALQP 941
           PAF HIP+V  A  P
Sbjct: 294 PAFPHIPAVPRAPSP 308


>gb|EOY02123.1| Phytochrome and flowering time regulatory protein isoform 1
           [Theobroma cacao]
          Length = 871

 Score =  393 bits (1009), Expect = e-107
 Identities = 196/315 (62%), Positives = 233/315 (73%), Gaps = 2/315 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVEGTAA+GPYW+T+VSDYLDKIIRCF  +E T QK + +NVE+++V FN HG Y AC
Sbjct: 7   IVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTHGSYCAC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFT-SQNGNQSQQNMEGK 359
           LVQRSGWT+D+D F QWLSAIPFSGGGFND            MF  + NGNQ+QQN++G+
Sbjct: 67  LVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQQNVDGQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           +HC+L++ SNPY LPTPVYRP++Q LEQ ENIE Q +SRLSDAETVAK+F QCS+SLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCSVSLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+L KL+ IY AGK NPRA D P+D  +NP FLVLISENF+E RAA SR GV +LASN
Sbjct: 187 CPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGVPSLASN 246

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
           QSPVKMD                          R P+S GN+P AT+K+EPTT+TSM TG
Sbjct: 247 QSPVKMD--MASVTSGTGPPPTSVPSVNGSMMSRQPVSVGNVPTATIKVEPTTITSMGTG 304

Query: 897 PAFSHIPSVHPALQP 941
           PAF HIP+V  A  P
Sbjct: 305 PAFPHIPAVPRAPSP 319


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
           gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
           hypothetical protein CICLE_v10030710mg [Citrus
           clementina]
          Length = 830

 Score =  390 bits (1003), Expect = e-106
 Identities = 199/318 (62%), Positives = 237/318 (74%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVEGTAA+GPYW++IVSDYL+KIIRCF   E   QK +A+NVE+S+V FN HG Y AC
Sbjct: 7   IVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCAC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFT-SQNGNQSQQNMEGK 359
           LVQRSGWT+D+D F  WLS IPF+GGGFND            MF+ + NG+Q+QQN++G+
Sbjct: 67  LVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           +HC+L++ SNP+ LPTPVYRP+MQ L+QNEN E Q +SRLSDAETVAK+F QCS+SLSVI
Sbjct: 127 RHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKL AIY+A K NPRAAD P+D +KNP+FLVLISENF+EARAA SR GV NLA N
Sbjct: 187 CPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVANLAPN 246

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
           Q+PVKMD                          RPPIS GN+P ATVK+EP+TVTSM  G
Sbjct: 247 QNPVKMD----IAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTATVKVEPSTVTSMVNG 302

Query: 897 PAFSHIPSV-HPALQPVP 947
           P F HIPSV  PA Q VP
Sbjct: 303 PTFPHIPSVSRPASQGVP 320


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  384 bits (986), Expect = e-104
 Identities = 198/318 (62%), Positives = 236/318 (74%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVEGTAA+GPYW++IVSDYL+KIIRCF   E   Q  +A+NVE+S+V FN HG Y AC
Sbjct: 7   IVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQT-SASNVELSLVTFNTHGSYCAC 65

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFT-SQNGNQSQQNMEGK 359
           LVQRSGWT+D+D F  WLS IPF+GGGFND            MF+ + NG+Q+QQN++G+
Sbjct: 66  LVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQ 125

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           +HC+L++ SNP+ LPTPVYRP+MQ L+QNEN E Q +SRLSDAETVAK+F QCS+SLSVI
Sbjct: 126 RHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVI 185

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKL AIY+A K NPRAAD P+D +KNP+FLVLISENF+EARAA SR GV NLA N
Sbjct: 186 CPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVANLAPN 245

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
           Q+PVKMD                          RPPIS GN+P ATVK+EP+TVTSM  G
Sbjct: 246 QNPVKMD----IAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTATVKVEPSTVTSMVNG 301

