BLASTX nr result
ID: Atropa21_contig00009128
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00009128
(2197 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229028.1| PREDICTED: poly(A) polymerase-like [Solanum ... 356 e-122
ref|XP_004252931.1| PREDICTED: poly(A) polymerase-like [Solanum ... 346 e-119
ref|XP_006349957.1| PREDICTED: poly(A) polymerase-like [Solanum ... 341 e-118
ref|XP_006488811.1| PREDICTED: poly(A) polymerase-like [Citrus s... 289 1e-97
ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun... 283 3e-97
ref|XP_006419338.1| hypothetical protein CICLE_v10004938mg [Citr... 288 3e-97
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera] 292 1e-95
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer... 292 1e-95
gb|ESW19380.1| hypothetical protein PHAVU_006G119900g [Phaseolus... 274 2e-88
ref|XP_002311376.2| hypothetical protein POPTR_0008s10210g [Popu... 278 4e-88
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop... 256 9e-83
ref|XP_006299136.1| hypothetical protein CARUB_v10015278mg [Caps... 251 8e-81
gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana] 257 2e-80
ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana] gi|... 256 5e-80
gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-393... 250 2e-78
ref|XP_004503248.1| PREDICTED: poly(A) polymerase-like [Cicer ar... 280 1e-72
gb|EOY06786.1| Poly(A) polymerase, putative isoform 1 [Theobroma... 276 2e-71
ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypo... 219 7e-68
ref|XP_004984590.1| PREDICTED: poly(A) polymerase-like isoform X... 213 9e-68
ref|NP_001152292.1| LOC100285931 [Zea mays] gi|195654767|gb|ACG4... 219 2e-67
>ref|XP_004229028.1| PREDICTED: poly(A) polymerase-like [Solanum lycopersicum]
Length = 468
Score = 356 bits (913), Expect(2) = e-122
Identities = 176/227 (77%), Positives = 184/227 (81%), Gaps = 7/227 (3%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
VHNSESDIDALCVGPCFATI +DFFIVL N+L SRPEVS IHCVKGAKVPLM KF+GIS
Sbjct: 130 VHNSESDIDALCVGPCFATIEEDFFIVLRNILASRPEVSGIHCVKGAKVPLMRFKFEGIS 189
Query: 971 IDLPYAQLRVISIPE-------NVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVE 813
IDLPYA+L+VISIPE +VDVFNPFFLKNIDD S K LSGVRANRRILQLVPNVE
Sbjct: 190 IDLPYARLKVISIPELFLCYGQDVDVFNPFFLKNIDDKSWKSLSGVRANRRILQLVPNVE 249
Query: 812 IFQAVLCCVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXL 633
IFQAVL CV LWAKKRGVYGNLLGFFGGVHL V SAFICQRHP
Sbjct: 250 IFQAVLRCVKLWAKKRGVYGNLLGFFGGVHLAVLSAFICQRHPTASLSALFFIFFKTFAF 309
Query: 632 WPWPTPVVLQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF 492
WPWPTPV+LQDG AWPFIP DKV WMPIQLPCSPY F H+N VRSTF
Sbjct: 310 WPWPTPVILQDGVAWPFIPTDKVLWMPIQLPCSPYQFCHSNTVRSTF 356
Score = 111 bits (278), Expect(2) = e-122
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = -2
Query: 486 IKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVKS 307
IK+E RGH LTKD+LRPDFDWN L EP+PYPR Y KFVKIFLSASDKDEL DWVGCVKS
Sbjct: 359 IKSELLRGHTLTKDILRPDFDWNNLFEPYPYPRKYEKFVKIFLSASDKDELGDWVGCVKS 418
Query: 306 RF 301
RF
Sbjct: 419 RF 420
Score = 147 bits (370), Expect(2) = 2e-35
Identities = 72/92 (78%), Positives = 81/92 (88%)
Frame = -1
Query: 1741 PFPPGALGFRGNPDVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEW 1562
P P G LGF GN D ILRMEMERS+SLFQ+MG EGLVPS EEE+KRRNAIHKLK+IV+EW
Sbjct: 39 PHPGGVLGFGGNQDAILRMEMERSMSLFQIMGAEGLVPSLEEEMKRRNAIHKLKKIVREW 98
Query: 1561 VKTVAIRRALPKRFLRFASGTILTYGSYGLGV 1466
V+TV+ ALP+R+LRFASGTILTYGSYGLGV
Sbjct: 99 VQTVSYHHALPERYLRFASGTILTYGSYGLGV 130
Score = 32.0 bits (71), Expect(2) = 2e-35
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 8/39 (20%)
Frame = -3
Query: 1856 MEF---EKKQFIDHRHVNSLF-----GLRPNSNLDPSVP 1764
MEF E++Q +D RHV + GLRPN NLD VP
Sbjct: 1 MEFGYIERQQLVDPRHVYTYLPRWSIGLRPNLNLDYQVP 39
>ref|XP_004252931.1| PREDICTED: poly(A) polymerase-like [Solanum lycopersicum]
Length = 560
Score = 346 bits (888), Expect(2) = e-119
Identities = 171/225 (76%), Positives = 184/225 (81%), Gaps = 1/225 (0%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
V+NSESDIDALCVGP FATIA+DFFIVLHNML SRPEVS+IHCVK AKVPLM KFDGIS
Sbjct: 136 VYNSESDIDALCVGPYFATIAEDFFIVLHNMLASRPEVSEIHCVKDAKVPLMRFKFDGIS 195
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
IDLPYA+L+VISIPENVD+FNPFFLKNIDD S K LSGVRANR IL LVPN+E+FQAVL
Sbjct: 196 IDLPYARLKVISIPENVDIFNPFFLKNIDDTSWKSLSGVRANRSILYLVPNIEVFQAVLR 255
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
C+ LWAK+RGVY NLLGFFGG+HL V SAFICQRHP LWPWPTPV
