BLASTX nr result
ID: Atropa21_contig00009054
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00009054
(1048 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343513.1| PREDICTED: CHD3-type chromatin-remodeling fa... 312 7e-95
ref|XP_004244891.1| PREDICTED: CHD3-type chromatin-remodeling fa... 307 2e-93
ref|XP_006353661.1| PREDICTED: CHD3-type chromatin-remodeling fa... 228 4e-57
ref|XP_004241797.1| PREDICTED: CHD3-type chromatin-remodeling fa... 216 1e-53
ref|XP_006483455.1| PREDICTED: CHD3-type chromatin-remodeling fa... 177 5e-42
ref|XP_006450306.1| hypothetical protein CICLE_v10010331mg [Citr... 177 5e-42
ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa... 176 2e-41
emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera] 176 2e-41
emb|CBI21082.3| unnamed protein product [Vitis vinifera] 174 5e-41
ref|XP_002515445.1| chromodomain helicase DNA binding protein, p... 172 2e-40
ref|XP_002324903.2| GYMNOS family protein [Populus trichocarpa] ... 160 8e-37
ref|XP_004157094.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type ch... 156 1e-35
ref|XP_002309665.2| GYMNOS family protein [Populus trichocarpa] ... 155 2e-35
ref|XP_004145509.1| PREDICTED: CHD3-type chromatin-remodeling fa... 154 7e-35
ref|XP_003603311.1| Chromatin remodeling complex subunit [Medica... 146 2e-32
gb|ESW08957.1| hypothetical protein PHAVU_009G088700g [Phaseolus... 145 2e-32
ref|XP_004501371.1| PREDICTED: CHD3-type chromatin-remodeling fa... 145 2e-32
ref|XP_004501370.1| PREDICTED: CHD3-type chromatin-remodeling fa... 145 2e-32
gb|EXB38650.1| CHD3-type chromatin-remodeling factor PICKLE [Mor... 137 7e-30
gb|EOY29365.1| Chromatin remodeling factor CHD3 isoform 2 [Theob... 135 3e-29
>ref|XP_006343513.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
tuberosum]
Length = 1466
Score = 312 bits (800), Expect(3) = 7e-95
Identities = 157/179 (87%), Positives = 165/179 (92%), Gaps = 1/179 (0%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYH-FREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPN 872
DPSNR QV QDSSSLYH FREMQRRQVEFIKKRVLLLEKGLNAEYQKE F DEKSHELPN
Sbjct: 1206 DPSNR-QVIQDSSSLYHHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEAFDDEKSHELPN 1264
Query: 871 EEMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRM 692
E MVCDTKVVDEPNRNVEEANTEM DH PRLV IS QGISQVACDGKPDRL +AELYN+M
Sbjct: 1265 EGMVCDTKVVDEPNRNVEEANTEMTDHSPRLVAISPQGISQVACDGKPDRLSVAELYNKM 1324
Query: 691 CQVLSGNVQDSFNECHPSSGMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQEDQN 515
C VLSGNVQDSFNE HPS+GM+KNI+PLE+ICQQMNQILSSP Q+TPNFERKLVQED+N
Sbjct: 1325 CLVLSGNVQDSFNESHPSTGMRKNIVPLEAICQQMNQILSSPQQNTPNFERKLVQEDRN 1383
Score = 48.9 bits (115), Expect(3) = 7e-95
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -2
Query: 498 PVPSSQVDDRVLNAEKEYDXXXXXXXXXXXXXXSCTVASMTE 373