Query: 897 PAFSHIPSV-HPALQPVP 947
           P F HIPSV  PA Q VP
Sbjct: 302 PTFPHIPSVSRPASQGVP 319


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  382 bits (980), Expect = e-103
 Identities = 189/318 (59%), Positives = 239/318 (75%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           +VAVEGTAA+GPYW+ +VSDYLDKIIR F G E   QKP+++N E+S+VMFNAHG Y +C
Sbjct: 7   VVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAHGSYCSC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFT-SQNGNQSQQNMEGK 359
           LVQRSGWTRD+D F QWLSA+PF+GGGFND            MF+ + NG+Q+QQN++G+
Sbjct: 67  LVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQQNVDGQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           +HC+L++ +NPY LPTPVY+P+MQ +EQNE+IE Q +SRLSDAE VAK+F QCS+SLSVI
Sbjct: 127 RHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCSVSLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKL++IY+AGK NPR AD P+D  KNP+FLVLIS++F+EARAA SR G++N+ +N
Sbjct: 187 CPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGLSNMTAN 246

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMT-G 896
           QSPVKMD                          RP I+ G +P ATVK+EP+TVTS+T G
Sbjct: 247 QSPVKMD---IASVPQVSAAPPASIPSVNGIMNRPTIAVGAVPTATVKVEPSTVTSITSG 303

Query: 897 PAFSHIPSV-HPALQPVP 947
           P F HIPSV   A Q VP
Sbjct: 304 PGFPHIPSVPRAASQGVP 321


>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
          Length = 827

 Score =  382 bits (980), Expect = e-103
 Identities = 189/318 (59%), Positives = 239/318 (75%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           +VAVEGTAA+GPYW+ +VSDYLDKIIR F G E   QKP+++N E+S+VMFNAHG Y +C
Sbjct: 7   VVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAHGSYCSC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFT-SQNGNQSQQNMEGK 359
           LVQRSGWTRD+D F QWLSA+PF+GGGFND            MF+ + NG+Q+QQN++G+
Sbjct: 67  LVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQQNVDGQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           +HC+L++ +NPY LPTPVY+P+MQ +EQNE+IE Q +SRLSDAE VAK+F QCS+SLSVI
Sbjct: 127 RHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCSVSLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKL++IY+AGK NPR AD P+D  KNP+FLVLIS++F+EARAA SR G++N+ +N
Sbjct: 187 CPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGLSNMTAN 246

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMT-G 896
           QSPVKMD                          RP I+ G +P ATVK+EP+TVTS+T G
Sbjct: 247 QSPVKMD---IASVPQVSAAPPASIPSVNGIMNRPTIAVGAVPTATVKVEPSTVTSITSG 303

Query: 897 PAFSHIPSV-HPALQPVP 947
           P F HIPSV   A Q VP
Sbjct: 304 PGFPHIPSVPRAASQGVP 321


>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
           gi|550332870|gb|EEE88812.2| hypothetical protein
           POPTR_0008s11650g [Populus trichocarpa]
          Length = 896

 Score =  381 bits (978), Expect = e-103
 Identities = 194/318 (61%), Positives = 235/318 (73%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVEGTAA+GP+W  IVSDYL+KIIRC+ G E++ QKP  ++ E+S+V FN+HG YSAC
Sbjct: 7   IVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNETSGQKPPTSSAELSLVTFNSHGSYSAC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFT-SQNGNQSQQNMEGK 359
           LVQRSGWTRD+D F  WLSAIPF+GGGFND            MF  + NGNQ+Q N +G+
Sbjct: 67  LVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPITPNGNQTQPNTDGQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           ++C+LI+ SNP+ LPTPVYRP++Q LEQ ENI+ Q +SRLSDAETVAK+FPQCS+SLSVI
Sbjct: 127 RNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCSVSLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKLR IY+AGK N RAAD P+D  KNP+FLVLISENF+EARAA SR G T+L SN
Sbjct: 187 CPKQLPKLRLIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGATSLPSN 246

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
           Q+PVK+D                          RPPIS GN+P ATVK+EP+T+TSM  G
Sbjct: 247 QTPVKVD--IASVTSVTGPLPASIPSVNGSITNRPPISVGNLPTATVKVEPSTITSMANG 304

Query: 897 PAFSHIPSV-HPALQPVP 947
            AF HI SV  P+ Q VP
Sbjct: 305 SAFPHITSVPRPSSQGVP 322


>ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Fragaria vesca subsp. vesca]
          Length = 855

