BLASTX nr result
ID: Atropa21_contig00009061
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00009061
(533 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004249874.1| PREDICTED: U6 snRNA-associated Sm-like prote... 178 8e-43
ref|XP_002300922.2| hypothetical protein POPTR_0002s06940g [Popu... 174 1e-41
gb|EMT26424.1| hypothetical protein F775_30226 [Aegilops tauschii] 172 3e-41
gb|EMS52648.1| hypothetical protein TRIUR3_07508 [Triticum urartu] 172 3e-41
ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like prote... 172 3e-41
dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare] 172 3e-41
gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [T... 172 4e-41
ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus tri... 172 4e-41
gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis] 172 6e-41
ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citr... 172 6e-41
ref|XP_006645076.1| PREDICTED: U6 snRNA-associated Sm-like prote... 171 7e-41
ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group] g... 171 7e-41
ref|XP_004970703.1| PREDICTED: U6 snRNA-associated Sm-like prote... 171 9e-41
ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like prote... 171 9e-41
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380... 171 9e-41
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin... 171 9e-41
ref|XP_002458821.1| hypothetical protein SORBIDRAFT_03g040930 [S... 171 9e-41
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me... 171 9e-41
emb|CBH32569.1| U6 snRNA-associated Sm-like protein, expressed [... 171 1e-40
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis... 171 1e-40
>ref|XP_004249874.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
[Solanum lycopersicum] gi|565368784|ref|XP_006351021.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Solanum tuberosum]
Length = 97
Score = 178 bits (451), Expect = 8e-43
Identities = 90/90 (100%), Positives = 90/90 (100%)
Frame = -3
Query: 531 TVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE 352
TVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE
Sbjct: 8 TVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYE 67
Query: 351 EIVRATRRTIPFLFVRGDGVILVSPPLRTT 262
EIVRATRRTIPFLFVRGDGVILVSPPLRTT
Sbjct: 68 EIVRATRRTIPFLFVRGDGVILVSPPLRTT 97
>ref|XP_002300922.2| hypothetical protein POPTR_0002s06940g [Populus trichocarpa]
gi|550344440|gb|EEE80195.2| hypothetical protein
POPTR_0002s06940g [Populus trichocarpa]
Length = 133
Score = 174 bits (440), Expect = 1e-41
Identities = 87/88 (98%), Positives = 88/88 (100%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 45 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 104
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVRATRRT+PFLFVRGDGVILVSPPLRT
Sbjct: 105 IVRATRRTVPFLFVRGDGVILVSPPLRT 132
>gb|EMT26424.1| hypothetical protein F775_30226 [Aegilops tauschii]
Length = 285
Score = 172 bits (437), Expect = 3e-41
Identities = 87/88 (98%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRRTIPFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTRRTIPFLFVRGDGVILVSPPLRT 97
>gb|EMS52648.1| hypothetical protein TRIUR3_07508 [Triticum urartu]
Length = 98
Score = 172 bits (437), Expect = 3e-41
Identities = 87/88 (98%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRRTIPFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTRRTIPFLFVRGDGVILVSPPLRT 97
>ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 1
[Brachypodium distachyon]
Length = 98
Score = 172 bits (437), Expect = 3e-41
Identities = 87/88 (98%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRRTIPFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTRRTIPFLFVRGDGVILVSPPLRT 97
>dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 121
Score = 172 bits (437), Expect = 3e-41
Identities = 87/88 (98%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 33 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 92
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRRTIPFLFVRGDGVILVSPPLRT
Sbjct: 93 IVRTTRRTIPFLFVRGDGVILVSPPLRT 120
>gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 97
Score = 172 bits (436), Expect = 4e-41
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 9 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 68
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRRT+PFLFVRGDGVILVSPPLRT
Sbjct: 69 IVRTTRRTVPFLFVRGDGVILVSPPLRT 96
>ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|359493111|ref|XP_002266320.2| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like isoform 1
[Vitis vinifera] gi|222856945|gb|EEE94492.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 97
Score = 172 bits (436), Expect = 4e-41
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 9 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 68
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRRT+PFLFVRGDGVILVSPPLRT
Sbjct: 69 IVRTTRRTVPFLFVRGDGVILVSPPLRT 96
>gb|EXC25394.1| hypothetical protein L484_016776 [Morus notabilis]
Length = 98