PVPSSQVDDRVLNAEKE+D SCTV SMTE
Sbjct: 1392 PVPSSQVDDRVLNAEKEHDSVLKKPESGSKSASSCTVGSMTE 1433
Score = 35.8 bits (81), Expect(3) = 7e-95
Identities = 23/37 (62%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = -3
Query: 368 QHRNVTPAEIPETRPI-LSTGEADIEMVDHTDIFTSN 261
++ NVTPA + ETRP +STG+ADIEMV DI TSN
Sbjct: 1433 ENHNVTPAVL-ETRPSSISTGDADIEMV---DISTSN 1465
>ref|XP_004244891.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
lycopersicum]
Length = 1463
Score = 307 bits (786), Expect(3) = 2e-93
Identities = 155/179 (86%), Positives = 162/179 (90%), Gaps = 1/179 (0%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYH-FREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPN 872
DPSNR QV QDSSSLYH +REMQR+QVEFIKKRVLLLEKGLNAEYQKE F DEKSHELPN
Sbjct: 1202 DPSNR-QVIQDSSSLYHHYREMQRKQVEFIKKRVLLLEKGLNAEYQKEAFDDEKSHELPN 1260
Query: 871 EEMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRM 692
E M CDTKVVDEPNRNVEEANTEM DH PRLV IS QGISQVACD KPDRL +AELYN+M
Sbjct: 1261 EGMACDTKVVDEPNRNVEEANTEMTDHSPRLVAISPQGISQVACDSKPDRLSVAELYNKM 1320
Query: 691 CQVLSGNVQDSFNECHPSSGMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQEDQN 515
C VLSGNVQDSFNE HPSSGMKKNILPLE+ICQQMNQILSSP Q+TPNF RKLVQED+N
Sbjct: 1321 CLVLSGNVQDSFNESHPSSGMKKNILPLEAICQQMNQILSSPQQNTPNFGRKLVQEDRN 1379
Score = 50.4 bits (119), Expect(3) = 2e-93
Identities = 27/42 (64%), Positives = 28/42 (66%)
Frame = -2
Query: 498 PVPSSQVDDRVLNAEKEYDXXXXXXXXXXXXXXSCTVASMTE 373
PVPSSQVDDRVLNAEKE+D SCTVASMTE
Sbjct: 1388 PVPSSQVDDRVLNAEKEHDSVLKKPESGSKSASSCTVASMTE 1429
Score = 34.7 bits (78), Expect(3) = 2e-93
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -3
Query: 374 SHQHRNVTPAEIPETRPI-LSTGEADIEMVDHTDIFTSN 261
+ H NVTPA + ETRP STG+ DIEMV DI TSN
Sbjct: 1428 TENHHNVTPAVL-ETRPSSTSTGDDDIEMV---DISTSN 1462
>ref|XP_006353661.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
tuberosum]
Length = 1473
Score = 228 bits (580), Expect = 4e-57
Identities = 111/179 (62%), Positives = 143/179 (79%), Gaps = 3/179 (1%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
DPSNR Q++QDSS LYHFREMQRRQVEFI+KRV+LLE +NAEYQ+EV G K HELP +
Sbjct: 1197 DPSNRTQLHQDSSLLYHFREMQRRQVEFIRKRVMLLENAINAEYQREVVGCGKPHELPGK 1256
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
EM CDTK+VDEP+R+VE A TEM+D+FP+L+ IS QGIS++ACDG+ DRL +A+LYN+MC
Sbjct: 1257 EMECDTKIVDEPSRSVEAAGTEMVDNFPKLIAISPQGISEIACDGEVDRLSVAQLYNKMC 1316
Query: 688 QVLSGNVQDSFN--ECHPSS-GMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQED 521
+VLS +DSFN P+S +K+N+LPLE+ Q+M ++LSS HQ+ N R +QED
Sbjct: 1317 KVLSDYGEDSFNAVASQPASLALKRNLLPLEAFFQEMKRVLSSAHQNPGNVPRSELQED 1375
>ref|XP_004241797.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
lycopersicum]
Length = 1442
Score = 216 bits (550), Expect = 1e-53