 Score =  375 bits (963), Expect = e-101
 Identities = 188/317 (59%), Positives = 228/317 (71%), Gaps = 2/317 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IV VEGTAA+GPYW  +VSDY++K+IR   G E + QKP+++ VE+S+V FN HG YS C
Sbjct: 7   IVVVEGTAAMGPYWPAVVSDYVEKVIRSLSGNELSGQKPSSSTVEMSLVTFNTHGSYSGC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMF-TSQNGNQSQQNMEGK 359
           LVQR+GWTRD++ F QWLSAIP +GGGF+D            MF T QNG Q+QQN++ +
Sbjct: 67  LVQRTGWTRDIELFLQWLSAIPLAGGGFSDAAIAEGLSEALMMFPTIQNGGQNQQNVDFQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           KHC+L++ SNP+ LPTPVYRP+MQ +EQ+EN + Q +SRL DAE VAK+FPQCS+SLSVI
Sbjct: 127 KHCILVAASNPHPLPTPVYRPQMQNVEQSENFDAQTESRLYDAEAVAKSFPQCSVSLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKLRAIY+AGK NPRA D PID  KNP+FLVLISENFIEARA  SR G T L S 
Sbjct: 187 CPKQLPKLRAIYNAGKRNPRAEDPPIDNVKNPHFLVLISENFIEARATLSRPGSTTLPSI 246

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
            SPVKMD                          RP  S GN+PPATVK+EP+TV+SM  G
Sbjct: 247 PSPVKMD--IAPVASVTGPPPTSMPSVNGSVMNRPSFSVGNVPPATVKVEPSTVSSMVAG 304

Query: 897 PAFSHIPSVHPALQPVP 947
           PAF+H+PSV P  Q VP
Sbjct: 305 PAFAHVPSVRPPSQGVP 321


>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus
           trichocarpa] gi|222864996|gb|EEF02127.1| PHYTOCHROME AND
           FLOWERING TIME 1 family protein [Populus trichocarpa]
          Length = 796

 Score =  356 bits (914), Expect = 6e-96
 Identities = 188/318 (59%), Positives = 228/318 (71%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVEGTAA+GP+W  IVSDYL+KIIR          K   + VE+S+V FN+HG YSAC
Sbjct: 7   IVAVEGTAAMGPFWSIIVSDYLEKIIR---------YKVPTSIVELSIVTFNSHGSYSAC 57

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFT-SQNGNQSQQNMEGK 359
           LVQRSGWTRD+D F QWLSAIPF+GGGFND            MF    NG+Q+Q N++ +
Sbjct: 58  LVQRSGWTRDVDIFLQWLSAIPFAGGGFNDAAIAEGLSEALMMFPIDPNGSQTQSNIDEQ 117

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           ++C+LI+ SNP+ LPTPVYRP++Q LEQ ENI+ Q +SRLSDAETVAK+FPQCS+SLS+I
Sbjct: 118 RNCILIAASNPHPLPTPVYRPQIQNLEQIENIDAQNESRLSDAETVAKSFPQCSVSLSII 177

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKLR+IY+AGK N RAAD P+D+ KNP+FLVLISENF+EARAA S  GVT+L SN
Sbjct: 178 CPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVLISENFMEARAALSLPGVTSLTSN 237

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
           Q+PVK+D                          RP IS GN+P ATVK+EP+T+TSM  G
Sbjct: 238 QTPVKVD--IASVTSVTGPAPTSIPSVNGSITNRPTISVGNVPTATVKVEPSTITSMANG 295

Query: 897 PAFSHIPSV-HPALQPVP 947
           P F H PSV  PA Q VP
Sbjct: 296 PTFPHNPSVPRPASQGVP 313


>gb|EPS74095.1| hypothetical protein M569_00660, partial [Genlisea aurea]
          Length = 527

 Score =  355 bits (911), Expect = 1e-95
 Identities = 182/310 (58%), Positives = 223/310 (71%), Gaps = 1/310 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           I+AVEGTA+LGP+WKTI+SDYLDKIIR   G+E   QKP   +VE+S+VMFNAHGPYSA 
Sbjct: 7   IIAVEGTASLGPFWKTILSDYLDKIIRFLCGSEPVGQKPPNTHVELSLVMFNAHGPYSAF 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFTSQNGNQSQQNMEGKK 362
           LVQRSGWT+DMD +FQWLSAIPFSGGGFND            MF+S NGNQ+ QN E ++
Sbjct: 67  LVQRSGWTKDMDLYFQWLSAIPFSGGGFNDAAITEGLSEVLMMFSSPNGNQN-QNAEVQR 125

