BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00009336
         (616 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containi...   393   e-107
ref|XP_004237750.1| PREDICTED: pentatricopeptide repeat-containi...   378   e-103
gb|EMJ01470.1| hypothetical protein PRUPE_ppa014901mg [Prunus pe...   275   6e-72
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   275   7e-72
ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi...   273   3e-71
ref|XP_002520264.1| pentatricopeptide repeat-containing protein,...   273   3e-71
ref|XP_002306667.1| pentatricopeptide repeat-containing family p...   271   1e-70
gb|EOY16505.1| Tetratricopeptide repeat-like superfamily protein...   269   4e-70
ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containi...   258   1e-66
ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containi...   255   6e-66
gb|EXB37670.1| hypothetical protein L484_021877 [Morus notabilis]     255   8e-66
ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containi...   254   1e-65
ref|XP_004292628.1| PREDICTED: pentatricopeptide repeat-containi...   253   3e-65
ref|XP_006472888.1| PREDICTED: pentatricopeptide repeat-containi...   240   3e-61
ref|XP_006434328.1| hypothetical protein CICLE_v10000854mg [Citr...   240   3e-61
ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containi...   229   6e-58
ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containi...   228   8e-58
ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutr...   227   2e-57
sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-c...   222   7e-56
ref|NP_175064.2| pentatricopeptide repeat-containing protein [Ar...   222   7e-56

>ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Solanum tuberosum]
          Length = 644

 Score =  393 bits (1009), Expect = e-107
 Identities = 193/204 (94%), Positives = 200/204 (98%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           SGYT+SIL+S+VEFAFHGKEIHGNMLRNGVDLSNVVVGN+LIDMYGKLG+VDYATGVFLA
Sbjct: 160 SGYTYSILVSHVEFAFHGKEIHGNMLRNGVDLSNVVVGNSLIDMYGKLGIVDYATGVFLA 219

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG
Sbjct: 220 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 279

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQILC C+KMGFLCN IVSSAAIDLFSNCNRIE SARIFKDSNIWDTALCNSMISSYALN
Sbjct: 280 KQILCLCVKMGFLCNAIVSSAAIDLFSNCNRIEYSARIFKDSNIWDTALCNSMISSYALN 339

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
           SLEENAL+LFVLTL KNIRPTEFT
Sbjct: 340 SLEENALQLFVLTLRKNIRPTEFT 363



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 53/187 (28%), Positives = 88/187 (47%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I    ++ G  L N +V +  ID++     ++Y+  +F      D    NS+ISS  
Sbjct: 279 GKQILCLCVKMGF-LCNAIVSSAAIDLFSNCNRIEYSARIFKDSNIWDTALCNSMISSYA 337

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
            +  E+ AL  F L       P EFT+S +L  C+    ++ G Q     IK+GF+ + +
Sbjct: 338 LNSLEENALQLFVLTLRKNIRPTEFTLSCIL-SCTTTFPVDLGIQAHSLVIKLGFVSDPV 396

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           VS++ +D++     I+ +  IF D    D    N+MI   A+N     +L L+   L   
Sbjct: 397 VSTSLVDMYCKYGLIDSATNIFNDLLTRDLISWNTMIFGLAINGESTKSLSLYYELLELG 456

Query: 594 IRPTEFT 614
            +P   T
Sbjct: 457 GQPDRIT 463



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 32/216 (14%)
 Frame = +3

Query: 63  IHGNMLRNGVDLSNVVVGNTLIDMYGKLGL------------------------------ 152
           +HG +++ G +  N  +GN  +D+Y K G                               
Sbjct: 51  LHGKLIKLGFN-KNTFLGNCYLDLYSKFGTKIDAFKVFDEIPYKNAVSWNIWLKVLVQSG 109

Query: 153 -VDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLI 329
            V  A  +F  M   DV+SWNS+IS     G  + AL  F  M+     P  +T S ++ 
Sbjct: 110 DVHCARQLFDEMPERDVVSWNSMISGYALYGLFENALGVFLEMQKYGIRPSGYTYSILV- 168

Query: 330 GCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTA 506
             S++     GK+I    ++ G  L N +V ++ ID++     ++ +  +F      D  
Sbjct: 169 --SHVEFAFHGKEIHGNMLRNGVDLSNVVVGNSLIDMYGKLGIVDYATGVFLAMETVDVI 226

Query: 507 LCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
             NS+ISS   +  E+ AL  F L  +    P EFT
Sbjct: 227 SWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFT 262



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 35/106 (33%), Positives = 61/106 (57%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G + H  +++ G  +S+ VV  +L+DMY K GL+D AT +F  + T D+ISWN++I    
Sbjct: 379 GIQAHSLVIKLGF-VSDPVVSTSLVDMYCKYGLIDSATNIFNDLLTRDLISWNTMIFGLA 437

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQI 371
            +G    +LS +  +      PD  T++++L+ CS    +++G  I
Sbjct: 438 INGESTKSLSLYYELLELGGQPDRITLTALLLACSYGGFVDEGISI 483


>ref|XP_004237750.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Solanum lycopersicum]
          Length = 527

 Score =  378 bits (970), Expect = e-103
 Identities = 188/204 (92%), Positives = 193/204 (94%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           SGYT+SIL+SYVEFAFHGKEIHGNMLRNGVDLSNVVVGN+LIDMYGKLGLVDYAT VFLA
Sbjct: 37  SGYTYSILVSYVEFAFHGKEIHGNMLRNGVDLSNVVVGNSLIDMYGKLGLVDYATAVFLA 96

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           METVDVISWNSLISSCCKSGYEDTALSYFSLMRAC+YSPDEFTMSSVLIGCSNLRSLEKG
Sbjct: 97  METVDVISWNSLISSCCKSGYEDTALSYFSLMRACRYSPDEFTMSSVLIGCSNLRSLEKG 156

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQILC CIKMGFL NTIVSSAAIDLFS CN IEDSARIFK SN WD ALCNSMISSY LN
Sbjct: 157 KQILCLCIKMGFLRNTIVSSAAIDLFSTCNSIEDSARIFKYSNSWDIALCNSMISSYTLN 216

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
           + EENALRLFVLTL KNIRPTEFT
Sbjct: 217 NFEENALRLFVLTLRKNIRPTEFT 240



 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 50/187 (26%), Positives = 89/187 (47%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I    ++ G  L N +V +  ID++     ++ +  +F    + D+   NS+ISS  
Sbjct: 156 GKQILCLCIKMGF-LRNTIVSSAAIDLFSTCNSIEDSARIFKYSNSWDIALCNSMISSYT 214

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
            + +E+ AL  F L       P EFT+S +L  C+    ++ G Q     IK+GF+ + +
Sbjct: 215 LNNFEENALRLFVLTLRKNIRPTEFTLSCIL-SCTTTFPVDLGIQAHSLVIKLGFVSDPV 273

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           VS++ +D++     I+ +   F D    D    N++I   A+N     +L L+   L   
Sbjct: 274 VSTSLVDMYCKYGLIDSATNTFNDLLTRDLISWNTIIFGLAINGEPTKSLSLYYELLELG 333

Query: 594 IRPTEFT 614
            +P   T
Sbjct: 334 GQPDRIT 340



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 34/95 (35%), Positives = 55/95 (57%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G + H  +++ G  +S+ VV  +L+DMY K GL+D AT  F  + T D+ISWN++I    
Sbjct: 256 GIQAHSLVIKLGF-VSDPVVSTSLVDMYCKYGLIDSATNTFNDLLTRDLISWNTIIFGLA 314

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCS 338
            +G    +LS +  +      PD  T+++VL+ CS
Sbjct: 315 INGEPTKSLSLYYELLELGGQPDRITLTAVLLACS 349



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
 Frame = +3

Query: 195 DVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQIL 374
           DV+SWNS+IS     G  + AL  F  M+    +P  +T S ++   S +     GK+I 
Sbjct: 5   DVVSWNSMISG---YGLFENALGVFLEMQKYGITPSGYTYSILV---SYVEFAFHGKEIH 58

Query: 375 CFCIKMGF-LCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLE 551
              ++ G  L N +V ++ ID++     ++ +  +F      D    NS+ISS   +  E
Sbjct: 59  GNMLRNGVDLSNVVVGNSLIDMYGKLGLVDYATAVFLAMETVDVISWNSLISSCCKSGYE 118

Query: 552 ENALRLFVLTLSKNIRPTEFT 614
           + AL  F L  +    P EFT
Sbjct: 119 DTALSYFSLMRACRYSPDEFT 139


>gb|EMJ01470.1| hypothetical protein PRUPE_ppa014901mg [Prunus persica]
          Length = 629

 Score =  275 bits (704), Expect = 6e-72
 Identities = 132/204 (64%), Positives = 168/204 (82%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           S YTFSI++S V  + HGK+IHG M+RNG++LSN+++GN+LIDMYGKLG VDYA GVF  
Sbjct: 144 SEYTFSIVMSLVTCSCHGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLGCVDYAFGVFFT 203

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME VD+ISWNSLIS C +SGY + AL  F  MR+ K+SPDEFT+SSV+  C NL +LEKG
Sbjct: 204 MEEVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPDEFTISSVINVCCNLPNLEKG 263