Identities = 107/179 (59%), Positives = 141/179 (78%), Gaps = 3/179 (1%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
DPSNR Q++QDSS LYHFREMQRRQVEFI+KRV+LLE +NAEYQ++V G K HELP +
Sbjct: 1194 DPSNRTQLHQDSSLLYHFREMQRRQVEFIRKRVMLLENAINAEYQRDVVGCGKPHELPGK 1253
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
EM DTK+VDE +R+VE A TEM+D+FP+L+ IS QGIS++ACDG+ DRL +A+LYN+MC
Sbjct: 1254 EMERDTKIVDELSRSVEAAGTEMVDNFPKLIAISPQGISEIACDGEVDRLSVAQLYNKMC 1313
Query: 688 QVLSGNVQDSFN--ECHPSS-GMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQED 521
+VLS + +DSFN P+S +K+N+LPLE+ Q+M ++LSS HQ+ N +QED
Sbjct: 1314 KVLSDSGEDSFNAVASQPASLALKRNLLPLEAFFQEMKRVLSSAHQNPGNAPGSELQED 1372
>ref|XP_006483455.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform
X1 [Citrus sinensis] gi|568859871|ref|XP_006483456.1|
PREDICTED: CHD3-type chromatin-remodeling factor
PICKLE-like isoform X2 [Citrus sinensis]
Length = 1462
Score = 177 bits (450), Expect = 5e-42
Identities = 93/182 (51%), Positives = 128/182 (70%), Gaps = 5/182 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDE-KSHELPN 872
D +N+ QVYQDSS LYHFR+MQRRQVEFIKKRVLLLEKGLNAEYQKE FGD+ KS+E+P+
Sbjct: 1172 DAANQAQVYQDSSVLYHFRDMQRRQVEFIKKRVLLLEKGLNAEYQKEYFGDDVKSNEIPS 1231
Query: 871 EEMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRM 692
EE + K + P+ E +++M+D P+L I+S+ IS ACD DRLG+A+ YN M
Sbjct: 1232 EEPESERKTTERPSPTSMEIDSQMVDQLPKLEAITSEEISAAACDSDADRLGLAQHYNEM 1291
Query: 691 CQVLSGNVQD----SFNECHPSSGMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQE 524
C+VL NV + S S+ ++ N+ LE++C+ +NQILS+ Q++P E+ + E
Sbjct: 1292 CKVLEENVHEVVKTSLTSQPASAQLRTNLQLLETLCEDVNQILST--QTSPPLEQPMPNE 1349
Query: 523 DQ 518
D+
Sbjct: 1350 DK 1351
>ref|XP_006450306.1| hypothetical protein CICLE_v10010331mg [Citrus clementina]
gi|557553532|gb|ESR63546.1| hypothetical protein
CICLE_v10010331mg [Citrus clementina]
Length = 1448
Score = 177 bits (450), Expect = 5e-42
Identities = 93/182 (51%), Positives = 128/182 (70%), Gaps = 5/182 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDE-KSHELPN 872
D +N+ QVYQDSS LYHFR+MQRRQVEFIKKRVLLLEKGLNAEYQKE FGD+ KS+E+P+
Sbjct: 1158 DAANQAQVYQDSSVLYHFRDMQRRQVEFIKKRVLLLEKGLNAEYQKEYFGDDVKSNEIPS 1217
Query: 871 EEMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRM 692
EE + K + P+ E +++M+D P+L I+S+ IS ACD DRLG+A+ YN M
Sbjct: 1218 EEPESERKTTERPSPTSMEIDSQMVDQLPKLEAITSEEISAAACDSDADRLGLAQHYNEM 1277
Query: 691 CQVLSGNVQD----SFNECHPSSGMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQE 524
C+VL NV + S S+ ++ N+ LE++C+ +NQILS+ Q++P E+ + E
Sbjct: 1278 CKVLEENVHEVVKTSLTSQPASAQLRTNLQLLETLCEDVNQILST--QTSPPLEQPMPNE 1335
Query: 523 DQ 518
D+
Sbjct: 1336 DK 1337
>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
vinifera]
Length = 1472
Score = 176 bits (445), Expect = 2e-41