Query: 363 HCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVIC 542
           HC+L+S SNPY LPTPVYRP+M + E+ EN+E Q ++ LSDAET+AK+FPQC ISLSVIC
Sbjct: 126 HCILVSASNPYPLPTPVYRPQMNQ-EKTENVESQAENHLSDAETLAKSFPQCGISLSVIC 184

Query: 543 PKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASNQ 722
           PK+LPKLR IY+AGK NPRA D P++  KNP+FLVLISENF+EA     +SG+  L S Q
Sbjct: 185 PKQLPKLRGIYNAGKQNPRAGDPPVENAKNPSFLVLISENFMEA----VQSGIAALPSYQ 240

Query: 723 SPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMTGPA 902
           +PVK D                          RPP+S+GN+ PATVK+EPTT+ SM G +
Sbjct: 241 NPVKTD--APSVPPISGAPPTSAIPAKGPILVRPPVSSGNVLPATVKVEPTTIPSMPGSS 298

Query: 903 -FSHIPSVHP 929
            F H+ +  P
Sbjct: 299 TFPHLSTAAP 308


>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like, partial [Cucumis sativus]
          Length = 595

 Score =  354 bits (908), Expect = 3e-95
 Identities = 187/319 (58%), Positives = 225/319 (70%), Gaps = 4/319 (1%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IV VEGTAA+GP+W+T+VSDY++KI+R F G E T QKP  +NVE S+V F+ HG Y  C
Sbjct: 7   IVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTHGSYCGC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFTSQ-NGNQSQQNMEGK 359
           LVQR+GWTRD+D F QWLSAIPFSGGGF+D            MF +Q NG Q+QQ M+ +
Sbjct: 67  LVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQQTMDMQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           KHC+L++ SNPY LPTPVYRP +Q LEQ++N+E  P S  S AETVAK+FPQC ISLSVI
Sbjct: 127 KHCILVAASNPYPLPTPVYRPAVQNLEQHDNVE--PGSSQSYAETVAKSFPQCFISLSVI 184

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKL+AIY AGK NPRAAD PID  K+P++LVLISENF+EARAA SR G+T+L +N
Sbjct: 185 CPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGITSLPAN 244

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMT-G 896
           QSPVKMD                          R P+S  N P ATVK+EP TVTSMT G
Sbjct: 245 QSPVKMD--ISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVKVEPNTVTSMTNG 302

Query: 897 PAF-SHIPS-VHPALQPVP 947
             +  H+PS V  A Q VP
Sbjct: 303 SGYPPHMPSVVRAASQGVP 321


>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Cucumis sativus]
          Length = 858

 Score =  354 bits (908), Expect = 3e-95
 Identities = 187/319 (58%), Positives = 225/319 (70%), Gaps = 4/319 (1%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IV VEGTAA+GP+W+T+VSDY++KI+R F G E T QKP  +NVE S+V F+ HG Y  C
Sbjct: 7   IVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTHGSYCGC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFTSQ-NGNQSQQNMEGK 359
           LVQR+GWTRD+D F QWLSAIPFSGGGF+D            MF +Q NG Q+QQ M+ +
Sbjct: 67  LVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQQTMDMQ 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           KHC+L++ SNPY LPTPVYRP +Q LEQ++N+E  P S  S AETVAK+FPQC ISLSVI
Sbjct: 127 KHCILVAASNPYPLPTPVYRPAVQNLEQHDNVE--PGSSQSYAETVAKSFPQCFISLSVI 184

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPKL+AIY AGK NPRAAD PID  K+P++LVLISENF+EARAA SR G+T+L +N
Sbjct: 185 CPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGITSLPAN 244

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMT-G 896
           QSPVKMD                          R P+S  N P ATVK+EP TVTSMT G
Sbjct: 245 QSPVKMD--ISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVKVEPNTVTSMTNG 302

Query: 897 PAF-SHIPS-VHPALQPVP 947
             +  H+PS V  A Q VP
Sbjct: 303 SGYPPHMPSVVRAASQGVP 321


>gb|AGM20684.1| PFT [Populus tomentosa]
          Length = 889

 Score =  347 bits (891), Expect = 3e-93
 Identities = 189/346 (54%), Positives = 230/346 (66%), Gaps = 31/346 (8%)
 Frame = +3

