BLASTX nr result
ID: Atropa21_contig00008883
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00008883
(1087 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containi... 603 e-171
ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containi... 588 e-165
ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Popu... 375 e-101
ref|XP_002334407.1| predicted protein [Populus trichocarpa] 372 e-100
ref|XP_006386676.1| pentatricopeptide repeat-containing family p... 371 e-100
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,... 366 8e-99
gb|EOX95524.1| Pentatricopeptide repeat-containing protein, puta... 361 2e-97
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ... 361 3e-97
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi... 360 4e-97
ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutr... 359 9e-97
ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Caps... 357 6e-96
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana] 356 8e-96
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar... 356 8e-96
gb|EPS65453.1| hypothetical protein M569_09325, partial [Genlise... 350 6e-94
ref|XP_006491416.1| PREDICTED: pentatricopeptide repeat-containi... 345 1e-92
ref|XP_006444679.1| hypothetical protein CICLE_v10023806mg [Citr... 345 1e-92
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi... 343 5e-92
ref|XP_004308750.1| PREDICTED: pentatricopeptide repeat-containi... 337 5e-90
gb|EMJ21345.1| hypothetical protein PRUPE_ppa019625mg [Prunus pe... 319 1e-84
gb|EXC13626.1| hypothetical protein L484_019583 [Morus notabilis] 317 4e-84
>ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
isoform X1 [Solanum tuberosum]
Length = 816
Score = 603 bits (1554), Expect(2) = e-171
Identities = 300/350 (85%), Positives = 320/350 (91%)
Frame = -2
Query: 1086 SVSGATDAGTISPATAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILR 907
SV+GA G S A A+KVGNLLVVASIAKALI+PGGTRNLE+YGDSIPLSE+LVLQ+LR
Sbjct: 19 SVAGAAYTGKSSTAAASKVGNLLVVASIAKALIKPGGTRNLEQYGDSIPLSESLVLQVLR 78
Query: 906 RNNLDAARKLDFFKWCSLRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLL 727
RNNLDA +KLDFFKWCSLR +FKHS ETYSQ+F+SICYSHN R+ I +LLNSMKDD+VLL
Sbjct: 79 RNNLDAEKKLDFFKWCSLRPSFKHSTETYSQMFKSICYSHNHREAIFVLLNSMKDDKVLL 138
Query: 726 NSATFKLLLDSFTRTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLAL 547
N+ATFKLLLDSFTRTGNFD ALEILEFVE LDNSSCLSPDVYNSVLIALVQKNQVNLAL
Sbjct: 139 NAATFKLLLDSFTRTGNFDSALEILEFVEGDLDNSSCLSPDVYNSVLIALVQKNQVNLAL 198
Query: 546 SIFLKLLETNDGNSIGISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYN 367
SIFLKLLETNDGNSIG+SS V CNELL GLKR NMRAEFKQ FDKL G NVFP DRW YN
Sbjct: 199 SIFLKLLETNDGNSIGVSSAVACNELLVGLKRGNMRAEFKQVFDKLRGGNVFPFDRWGYN 258
Query: 366 ICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELK 187
ICIHTFGCWGDL++SLSLFKEMKERGSWFSPDLCTYNSLIHVL LLGKV DA VVWEELK
Sbjct: 259 ICIHTFGCWGDLSSSLSLFKEMKERGSWFSPDLCTYNSLIHVLCLLGKVKDAFVVWEELK 318
Query: 186 GSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
GSSGLEPDAYTYR VIQGC+KAY INDAIKVF+EMQYNGIRPDTIVYN+L
Sbjct: 319 GSSGLEPDAYTYRIVIQGCSKAYLINDAIKVFTEMQYNGIRPDTIVYNTL 368
Score = 26.6 bits (57), Expect(2) = e-171