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 4/181 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D SNR Q+YQDSS LYHFREMQRRQVEFIKKRVLLLEK LN EYQKE FGD KS+E+ +E
Sbjct: 1173 DASNRAQLYQDSSVLYHFREMQRRQVEFIKKRVLLLEKALNTEYQKEYFGDIKSNEIASE 1232
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
+ + KV+D + + E + +++D PR+ I+S+ IS ACD KP+R +A LYN MC
Sbjct: 1233 DPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMARLYNEMC 1292
Query: 688 QVLSGNVQDSFNEC---HPSS-GMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQED 521
+VL+ NV +S P+S ++K +LPLE+IC+ +N+ILS Q+ E+ L+ +
Sbjct: 1293 KVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQTLLGSN 1352
Query: 520 Q 518
Q
Sbjct: 1353 Q 1353
>emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]
Length = 755
Score = 176 bits (445), Expect = 2e-41
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 4/181 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D SNR Q+YQDSS LYHFREMQRRQVEFIKKRVLLLEK LN EYQKE FGD KS+E+ +E
Sbjct: 456 DASNRAQLYQDSSVLYHFREMQRRQVEFIKKRVLLLEKALNTEYQKEYFGDIKSNEIASE 515
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
+ + KV+D + + E + +++D PR+ I+S+ IS ACD KP+R +A LYN MC
Sbjct: 516 DPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMARLYNEMC 575
Query: 688 QVLSGNVQDSFNEC---HPSS-GMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQED 521
+VL+ NV +S P+S ++K +LPLE+IC+ +N+ILS Q+ E+ L+ +
Sbjct: 576 KVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQTLLGSN 635
Query: 520 Q 518
Q
Sbjct: 636 Q 636
>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
Length = 1356
Score = 174 bits (441), Expect = 5e-41
Identities = 92/177 (51%), Positives = 124/177 (70%), Gaps = 4/177 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D SNR Q+YQDSS LYHFREMQRRQVEFIKKRVLLLEK LN EYQKE FGD KS+E+ +E
Sbjct: 1173 DASNRAQLYQDSSVLYHFREMQRRQVEFIKKRVLLLEKALNTEYQKEYFGDIKSNEIASE 1232
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
+ + KV+D + + E + +++D PR+ I+S+ IS ACD KP+R +A LYN MC
Sbjct: 1233 DPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMARLYNEMC 1292
Query: 688 QVLSGNVQDSFNEC---HPSS-GMKKNILPLESICQQMNQILSSPHQSTPNFERKLV 530
+VL+ NV +S P+S ++K +LPLE+IC+ +N+ILS Q+ E+ L+
Sbjct: 1293 KVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQTLL 1349
>ref|XP_002515445.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis] gi|223545389|gb|EEF46894.1| chromodomain
helicase DNA binding protein, putative [Ricinus communis]
Length = 1470
Score = 172 bits (437), Expect = 2e-40
Identities = 92/181 (50%), Positives = 121/181 (66%), Gaps = 4/181 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D N+PQ+YQDS+ LYHFR+MQRRQVEFIKKRVLLLEKGLNAEYQKE F D KS+E+ E
Sbjct: 1172 DIGNQPQLYQDSNILYHFRDMQRRQVEFIKKRVLLLEKGLNAEYQKEYFDDSKSNEIATE 1231
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
E D K D N E + +MID P+ I+++ I A D PDRL + +LYN+MC