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQI  FC+K+GFL N+I+SSAAIDLFS CNR+ED+ R+F++ + WD+A+CNSMISSYA +
Sbjct: 264 KQIFAFCLKVGFLSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSMISSYARH 323

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
              E+AL+LFVLTL +N+RPTEFT
Sbjct: 324 ECVEDALQLFVLTLRENLRPTEFT 347



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 59/187 (31%), Positives = 91/187 (48%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I    L+ G  LSN ++ +  ID++ K   ++ A  +F  ++  D    NS+ISS  
Sbjct: 263 GKQIFAFCLKVGF-LSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSMISSYA 321

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
           +    + AL  F L       P EFT+SS+L   S     E G QI    +K+GF  + I
Sbjct: 322 RHECVEDALQLFVLTLRENLRPTEFTLSSLLNSASIFLPAELGSQIHSLVVKLGFESDPI 381

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           V+S+ ID +S    I  + +IF +  + D    N+MI   A N      L +F   +S+ 
Sbjct: 382 VASSLIDFYSKVGLINYAMKIFANVGVKDLTSWNTMIIGMAHNGKVFETLNIFEELISEG 441

Query: 594 IRPTEFT 614
           I P + T
Sbjct: 442 IAPDKLT 448



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
 Frame = +3

Query: 102 NVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMR 281
           N+V  N  +  + + G +  A  +F  M   DV+SWNS+IS C   G+ D A   FS M+
Sbjct: 78  NIVSWNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSMISGCVSGGFFDNAFCLFSKMQ 137

Query: 282 ACKYSPDEFTMSSV--LIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCN 452
                P E+T S V  L+ CS       GKQI    I+ G  L N I+ ++ ID++    
Sbjct: 138 IAGMRPSEYTFSIVMSLVTCSC-----HGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLG 192

Query: 453 RIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
            ++ +  +F      D    NS+IS    +   E AL  F    S    P EFT
Sbjct: 193 CVDYAFGVFFTMEEVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPDEFT 246



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 41/159 (25%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G +IH  +++ G + S+ +V ++LID Y K+GL++YA  +F  +   D+ SWN++I    
Sbjct: 364 GSQIHSLVVKLGFE-SDPIVASSLIDFYSKVGLINYAMKIFANVGVKDLTSWNTMIIGMA 422

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIK-MGFLCNT 410
            +G     L+ F  + +   +PD+ T++ VL+ C+    +++G  +     K  G +   
Sbjct: 423 HNGKVFETLNIFEELISEGIAPDKLTLAGVLLACNLGGLVDEGMTMFLSMEKEYGIVPQD 482

Query: 411 IVSSAAIDLFSNCNRIEDSARIFKD------SNIWDTAL 509
               + +DL S+  +++++  I  +      S IW+  L
Sbjct: 483 EHYMSIVDLLSSTGKLKEAIDIVAEMPYEASSMIWELIL 521


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  275 bits (703), Expect = 7e-72
 Identities = 132/204 (64%), Positives = 167/204 (81%)
 Frame = +3

Query: 3    SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
            SG+T+S L+S+V  A  GK+IH +M+RNGVDLSNVVVGN+LI MYGK G+VDYA GVF+ 
Sbjct: 841  SGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFIT 900

Query: 183  METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
            ME +D+ISWNSLI SC KSGY++ AL  F LMR+  YSPD+FT+S+V+  CSNL+ LEKG
Sbjct: 901  MEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKG 960

Query: 363  KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
            +QI   CI++GFL N+IVSSA+IDLFS CNR+EDS R+F++   WD+ LCN+MISSYA +
Sbjct: 961  EQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWH 1020

Query: 543  SLEENALRLFVLTLSKNIRPTEFT 614
               ENAL+LFVLTL +N+RPTEFT
Sbjct: 1021 GFGENALQLFVLTLRENLRPTEFT 1044



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 31/212 (14%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVD------------ 197
           GK+IH  ++ + V+  +V+ G++L+++YGK G +D A  V   M+  D            
Sbjct: 192 GKQIHARIVVDEVEFDSVL-GSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYA 250

Query: 198 -------------------VISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSS 320
                              V+ WNS+IS    +     AL  F+ MR      D  T +S
Sbjct: 251 SCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFAS 310

Query: 321 VLIGCSNLRSLEKGKQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWD 500
           VL  CS L  +++G Q+     K+GF  + I+ SA +D++S C R +D+ ++F D   +D
Sbjct: 311 VLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYD 370

Query: 501 TALCNSMISSYALNSLEENALRLFVLTLSKNI 596
           T L NSMI+ Y+     ++A ++F    SK++
Sbjct: 371 TILLNSMITVYSNCGRIDDARQIFDTMPSKSL 402



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 49/171 (28%), Positives = 86/171 (50%)
 Frame = +3

Query: 102 NVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMR 281
           + ++ N++I +Y   G +D A  +F  M +  +ISWNS+I    ++     AL  F  M 
Sbjct: 370 DTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMN 429

Query: 282 ACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIE 461
                 D+F+++ V+  C+++ SLE G+QI      +G   + I+S++ +D +  C  +E
Sbjct: 430 KLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVE 489

Query: 462 DSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
              ++F      D    NSM+  YA N     AL +F    S  ++PT+ T
Sbjct: 490 HGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDIT 540



 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 55/187 (29%), Positives = 89/187 (47%)
 Frame = +3

Query: 54   GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
            G++I    +R G  LSN +V +  ID++ K   ++ +  VF  +   D +  N++ISS  
Sbjct: 960  GEQIFALCIRVGF-LSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYA 1018

Query: 234  KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
              G+ + AL  F L       P EFT+S VL   S L  +++G QI    +K G   + I
Sbjct: 1019 WHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVI 1078

Query: 414  VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
            V+S+ +++++    I+ + + F      D    N+MI   A N     AL +F   L   
Sbjct: 1079 VASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGG 1138

Query: 594  IRPTEFT 614
              P E T
Sbjct: 1139 PPPDEIT 1145



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 10/178 (5%)
 Frame = +3

Query: 9    YTFSILISYVEFAF---HGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
            +T SI++S V        G +IH  ++++G++ S+V+V ++L++MY K GL+D A   F 
Sbjct: 1043 FTLSIVLSAVSILLPVDQGSQIHSLVVKSGLE-SDVIVASSLVEMYAKFGLIDSAMKTFA 1101

Query: 180  AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
             +   D+ISWN++I     +G    AL  F  +      PDE T++ VL+ C+    +++
Sbjct: 1102 KIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDE 1161

Query: 360  GKQILCFCIKMGFLCNTIVSSAAI-DLFSNCNRIEDSARIFK------DSNIWDTALC 512
            G  I     K   +   I   A I D+ S   +++++  I +         IW + LC
Sbjct: 1162 GLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLC 1219



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
 Frame = +3

Query: 102  NVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMR 281
            N++  N  +  + + G ++ A  VF  M   DV+SWN++IS     G  D A  +FS M+
Sbjct: 775  NLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQ 834

Query: 282  ACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCNRI 458
                 P  FT S++L   S + S  +GKQI    I+ G  L N +V ++ I ++     +
Sbjct: 835  KAGIRPSGFTYSTLL---SFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVV 891

Query: 459  EDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
            + +  +F      D    NS+I S   +  +  ALR FVL  S    P +FT
Sbjct: 892  DYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFT 943



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G++I       G++   ++   +L+D Y K GLV++   +F  M   D + WNS++    
Sbjct: 456 GEQIFARATIIGLEFDQII-STSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYA 514

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
            +G+   AL+ F  MR+    P + T   VL  C +   +E+G++   + +K+ +  N  
Sbjct: 515 TNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWF-YAMKLDYHINPG 573

Query: 414 VS--SAAIDLFSNCNRIEDSARIFK------DSNIWDTAL 509
           +   S  +DL++    +ED+  + +      D+++W + L
Sbjct: 574 IEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVL 613



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
 Frame = +3

Query: 117 NTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYF---SLMRAC 287
           N +I  + K G ++ A  +F  M   + I+WNS+I     +G    A+  F   SL    
Sbjct: 108 NVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLE 167

Query: 288 KYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDS 467
           ++  D F +++V+  C+NL +L+ GKQI    +      ++++ S+ ++L+  C  I+ +
Sbjct: 168 RFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSA 227

Query: 468 ARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVL 578
             +       D    +++IS YA      +A R+F L
Sbjct: 228 NHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCL 264


>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Vitis vinifera]
          Length = 665

 Score =  273 bits (698), Expect = 3e-71
 Identities = 131/204 (64%), Positives = 166/204 (81%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           SG+T+S L+S+V  A  GK+IH +M+RNGVDLSNVVVGN+LI MYGK G+VDYA GVF+ 
Sbjct: 168 SGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFIT 227

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME +D+ SWNSLI SC KSGY++ AL  F LMR+  YSPD+FT+S+V+  CSNL+ LEKG
Sbjct: 228 MEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKG 287

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           +QI   CI++GFL N+IVSSA+IDLFS CNR+EDS R+F++   WD+ LCN+MISSYA +
Sbjct: 288 EQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWH 347