Sbjct: 256 CIKLWAKRRGVYANLLGFFGGIHLAVLSAFICQRHPSASLSALILLLFKTFALWPWPTPV 315
Query: 611 VLQDGYAWPFIPV-DKVSWMPIQLPCSPYGFWHANIVRSTF*KSR 480
+LQD A PFIP DKVSWMPIQLPCSPY F H+NI RSTF K R
Sbjct: 316 ILQDQIARPFIPTHDKVSWMPIQLPCSPYEFCHSNITRSTFYKIR 360
Score = 113 bits (283), Expect(2) = e-119
Identities = 55/69 (79%), Positives = 56/69 (81%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI+TEF RGHMLTKDML PDFDWNIL EPFPY R YG FVKIFLSA DKDEL DWVG VK
Sbjct: 358 KIRTEFLRGHMLTKDMLSPDFDWNILFEPFPYARKYGLFVKIFLSACDKDELGDWVGWVK 417
Query: 309 SRFAA*LSK 283
SRF L K
Sbjct: 418 SRFRCLLVK 426
Score = 131 bits (330), Expect = 1e-27
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = -1
Query: 1723 LGFRGNPDVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAI 1544
LGF+ NPDVILRME+ERS+SL Q+M +EGLVP EEE+KRRNAI KLK+IV EWVKTV
Sbjct: 51 LGFQPNPDVILRMEIERSMSLLQVMVNEGLVPCGEEEMKRRNAIDKLKKIVVEWVKTVTY 110
Query: 1543 RRALPKRFLRFASGTILTYGSYGLGV 1466
+R LPK++L+FASGTILTYGSYGLGV
Sbjct: 111 QRGLPKKYLKFASGTILTYGSYGLGV 136
>ref|XP_006349957.1| PREDICTED: poly(A) polymerase-like [Solanum tuberosum]
Length = 560
Score = 341 bits (874), Expect(2) = e-118
Identities = 168/225 (74%), Positives = 181/225 (80%), Gaps = 1/225 (0%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
V+NSESDIDALCVGP FATIA+DFFI+LHNML S PEVS+IHCVK AKVPLM KFDGIS
Sbjct: 136 VYNSESDIDALCVGPYFATIAEDFFIILHNMLASSPEVSEIHCVKDAKVPLMRFKFDGIS 195
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
IDLPYA+L+VISIPENVDVFNPFFLKNIDD S K LSGVRANR IL LVPN+E+FQAVL
Sbjct: 196 IDLPYARLKVISIPENVDVFNPFFLKNIDDTSWKSLSGVRANRSILHLVPNIEVFQAVLR 255
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
C+ LWAK+RGVY NLLGFFGG+HL V SAFICQRHP LWPWPTPV
Sbjct: 256 CIKLWAKRRGVYANLLGFFGGIHLAVLSAFICQRHPSASLSALILLLFKTFTLWPWPTPV 315
Query: 611 VLQDGYAWPFIPV-DKVSWMPIQLPCSPYGFWHANIVRSTF*KSR 480
+LQD PF P DKVSWMPIQLPCSPY F H+NI RSTF K R
Sbjct: 316 ILQDQITRPFTPTHDKVSWMPIQLPCSPYEFCHSNITRSTFYKIR 360
Score = 113 bits (283), Expect(2) = e-118
Identities = 55/69 (79%), Positives = 56/69 (81%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI+TEF RGHMLTKDML PDFDWNIL EPFPY R YG FVKIFLSA DKDEL DWVG VK
Sbjct: 358 KIRTEFLRGHMLTKDMLSPDFDWNILFEPFPYARKYGLFVKIFLSACDKDELGDWVGWVK 417
Query: 309 SRFAA*LSK 283
SRF L K
Sbjct: 418 SRFRCLLVK 426
Score = 130 bits (327), Expect = 2e-27
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = -1
Query: 1723 LGFRGNPDVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAI 1544
LGF NPDVILRME+ERS+SL Q+M +EGLVP EEE+KRRNAI KLK+IV EWVKTV
Sbjct: 51 LGFPPNPDVILRMEIERSMSLLQVMVNEGLVPCGEEEMKRRNAIDKLKKIVVEWVKTVTY 110
Query: 1543 RRALPKRFLRFASGTILTYGSYGLGV 1466
+R LPK++L+FASGTILTYGSYGLGV
Sbjct: 111 QRGLPKKYLKFASGTILTYGSYGLGV 136
>ref|XP_006488811.1| PREDICTED: poly(A) polymerase-like [Citrus sinensis]
Length = 570
Score = 289 bits (740), Expect(2) = 1e-97
Identities = 145/230 (63%), Positives = 170/230 (73%), Gaps = 6/230 (2%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
VH SESDIDALC+GP FAT+A+DFF+VLHNML SRPEVS+IHCVK AKVPLM KFDGI
Sbjct: 151 VHGSESDIDALCLGPEFATMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGIL 210
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
IDLPYA+L V+S+PENVDV NPFFL+++D+ S K LSGVRAN+ ILQLVP++E FQ VL
Sbjct: 211 IDLPYARLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLR 270
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
C+ LWAK+RGVYGNL GF GGVHL + A +CQ HPK WPWPTPV
Sbjct: 271 CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV 330
Query: 611 VLQD------GYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*KSR 480
+LQD GY P + S MPI+LPCSP+ + H+NI RSTF K R
Sbjct: 331 MLQDPMLPAAGY-----PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIR 375
Score = 97.1 bits (240), Expect(2) = 1e-97
Identities = 41/69 (59%), Positives = 56/69 (81%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI+TEF RGH T+D++RPDFDW+ L EPFPY + Y +FV+++LSAS++D+L DWVG VK
Sbjct: 373 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVK 432
Query: 309 SRFAA*LSK 283
SRF + + K
Sbjct: 433 SRFRSLILK 441
Score = 99.8 bits (247), Expect = 4e-18
Identities = 55/97 (56%), Positives = 65/97 (67%)
Frame = -1
Query: 1756 PILSQPFPPGALGFRGNPDVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQ 1577
P S F + F NP V+ +M+ ERS+SL Q+M +EGLVPS EEE KRRN I KLK+
Sbjct: 55 PCNSPVFLVPSFNFPLNPSVLDQMDEERSLSLVQLMTNEGLVPSTEEEDKRRNVIQKLKE 114
Query: 1576 IVKEWVKTVAIRRALPKRFLRFASGTILTYGSYGLGV 1466
IV WVK VA +R LPK + TILTYGSYGLGV
Sbjct: 115 IVLAWVKRVAWQRRLPKEQIAETHATILTYGSYGLGV 151