Sbjct: 1232 EPEGDIKAADGFNLGSTETDAQMIDQLPQTELITTEEILTAAYDDDPDRLELPQLYNKMC 1291
Query: 688 QVLSGNVQDSFNEC---HPSS-GMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQED 521
+L NVQ+S P+S +++ +LPLE+I QQ+NQILS P Q +P E+ + +
Sbjct: 1292 NILEQNVQESVQTSITNQPASLKLREGLLPLETISQQINQILSHPQQKSPVPEQNALDSN 1351
Query: 520 Q 518
+
Sbjct: 1352 E 1352
>ref|XP_002324903.2| GYMNOS family protein [Populus trichocarpa]
gi|550317867|gb|EEF03468.2| GYMNOS family protein
[Populus trichocarpa]
Length = 1442
Score = 160 bits (405), Expect = 8e-37
Identities = 84/175 (48%), Positives = 119/175 (68%), Gaps = 5/175 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVF-GDEKSHELPN 872
D +N+ Q+YQDSS L+HFR+MQRRQVEFIKKRVLLLE+GL AEYQKE F GD K++E+ +
Sbjct: 1158 DVANQAQLYQDSSILFHFRDMQRRQVEFIKKRVLLLERGLYAEYQKEYFGGDIKANEITS 1217
Query: 871 EEMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRM 692
EE C+T D + E + +MID PR+ +I+ + IS ACD PDRL + +LYN+M
Sbjct: 1218 EEADCETMAADRSSLGSIEISAQMIDQLPRMESIALEEISAAACDDNPDRLALPQLYNKM 1277
Query: 691 CQVLSGNVQDSFN---ECHPSS-GMKKNILPLESICQQMNQILSSPHQSTPNFER 539
C VL N+ +S P+S +++++ PLE++ +Q+NQ LS Q + E+
Sbjct: 1278 CTVLEQNIHESIQISLTNQPASLKLRQDLQPLETVYEQINQFLSPSQQKSSTSEQ 1332
>ref|XP_004157094.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type chromatin-remodeling factor
PICKLE-like [Cucumis sativus]
Length = 1474
Score = 156 bits (395), Expect = 1e-35
Identities = 81/163 (49%), Positives = 113/163 (69%), Gaps = 4/163 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D +N+ Q++QDSS YHFR+MQRRQVEF+KKRVLLLEKGLNAEYQKE FGD K +++ +E
Sbjct: 1175 DTANQSQLFQDSSIYYHFRDMQRRQVEFVKKRVLLLEKGLNAEYQKEYFGDSKGNDITSE 1234
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
++ ++KV + P + E +T+ D P++ ISS+ S ACD PDRL ++ LYN MC
Sbjct: 1235 DIENESKVSNLPGASTVETDTQKADQLPQVDPISSRETS-AACDDNPDRLELSRLYNEMC 1293
Query: 688 QVLSGN----VQDSFNECHPSSGMKKNILPLESICQQMNQILS 572
+V+ N V + H SS +K N+LPLE I + +++ILS
Sbjct: 1294 KVVDENCRELVHAATGSYHSSSDVKVNLLPLEKIIEDVDRILS 1336
>ref|XP_002309665.2| GYMNOS family protein [Populus trichocarpa]
gi|550337223|gb|EEE93188.2| GYMNOS family protein
[Populus trichocarpa]
Length = 1471
Score = 155 bits (393), Expect = 2e-35
Identities = 87/170 (51%), Positives = 112/170 (65%), Gaps = 5/170 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVF-GDEKSHELPN 872
D +N Y+DSS L+HFR+MQRRQVEFIKKRVLLLE+GLNAEYQK F GD K +E+ +
Sbjct: 1178 DAANPALSYRDSSILFHFRDMQRRQVEFIKKRVLLLERGLNAEYQKIYFGGDIKPNEITS 1237
Query: 871 EEMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRM 692
EE +TK D + E N +MID P++ I S+ IS ACD PDRL +AE YN+M
Sbjct: 1238 EEADGETKAADSSSLGSIEINAQMIDQLPQMEPIGSEEISAAACDDNPDRLALAEHYNKM 1297
Query: 691 CQVLSGNVQDSFN---ECHPSS-GMKKNILPLESICQQMNQILSSPHQST 554
C VL NV ++ HP+S +++ + PLE I +QMNQILS Q +