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
              ENAL+LFVLTL +N+RPTEFT
Sbjct: 348 GFGENALQLFVLTLRENLRPTEFT 371



 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 55/187 (29%), Positives = 89/187 (47%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G++I    +R G  LSN +V +  ID++ K   ++ +  VF  +   D +  N++ISS  
Sbjct: 287 GEQIFALCIRVGF-LSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYA 345

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
             G+ + AL  F L       P EFT+S VL   S L  +++G QI    +K G   + I
Sbjct: 346 WHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVI 405

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           V+S+ +++++    I+ + + F      D    N+MI   A N     AL +F   L   
Sbjct: 406 VASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGG 465

Query: 594 IRPTEFT 614
             P E T
Sbjct: 466 PPPDEIT 472



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 10/178 (5%)
 Frame = +3

Query: 9   YTFSILISYVEFAF---HGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           +T SI++S V        G +IH  ++++G++ S+V+V ++L++MY K GL+D A   F 
Sbjct: 370 FTLSIVLSAVSILLPVDQGSQIHSLVVKSGLE-SDVIVASSLVEMYAKFGLIDSAMKTFA 428

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
            +   D+ISWN++I     +G    AL  F  +      PDE T++ VL+ C+    +++
Sbjct: 429 KIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDE 488

Query: 360 GKQILCFCIKMGFLCNTIVSSAAI-DLFSNCNRIEDSARIFK------DSNIWDTALC 512
           G  I     K   +   I   A I D+ S   +++++  I +         IW + LC
Sbjct: 489 GLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLC 546



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
 Frame = +3

Query: 102 NVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMR 281
           N++  N  +  + + G ++ A  VF  M   DV+SWN++IS     G  D A  +FS M+
Sbjct: 102 NLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQ 161

Query: 282 ACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCNRI 458
                P  FT S++L   S + S  +GKQI    I+ G  L N +V ++ I ++     +
Sbjct: 162 KAGIRPSGFTYSTLL---SFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVV 218

Query: 459 EDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
           + +  +F      D    NS+I S   +  +  ALR FVL  S    P +FT
Sbjct: 219 DYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFT 270


>ref|XP_002520264.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540483|gb|EEF42050.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  273 bits (698), Expect = 3e-71
 Identities = 133/204 (65%), Positives = 164/204 (80%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           S +T+SI++S V  A HGKE+HG+M+R+G +  NVV+GN+LIDMYGK G VDYA GVF  
Sbjct: 40  SAFTYSIMVSIVFDALHGKELHGSMIRSGFNTLNVVLGNSLIDMYGKFGCVDYAFGVFFT 99

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME VDVI+WNSLI  CCKSGY + AL  F LMR+  YSPDEFT S+V+  CSNLR+L+KG
Sbjct: 100 MEEVDVITWNSLIIGCCKSGYGELALHQFCLMRSSGYSPDEFTCSAVITSCSNLRNLDKG 159

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQI  FC+K+GFL NTIVSSAAIDLFS CNR+EDS ++F++ +  ++ALCNSMISSYA +
Sbjct: 160 KQIFAFCLKVGFLSNTIVSSAAIDLFSKCNRLEDSVQLFEELDQLNSALCNSMISSYAGH 219

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
              ENAL+LFVL L +NIRPTEFT
Sbjct: 220 GFGENALQLFVLALRENIRPTEFT 243



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 56/187 (29%), Positives = 91/187 (48%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I    L+ G  LSN +V +  ID++ K   ++ +  +F  ++ ++    NS+ISS  
Sbjct: 159 GKQIFAFCLKVGF-LSNTIVSSAAIDLFSKCNRLEDSVQLFEELDQLNSALCNSMISSYA 217

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
             G+ + AL  F L       P EFT+SSVL   S +   E+G Q     +K+GF  + I
Sbjct: 218 GHGFGENALQLFVLALRENIRPTEFTISSVLSFIS-IFPPEQGTQFHSSVVKLGFELDAI 276

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           V+S+ + +++    I+ +  IFK   + D    N+MI     N     AL  F   L++ 
Sbjct: 277 VASSLVQMYTKFGFIDYAMDIFKSMTVRDLISWNTMIMGLTQNGRVIEALDAFKKLLNRG 336

Query: 594 IRPTEFT 614
             P   T
Sbjct: 337 PPPDRIT 343



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
 Frame = +3

Query: 9   YTFSILISYVEF--AFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           +T S ++S++       G + H ++++ G +L + +V ++L+ MY K G +DYA  +F +
Sbjct: 242 FTISSVLSFISIFPPEQGTQFHSSVVKLGFEL-DAIVASSLVQMYTKFGFIDYAMDIFKS 300

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           M   D+ISWN++I    ++G    AL  F  +      PD  T++ VL+ CS    +E+G
Sbjct: 301 MTVRDLISWNTMIMGLTQNGRVIEALDAFKKLLNRGPPPDRITLAGVLLACSYGGFIEEG 360

Query: 363 KQI 371
             I
Sbjct: 361 MTI 363



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
 Frame = +3

Query: 195 DVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQIL 374
           DV+SWNS+IS     GY D+AL  F  M+     P  FT S   I  S +     GK++ 
Sbjct: 5   DVVSWNSMISGFASYGYFDSALGIFGEMQNMGVRPSAFTYS---IMVSIVFDALHGKELH 61

Query: 375 CFCIKMGF-LCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLE 551
              I+ GF   N ++ ++ ID++     ++ +  +F      D    NS+I     +   
Sbjct: 62  GSMIRSGFNTLNVVLGNSLIDMYGKFGCVDYAFGVFFTMEEVDVITWNSLIIGCCKSGYG 121

Query: 552 ENALRLFVLTLSKNIRPTEFT 614
           E AL  F L  S    P EFT
Sbjct: 122 ELALHQFCLMRSSGYSPDEFT 142


>ref|XP_002306667.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222856116|gb|EEE93663.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 630

 Score =  271 bits (693), Expect = 1e-70
 Identities = 130/204 (63%), Positives = 162/204 (79%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           S +T+SIL+S V    HGKEIHG+++R+G+   NVV+GN+LIDMYGK   +DYA GVFL 
Sbjct: 147 SEFTYSILMSVVFGVRHGKEIHGSIVRSGLGALNVVLGNSLIDMYGKFSSLDYALGVFLT 206

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME +DVISWNSLIS CC+SGY + AL  F +MR+  YSPDEF++S V+  C NLR+LEKG
Sbjct: 207 MEELDVISWNSLISVCCQSGYPELALDKFCIMRSLGYSPDEFSVSVVITSCLNLRNLEKG 266

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQI   C+K+GFLCNTI+SSA IDLFS CNR+EDS R+F++ + WD+A+CNSMISSYA  
Sbjct: 267 KQIFALCVKVGFLCNTIISSATIDLFSKCNRLEDSVRLFEEQDQWDSAVCNSMISSYARC 326

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
              E+ LRLFVLTL K+IRPTEFT
Sbjct: 327 GFREDGLRLFVLTLKKDIRPTEFT 350



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 54/187 (28%), Positives = 88/187 (47%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I    ++ G  L N ++ +  ID++ K   ++ +  +F   +  D    NS+ISS  
Sbjct: 266 GKQIFALCVKVGF-LCNTIISSATIDLFSKCNRLEDSVRLFEEQDQWDSAVCNSMISSYA 324

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
           + G+ +  L  F L       P EFT+SSVL   S L+ LE+G Q     +K G   + I
Sbjct: 325 RCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSILK-LEQGTQFHSLAVKSGLELDAI 383

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           V+S+ ++++S    I+ S +IF      D    N+MI     N     AL+ F   +   
Sbjct: 384 VASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTMIMGLTHNGRVFEALQTFKELIRTG 443

Query: 594 IRPTEFT 614
           + P   T
Sbjct: 444 LPPDRIT 450



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
 Frame = +3

Query: 90  VDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYF 269
           +   N+V  N  +    K   +  A  VF  M   DV+SWNS+IS     GY D AL  F
Sbjct: 77  ISSKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWNSMISGYASRGYFDCALETF 136

Query: 270 SLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSN 446
             M+     P EFT S ++   S +  +  GK+I    ++ G    N ++ ++ ID++  
Sbjct: 137 WEMQKLGVRPSEFTYSILM---SVVFGVRHGKEIHGSIVRSGLGALNVVLGNSLIDMYGK 193

Query: 447 CNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
            + ++ +  +F      D    NS+IS    +   E AL  F +  S    P EF+
Sbjct: 194 FSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRSLGYSPDEFS 249



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G + H   +++G++L + +V ++L++MY K G +D +  +F  M   D+I+WN++I    
Sbjct: 366 GTQFHSLAVKSGLEL-DAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTMIMGLT 424

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFC-IKMGFLCNT 410
            +G    AL  F  +      PD  T++ VL+ CS    + +G  +      + G   + 
Sbjct: 425 HNGRVFEALQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTVFSSMEERYGVKPSN 484

Query: 411 IVSSAAIDLFSNCNRIEDSARIFKD------SNIWDTAL 509
              +  +DL     R++++  + +       S IW++ L
Sbjct: 485 EHYACFVDLLCQAGRLDEALYVAESMPYEPVSLIWESIL 523