Score = 172 bits (435), Expect = 6e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE+VTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRRT+PFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTRRTVPFLFVRGDGVILVSPPLRT 97
>ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citrus clementina]
gi|568838092|ref|XP_006473051.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm3-like [Citrus
sinensis] gi|557536575|gb|ESR47693.1| hypothetical
protein CICLE_v10002950mg [Citrus clementina]
Length = 97
Score = 172 bits (435), Expect = 6e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE+VTTVEIDDETYEE
Sbjct: 9 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEE 68
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRRT+PFLFVRGDGVILVSPPLRT
Sbjct: 69 IVRTTRRTVPFLFVRGDGVILVSPPLRT 96
>ref|XP_006645076.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Oryza
brachyantha]
Length = 105
Score = 171 bits (434), Expect = 7e-41
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 17 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 76
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RTIPFLFVRGDGVILVSPPLRT
Sbjct: 77 IVRTTKRTIPFLFVRGDGVILVSPPLRT 104
>ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group]
gi|56785201|dbj|BAD81919.1| small nuclear
ribonucleoprotein-like [Oryza sativa Japonica Group]
gi|113534440|dbj|BAF06823.1| Os01g0866700 [Oryza sativa
Japonica Group] gi|125528497|gb|EAY76611.1| hypothetical
protein OsI_04561 [Oryza sativa Indica Group]
gi|125572761|gb|EAZ14276.1| hypothetical protein
OsJ_04201 [Oryza sativa Japonica Group]
gi|215708805|dbj|BAG94074.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765758|dbj|BAG87455.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 104
Score = 171 bits (434), Expect = 7e-41
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 16 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 75
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RTIPFLFVRGDGVILVSPPLRT
Sbjct: 76 IVRTTKRTIPFLFVRGDGVILVSPPLRT 103
>ref|XP_004970703.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Setaria
italica]
Length = 98
Score = 171 bits (433), Expect = 9e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE+VTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RTIPFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTKRTIPFLFVRGDGVILVSPPLRT 97
>ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cicer
arietinum]
Length = 98
Score = 171 bits (433), Expect = 9e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTKRTVPFLFVRGDGVILVSPPLRT 97
>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
[Lotus japonicus]
Length = 97
Score = 171 bits (433), Expect = 9e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 9 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 68
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 69 IVRTTKRTVPFLFVRGDGVILVSPPLRT 96
>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
gi|255626487|gb|ACU13588.1| unknown [Glycine max]
Length = 97
Score = 171 bits (433), Expect = 9e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 9 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 68
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 69 IVRTTKRTVPFLFVRGDGVILVSPPLRT 96
>ref|XP_002458821.1| hypothetical protein SORBIDRAFT_03g040930 [Sorghum bicolor]
gi|194699902|gb|ACF84035.1| unknown [Zea mays]
gi|195628156|gb|ACG35908.1| U6 snRNA-associated Sm-like
protein LSm3 [Zea mays] gi|195643108|gb|ACG41022.1| U6
snRNA-associated Sm-like protein LSm3 [Zea mays]
gi|241930796|gb|EES03941.1| hypothetical protein
SORBIDRAFT_03g040930 [Sorghum bicolor]
Length = 98
Score = 171 bits (433), Expect = 9e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE+VTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RTIPFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTKRTIPFLFVRGDGVILVSPPLRT 97
>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
protein LSm3 [Medicago truncatula]
Length = 98
Score = 171 bits (433), Expect = 9e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTKRTVPFLFVRGDGVILVSPPLRT 97
>emb|CBH32569.1| U6 snRNA-associated Sm-like protein, expressed [Triticum aestivum]
Length = 98
Score = 171 bits (432), Expect = 1e-40
Identities = 86/88 (97%), Positives = 86/88 (97%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE
Sbjct: 10 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 69
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR TRR IPFLFVRGDGVILVSPPLRT
Sbjct: 70 IVRTTRRAIPFLFVRGDGVILVSPPLRT 97
>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
[Ricinus communis] gi|561025339|gb|ESW24024.1|
hypothetical protein PHAVU_004G095700g [Phaseolus
vulgaris]
Length = 97
Score = 171 bits (432), Expect = 1e-40
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = -3
Query: 528 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEE 349
VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE+VTTVEIDDETYEE
Sbjct: 9 VKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEE 68
Query: 348 IVRATRRTIPFLFVRGDGVILVSPPLRT 265
IVR T+RT+PFLFVRGDGVILVSPPLRT
Sbjct: 69 IVRTTKRTVPFLFVRGDGVILVSPPLRT 96