Sbjct: 1298 CTVLEQNVHETIQISLTNHPASLKLRQGLQPLEMIFEQMNQILSPLQQKS 1347
>ref|XP_004145509.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Cucumis
sativus]
Length = 1474
Score = 154 bits (388), Expect = 7e-35
Identities = 80/163 (49%), Positives = 112/163 (68%), Gaps = 4/163 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D +N+ Q++QDSS YHFR+MQRRQVEF+KKRVLLLEKGLNAEYQKE FGD K +++ +E
Sbjct: 1175 DTANQSQLFQDSSIYYHFRDMQRRQVEFVKKRVLLLEKGLNAEYQKEYFGDSKGNDITSE 1234
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
++ ++KV + P + E +T+ D P++ ISS+ S ACD PDRL ++ LYN MC
Sbjct: 1235 DIENESKVSNLPGASTVETDTQKADQLPQVDPISSRETS-AACDDNPDRLELSRLYNEMC 1293
Query: 688 QVLSGN----VQDSFNECHPSSGMKKNILPLESICQQMNQILS 572
+V+ N V + H SS +K N+LPL I + +++ILS
Sbjct: 1294 KVVDENCRELVHAATGSYHSSSDVKVNLLPLGKIIEDVDRILS 1336
>ref|XP_003603311.1| Chromatin remodeling complex subunit [Medicago truncatula]
gi|355492359|gb|AES73562.1| Chromatin remodeling complex
subunit [Medicago truncatula]
Length = 1483
Score = 146 bits (368), Expect = 2e-32
Identities = 82/180 (45%), Positives = 112/180 (62%), Gaps = 4/180 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D N+ Q+YQDSS LYHFR+MQRRQVEF+KKRVLLLEKGLNAEYQKE FGD K+ E+ NE
Sbjct: 1244 DAKNQTQLYQDSS-LYHFRDMQRRQVEFVKKRVLLLEKGLNAEYQKEYFGDPKAGEVTNE 1302
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
E+ + K P+ + +T+MID P++ I+ + +S V CD +RL + LYN MC
Sbjct: 1303 ELKSEPKSTTIPSFISVDTDTQMIDQLPQVEIIAPEDVS-VVCDSDSNRLELVRLYNEMC 1361
Query: 688 QVLSGNVQDSFNECHPSSGMKKNIL----PLESICQQMNQILSSPHQSTPNFERKLVQED 521
+V+ N D + N + PLE+IC+ +N+IL +P P E ++ D
Sbjct: 1362 KVVEENPMDLVQSSSAREPAEVNAVKKCPPLETICEDINRIL-TPTAEQPVAETPVLNSD 1420
>gb|ESW08957.1| hypothetical protein PHAVU_009G088700g [Phaseolus vulgaris]
gi|561010051|gb|ESW08958.1| hypothetical protein
PHAVU_009G088700g [Phaseolus vulgaris]
Length = 1420
Score = 145 bits (367), Expect = 2e-32
Identities = 83/169 (49%), Positives = 110/169 (65%), Gaps = 4/169 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D N+ Q+YQDSS LYHFR+MQRRQVEFIKKRVLLLEKGLNAEYQKE FGD KS N+
Sbjct: 1173 DARNQAQLYQDSSILYHFRDMQRRQVEFIKKRVLLLEKGLNAEYQKEYFGDPKS----ND 1228
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
E+ ++K + E +++ID P++ TI+S+ IS V CD P+RL + LYN MC
Sbjct: 1229 ELKSESKA-----PKLRENESQIIDQLPQVETIASEEISAV-CDSDPNRLELVRLYNEMC 1282
Query: 688 QVLSGN----VQDSFNECHPSSGMKKNILPLESICQQMNQILSSPHQST 554
+V+ N VQ S + KN PLE+IC+ +N+IL+ + +
Sbjct: 1283 KVVEENPMDLVQTSLARNPAELHVGKNFPPLETICKDINRILTPTQEQS 1331
>ref|XP_004501371.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform
X2 [Cicer arietinum]
Length = 1401
Score = 145 bits (367), Expect = 2e-32
Identities = 78/159 (49%), Positives = 106/159 (66%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D N+ Q+Y DSS LYHFR+MQRRQVEF+KKRVLLLEKG+NAEYQKE FGD K++E+ N+