>gb|EOY16505.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 645

 Score =  269 bits (688), Expect = 4e-70
 Identities = 128/203 (63%), Positives = 163/203 (80%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           S +TFSIL ++V  A  GKEIHGN++ +GV LSN+V+GN+LIDMYGKLGLVDYA GVF  
Sbjct: 147 SKFTFSILTTFVSCASQGKEIHGNIITSGVGLSNLVIGNSLIDMYGKLGLVDYAFGVFFN 206

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME VDV+SWNSLIS CC SGYED AL  F  MR   YSPDEFT+S+V+  C+NLR+L+KG
Sbjct: 207 MEEVDVVSWNSLISGCCNSGYEDMALKQFDQMRFAGYSPDEFTISNVISVCTNLRNLDKG 266

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           K+I   C+K+GF+ N+IVSSA IDLFS CNR+EDS ++F++   WD+ LC+SMISSYA +
Sbjct: 267 KEIFALCVKVGFISNSIVSSATIDLFSKCNRLEDSVKLFEEVERWDSVLCSSMISSYARH 326

Query: 543 SLEENALRLFVLTLSKNIRPTEF 611
            L+++AL LFVL+L ++ RPTEF
Sbjct: 327 GLQDDALLLFVLSLREDCRPTEF 349



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 52/187 (27%), Positives = 93/187 (49%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GKEI    ++ G  +SN +V +  ID++ K   ++ +  +F  +E  D +  +S+ISS  
Sbjct: 266 GKEIFALCVKVGF-ISNSIVSSATIDLFSKCNRLEDSVKLFEEVERWDSVLCSSMISSYA 324

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
           + G +D AL  F L       P EF + S+++ C    S E+G Q+    IK GF   +I
Sbjct: 325 RHGLQDDALLLFVLSLREDCRPTEFAI-SIVLSCITFISAEQGHQVHSLVIKSGFESESI 383

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           V+ + +D+++    I+ + +IF + ++ D    N++I   A N      L ++   L + 
Sbjct: 384 VACSLVDMYAKIGLIDPAMQIFSEMHVKDIISWNTLIMGLAHNGRAVETLEIYKELLREG 443

Query: 594 IRPTEFT 614
             P   T
Sbjct: 444 PAPDRIT 450



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
 Frame = +3

Query: 9   YTFSILISYVEF--AFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           +  SI++S + F  A  G ++H  ++++G + S  +V  +L+DMY K+GL+D A  +F  
Sbjct: 349 FAISIVLSCITFISAEQGHQVHSLVIKSGFE-SESIVACSLVDMYAKIGLIDPAMQIFSE 407

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGC 335
           M   D+ISWN+LI     +G     L  +  +     +PD  T++ VL+ C
Sbjct: 408 MHVKDIISWNTLIMGLAHNGRAVETLEIYKELLREGPAPDRITLAGVLLAC 458



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
 Frame = +3

Query: 102 NVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMR 281
           N++  N  ++   K G    A  +F  M   DV+SWNS+IS C   G+    L+ F  M 
Sbjct: 81  NIISWNIFLNGLLKFGHFKKACLMFDEMPAKDVVSWNSMISGCGWLGFWGYGLAVFKEMH 140

Query: 282 ACKYSPDEFTMS--SVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCN 452
            C   P +FT S  +  + C++     +GK+I    I  G  L N ++ ++ ID++    
Sbjct: 141 NCGVRPSKFTFSILTTFVSCAS-----QGKEIHGNIITSGVGLSNLVIGNSLIDMYGKLG 195

Query: 453 RIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
            ++ +  +F +    D    NS+IS    +  E+ AL+ F         P EFT
Sbjct: 196 LVDYAFGVFFNMEEVDVVSWNSLISGCCNSGYEDMALKQFDQMRFAGYSPDEFT 249


>ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Glycine max]
          Length = 630

 Score =  258 bits (658), Expect = 1e-66
 Identities = 124/203 (61%), Positives = 159/203 (78%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           SG+TFSIL+S V    H K+IH  M+R+GVDL NVV+GN+LI MYG+LGLV+Y+ GV + 
Sbjct: 146 SGFTFSILMSLVSSPSHAKQIHSRMIRSGVDLDNVVLGNSLITMYGRLGLVEYSFGVIMT 205

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           M+  DVISWNSLI +C ++G+ + AL  F  MR  ++ PD+FT S ++  CSNLR L+KG
Sbjct: 206 MKQFDVISWNSLIWACHRAGHHELALEQFYWMRGAEFLPDQFTCSVLMSVCSNLRDLDKG 265

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQ+  FC KMGF+ N+IVSSAAIDLFS CNR+EDS R+FK+ + WD+ALCNSMISSYA +
Sbjct: 266 KQVFAFCFKMGFVYNSIVSSAAIDLFSKCNRLEDSVRLFKEQDQWDSALCNSMISSYARH 325

Query: 543 SLEENALRLFVLTLSKNIRPTEF 611
            L E+ L+LFVLTL KNIRPTE+
Sbjct: 326 YLGEDTLQLFVLTLRKNIRPTEY 348



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 39/157 (24%), Positives = 74/157 (47%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK++     + G  + N +V +  ID++ K   ++ +  +F   +  D    NS+ISS  
Sbjct: 265 GKQVFAFCFKMGF-VYNSIVSSAAIDLFSKCNRLEDSVRLFKEQDQWDSALCNSMISSYA 323

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
           +    +  L  F L       P E+ +SS+L   S    +E G QI     K+GF  + +
Sbjct: 324 RHYLGEDTLQLFVLTLRKNIRPTEYMVSSLLSSVSIFLPVEVGNQIHSLVPKLGFESDAV 383

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMI 524
           V+++ + +++    I D+  IF +  I D    N+++
Sbjct: 384 VANSLVHMYAKFGFINDALNIFNEMKIKDLVSWNTIM 420



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
 Frame = +3

Query: 9   YTFSILISYVEFAFH---GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           Y  S L+S V        G +IH  + + G + S+ VV N+L+ MY K G ++ A  +F 
Sbjct: 348 YMVSSLLSSVSIFLPVEVGNQIHSLVPKLGFE-SDAVVANSLVHMYAKFGFINDALNIFN 406

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYF-SLMRACKYSPDEFTMSSVLIGCSNLRSLE 356
            M+  D++SWN+++      G     +  F  L+      PD  T+++VL+ C+    ++
Sbjct: 407 EMKIKDLVSWNTIMMGLTYYGRVSLTMDLFRELLTREGMLPDRITLTAVLLACNYGLLVD 466

Query: 357 KGKQI 371
           +G +I
Sbjct: 467 EGIEI 471


>ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Glycine max]
          Length = 630

 Score =  255 bits (652), Expect = 6e-66
 Identities = 125/203 (61%), Positives = 158/203 (77%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           SG+TFSIL+S V  + H K+IH  M+R+GVDL NVV+GN+LI++YGKLGLV+YA GV + 
Sbjct: 146 SGFTFSILMSLVSSSPHAKQIHCRMIRSGVDLDNVVLGNSLINIYGKLGLVEYAFGVIMI 205

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           M+  DVISWNSLI +C  +G+ + AL  F  MR  +  PD+FT S ++  CSNLR L+KG
Sbjct: 206 MKQFDVISWNSLIWACHSAGHHELALEQFYRMRGAELLPDQFTCSVLMSVCSNLRDLDKG 265

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQ+  FC KMGF+ N+IVSSAAIDLFS CNR+EDS R+FK  + WD+ LCNSMISS+A +
Sbjct: 266 KQVFAFCFKMGFIYNSIVSSAAIDLFSKCNRLEDSVRLFKKQDQWDSPLCNSMISSFARH 325

Query: 543 SLEENALRLFVLTLSKNIRPTEF 611
            L ENAL+LFVLTL KNIRPTE+
Sbjct: 326 DLGENALQLFVLTLRKNIRPTEY 348



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 41/157 (26%), Positives = 76/157 (48%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK++     + G  + N +V +  ID++ K   ++ +  +F   +  D    NS+ISS  
Sbjct: 265 GKQVFAFCFKMGF-IYNSIVSSAAIDLFSKCNRLEDSVRLFKKQDQWDSPLCNSMISSFA 323

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
           +    + AL  F L       P E+ +SS+L   S    +E G QI     K+GF  + +
Sbjct: 324 RHDLGENALQLFVLTLRKNIRPTEYMVSSLLSSVSIFLPVEVGNQIHSLVPKLGFESDAV 383

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMI 524
           V+++ +D+++    I D+  IF +  I D    N+++
Sbjct: 384 VANSLVDMYAKFGFIGDALNIFNEMKIKDLVSWNTIM 420



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
 Frame = +3

Query: 57  KEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL------------------- 179
           K +H + L+ G++ +   +GN  +D+Y + G ++ A  VF                    
Sbjct: 35  KIVHAHFLKLGLN-TYTYLGNRCLDLYSEFGHINDALKVFDDISHKNSTSWNICLKGLLK 93