Query: 3    IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQ---------------KPTAANVE 137
            IVAVEGTAA+GP+W  IVSDYL+KIIRC+ G E   Q               K   + VE
Sbjct: 7    IVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNELLGQILLTIVLCLSSVQIQKVPTSIVE 66

Query: 138  VSMVMFNAHGPYS-------ACLVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXX 296
            +S+V FN+HG YS       ACLVQRSGWTRD+D F QWLSAIPF+GGGFND        
Sbjct: 67   LSIVTFNSHGSYSEYPLLCEACLVQRSGWTRDVDIFLQWLSAIPFAGGGFNDAAIGEGLS 126

Query: 297  XXXXMFT-SQNGNQSQQNMEGKKHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDS 473
                MF    NG+Q+Q N++ +++C+L + SNP+ LPTPVYRP++Q  EQ ENI+ Q +S
Sbjct: 127  EALMMFPIDPNGSQTQSNIDEQRNCILFAASNPHPLPTPVYRPQIQNSEQIENIDAQNES 186

Query: 474  RLSDAETVAKAFPQCSISLSVICPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLI 653
            RLSDAE VAK+FPQCS+SLS+ICPK+LPKLR+IY+AGK N RAAD P+D+ KNP+FLVLI
Sbjct: 187  RLSDAERVAKSFPQCSVSLSIICPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVLI 246

Query: 654  SENFIEARAAFSRSGVTNLASNQSPVKMD------XXXXXXXXXXXXXXXXXXXXXXXXX 815
            SENF+EARAA S  GVT+L SNQ+PVK+D                               
Sbjct: 247  SENFLEARAALSLPGVTSLTSNQTPVKVDIASVTSVTGPAPTSIPSDLLSFKTSVNGSIT 306

Query: 816  XRPPISAGNIPPATVKIEPTTVTSM-TGPAFSHIPSV-HPALQPVP 947
             RP IS GN+P ATVK+EP+T+TSM  GP F H PSV  PA Q VP
Sbjct: 307  NRPTISVGNVPTATVKVEPSTITSMANGPTFPHNPSVPRPASQGVP 352


>ref|XP_006306776.1| hypothetical protein CARUB_v10008315mg [Capsella rubella]
           gi|482575487|gb|EOA39674.1| hypothetical protein
           CARUB_v10008315mg [Capsella rubella]
          Length = 827

 Score =  342 bits (876), Expect = 2e-91
 Identities = 178/318 (55%), Positives = 220/318 (69%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IV  EGTAALGPYW+TIVSDYLDKIIR F G E   ++   + VE+S+V+FN+HG Y AC
Sbjct: 10  IVVAEGTAALGPYWQTIVSDYLDKIIRSFCGTELNGERNPVSTVELSLVIFNSHGSYCAC 69

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFTSQNGNQSQQNMEGKK 362
           LVQRSGWTRD+D F  WLS+I F GGGFN+            MF   +G Q+Q + + K+
Sbjct: 70  LVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFPPPSG-QAQPSSDLKR 128

Query: 363 HCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVIC 542
           HC+LI+ SNP+ LPTPVYRP++Q +E+NEN + Q +SRLSDAETVA  F +CS+SLSV+C
Sbjct: 129 HCILITASNPHTLPTPVYRPRLQNVERNENGDTQSESRLSDAETVASYFAKCSVSLSVVC 188

Query: 543 PKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASNQ 722
           PK+LPK+RA+Y+AGK NP++ DL IDT KNP +LVLISENF+EARAA S S  TNL   Q
Sbjct: 189 PKQLPKIRALYNAGKLNPQSVDLSIDTVKNPFYLVLISENFVEARAALSHS-ATNLPQTQ 247

Query: 723 SPVKMD-XXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMTG- 896
           SPVKMD                           R P+S G +P ATVK+EP+TVTSM   
Sbjct: 248 SPVKMDRATVAPSLPVTGQPPAPVTSANGPILNRQPVSVGPVPTATVKVEPSTVTSMAPV 307