Sbjct: 1170 DARNQTQLYPDSSMLYHFRDMQRRQVEFVKKRVLLLEKGVNAEYQKEYFGDPKANEVTND 1229
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
E+ P+ + +T+MID P++ TI+ + S VACD P+RL + ELYN MC
Sbjct: 1230 ELKTVPNATTNPSYKSGDTDTQMIDQLPQVETIAPEDAS-VACDSDPNRLKLVELYNEMC 1288
Query: 688 QVLSGNVQDSFNECHPSSGMKKNILPLESICQQMNQILS 572
+V+ N E + +KK + E ICQ +N+IL+
Sbjct: 1289 KVVEEN-PTLAREPEEVNAVKK-LPSFEIICQDINRILT 1325
>ref|XP_004501370.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform
X1 [Cicer arietinum]
Length = 1402
Score = 145 bits (367), Expect = 2e-32
Identities = 78/159 (49%), Positives = 106/159 (66%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D N+ Q+Y DSS LYHFR+MQRRQVEF+KKRVLLLEKG+NAEYQKE FGD K++E+ N+
Sbjct: 1171 DARNQTQLYPDSSMLYHFRDMQRRQVEFVKKRVLLLEKGVNAEYQKEYFGDPKANEVTND 1230
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
E+ P+ + +T+MID P++ TI+ + S VACD P+RL + ELYN MC
Sbjct: 1231 ELKTVPNATTNPSYKSGDTDTQMIDQLPQVETIAPEDAS-VACDSDPNRLKLVELYNEMC 1289
Query: 688 QVLSGNVQDSFNECHPSSGMKKNILPLESICQQMNQILS 572
+V+ N E + +KK + E ICQ +N+IL+
Sbjct: 1290 KVVEEN-PTLAREPEEVNAVKK-LPSFEIICQDINRILT 1326
>gb|EXB38650.1| CHD3-type chromatin-remodeling factor PICKLE [Morus notabilis]
Length = 2503
Score = 137 bits (345), Expect = 7e-30
Identities = 76/181 (41%), Positives = 110/181 (60%), Gaps = 4/181 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGD-EKSHELPN 872
DP N+ Q++QD S YH+R+MQRRQVE+IKKRVLLLEKGLNAEYQKE FGD +S+E+ N
Sbjct: 2223 DPGNQSQMFQDGSIYYHYRDMQRRQVEYIKKRVLLLEKGLNAEYQKEYFGDTARSNEVLN 2282
Query: 871 EEMVCDTKVVDEPN---RNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELY 701
EE + K + PN E + M+D PR+ TI+ + I+ ACD PDRL + LY
Sbjct: 2283 EEPENEPKASNVPNIPGPRSGENDACMVDQLPRVETITPEEIAASACDDNPDRLELPRLY 2342
Query: 700 NRMCQVLSGNVQDSFNECHPSSGMKKNILPLESICQQMNQILSSPHQSTPNFERKLVQED 521
N MC+++ E S N++ +++C M++ILS + + + + ++
Sbjct: 2343 NEMCKIV---------EETTSRNSANNLISFKAVCTDMSRILSPAPANATSAQPMEIPDE 2393
Query: 520 Q 518
Q
Sbjct: 2394 Q 2394
>gb|EOY29365.1| Chromatin remodeling factor CHD3 isoform 2 [Theobroma cacao]
Length = 1404
Score = 135 bits (340), Expect = 3e-29
Identities = 73/170 (42%), Positives = 107/170 (62%), Gaps = 4/170 (2%)
Frame = -1
Query: 1048 DPSNRPQVYQDSSSLYHFREMQRRQVEFIKKRVLLLEKGLNAEYQKEVFGDEKSHELPNE 869
D N+ Q+Y D +++Y FR++QRRQVE+IKKRVLLLEKG+NAEYQKE + K++E+ +E
Sbjct: 1176 DAVNQAQLYPDPAAMYQFRDLQRRQVEYIKKRVLLLEKGMNAEYQKEYEDELKANEMTSE 1235
Query: 868 EMVCDTKVVDEPNRNVEEANTEMIDHFPRLVTISSQGISQVACDGKPDRLGIAELYNRMC 689
E V D PN + E +++DH + I+S+ IS AC+ DRL + +N+MC
Sbjct: 1236 EPENGQNVADMPNASSTEIPFQVVDHLIPIEVIASEQISAAACNDDADRLELPLHFNKMC 1295
Query: 688 QVLSGNVQDSFNECHPSSGMKKNILPLESICQQMNQILSS----PHQSTP 551
++L GN ++ C S +K PLE IC+ +++ILS PH S P
Sbjct: 1296 KILEGNALEAV--C--SVNLKNKFSPLEEICEDISRILSPTQHYPHTSKP 1341