Query: 180 ------------AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSV 323
                       AM   DV+SWNS+IS     GY   AL  F  M+     P  FT S +
Sbjct: 94  SGQPGKACHMFDAMPVRDVVSWNSMISGYASCGYLSHALELFVEMQGTGVRPSGFTFSIL 153

Query: 324 LIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWD 500
           +   S + S    KQI C  I+ G  L N ++ ++ I+++     +E +  +      +D
Sbjct: 154 M---SLVSSSPHAKQIHCRMIRSGVDLDNVVLGNSLINIYGKLGLVEYAFGVIMIMKQFD 210

Query: 501 TALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
               NS+I +       E AL  F       + P +FT
Sbjct: 211 VISWNSLIWACHSAGHHELALEQFYRMRGAELLPDQFT 248



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
 Frame = +3

Query: 9   YTFSILISYVEFAFH---GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           Y  S L+S V        G +IH  + + G + S+ VV N+L+DMY K G +  A  +F 
Sbjct: 348 YMVSSLLSSVSIFLPVEVGNQIHSLVPKLGFE-SDAVVANSLVDMYAKFGFIGDALNIFN 406

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYF-SLMRACKYSPDEFTMSSVLIGCSNLRSLE 356
            M+  D++SWN+++      G     +  F  L+      PD  T+++VL+ C+    ++
Sbjct: 407 EMKIKDLVSWNTIMMGLTYYGRVSLTMDLFRELLTREGILPDRITLTAVLLACNYGLLVD 466

Query: 357 KGKQILCFC-IKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFK------DSNIWDTAL 509
           +G +I     ++ G        +  +++ S   +++++  I +       S+IW + L
Sbjct: 467 EGIKIFSSMEMEFGVKPGEEHYACVVEMLSKAGKLKEAIDIIETMPCRTTSDIWRSIL 524


>gb|EXB37670.1| hypothetical protein L484_021877 [Morus notabilis]
          Length = 494

 Score =  255 bits (651), Expect = 8e-66
 Identities = 130/203 (64%), Positives = 156/203 (76%), Gaps = 1/203 (0%)
 Frame = +3

Query: 9   YTFSILISYVEFAFHGKEIHGNMLRN-GVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAM 185
           YTFSIL+S V  +  GK+IHG M+++ G+ LSNVV+GN+LI MYGKLGLVDYA GVFL M
Sbjct: 11  YTFSILMSLVSSSCQGKQIHGVMIQSCGLSLSNVVLGNSLISMYGKLGLVDYAFGVFLTM 70

Query: 186 ETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGK 365
             VD ISWNSLI +C +SG    AL  F LMR  ++SPD+FT+S+VL  C ++R LEKGK
Sbjct: 71  AKVDAISWNSLIWACYRSGCAQLALDQFRLMREIEHSPDQFTVSTVLGVCCDMRDLEKGK 130

Query: 366 QILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNS 545
           QI  FC K+GF  NTIVSSAAIDL S CNR+ED+ R+F D N WD+A+CNSMISSY  N 
Sbjct: 131 QIFAFCFKVGFFSNTIVSSAAIDLLSKCNRLEDAERVFSDLNRWDSAVCNSMISSYEGNG 190

Query: 546 LEENALRLFVLTLSKNIRPTEFT 614
           L ENA +LFVL L +NIRPTEFT
Sbjct: 191 LGENAAQLFVLMLRENIRPTEFT 213



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 52/179 (29%), Positives = 83/179 (46%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I     + G   SN +V +  ID+  K   ++ A  VF  +   D    NS+ISS  
Sbjct: 129 GKQIFAFCFKVGF-FSNTIVSSAAIDLLSKCNRLEDAERVFSDLNRWDSAVCNSMISSYE 187

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
            +G  + A   F LM      P EFT SSVL   S     ++G QI    ++ G   ++I
Sbjct: 188 GNGLGENAAQLFVLMLRENIRPTEFTFSSVLSCLSGSLPPDQGSQIHSLIVRTGMDSDSI 247

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSK 590
           V+S+ + ++S+   I+ + +IF +    D    N++I     N     AL +F   + K
Sbjct: 248 VASSLVQMYSSVGMIDYAMKIFVNLVEKDLVSWNTIIFGLTYNGRVFKALDIFKALIDK 306


>ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Cicer arietinum]
          Length = 643

 Score =  254 bits (650), Expect = 1e-65
 Identities = 123/204 (60%), Positives = 158/204 (77%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           S +TFSIL S V    H K++HG M+R+G+DLSNVV+GN+LI MYGKLGLVDY+  VF  
Sbjct: 146 SWFTFSILTSLVSSPCHAKQVHGRMIRSGMDLSNVVLGNSLIAMYGKLGLVDYSFDVFFT 205

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           M+ +DVISWNSL+ +CC++  ++ AL  F  MRA +  PD+FT S ++  CSNLR LEKG
Sbjct: 206 MKQLDVISWNSLMWACCRADCQELALEQFCYMRAAELLPDQFTCSILMSVCSNLRDLEKG 265

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQ+  FC K+GF+ N+IVSSAAIDLFS CNR+ED+ R+FK+   W++ALCNSMIS YA +
Sbjct: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFKEHEQWNSALCNSMISCYARH 325

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
            L E+AL+LFVLTL KNI PTE+T
Sbjct: 326 DLGEDALQLFVLTLRKNIMPTEYT 349



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
 Frame = +3

Query: 9   YTFSILISY---VEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           +T SIL+S    +     GK++     + G  + N +V +  ID++ K   ++ A  +F 
Sbjct: 247 FTCSILMSVCSNLRDLEKGKQVFAFCFKVGF-VYNSIVSSAAIDLFSKCNRLEDAVRLFK 305

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
             E  +    NS+IS   +    + AL  F L       P E+T+S +L   +    +E 
Sbjct: 306 EHEQWNSALCNSMISCYARHDLGEDALQLFVLTLRKNIMPTEYTVSCLLSSVTIFLPIEV 365

Query: 360 GKQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYAL 539
           G QI     K+GF  +T+V S+ +D+++    I+D+  IF +    D    N+++   + 
Sbjct: 366 GNQIHALVPKLGFESDTVVVSSLVDMYAKFGFIDDALNIFNEIKTKDLVTWNTIMMGLSY 425

Query: 540 NSLEENALRLFVLTLSKNIRPTEFT 614
           N      + LF   + +   P + T
Sbjct: 426 NGKVSVTIDLFKELVREGTPPDQIT 450



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
 Frame = +3

Query: 9   YTFSILISYVEFAFH---GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           YT S L+S V        G +IH  + + G +   VVV ++L+DMY K G +D A  +F 
Sbjct: 348 YTVSCLLSSVTIFLPIEVGNQIHALVPKLGFESDTVVV-SSLVDMYAKFGFIDDALNIFN 406

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
            ++T D+++WN+++     +G     +  F  +      PD+ T ++VL+ C+    +++
Sbjct: 407 EIKTKDLVTWNTIMMGLSYNGKVSVTIDLFKELVREGTPPDQITFAAVLLACNYGNLVDE 466

Query: 360 GKQILCFC-IKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTA-LCNSMISSY 533
           G +I     ++ G        S  +++     +++++  I K  +   T  +  S++S+ 
Sbjct: 467 GIKIFSLMEMEFGIKPEEEHYSYVVEMLCRAGKLKEAIAIVKKMSYGTTLDIWRSILSAC 526

Query: 534 ALN 542
           A++
Sbjct: 527 AVH 529



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 42/238 (17%)
 Frame = +3

Query: 27  ISYVEFAFHG----------KEIHGNMLRNGVDLSNVVVGNTLIDMYG------------ 140
           +SY  F  H           K +H   L+ G++ +   +GN +ID+Y             
Sbjct: 15  LSYCSFLLHHCLSHKSPYFLKTVHARFLKLGLN-TYTYLGNRIIDLYTEFGHINDALKVF 73

Query: 141 -------------------KLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALS 263
                              K G +D A  +F  M   DV+SWN+LIS     G+   AL 
Sbjct: 74  DDISYKNSTSWNICLKGLVKSGQLDNACHMFDEMPVRDVVSWNTLISGYASYGFSSHALE 133

Query: 264 YFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLF 440
            F  M++    P  FT S   I  S + S    KQ+    I+ G  L N ++ ++ I ++
Sbjct: 134 LFVEMQSTGVKPSWFTFS---ILTSLVSSPCHAKQVHGRMIRSGMDLSNVVLGNSLIAMY 190

Query: 441 SNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
                ++ S  +F      D    NS++ +      +E AL  F    +  + P +FT
Sbjct: 191 GKLGLVDYSFDVFFTMKQLDVISWNSLMWACCRADCQELALEQFCYMRAAELLPDQFT 248


>ref|XP_004292628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 528

 Score =  253 bits (646), Expect = 3e-65
 Identities = 124/204 (60%), Positives = 160/204 (78%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           S +TFSI++S V    HGKEIHG M+R GV+LSNVVVGN+LI MYGK+G VDYA GVF+ 
Sbjct: 40  SEFTFSIVMSVVSSGCHGKEIHGGMIRKGVNLSNVVVGNSLIHMYGKIGSVDYAFGVFMC 99