Query: 897 PAFSHIPSV-HPALQPVP 947
           P+F HIPSV  PA Q +P
Sbjct: 308 PSFPHIPSVARPATQAIP 325


>ref|XP_002890684.1| hypothetical protein ARALYDRAFT_472815 [Arabidopsis lyrata subsp.
           lyrata] gi|297336526|gb|EFH66943.1| hypothetical protein
           ARALYDRAFT_472815 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  339 bits (869), Expect = 1e-90
 Identities = 176/318 (55%), Positives = 222/318 (69%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IV  EGTAALGPYW+TIVSDYL+KIIR F G+E   ++   + VE+S+V+FN+HG Y AC
Sbjct: 9   IVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSYCAC 68

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFTSQNGNQSQQNMEGKK 362
           LVQRSGWTRD+D F  WLS+I F GGGFN+            MF+  +G Q+Q + + K+
Sbjct: 69  LVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSG-QAQPSNDLKR 127

Query: 363 HCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVIC 542
           HC+LI+ SNP+ LPTPV+RP++Q +E+NEN + Q +SRLSDAETVA  F +CS+SLSV+C
Sbjct: 128 HCILITASNPHTLPTPVFRPRLQSVERNENGDAQAESRLSDAETVASYFAKCSVSLSVVC 187

Query: 543 PKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASNQ 722
           PK+LPK+RA+Y+AGK NP++ADL IDT KN  +LVLISENF+EARAA S S  TNL   Q
Sbjct: 188 PKQLPKIRALYNAGKLNPQSADLSIDTAKNTFYLVLISENFVEARAALSHS-ATNLPQTQ 246

Query: 723 SPVKMD-XXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMTG- 896
           SPVK+D                           R P+S G +P ATVK+EP+TVTSM   
Sbjct: 247 SPVKVDRATVAPSLPVTGQPPAPVTSANGPIQNRQPVSVGPVPTATVKVEPSTVTSMAPV 306

Query: 897 PAFSHIPSV-HPALQPVP 947
           P F HIPSV  PA QP+P
Sbjct: 307 PNFPHIPSVARPATQPIP 324


>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Glycine max]
          Length = 877

 Score =  335 bits (860), Expect = 1e-89
 Identities = 176/309 (56%), Positives = 216/309 (69%), Gaps = 2/309 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVE TAA+GPYW TI+ DYLDK+IRCF G +ST QK +A+NVE ++V +N HG YS+C
Sbjct: 7   IVAVESTAAMGPYWNTILMDYLDKMIRCFGGNDSTGQKFSASNVEFALVTYNTHGCYSSC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXM-FTSQNGNQSQQNMEGK 359
           LVQRSGWTRD D FF WLS+IPF+GGGFND            M + SQ+G  +QQ+++  
Sbjct: 67  LVQRSGWTRDPDVFFSWLSSIPFNGGGFNDAAIAEGLSEALMMLWNSQSGAPNQQSVDMH 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           KHC+L++ SNPY L TPVY P+ Q LEQ+E I+    S L DAE VAKAFPQ SISLSVI
Sbjct: 127 KHCILVAASNPYPLQTPVYVPRPQNLEQSETIDSDSGSHLYDAEAVAKAFPQFSISLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPK+++IY+AGK N RAAD P++  K P+FL+LISE F EAR A SRSG+T+L SN
Sbjct: 187 CPKQLPKIKSIYNAGKRNNRAADPPLE-AKTPHFLILISEGFREARGALSRSGITSLPSN 245

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
           QSPVK+D                          R P+ AGN+ PATVK+EP  VTSM +G
Sbjct: 246 QSPVKVD---AVSVTPVTGAPPTSMPVNGSIPNRQPVPAGNVAPATVKVEPVPVTSMVSG 302

Query: 897 PAFSHIPSV 923
           PAF H  SV
Sbjct: 303 PAFPHNSSV 311


>ref|NP_173925.3| mediator of RNA polymerase II transcription subunit 25 [Arabidopsis
           thaliana] gi|75145501|sp|Q7XYY2.1|MED25_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           25; Short=AtMED25; AltName: Full=Phytochrome and
           flowering time 1 protein; AltName: Full=Phytochrome and
           flowering time regulatory protein 1
           gi|32478899|gb|AAO39425.1| phytochrome and flowering
           time 1 protein [Arabidopsis thaliana]
           gi|332192518|gb|AEE30639.1| mediator of RNA polymerase
           II transcription subunit 25 [Arabidopsis thaliana]
          Length = 836