>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
[Ricinus communis]
Length = 492
Score = 283 bits (725), Expect(2) = 3e-97
Identities = 136/225 (60%), Positives = 172/225 (76%), Gaps = 1/225 (0%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
V+ ESDIDA+CVGP FAT+A+DFFIVL NML +RPEVS+IHCVK AKVPLM KFDGIS
Sbjct: 74 VYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDAKVPLMRFKFDGIS 133
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
IDLPYAQL+V+++P+NVD+ NPFFL NID+ S K LSGVRAN+RILQ VPN+E FQ++L
Sbjct: 134 IDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQFVPNLENFQSMLR 193
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
C+ LWA++RGV GNL GF GGVHL + SA +CQ++P WPWPTPV
Sbjct: 194 CIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNFFATYATWPWPTPV 253
Query: 611 VLQDGYAWPFIP-VDKVSWMPIQLPCSPYGFWHANIVRSTF*KSR 480
+LQDG + P ++ S+MPI+LPCSP+ + H+NI +ST+ + R
Sbjct: 254 MLQDGMSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYRIR 298
Score = 101 bits (251), Expect(2) = 3e-97
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
+I+TEF RGH LTKD+L+PDFDWN + EPFPY + Y +FVKI+LSA D+DE+ DWVG VK
Sbjct: 296 RIRTEFLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVK 355
Query: 309 SRFAA*LSK 283
SRF A L K
Sbjct: 356 SRFRALLLK 364
Score = 87.8 bits (216), Expect = 2e-14
Identities = 45/74 (60%), Positives = 53/74 (71%)
Frame = -1
Query: 1687 MEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRFA 1508
ME ERS+SL + M +EGLVPSP EE KR+N I LKQIV W K VA +R LP+ +
Sbjct: 1 MEEERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIAST 60
Query: 1507 SGTILTYGSYGLGV 1466
+ TILTYGSYGLGV
Sbjct: 61 NATILTYGSYGLGV 74
>ref|XP_006419338.1| hypothetical protein CICLE_v10004938mg [Citrus clementina]
gi|557521211|gb|ESR32578.1| hypothetical protein
CICLE_v10004938mg [Citrus clementina]
Length = 458
Score = 288 bits (736), Expect(2) = 3e-97
Identities = 144/230 (62%), Positives = 170/230 (73%), Gaps = 6/230 (2%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
VH SESDIDALC+GP FA++A+DFF+VLHNML SRPEVS+IHCVK AKVPLM KFDGI
Sbjct: 39 VHGSESDIDALCLGPEFASMAEDFFVVLHNMLKSRPEVSEIHCVKDAKVPLMRFKFDGIL 98
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
IDLPYA+L V+S+PENVDV NPFFL+++D+ S K LSGVRAN+ ILQLVP++E FQ VL
Sbjct: 99 IDLPYARLHVLSVPENVDVLNPFFLRDLDETSWKSLSGVRANKCILQLVPDLEKFQPVLR 158
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
C+ LWAK+RGVYGNL GF GGVHL + A +CQ HPK WPWPTPV
Sbjct: 159 CIKLWAKRRGVYGNLHGFLGGVHLAILVAHVCQNHPKGSLNTLVANFFKTYAYWPWPTPV 218
Query: 611 VLQD------GYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*KSR 480
+LQD GY P + S MPI+LPCSP+ + H+NI RSTF K R
Sbjct: 219 MLQDPMLPAAGY-----PSETRSLMPIRLPCSPHEYCHSNITRSTFYKIR 263
Score = 97.1 bits (240), Expect(2) = 3e-97
Identities = 41/69 (59%), Positives = 56/69 (81%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI+TEF RGH T+D++RPDFDW+ L EPFPY + Y +FV+++LSAS++D+L DWVG VK
Sbjct: 261 KIRTEFLRGHNTTRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVK 320
Query: 309 SRFAA*LSK 283
SRF + + K
Sbjct: 321 SRFRSLILK 329
>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 292 bits (748), Expect(2) = 1e-95
Identities = 139/220 (63%), Positives = 168/220 (76%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
VH ESDIDALCVGP FA++ADDFFIVL NML SRPEVS+IHCVK AKVPLM KFDGIS
Sbjct: 185 VHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFDGIS 244
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
+DLPYAQL+++ +PEN++V NP+FL+NID+ S K LSGVRAN ILQLVPNVE FQ++L
Sbjct: 245 VDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILR 304
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
C+ LWAK+RGVYGNL G+FGGVHL + +AF+CQ++P WPWPTPV
Sbjct: 305 CIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPV 364
Query: 611 VLQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF 492
L+DG + + MPIQLPCSPYG+ H+NI +STF
Sbjct: 365 ALEDGRLPTGGTRETRALMPIQLPCSPYGYCHSNITKSTF 404
Score = 87.4 bits (215), Expect(2) = 1e-95
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
+I TE GH LT+D+LR DFDWN + EPF Y + Y +F+KI+LS+S++DEL DWVG VK
Sbjct: 406 RITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVK 465
Query: 309 SRFAA*LSK 283
SRF L+K
Sbjct: 466 SRFRFLLAK 474
Score = 111 bits (277), Expect = 1e-21
Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 3/95 (3%)
Frame = -1
Query: 1741 PFPPGAL---GFRGNPDVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIV 1571
PF P +L GF NP V++RME RSISL Q M +EGL+PSPEEE+KR+N I KLK+IV