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME +DVISWNSLI  C ++GYE+ A+  F LMR  ++SPDEFT+S+V+  C NL  L +G
Sbjct: 100 MEELDVISWNSLIWGCHRAGYEELAIDQFVLMRGTEHSPDEFTISTVINVCCNLLDLARG 159

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQI+ F +K+GF  N+IVSSAAID+FS CNR+ED+  +F++ +  D+A+CNSMISSYA +
Sbjct: 160 KQIIAFSLKVGFFSNSIVSSAAIDMFSKCNRLEDAVLLFQELSWSDSAVCNSMISSYARH 219

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
              +NA+ LFVLTL KN+RPTEFT
Sbjct: 220 GCVDNAVLLFVLTLRKNLRPTEFT 243



 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 59/187 (31%), Positives = 90/187 (48%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I    L+ G   SN +V +  IDM+ K   ++ A  +F  +   D    NS+ISS  
Sbjct: 159 GKQIIAFSLKVGF-FSNSIVSSAAIDMFSKCNRLEDAVLLFQELSWSDSAVCNSMISSYA 217

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
           + G  D A+  F L       P EFT+SSVL   S    +E+G QI  + IK+GF  + I
Sbjct: 218 RHGCVDNAVLLFVLTLRKNLRPTEFTLSSVLSCTSTFLPVEQGFQIHSWVIKLGFESDAI 277

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           V+S+ +D ++    I  + +IF    + D    N+MI   A N      L  F   +S+ 
Sbjct: 278 VASSLVDFYTKLGLINHAMKIFSSMAVKDLISWNTMIMGLAQNGKLFETLDTFKELVSEG 337

Query: 594 IRPTEFT 614
           +   + T
Sbjct: 338 MPADDVT 344



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 7/159 (4%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G +IH  +++ G + S+ +V ++L+D Y KLGL+++A  +F +M   D+ISWN++I    
Sbjct: 260 GFQIHSWVIKLGFE-SDAIVASSLVDFYTKLGLINHAMKIFSSMAVKDLISWNTMIMGLA 318

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIK-MGFLCNT 410
           ++G     L  F  + +     D+ T++ VL+ C+    +++G  +     K  G     
Sbjct: 319 QNGKLFETLDTFKELVSEGMPADDVTLAGVLLACNFGSFVDEGMSLFISMEKEYGIKPAE 378

Query: 411 IVSSAAIDLFSNCNRIEDSARIFK------DSNIWDTAL 509
                 +DL +   ++E +  I +       S IW++ L
Sbjct: 379 EHYMCIVDLLTRAGKLEAAMDIVEAMPYEPSSMIWESIL 417



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
 Frame = +3

Query: 195 DVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQIL 374
           DV+SWNS+IS     G    A+  FS M++    P EFT S V+   S + S   GK+I 
Sbjct: 5   DVVSWNSMISGYVSCGLVGNAMWMFSEMQSSGVRPSEFTFSIVM---SVVSSGCHGKEIH 61

Query: 375 CFCIKMGF-LCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLE 551
              I+ G  L N +V ++ I ++     ++ +  +F      D    NS+I        E
Sbjct: 62  GGMIRKGVNLSNVVVGNSLIHMYGKIGSVDYAFGVFMCMEELDVISWNSLIWGCHRAGYE 121

Query: 552 ENALRLFVLTLSKNIRPTEFT 614
           E A+  FVL       P EFT
Sbjct: 122 ELAIDQFVLMRGTEHSPDEFT 142


>ref|XP_006472888.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Citrus sinensis]
          Length = 640

 Score =  240 bits (612), Expect = 3e-61
 Identities = 120/204 (58%), Positives = 152/204 (74%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           SG+TFSIL+S V  A HGK+IHG+M+R+G+ LSNVV+GN+LIDMYGKLG++ YA GVFL 
Sbjct: 146 SGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLN 205

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME +D+ISWNSLIS C  SGY + AL  F  MR    SPDE+T+S ++  C+ LR+L+KG
Sbjct: 206 MEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGNSPDEYTISIIINACTKLRNLDKG 265

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQ+    +K+GFL N+IV SA IDLFS CNR+EDS R+F+  + WD A+ N MISSY   
Sbjct: 266 KQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISSYGRY 325

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
              E AL LF L L ++IRPTEFT
Sbjct: 326 GFGEVALELFQLMLREDIRPTEFT 349



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
 Frame = +3

Query: 9   YTFSILISY---VEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           YT SI+I+    +     GK++    ++ G  LSN +V +  ID++ K   ++ +  +F 
Sbjct: 247 YTISIIINACTKLRNLDKGKQVFALSVKVGF-LSNSIVLSATIDLFSKCNRLEDSVRLFE 305

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
            ++  D    N +ISS  + G+ + AL  F LM      P EFT+S VL     +  +E 
Sbjct: 306 QLDRWDYAVINVMISSYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEH 364

Query: 360 GKQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYAL 539
           G Q     IK GF  N +V+S+ +++++    I+ S  IF   +  D    N+++     
Sbjct: 365 GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQ 424

Query: 540 NSLEENALRLFVLTLSKNIRPTEFT 614
           N      L +F   L + + P   T
Sbjct: 425 NGRAAETLDVFEELLEEGLPPDRIT 449



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 32/228 (14%)
 Frame = +3

Query: 27  ISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGL------------------ 152
           +S+  F F  K IHG++ + G + ++  +GN  +D+Y + G                   
Sbjct: 26  LSFKSFDF-AKTIHGHLFKLGFN-AHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCIS 83

Query: 153 -------------VDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKY 293
                        +D A  VF  +   DV+SWNS+IS     GY D AL  FS M+    
Sbjct: 84  WNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGV 143

Query: 294 SPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCNRIEDSA 470
            P  FT S +L   S + S   GKQI    I+ G  L N ++ ++ ID++     +  + 
Sbjct: 144 RPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAF 200

Query: 471 RIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
            +F +    D    NS+IS    +   E AL  F         P E+T
Sbjct: 201 GVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGNSPDEYT 248



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
 Frame = +3

Query: 9   YTFSILISYVEF--AFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           +T S ++S +      HG + H   +++G D SN VV ++L++MY K G +D +T +F+ 
Sbjct: 348 FTLSCVLSSIPIPPVEHGSQFHSMAIKSGFD-SNAVVASSLMEMYAKTGSIDSSTEIFVK 406

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ++  D++SWN+++    ++G     L  F  +      PD  T+ +VL+ C+    ++KG
Sbjct: 407 LDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLVAVLLACNYGGFVDKG 466


>ref|XP_006434328.1| hypothetical protein CICLE_v10000854mg [Citrus clementina]
           gi|557536450|gb|ESR47568.1| hypothetical protein
           CICLE_v10000854mg [Citrus clementina]
          Length = 523

 Score =  240 bits (612), Expect = 3e-61
 Identities = 118/204 (57%), Positives = 154/204 (75%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           SG+TF+IL+S V  + HGK+IHG+M+R+G+ LSNVV+GN+LIDMYGKLG++ YA GVFL 
Sbjct: 29  SGFTFTILLSTVSSSCHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLN 88

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME +D+ISWNSLIS C  SGY + AL  F  MR   YSPDE+T+S V+  C+ LR+L+KG
Sbjct: 89  MEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKG 148

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQ+    +K+GFL N+IV SA IDLFS CNR+EDS R+F+  + WD+A+ N +IS+Y   
Sbjct: 149 KQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDSAVINVVISTYGRY 208

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
              E AL LF L L ++IRPTEFT
Sbjct: 209 GFGEVALELFQLMLREDIRPTEFT 232



 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
 Frame = +3

Query: 9   YTFSILISY---VEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           YT SI+I+    +     GK++    ++ G  LSN +V +  ID++ K   ++ +  +F 
Sbjct: 130 YTISIVINACTKLRNLDKGKQVFALSVKVGF-LSNSIVLSATIDLFSKCNRLEDSVRLFE 188

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
            ++  D    N +IS+  + G+ + AL  F LM      P EFT+S VL     +  +E 
Sbjct: 189 QLDRWDSAVINVVISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEH 247

Query: 360 GKQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYAL 539
           G Q     IK GF  N +V+S+ +++++    I+ S  IF   +  D    N+++     
Sbjct: 248 GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQ 307

Query: 540 NSLEENALRLFVLTLSKNIRPTEFT 614
           N      L +F   L + + P   T
Sbjct: 308 NGRAAETLDVFEELLEEGLPPDRIT 332



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 35/120 (29%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = +3

Query: 9   YTFSILISYVEF--AFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           +T S ++S +      HG + H   +++G D SN VV ++L++MY K G +D +T +F+ 
Sbjct: 231 FTLSCVLSSIPIPPVEHGSQFHSMAIKSGFD-SNAVVASSLMEMYAKTGSIDSSTEIFVK 289

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ++  D++SWN+++    ++G     L  F  +      PD  T+++VL+ C+    ++KG
Sbjct: 290 LDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKG 349


>ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  229 bits (583), Expect = 6e-58
 Identities = 112/204 (54%), Positives = 152/204 (74%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           S YTFSIL+S V  AFHGK++HG+M+R+GVD+S++V+GN+LIDMYGK+GLVDY   +F +
Sbjct: 147 SEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSS 206