 Score =  330 bits (847), Expect = 4e-88
 Identities = 172/318 (54%), Positives = 220/318 (69%), Gaps = 3/318 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IV  EGTAALGPYW+TIVSDYL+KIIR F G+E   ++   + VE+S+V+FN+HG Y AC
Sbjct: 9   IVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSYCAC 68

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXMFTSQNGNQSQQNMEGKK 362
           LVQRSGWTRD+D F  WLS+I F GGGFN+            MF+  +G Q+Q + + K+
Sbjct: 69  LVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSG-QAQPSNDLKR 127

Query: 363 HCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVIC 542
           HC+LI+ SNP++LPTPVYRP++Q +E+NEN + Q +SRLSDAETVA  F +CS+SLSV+C
Sbjct: 128 HCILITASNPHILPTPVYRPRLQNVERNENGDAQAESRLSDAETVASYFAKCSVSLSVVC 187

Query: 543 PKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASNQ 722
           PK+LP +RA+Y+AGK N ++ADL IDT KN  +LVLISENF+EA AA S S  TNL   Q
Sbjct: 188 PKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLISENFVEACAALSHS-ATNLPQTQ 246

Query: 723 SPVKMD-XXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSMTG- 896
           SPVK+D                           R P+S G +P ATVK+EP+TVTSM   
Sbjct: 247 SPVKVDRATVAPSIPVTGQPPAPVSSANGPIQNRQPVSVGPVPTATVKVEPSTVTSMAPV 306

Query: 897 PAFSHIPSV-HPALQPVP 947
           P+F HIP+V  PA Q +P
Sbjct: 307 PSFPHIPAVARPATQAIP 324


>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X1 [Glycine max]
           gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X2 [Glycine max]
          Length = 832

 Score =  325 bits (833), Expect = 2e-86
 Identities = 173/309 (55%), Positives = 212/309 (68%), Gaps = 2/309 (0%)
 Frame = +3

Query: 3   IVAVEGTAALGPYWKTIVSDYLDKIIRCFFGAESTSQKPTAANVEVSMVMFNAHGPYSAC 182
           IVAVE TAA+GPYW TI+ DYLDK+IRCF G +ST QK +A+ VE ++V +N HG YS+C
Sbjct: 7   IVAVESTAAMGPYWDTILMDYLDKMIRCFGGNDSTGQKSSASIVEFALVTYNTHGCYSSC 66

Query: 183 LVQRSGWTRDMDTFFQWLSAIPFSGGGFNDXXXXXXXXXXXXM-FTSQNGNQSQQNMEGK 359
           LVQRSGWTRD D FF WLS+IPF+GGGFND            M + SQ+G  +QQ+++  
Sbjct: 67  LVQRSGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMLWISQSGAPNQQSVDMH 126

Query: 360 KHCVLISGSNPYLLPTPVYRPKMQKLEQNENIEGQPDSRLSDAETVAKAFPQCSISLSVI 539
           KHC+L++ SNPY L TPVY P+ Q LEQ+E I+    S L DAE VAKAFPQ SISLSVI
Sbjct: 127 KHCILVAASNPYPLQTPVYVPRPQNLEQSETIDLDSGSHLYDAEAVAKAFPQFSISLSVI 186

Query: 540 CPKKLPKLRAIYDAGKHNPRAADLPIDTTKNPNFLVLISENFIEARAAFSRSGVTNLASN 719
           CPK+LPK++ IY+AGK N RAAD P++  K P+FL+LISE F EA  A SRSG+T+L SN
Sbjct: 187 CPKQLPKIKTIYNAGKRNNRAADSPLE-AKTPHFLILISEGFREAWGALSRSGITSLPSN 245

Query: 720 QSPVKMDXXXXXXXXXXXXXXXXXXXXXXXXXXRPPISAGNIPPATVKIEPTTVTSM-TG 896
           QSPVK+D                          R P+ AGN+ PATVK+EP  V SM +G
Sbjct: 246 QSPVKVD---AVSVTPVTEAPPTSMPVNGSIPNRQPVPAGNVAPATVKVEPVLVASMVSG 302

Query: 897 PAFSHIPSV 923
           PAF H  SV
Sbjct: 303 PAFPHNSSV 311