Sbjct: 91 PFDPASLPQPGFVLNPAVLVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIV 150
Query: 1570 KEWVKTVAIRRALPKRFLRFASGTILTYGSYGLGV 1466
WVK VA +R PK+ + S TILTYGSYGLGV
Sbjct: 151 LTWVKRVAWQRQRPKQQIAVTSATILTYGSYGLGV 185
>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product
[Vitis vinifera]
Length = 563
Score = 292 bits (748), Expect(2) = 1e-95
Identities = 139/220 (63%), Positives = 168/220 (76%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
VH ESDIDALCVGP FA++ADDFFIVL NML SRPEVS+IHCVK AKVPLM KFDGIS
Sbjct: 144 VHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFDGIS 203
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
+DLPYAQL+++ +PEN++V NP+FL+NID+ S K LSGVRAN ILQLVPNVE FQ++L
Sbjct: 204 VDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILR 263
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
C+ LWAK+RGVYGNL G+FGGVHL + +AF+CQ++P WPWPTPV
Sbjct: 264 CIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPV 323
Query: 611 VLQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF 492
L+DG + + MPIQLPCSPYG+ H+NI +STF
Sbjct: 324 ALEDGRLPTGGTRETRALMPIQLPCSPYGYCHSNITKSTF 363
Score = 87.4 bits (215), Expect(2) = 1e-95
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
+I TE GH LT+D+LR DFDWN + EPF Y + Y +F+KI+LS+S++DEL DWVG VK
Sbjct: 365 RITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVK 424
Query: 309 SRFAA*LSK 283
SRF L+K
Sbjct: 425 SRFRFLLAK 433
Score = 111 bits (277), Expect = 1e-21
Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 3/95 (3%)
Frame = -1
Query: 1741 PFPPGAL---GFRGNPDVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIV 1571
PF P +L GF NP V++RME RSISL Q M +EGL+PSPEEE+KR+N I KLK+IV
Sbjct: 50 PFDPASLPQPGFVLNPAVLVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIV 109
Query: 1570 KEWVKTVAIRRALPKRFLRFASGTILTYGSYGLGV 1466
WVK VA +R PK+ + S TILTYGSYGLGV
Sbjct: 110 LTWVKRVAWQRQRPKQQIAVTSATILTYGSYGLGV 144
>gb|ESW19380.1| hypothetical protein PHAVU_006G119900g [Phaseolus vulgaris]
Length = 596
Score = 274 bits (700), Expect(2) = 2e-88
Identities = 133/224 (59%), Positives = 162/224 (72%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
VHNS SDIDALCV P FA+IA+DFF+VLH+ML RPEVS IHCVK AKVPLM KF+G+S
Sbjct: 232 VHNSGSDIDALCVAPFFASIAEDFFVVLHDMLKRRPEVSYIHCVKSAKVPLMRFKFEGVS 291
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
IDLPYA+L V+ +PENVD+ NPFF +NIDD S K LSGVRAN+ IL LVPN+E FQ +L
Sbjct: 292 IDLPYARLNVLYVPENVDILNPFFTRNIDDTSWKSLSGVRANKYILHLVPNIEKFQCMLR 351
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
C+ LWAK+RGVYG LLG+ GGVH+TV +A++ RHP WPWPTPV
Sbjct: 352 CLKLWAKRRGVYGTLLGYLGGVHMTVLAAYVLLRHPDATLNALIMNFFQTFAFWPWPTPV 411
Query: 611 VLQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*KSR 480
+LQ+G ++ S+MPI LP S Y + H NI +STF + R
Sbjct: 412 MLQEGMFTVIDAIETRSFMPIFLPSSRYEYCHTNITKSTFFRIR 455
Score = 81.6 bits (200), Expect(2) = 2e-88
Identities = 36/63 (57%), Positives = 49/63 (77%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
+I++EF RGH +TKD+L+PDF W+ + EPFPY + Y +FVKI+LS+ D L +WVG VK
Sbjct: 453 RIRSEFLRGHDMTKDILKPDFLWDNVFEPFPYSKRYSQFVKIYLSSPDHYALAEWVGWVK 512
Query: 309 SRF 301
SRF
Sbjct: 513 SRF 515
Score = 90.5 bits (223), Expect = 3e-15
Identities = 51/106 (48%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = -1
Query: 1780 LIHQCLR*PILSQPFPPGAL-GFRGNPDVILRMEMERSISLFQMMGDEGLVPSPEEEIKR 1604
+IH+ L P P P L N + M+ +RSISL Q M DEGL+PS EE KR
Sbjct: 127 IIHRFLLPPPPLLPSPSTVLLPIPFNQSLFFTMDNQRSISLLQFMVDEGLLPSAAEEDKR 186
Query: 1603 RNAIHKLKQIVKEWVKTVAIRRALPKRFLRFASGTILTYGSYGLGV 1466
+N I KLKQ+V WVK VA LP+ + S T++TYGSYGLGV
Sbjct: 187 KNVIRKLKQVVSSWVKKVACLHQLPEHQIAVTSATVITYGSYGLGV 232
>ref|XP_002311376.2| hypothetical protein POPTR_0008s10210g [Populus trichocarpa]
gi|550332775|gb|EEE88743.2| hypothetical protein
POPTR_0008s10210g [Populus trichocarpa]
Length = 495
Score = 278 bits (710), Expect(2) = 4e-88
Identities = 136/224 (60%), Positives = 167/224 (74%), Gaps = 1/224 (0%)
Frame = -3
Query: 1148 HNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGISI 969
H+ ESDIDALCVGP FATIA+DFFIVLHN+L SRPE+S+IHCVK +KVPLM FDGIS+
Sbjct: 75 HDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGISV 134
Query: 968 DLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLCC 789
DLPYAQL+V+++PENVD+ N L NID+ S K LSGVRAN+RIL LVPN+ FQ++L C
Sbjct: 135 DLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSMLRC 194
Query: 788 VNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPVV 609
+ LWAK+RGVYGNL GF GGVHL V +AF+CQ P +WPWPTPV+