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3
Query: 56 LLFITPSDGLLKARKLTD 3
+++ T DGLLKARKLTD
Sbjct: 363 IVYNTLLDGLLKARKLTD 380
Score = 58.9 bits (141), Expect = 3e-06
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = -2
Query: 405 GKNVFPLDRWEYNICIHTFGCWG--DLANSLSLFKEMKERGSWFSPDLCTYNSLIHVLWL 232
G+ V P D YN+ I G G DLA+++ L K MK+ G D+ YN+LI+ L
Sbjct: 671 GEKVCPSDVATYNVIIQGLGKMGRADLADAV-LDKLMKQGGYL---DIVMYNTLINALGK 726
Query: 231 LGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTI 52
G++ + +++++K +SG+ PD TY T+I+ AKA ++ + K M G P+ +
Sbjct: 727 AGRIEEVNKLFQQMK-NSGINPDVVTYNTLIEVHAKAGQLKQSYKFLRMMLEAGCAPNQV 785
Query: 51 VYNSLRWI 28
+L ++
Sbjct: 786 TDTTLDFL 793
>ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Solanum lycopersicum]
Length = 819
Score = 588 bits (1516), Expect = e-165
Identities = 297/353 (84%), Positives = 315/353 (89%), Gaps = 3/353 (0%)
Frame = -2
Query: 1086 SVSGATDAGTISPA---TAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQ 916
SV+GA+ GT S A A+KVGNL+VVASIAKALI+ GGTRNLEKYGD IPLSE+LVLQ
Sbjct: 19 SVAGASYTGTTSAAKTAAASKVGNLIVVASIAKALIKRGGTRNLEKYGDLIPLSESLVLQ 78
Query: 915 ILRRNNLDAARKLDFFKWCSLRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDE 736
+LRRNNLDA +KLDFFKWCSLR NFKHS ETYSQ+F+ ICYS N R+D+ +LLNSMKDDE
Sbjct: 79 VLRRNNLDAEKKLDFFKWCSLRPNFKHSTETYSQMFKCICYSRNHREDVFVLLNSMKDDE 138
Query: 735 VLLNSATFKLLLDSFTRTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVN 556
VLLNSATFKLLLDSFTRTGNFD ALEILEFVE L NSSCLSPDVYNSVLIALVQKNQVN
Sbjct: 139 VLLNSATFKLLLDSFTRTGNFDSALEILEFVEGDLANSSCLSPDVYNSVLIALVQKNQVN 198
Query: 555 LALSIFLKLLETNDGNSIGISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRW 376
LALSIFLKLLETNDGNSIG+SS + CNELL GLKR NMRAEFKQ FDKL G NVFP DRW
Sbjct: 199 LALSIFLKLLETNDGNSIGVSSAIACNELLVGLKRGNMRAEFKQVFDKLRGGNVFPFDRW 258
Query: 375 EYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWE 196
YNICIH FGCWGDL+ SLSLFKEMKERGS FSPDLCTYNSLIHVL LLGKV DA VVWE
Sbjct: 259 GYNICIHAFGCWGDLSRSLSLFKEMKERGSCFSPDLCTYNSLIHVLCLLGKVKDAFVVWE 318
Query: 195 ELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
ELKGSSGLEPDAYTYR VIQGC+KAY INDAIKVF+EMQYNGIRPDTIVYNSL
Sbjct: 319 ELKGSSGLEPDAYTYRIVIQGCSKAYLINDAIKVFTEMQYNGIRPDTIVYNSL 371
Score = 58.5 bits (140), Expect = 4e-06
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = -2
Query: 405 GKNVFPLDRWEYNICIHTFGCWG--DLANSLSLFKEMKERGSWFSPDLCTYNSLIHVLWL 232
G+ V P D YN+ I G G DLA+++ L K MK+ G D+ YN+LI+ L
Sbjct: 674 GEKVCPSDVATYNVIIQGLGKMGRADLADAV-LDKLMKQGGYL---DIVMYNTLINALGK 729
Query: 231 LGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTI 52
G++ + +++++K SG+ PD TY T+I+ AKA ++ + K M G P+ +
Sbjct: 730 AGRIEEVNKLFQQMK-DSGINPDVVTYNTLIEVHAKAGQLKQSYKFLRMMLEAGCAPNQV 788
Query: 51 VYNSLRWI 28
+L ++
Sbjct: 789 TDTTLDFL 796
>ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Populus trichocarpa]
gi|550345304|gb|EEE81962.2| hypothetical protein
POPTR_0002s18390g [Populus trichocarpa]
Length = 776
Score = 375 bits (964), Expect = e-101
Identities = 199/340 (58%), Positives = 251/340 (73%), Gaps = 8/340 (2%)
Frame = -2
Query: 1032 VGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWCSL 853