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME VDVISWNSLI  C +SG+   AL+ F LMR  ++SPD+FT+S V+  C  L+ LE G
Sbjct: 207 MEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELELG 266

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQI  FC KMGF  N+IV SA IDLFS C+ ++ + ++F+D+N WD  LCN MISS+A +
Sbjct: 267 KQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKVAVQLFEDTNQWDPVLCNVMISSFAWH 326

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
               +++ LFV TL +N+ P + T
Sbjct: 327 GHWRDSMWLFVYTLRENLGPIDTT 350



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G +IH  +L+ G   S+V+V ++L+DMY K+G +D A  VF+ M   D+ISWN++I    
Sbjct: 367 GSQIHNLVLKLGFQ-SDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLV 425

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILC-FCIKMGFLCNT 410
            +G    AL  F+ +      PD  T++ VL+ CS    +E+G  I      + G +   
Sbjct: 426 DNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHGVVPRN 485

Query: 411 IVSSAAIDLFSNCNRIEDSARIFK 482
              S  ++L S   + E++  I K
Sbjct: 486 EHYSCVVNLLSRAGKFEEAVNIIK 509



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 50/187 (26%), Positives = 85/187 (45%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I     + G   +++V+  T ID++ K   +  A  +F      D +  N +ISS  
Sbjct: 266 GKQIFAFCFKMGFTSNSIVLSAT-IDLFSKCDSLKVAVQLFEDTNQWDPVLCNVMISSFA 324

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
             G+   ++  F         P + T+SSVL   S    +E G QI    +K+GF  + I
Sbjct: 325 WHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLGFQSDVI 384

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           V+S+ +D+++    I+D+ ++F D    D    N+MI     N     AL  F   + + 
Sbjct: 385 VTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEG 444

Query: 594 IRPTEFT 614
           + P   T
Sbjct: 445 VLPDRIT 451



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 32/220 (14%)
 Frame = +3

Query: 51  HGKEIHGNMLRNGVDLSNVVVGNTLIDMYG------------------------------ 140
           + K IHG +L+ G+D SN  + N  + +Y                               
Sbjct: 34  NAKTIHGQLLKLGLD-SNTFLANRCLQLYALFGPVHDVLKVFDGIKDKNIISWNICLKGM 92

Query: 141 -KLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMS 317
            + G VD A  +F  M   D++SWN++IS    SG+ ++A+     M+   + P E+T S
Sbjct: 93  FRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFGNSAMGVSLEMQNAGFRPSEYTFS 152

Query: 318 SVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCNRIEDSARIFKDSNI 494
            +L   S + S   GKQ+    I+ G  + + ++ ++ ID++     ++    IF     
Sbjct: 153 ILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEK 209

Query: 495 WDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
            D    NS+I     +     AL  F L  +    P +FT
Sbjct: 210 VDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFT 249


>ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  228 bits (582), Expect = 8e-58
 Identities = 112/204 (54%), Positives = 152/204 (74%)
 Frame = +3

Query: 3   SGYTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           S YTFSIL+S V  AFHGK++HG+M+R+GVD+S++V+GN+LIDMYGK+GLVDY   +F +
Sbjct: 147 SEYTFSILLSLVPSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSS 206

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKG 362
           ME VDVISWNSLI  C +SG+   AL+ F LMR  ++SPD+FT+S V+  C  L+ LE G
Sbjct: 207 MEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELELG 266

Query: 363 KQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALN 542
           KQI  FC KMGF  N+IV SA IDLFS C+ ++ + ++F+D+N WD  LCN MISS+A +
Sbjct: 267 KQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKVAVQLFEDTNQWDPVLCNVMISSFAWH 326

Query: 543 SLEENALRLFVLTLSKNIRPTEFT 614
               +++ LFV TL +N+ P + T
Sbjct: 327 GHWRDSMWLFVYTLRENLGPIDTT 350



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G +IH  +L+ G   S+V+V ++L+DMY K+G +D A  VF+ M   D+ISWN++I    
Sbjct: 367 GSQIHNLVLKLGFQ-SDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLV 425

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILC-FCIKMGFLCNT 410
            +G    AL  F+ +      PD  T++ VL+ CS    +E+G  I      + G +   
Sbjct: 426 DNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHGVVPRN 485

Query: 411 IVSSAAIDLFSNCNRIEDSARIFK 482
              S  ++L S   + E++  I K
Sbjct: 486 EHYSCVVNLLSRAGKFEEAVNIIK 509



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 50/187 (26%), Positives = 85/187 (45%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           GK+I     + G   +++V+  T ID++ K   +  A  +F      D +  N +ISS  
Sbjct: 266 GKQIFAFCFKMGFTSNSIVLSAT-IDLFSKCDSLKVAVQLFEDTNQWDPVLCNVMISSFA 324

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTI 413
             G+   ++  F         P + T+SSVL   S    +E G QI    +K+GF  + I
Sbjct: 325 WHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLGFQSDVI 384

Query: 414 VSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKN 593
           V+S+ +D+++    I+D+ ++F D    D    N+MI     N     AL  F   + + 
Sbjct: 385 VTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEG 444

Query: 594 IRPTEFT 614
           + P   T
Sbjct: 445 VLPDRIT 451



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 32/220 (14%)
 Frame = +3

Query: 51  HGKEIHGNMLRNGVDLSNVVVGNTLIDMYG------------------------------ 140
           + K IHG +L+ G+D SN  + N  + +Y                               
Sbjct: 34  NAKTIHGQLLKLGLD-SNTFLANRCLQLYALFGPVHDVLKVFDGIKDKNIISWNICLKGM 92

Query: 141 -KLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMS 317
            + G VD A  +F  M   D++SWN++IS    SG+ ++A+     M+   + P E+T S
Sbjct: 93  FRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFVNSAMGVSLEMQNAGFRPSEYTFS 152

Query: 318 SVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCNRIEDSARIFKDSNI 494
            +L   S + S   GKQ+    I+ G  + + ++ ++ ID++     ++    IF     
Sbjct: 153 ILL---SLVPSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEK 209

Query: 495 WDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
            D    NS+I     +     AL  F L  +    P +FT
Sbjct: 210 VDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFT 249


>ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutrema salsugineum]
           gi|557090330|gb|ESQ31038.1| hypothetical protein
           EUTSA_v10011320mg [Eutrema salsugineum]
          Length = 624

 Score =  227 bits (578), Expect = 2e-57
 Identities = 109/202 (53%), Positives = 147/202 (72%)
 Frame = +3

Query: 9   YTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAME 188
           +TFSIL S V    HG++IHGN++ +G+ LSN+VV N+L+DMY +LG++DYA  VF  ME
Sbjct: 136 FTFSILASLVSCVRHGEQIHGNVICSGLSLSNLVVWNSLMDMYRRLGVIDYALSVFSIME 195

Query: 189 TVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQ 368
             DVISWNSLIS C   G ++ AL  F LMR     PD +T+S+VL  CS LR L KGK+
Sbjct: 196 DRDVISWNSLISCCSDYGKKEVALDLFCLMREMGNQPDAYTVSTVLSVCSGLRDLCKGKK 255

Query: 369 ILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSL 548
            +  CIKMGFL NTIVS AAID+FS CNR+EDS ++F++   WD+ LCNS++ SY+ +  
Sbjct: 256 AIALCIKMGFLSNTIVSGAAIDMFSKCNRLEDSVKLFRELEKWDSVLCNSLVGSYSWHGF 315

Query: 549 EENALRLFVLTLSKNIRPTEFT 614
            E+ALRLF+L + +++RP +FT
Sbjct: 316 GEDALRLFILAMRQSVRPDKFT 337



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
 Frame = +3

Query: 96  LSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSL 275
           LSN +V    IDM+ K   ++ +  +F  +E  D +  NSL+ S    G+ + AL  F L
Sbjct: 266 LSNTIVSGAAIDMFSKCNRLEDSVKLFRELEKWDSVLCNSLVGSYSWHGFGEDALRLFIL 325

Query: 276 MRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGFLCNTIVSSAAIDLFSNCNR 455
                  PD+FT SSVL    N+  L++G Q+    IK+GF  +T V+++ ++++     
Sbjct: 326 AMRQSVRPDKFTFSSVL-SSMNVVMLDQGAQVHSLAIKLGFEQDTAVATSLMEMYFKTGL 384

Query: 456 IEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLF-VLTLSKNIRPTEFT 614
           ++ +  +F  ++  D    N++I   A N+L   +L +F  L + + ++P   T
Sbjct: 385 VDSAMGMFATTDEKDLFFWNTVIMGLARNNLAAESLAIFHQLLIDRALKPDRVT 438



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
 Frame = +3

Query: 9   YTFSILISYVEFAF--HGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           +TFS ++S +       G ++H   ++ G +  +  V  +L++MY K GLVD A G+F  
Sbjct: 336 FTFSSVLSSMNVVMLDQGAQVHSLAIKLGFE-QDTAVATSLMEMYFKTGLVDSAMGMFAT 394