Sbjct: 195 LKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTPVM 254
Query: 608 LQDGYAWPFIPVDKVS-WMPIQLPCSPYGFWHANIVRSTF*KSR 480
LQDG + V + +MPI+LPCSPY + H+N+ +STF K R
Sbjct: 255 LQDGMSSNVEDVIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIR 298
Score = 76.6 bits (187), Expect(2) = 4e-88
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNI--LLEPFPYPRIYGKFVKIFLSASDKDELDDWVGC 316
KI+ EF RGH +T+D+L+ D ++ + EPFPY Y +FVKI+LSA D+DEL DWVG
Sbjct: 296 KIRAEFLRGHSMTRDLLKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGW 355
Query: 315 VKSRFAA*LSK 283
VKS F L K
Sbjct: 356 VKSHFRCLLLK 366
Score = 84.7 bits (208), Expect = 1e-13
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = -1
Query: 1687 MEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRFA 1508
ME ERS+SL ++M +EGL PSPEE+ KR+ + KLK IV W K VA +R LPK+ +
Sbjct: 1 MEDERSLSLLKLMVNEGLFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAAT 60
Query: 1507 SGTILTYGSYGLG 1469
S TILTYGSYGLG
Sbjct: 61 SATILTYGSYGLG 73
>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide
adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
Length = 507
Score = 256 bits (653), Expect(2) = 9e-83
Identities = 130/223 (58%), Positives = 160/223 (71%), Gaps = 1/223 (0%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
V+ SESDIDALC+GP FA+I++DFFI L +ML SR EVS++HCVK AKVPL+ KFDGI
Sbjct: 88 VYGSESDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDAKVPLIRFKFDGIL 147
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
+DLPYAQLRV+SIP NVDV NPFFL++ID+ S K LSGVRAN+ ILQLVP++E+FQ++L
Sbjct: 148 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLR 207
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
CV LWAK+RGVYGNL GF GGVH+ + +AF+C W WPTPV
Sbjct: 208 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFAHWQWPTPV 267
Query: 611 V-LQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*K 486
V L+D Y P MPIQLPC + + ++NI RSTF K
Sbjct: 268 VLLEDTYPATGAP---PGLMPIQLPCGSHQYCNSNITRSTFYK 307
Score = 80.9 bits (198), Expect(2) = 9e-83
Identities = 39/69 (56%), Positives = 47/69 (68%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI EF RGH LTKD L+P+F W L E +PY Y F KI LSA+++++L DWVG VK
Sbjct: 307 KIMAEFLRGHNLTKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVK 366
Query: 309 SRFAA*LSK 283
SRF LSK
Sbjct: 367 SRFRCLLSK 375
Score = 75.1 bits (183), Expect = 1e-10
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = -1
Query: 1687 MEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRFA 1508
ME SISL Q+M +EGL+PS E++ KRR I+KL++IV WVK VA + LP+ +
Sbjct: 15 MEDGSSISLRQLMVNEGLIPSLEDQEKRRVVINKLRKIVVRWVKNVAWQHRLPQNQIDAT 74
Query: 1507 SGTILTYGSYGLGV 1466
+ TIL YGSYGLGV
Sbjct: 75 NATILPYGSYGLGV 88
>ref|XP_006299136.1| hypothetical protein CARUB_v10015278mg [Capsella rubella]
gi|482567845|gb|EOA32034.1| hypothetical protein
CARUB_v10015278mg [Capsella rubella]
Length = 500
Score = 251 bits (642), Expect(2) = 8e-81
Identities = 127/222 (57%), Positives = 159/222 (71%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
V+ SESDIDAL +GP FA++A+DFFI L +ML++R EVS++HCVK AKVPL+ KFDGI
Sbjct: 78 VYGSESDIDALLIGPFFASMAEDFFIGLRDMLITRREVSEVHCVKDAKVPLIRFKFDGIL 137
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
+DLPYAQLRV+S+P NVDV NPFFL++ID+ S K LSGVRAN+ ILQLVP++E+FQ++L
Sbjct: 138 VDLPYAQLRVLSVPHNVDVLNPFFLRDIDETSWKSLSGVRANKFILQLVPSLELFQSLLR 197
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
CV LWAK+RGVYGNL GF GGVH+ V +AF+C W WP PV
Sbjct: 198 CVKLWAKRRGVYGNLNGFLGGVHMAVLAAFVCGYERNATLSSLLANFFNTFAHWQWPIPV 257
Query: 611 VLQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*K 486
+L D +P MPIQLPC P+ F ++NI RSTF K
Sbjct: 258 MLLDD-TYP-ATGSPPGLMPIQLPCGPHQFCNSNITRSTFYK 297
Score = 78.6 bits (192), Expect(2) = 8e-81
Identities = 37/69 (53%), Positives = 46/69 (66%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI EF RGH +TKD L P+F W L EP+PY Y F KI LSA+++++L +WVG VK
Sbjct: 297 KIMAEFLRGHNVTKDYLNPNFSWKNLFEPYPYANTYTWFTKIHLSAANQEDLSNWVGWVK 356
Query: 309 SRFAA*LSK 283
SRF L K
Sbjct: 357 SRFRCLLLK 365
Score = 78.2 bits (191), Expect = 1e-11
Identities = 39/75 (52%), Positives = 53/75 (70%)
Frame = -1
Query: 1690 RMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRF 1511
++E E SISL Q+M +EG++PS E+ KRR I +L+ IV WVKTVA +R LP+ +
Sbjct: 4 KLEDEPSISLRQLMANEGIIPSLEDREKRRVVIDRLRMIVVRWVKTVAWKRRLPQHQIDA 63
Query: 1510 ASGTILTYGSYGLGV 1466
+ TI+ YGSYGLGV
Sbjct: 64 TNATIIAYGSYGLGV 78
>gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 257 bits (657), Expect(2) = 2e-80
Identities = 132/223 (59%), Positives = 161/223 (72%), Gaps = 1/223 (0%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
V+ SESDIDALC+GP FA+IA+DFFI L +ML SR EVS++HCVK AKVPL+ KFDGI
Sbjct: 62 VYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGIL 121
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
+DLPYAQLRV+SIP NVDV NPFFL++ID+ S K LSGVRAN+ ILQLVP++E+FQ++L
Sbjct: 122 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLR 181
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
CV LWAK+RGVYGNL GF GGVH+ + +AF+C P LW WPTPV
Sbjct: 182 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPTPV 241
Query: 611 V-LQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*K 486
V L+D Y P MPIQLPC + + ++ I RSTF K
Sbjct: 242 VLLEDTYPSTGAP---PGLMPIQLPCGSHQYCNSTITRSTFYK 281
Score = 71.6 bits (174), Expect(2) = 2e-80
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI EF GH LTKD L+ +F W L E +PY Y F KI LSA+++++L DWVG VK
Sbjct: 281 KIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVK 340
Query: 309 SRFAA*LSK 283
SRF L K
Sbjct: 341 SRFRCLLIK 349
Score = 68.9 bits (167), Expect = 8e-09
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = -1
Query: 1651 MGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRFASGTILTYGSYGL 1472
M +EGL+PS E+E+KRR I++L++IV WVK VA + LP+ + + TIL YGSYGL
Sbjct: 1 MVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGL 60
Query: 1471 GV 1466
GV
Sbjct: 61 GV 62
>ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase
[Arabidopsis thaliana] gi|332640894|gb|AEE74415.1|
poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 256 bits (653), Expect(2) = 5e-80
Identities = 131/223 (58%), Positives = 160/223 (71%), Gaps = 1/223 (0%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
V+ SESDIDALC+GP FA+IA+DFFI L +ML SR EVS++HCVK AKVPL+ KFDGI
Sbjct: 86 VYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGIL 145
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
+DLPYAQLRV+SIP NVDV NPFFL++ID+ S K LSGVRAN+ ILQLVP++E+FQ++L
Sbjct: 146 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLR 205
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
CV LWAK+RGVYGNL GF GGVH+ + +AF+C P W WPTPV
Sbjct: 206 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPV 265
Query: 611 V-LQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*K 486
V L+D Y P MPIQLPC + + ++ I RSTF K
Sbjct: 266 VLLEDTYPSTGAP---PGLMPIQLPCGSHQYCNSTITRSTFYK 305
Score = 71.6 bits (174), Expect(2) = 5e-80
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI EF GH LTKD L+ +F W L E +PY Y F KI LSA+++++L DWVG VK
Sbjct: 305 KIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVK 364
Query: 309 SRFAA*LSK 283
SRF L K
Sbjct: 365 SRFRCLLIK 373
Score = 78.2 bits (191), Expect = 1e-11
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = -1
Query: 1678 ERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRFASGT 1499
E SISL Q+M +EGL+PS E+E+KRR I++L++IV WVK VA + LP+ + + T
Sbjct: 16 ESSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNAT 75
Query: 1498 ILTYGSYGLGV 1466
IL YGSYGLGV
Sbjct: 76 ILPYGSYGLGV 86
>gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 250 bits (639), Expect(2) = 2e-78
Identities = 131/223 (58%), Positives = 159/223 (71%), Gaps = 1/223 (0%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
V+ SESDIDALC+GP FA+IAD FFI L +ML SR EVS++HCVK AKVPL+ KFDGI
Sbjct: 62 VYGSESDIDALCIGPFFASIAD-FFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGIL 120
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
+DLPYAQLRV+SIP NVDV NPFFL++ID+ S K LSGVRAN+ ILQLVP++E+FQ++L
Sbjct: 121 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLR 180
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
CV LWAK+RGVYGNL GF GGVH+ + +AF+C P W WPTPV
Sbjct: 181 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPV 240
Query: 611 V-LQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*K 486
V L+D Y P MPIQLPC + + ++ I RSTF K
Sbjct: 241 VLLEDTYPSTGAP---PGLMPIQLPCGSHQYCNSTITRSTFYK 280
Score = 71.6 bits (174), Expect(2) = 2e-78
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KI EF GH LTKD L+ +F W L E +PY Y F KI LSA+++++L DWVG VK
Sbjct: 280 KIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVK 339
Query: 309 SRFAA*LSK 283
SRF L K
Sbjct: 340 SRFRCLLIK 348
Score = 68.9 bits (167), Expect = 8e-09
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = -1
Query: 1651 MGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRFASGTILTYGSYGL 1472
M +EGL+PS E+E+KRR I++L++IV WVK VA + LP+ + + TIL YGSYGL
Sbjct: 1 MVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGL 60
Query: 1471 GV 1466
GV
Sbjct: 61 GV 62
>ref|XP_004503248.1| PREDICTED: poly(A) polymerase-like [Cicer arietinum]
Length = 485
Score = 280 bits (717), Expect = 1e-72
Identities = 137/222 (61%), Positives = 163/222 (73%), Gaps = 1/222 (0%)
Frame = -3
Query: 1154 QVHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGI 975
+VH S SDIDALCV P FA+IA+DFF++LH +L +RPEVS IHCVK AKVPLM KFDGI
Sbjct: 86 RVHTSVSDIDALCVAPFFASIAEDFFVLLHRILKTRPEVSQIHCVKTAKVPLMRFKFDGI 145
Query: 974 SIDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVL 795
SIDLPYA+L V+ +PENVD+ NPFF++NIDD S + LSGVRAN+RILQLVPNVE FQ L
Sbjct: 146 SIDLPYARLNVLYVPENVDILNPFFMRNIDDTSWRSLSGVRANKRILQLVPNVENFQYTL 205
Query: 794 CCVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTP 615
C+ LWAK+RGVYG LLG+ GGVHL V +A++CQRHP W WPTP
Sbjct: 206 RCLKLWAKRRGVYGTLLGYLGGVHLAVLAAYVCQRHPDATLNALIVNFFRIFAFWRWPTP 265
Query: 614 VVLQDGYAWPFIPV-DKVSWMPIQLPCSPYGFWHANIVRSTF 492
V+LQ+G + V D S MPI LP PY + H+NI RSTF
Sbjct: 266 VILQEGMLLTTVDVIDTRSCMPIWLPSGPYEYCHSNITRSTF 307
Score = 94.0 bits (232), Expect = 2e-16
Identities = 46/74 (62%), Positives = 54/74 (72%)
Frame = -1
Query: 1687 MEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRFA 1508
M+ +RS+SL Q +GDEGLVPSP+EE KR+N I LKQIV W+K VA R LPK +
Sbjct: 14 MDNQRSMSLLQFIGDEGLVPSPQEEQKRKNVIDSLKQIVSSWIKEVARRHRLPKHHIDLT 73
Query: 1507 SGTILTYGSYGLGV 1466
S TILTYGSYGL V
Sbjct: 74 SATILTYGSYGLRV 87
Score = 89.7 bits (221), Expect = 5e-15
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
Frame = -2
Query: 534 PIWILA--CKHCQKYILK-----IKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGK 376
PIW+ + ++C I + IK EF RGH++T+D+L+ DF W+ + EPFPY +IY +
Sbjct: 287 PIWLPSGPYEYCHSNITRSTFYRIKAEFMRGHIMTRDILKTDFHWDNIFEPFPYSKIYSR 346
Query: 375 FVKIFLSASDKDELDDWVGCVKSRF 301
FVKI+LS D+ +L DWVG VKSRF
Sbjct: 347 FVKIYLSTPDQCQLGDWVGWVKSRF 371
>gb|EOY06786.1| Poly(A) polymerase, putative isoform 1 [Theobroma cacao]
Length = 555
Score = 276 bits (707), Expect = 2e-71
Identities = 134/225 (59%), Positives = 168/225 (74%), Gaps = 1/225 (0%)
Frame = -3
Query: 1151 VHNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGIS 972
VH ESDIDALC+GP FAT+A+DFF+VL++ML SRPEVS+IHCV+ AKVPLM KFDGIS
Sbjct: 74 VHGPESDIDALCIGPYFATMAEDFFVVLYSMLKSRPEVSEIHCVQDAKVPLMRFKFDGIS 133
Query: 971 IDLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLC 792
+DLPY +L+V+++ ENVD+FNPFFL +I + K LSGVRAN+RI QLVPN+E FQ++L
Sbjct: 134 MDLPYTRLKVLAVTENVDIFNPFFLSDIGETGWKSLSGVRANKRICQLVPNLEKFQSMLR 193
Query: 791 CVNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPV 612
CV LWAK+RGVYGNL GF GGVHL + +AF+CQ P LWPWPTPV
Sbjct: 194 CVKLWAKRRGVYGNLNGFLGGVHLAILAAFVCQCDPNASLSALISNFFKTFALWPWPTPV 253
Query: 611 VLQDGYAWPFI-PVDKVSWMPIQLPCSPYGFWHANIVRSTF*KSR 480
VL+DG + I P + +MPI+LPC+PY + NI ++TF K R
Sbjct: 254 VLRDGMSQHTINPTETQLFMPIRLPCNPYEYCRCNITKNTFYKIR 298
Score = 88.2 bits (217), Expect = 1e-14
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -1
Query: 1687 MEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVKTVAIRRALPKRFLRFA 1508
ME ERS S+ Q+M EGLVPSPEEE KR+N + +LK+IV WVK VA +R LP++ +
Sbjct: 1 MEDERSRSILQLMVKEGLVPSPEEEEKRKNVVEQLKKIVMAWVKRVAWQRLLPRQDIAAT 60
Query: 1507 SGTILTYGSYGLGV 1466
S T+LTYGSY LGV
Sbjct: 61 SATVLTYGSYALGV 74
Score = 84.3 bits (207), Expect = 2e-13
Identities = 41/72 (56%), Positives = 51/72 (70%)
Frame = -2
Query: 516 CKHCQKYILKIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDE 337
C + KI+ E RGH LTKD+L+ DFD +LEPFPY + Y +FVKIF+SAS +DE
Sbjct: 287 CNITKNTFYKIRAELLRGHNLTKDLLKSDFD--NILEPFPYTQTYTRFVKIFVSASKQDE 344
Query: 336 LDDWVGCVKSRF 301
L DWVG +KSRF
Sbjct: 345 LGDWVGWIKSRF 356
>ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 219 bits (558), Expect(2) = 7e-68
Identities = 106/221 (47%), Positives = 143/221 (64%)
Frame = -3
Query: 1148 HNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGISI 969
+ ESDIDA+CVGPC A++ FF+VL ML RPEVSD+H ++ A+VPLM KF+G+S+
Sbjct: 142 YGPESDIDAVCVGPCVASLQHHFFVVLRQMLEERPEVSDLHSIESARVPLMRFKFNGVSV 201
Query: 968 DLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLCC 789
D PY QL VI+ E + F+P L+ +D S + LSGVR NR+I+QLVPN++ FQ +L C
Sbjct: 202 DFPYVQLPVINAAEAIRAFDPRLLEKVDGASWRCLSGVRVNRQIMQLVPNMKRFQVLLRC 261
Query: 788 VNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPVV 609
+ LWA+KRG+Y +L+G+F G+HL V A++C+RHP WPWP PV
Sbjct: 262 LKLWARKRGIYCHLVGYFAGIHLAVLGAYVCRRHPNASVNTLFSMFFDIFSHWPWPLPVA 321