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFSLM---RACKYSPDEFTMSSVLIGCSNLRSL 353
            +  D+  WN++I    ++     +L+ F  +   RA K  PD  T+  VL+ C     +
Sbjct: 395 TDEKDLFFWNTVIMGLARNNLAAESLAIFHQLLIDRALK--PDRVTLMGVLVACCYAGFV 452

Query: 354 EKGKQILCFCIKMGFL--CNTIVSSAAIDLFSNCNRIEDSARIFK------DSNIWDTAL 509
            +G QI     K   +  CN    +  I+L      I ++  I K       S+IW+  +
Sbjct: 453 NEGIQIFSSIGKTYGVNPCNEHY-ACIIELLCRAGMINEAIDIAKKMPFEPSSHIWEPII 511

Query: 510 CNSMISSY 533
           C S+   Y
Sbjct: 512 CASLDLGY 519



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
 Frame = +3

Query: 102 NVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMR 281
           N +  N  +    + G +++A  VF  M   DV+S+N++IS     G  + A+     M+
Sbjct: 68  NTITWNICLKGLLRNGYINHALDVFDEMPERDVVSFNTMISGLGSCGLMENAIRIHLEMQ 127

Query: 282 ACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGF-LCNTIVSSAAIDLFSNCNRI 458
            C   P EFT S   I  S +  +  G+QI    I  G  L N +V ++ +D++     I
Sbjct: 128 RCMIGPTEFTFS---ILASLVSCVRHGEQIHGNVICSGLSLSNLVVWNSLMDMYRRLGVI 184

Query: 459 EDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSKNIRPTEFT 614
           + +  +F      D    NS+IS  +    +E AL LF L      +P  +T
Sbjct: 185 DYALSVFSIMEDRDVISWNSLISCCSDYGKKEVALDLFCLMREMGNQPDAYT 236


>sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g43980, mitochondrial; Flags: Precursor
           gi|8778677|gb|AAF79685.1|AC022314_26 F9C16.15
           [Arabidopsis thaliana]
          Length = 633

 Score =  222 bits (565), Expect = 7e-56
 Identities = 107/202 (52%), Positives = 145/202 (71%)
 Frame = +3

Query: 9   YTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAME 188
           +TFSIL S V    HG++IHGN + +GV   N+VV N+++DMY +LG+ DYA  VFL ME
Sbjct: 149 FTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 208

Query: 189 TVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQ 368
             DV+SWN LI SC  SG ++ AL  F LMR  +  PDE+T+S V+  CS+LR L KGKQ
Sbjct: 209 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 268

Query: 369 ILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSL 548
            L  CIKMGFL N+IV  A ID+FS CNR++DS ++F++   WD+ LCNSMI SY+ +  
Sbjct: 269 ALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC 328

Query: 549 EENALRLFVLTLSKNIRPTEFT 614
            E+ALRLF+L +++++RP +FT
Sbjct: 329 GEDALRLFILAMTQSVRPDKFT 350



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
 Frame = +3

Query: 9   YTFSILISY---VEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           YT S+++S    +     GK+     ++ G  LSN +V    IDM+ K   +D +  +F 
Sbjct: 248 YTVSMVVSICSDLRELSKGKQALALCIKMGF-LSNSIVLGAGIDMFSKCNRLDDSVKLFR 306

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
            +E  D +  NS+I S       + AL  F L       PD+FT SSVL    N   L+ 
Sbjct: 307 ELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDH 365

Query: 360 GKQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYAL 539
           G  +    IK+GF  +T V+++ ++++     ++ +  +F  ++  D    N++I   A 
Sbjct: 366 GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLAR 425

Query: 540 NSLEENALRLF-VLTLSKNIRPTEFT 614
           NS    +L +F  L ++++++P   T
Sbjct: 426 NSRAVESLAIFNQLLMNQSLKPDRVT 451



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
 Frame = +3

Query: 9   YTFSILISYVEFAF--HGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           +TFS ++S +      HG ++H  +++ G DL +  V  +L++MY K G VD A GVF  
Sbjct: 349 FTFSSVLSSMNAVMLDHGADVHSLVIKLGFDL-DTAVATSLMEMYFKTGSVDLAMGVFAK 407

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFS-LMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
            +  D+I WN++I    ++     +L+ F+ L+      PD  T+  +L+ C     + +
Sbjct: 408 TDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNE 467

Query: 360 GKQILCFCIKM--------GFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCN 515
           G QI     K          + C  I     + + +    I D       S+IW+  LC 
Sbjct: 468 GIQIFSSMEKAHGVNPGNEHYAC-IIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCA 526

Query: 516 SM 521
           S+
Sbjct: 527 SL 528



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 1/188 (0%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G  I+   L + +   N +  N  +    K G ++ A  +F  M   DV+SWN++IS   
Sbjct: 65  GSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLV 124

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGF-LCNT 410
             G+ +  +  F  M+  +  P EFT S   I  S +  +  G+QI    I  G    N 
Sbjct: 125 SCGFHEYGIRVFFDMQRWEIRPTEFTFS---ILASLVTCVRHGEQIHGNAICSGVSRYNL 181

Query: 411 IVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSK 590
           +V ++ +D++      + +  +F      D    N +I S + +  +E AL  F L    
Sbjct: 182 VVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM 241

Query: 591 NIRPTEFT 614
            I+P E+T
Sbjct: 242 EIQPDEYT 249


>ref|NP_175064.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332193889|gb|AEE32010.1| pentatricopeptide
           repeat-containing protein-like protein [Arabidopsis
           thaliana]
          Length = 621

 Score =  222 bits (565), Expect = 7e-56
 Identities = 107/202 (52%), Positives = 145/202 (71%)
 Frame = +3

Query: 9   YTFSILISYVEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAME 188
           +TFSIL S V    HG++IHGN + +GV   N+VV N+++DMY +LG+ DYA  VFL ME
Sbjct: 137 FTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196

Query: 189 TVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQ 368
             DV+SWN LI SC  SG ++ AL  F LMR  +  PDE+T+S V+  CS+LR L KGKQ
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256

Query: 369 ILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSL 548
            L  CIKMGFL N+IV  A ID+FS CNR++DS ++F++   WD+ LCNSMI SY+ +  
Sbjct: 257 ALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC 316

Query: 549 EENALRLFVLTLSKNIRPTEFT 614
            E+ALRLF+L +++++RP +FT
Sbjct: 317 GEDALRLFILAMTQSVRPDKFT 338



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
 Frame = +3

Query: 9   YTFSILISY---VEFAFHGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFL 179
           YT S+++S    +     GK+     ++ G  LSN +V    IDM+ K   +D +  +F 
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIKMGF-LSNSIVLGAGIDMFSKCNRLDDSVKLFR 294

Query: 180 AMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
            +E  D +  NS+I S       + AL  F L       PD+FT SSVL    N   L+ 
Sbjct: 295 ELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDH 353

Query: 360 GKQILCFCIKMGFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYAL 539
           G  +    IK+GF  +T V+++ ++++     ++ +  +F  ++  D    N++I   A 
Sbjct: 354 GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLAR 413

Query: 540 NSLEENALRLF-VLTLSKNIRPTEFT 614
           NS    +L +F  L ++++++P   T
Sbjct: 414 NSRAVESLAIFNQLLMNQSLKPDRVT 439



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
 Frame = +3

Query: 9   YTFSILISYVEFAF--HGKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLA 182
           +TFS ++S +      HG ++H  +++ G DL +  V  +L++MY K G VD A GVF  
Sbjct: 337 FTFSSVLSSMNAVMLDHGADVHSLVIKLGFDL-DTAVATSLMEMYFKTGSVDLAMGVFAK 395

Query: 183 METVDVISWNSLISSCCKSGYEDTALSYFS-LMRACKYSPDEFTMSSVLIGCSNLRSLEK 359
            +  D+I WN++I    ++     +L+ F+ L+      PD  T+  +L+ C     + +
Sbjct: 396 TDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNE 455

Query: 360 GKQILCFCIKM--------GFLCNTIVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCN 515
           G QI     K          + C  I     + + +    I D       S+IW+  LC 
Sbjct: 456 GIQIFSSMEKAHGVNPGNEHYAC-IIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCA 514

Query: 516 SM 521
           S+
Sbjct: 515 SL 516



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 1/188 (0%)
 Frame = +3

Query: 54  GKEIHGNMLRNGVDLSNVVVGNTLIDMYGKLGLVDYATGVFLAMETVDVISWNSLISSCC 233
           G  I+   L + +   N +  N  +    K G ++ A  +F  M   DV+SWN++IS   
Sbjct: 53  GSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLV 112

Query: 234 KSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCFCIKMGF-LCNT 410
             G+ +  +  F  M+  +  P EFT S   I  S +  +  G+QI    I  G    N 
Sbjct: 113 SCGFHEYGIRVFFDMQRWEIRPTEFTFS---ILASLVTCVRHGEQIHGNAICSGVSRYNL 169

Query: 411 IVSSAAIDLFSNCNRIEDSARIFKDSNIWDTALCNSMISSYALNSLEENALRLFVLTLSK 590
           +V ++ +D++      + +  +F      D    N +I S + +  +E AL  F L    
Sbjct: 170 VVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM 229

Query: 591 NIRPTEFT 614
            I+P E+T
Sbjct: 230 EIQPDEYT 237