Query: 608 LQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*K 486
L D P D S MPI +PC P F ++I +STF K
Sbjct: 322 LHD--QAPLWGPDGCSLMPIVMPCFPPEFCASSITKSTFNK 360
Score = 67.8 bits (164), Expect(2) = 7e-68
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KIK E RRG LTKD+ D DW + P+PY Y F+ + LSA +EL DWVG VK
Sbjct: 360 KIKEELRRGFALTKDIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTTEELRDWVGWVK 419
Query: 309 SRF 301
SRF
Sbjct: 420 SRF 422
Score = 64.3 bits (155), Expect = 2e-07
Identities = 34/89 (38%), Positives = 54/89 (60%)
Frame = -1
Query: 1735 PPGALGFRGNPDVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHKLKQIVKEWVK 1556
PP + R +P + M++ RS+SL + + G+VPS EEE +R + +L +IV +W K
Sbjct: 55 PPRPIILRLDPATTVHMDVVRSVSLLKFIAGAGVVPSQEEEQRREEVVRELDKIVMDWAK 114
Query: 1555 TVAIRRALPKRFLRFASGTILTYGSYGLG 1469
VA + K ++ +GT+LT+GSY LG
Sbjct: 115 QVAYDQR-DKHWI--TTGTVLTFGSYALG 140
>ref|XP_004984590.1| PREDICTED: poly(A) polymerase-like isoform X1 [Setaria italica]
Length = 535
Score = 213 bits (541), Expect(2) = 9e-68
Identities = 107/221 (48%), Positives = 142/221 (64%)
Frame = -3
Query: 1148 HNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGISI 969
+ ESDID LCVGP A++ FF+VL +ML RPEVS++H ++GAKVPLM KF+GI +
Sbjct: 139 YGPESDIDVLCVGPYIASLQHHFFVVLRHMLEGRPEVSELHSIEGAKVPLMRFKFNGILV 198
Query: 968 DLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLCC 789
D PY QL VI+ E + F+P L+N+D S K LSGVR NR+I+QLVPN++ FQ +L C
Sbjct: 199 DFPYVQLPVINAAEAIHAFDPRVLENVDGASWKCLSGVRVNRQIIQLVPNMKKFQYLLRC 258
Query: 788 VNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPVV 609
+ LWA+KRG++ +LLGFF G+HL + +A++C+RHP WPWP PV
Sbjct: 259 LKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINSLLSLFFEIFVHWPWPLPVS 318
Query: 608 LQDGYAWPFIPVDKVSWMPIQLPCSPYGFWHANIVRSTF*K 486
L + A D S MPI LPC P F ++ STF K
Sbjct: 319 LLEPPAL-CRGADGCSLMPIMLPCIPQEFCSSSTTESTFSK 358
Score = 73.9 bits (180), Expect(2) = 9e-68
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KIK E RRG+ LTKD DFDW+ L PFPY Y F++I LSA +EL DWVG VK
Sbjct: 358 KIKEELRRGYALTKDTRTTDFDWSWLFAPFPYGARYKCFLRIVLSAPMAEELRDWVGWVK 417
Query: 309 SRF 301
SRF
Sbjct: 418 SRF 420
Score = 60.5 bits (145), Expect = 3e-06
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Frame = -1
Query: 1750 LSQPFPPGALGFRGNP-----DVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAIHK 1586
L P PPG L R P +V++ M+ RS SL + + D +VPS E+E +R +H+
Sbjct: 42 LPGPPPPGVLLPRPIPMPLTREVMVHMDECRSRSLLKFISDAAIVPSLEDEQRRERVVHE 101
Query: 1585 LKQIVKEWVKTVAIRRALPKRFLRFASGTILTYGSYGLG 1469
L +IV +W K VA + + S +LT+GSY LG
Sbjct: 102 LGKIVMDWAKRVAYEQG---KHHWITSAAVLTFGSYALG 137
>ref|NP_001152292.1| LOC100285931 [Zea mays] gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 219 bits (557), Expect(2) = 2e-67
Identities = 109/224 (48%), Positives = 145/224 (64%), Gaps = 3/224 (1%)
Frame = -3
Query: 1148 HNSESDIDALCVGPCFATIADDFFIVLHNMLVSRPEVSDIHCVKGAKVPLMGSKFDGISI 969
+ ESDID LC+GPC A++ FF+VL ML RPEVS++H ++GAKVPLM KF+GI +
Sbjct: 139 YGPESDIDVLCIGPCIASLQHHFFVVLRQMLEGRPEVSELHSIEGAKVPLMRFKFNGILV 198
Query: 968 DLPYAQLRVISIPENVDVFNPFFLKNIDDMS*KGLSGVRANRRILQLVPNVEIFQAVLCC 789
D PY QL VI+ E + F+P L+N+D S + LSGVRANR+I+QLVPN++ FQ +L C
Sbjct: 199 DFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRC 258
Query: 788 VNLWAKKRGVYGNLLGFFGGVHLTVFSAFICQRHPKXXXXXXXXXXXXXXXLWPWPTPVV 609
+ LWA+KRG++ +LLGFF G+HL + +A++C+RHP WPWP PV
Sbjct: 259 LKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPVS 318
Query: 608 LQDGYAWPFIPV---DKVSWMPIQLPCSPYGFWHANIVRSTF*K 486
L D P +P D S MPI LPC P F ++ STF K
Sbjct: 319 LLD----PPVPCRGPDGCSLMPIMLPCIPPEFCSSSTTESTFSK 358
Score = 67.0 bits (162), Expect(2) = 2e-67
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = -2
Query: 489 KIKTEFRRGHMLTKDMLRPDFDWNILLEPFPYPRIYGKFVKIFLSASDKDELDDWVGCVK 310
KIK E RG+ L+KD DF+W+ L PFPY Y F++I LSA +EL DWVG VK
Sbjct: 358 KIKEELWRGYALSKDTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGEELRDWVGWVK 417
Query: 309 SRF 301
SRF
Sbjct: 418 SRF 420
Score = 60.1 bits (144), Expect = 4e-06
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Frame = -1
Query: 1750 LSQPFPPGALGFRGNP-------DVILRMEMERSISLFQMMGDEGLVPSPEEEIKRRNAI 1592
L P PPG L +P +VI+ M+ RS SL + + D G+VPS E+E +R +
Sbjct: 42 LPGPPPPGTL--LPHPMHMALPREVIIYMDECRSRSLLKFISDAGIVPSLEDERRRERVV 99
Query: 1591 HKLKQIVKEWVKTVAIRRALPKRFLRFASGTILTYGSYGLG 1469
+L +IV +W K VA + + AS T+LT+GSY LG
Sbjct: 100 RELGKIVMDWAKRVAYEQG---NWHWIASATVLTFGSYALG 137