+GN+L+VA + K L E GTR+L+ DSIPLSE+LVLQILRRN+LD+++K++FFKWCS+
Sbjct: 1 MGNILLVAYLTKTLSE-SGTRSLDP--DSIPLSESLVLQILRRNSLDSSKKMEFFKWCSV 57
Query: 852 RSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNF 673
R +KHS TYSQ+F ++C S L D++ LLNSMK+D V++ S TFKLLLD+F R+G F
Sbjct: 58 RHIYKHSVSTYSQMFSTLCRSGYL-DEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKF 116
Query: 672 DCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGN---SI 502
D AL+IL+ +E N + P +Y+S+++AL +KNQV LALSI KLLE +DGN ++
Sbjct: 117 DSALDILDHMEELGSNPN---PHMYDSIIVALAKKNQVGLALSIMFKLLEASDGNEENAV 173
Query: 501 GIS--SGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLA 328
G+S V CN LL L+ M+ EFK F KL GK F L+ W YNICIH FGCWGDL
Sbjct: 174 GVSLPGSVACNALLVALRNGEMKVEFKTVFAKLRGKGGFELNTWGYNICIHAFGCWGDLT 233
Query: 327 NSLSLFKEMKER---GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAY 157
SL LFKEMKE+ PDLCTYNSLIHVL L GKV DAV+V+EELK SG EPDA+
Sbjct: 234 TSLRLFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELK-VSGHEPDAF 292
Query: 156 TYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
TYR +IQGC K+Y++ DA K+FSEMQYNG PDT+VYNSL
Sbjct: 293 TYRILIQGCCKSYQMEDATKIFSEMQYNGFLPDTVVYNSL 332
Score = 63.2 bits (152), Expect = 2e-07
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 5/200 (2%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISS-GVVCNELLAGLKRANMRAEF 430
D+ N+ L + K +++LA +F + +G+ N +++ + + F
Sbjct: 571 DMVNTFLSIFLAKGKLSLACKLFEIFTD------MGVDPVSYTYNSIMSSFVK---KGYF 621
Query: 429 KQDFDKLS--GKNVFPLDRWEYNICIHTFGCWG--DLANSLSLFKEMKERGSWFSPDLCT 262
+ +D + G+ V P D YN+ I G G DLA+S+ L K MK+ G D+
Sbjct: 622 NRAWDVFNEMGEKVCPPDIATYNLVIQGLGKMGRADLASSV-LDKLMKQGGYL---DIVM 677
Query: 261 YNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEM 82
YN+LI L G++++A ++E++K SGL PD TY +I+ +K R+ DA K M
Sbjct: 678 YNTLIDALGKAGRIDEANNLFEQMK-ISGLNPDVVTYNIMIEVHSKTGRLKDAYKFLKMM 736
Query: 81 QYNGIRPDTIVYNSLRWIAQ 22
G P+ + +L ++A+
Sbjct: 737 LDAGCLPNHVTDTTLDFLAK 756
>ref|XP_002334407.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 372 bits (954), Expect = e-100
Identities = 197/340 (57%), Positives = 251/340 (73%), Gaps = 8/340 (2%)
Frame = -2
Query: 1032 VGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWCSL 853
+GN+L+VA + K L E GTR+L+ DSIPLSE+LVLQILRRN+LD+++K++FFKWCS+
Sbjct: 1 MGNILLVAYLTKTLSE-SGTRSLDP--DSIPLSESLVLQILRRNSLDSSKKMEFFKWCSV 57
Query: 852 RSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNF 673
R +KHS TYSQ+F ++C S L +++ LLNSMK+D V++ S TFKLLLD+F R+G F
Sbjct: 58 RHIYKHSVSTYSQMFSTLCRSGYL-EEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKF 116
Query: 672 DCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGN---SI 502
D AL+IL+ +E N + P +Y+S+++AL +KNQV LALSI KLLE +DGN ++
Sbjct: 117 DSALDILDHMEELGSNPN---PHMYDSIIVALAKKNQVGLALSIMFKLLEASDGNEENAV 173
Query: 501 GIS--SGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLA 328
G+S V CN LL L+ M+ EFK F KL GK F L+ W YNICIH FGCWGDL
Sbjct: 174 GVSLPGSVACNALLVALRNGEMKVEFKTVFAKLRGKVGFELNTWGYNICIHAFGCWGDLT 233
Query: 327 NSLSLFKEMKER---GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAY 157
SL LFKEMKE+ PDLCTYNSLIHVL L GKV DAV+V+EELK SG EPDA+
Sbjct: 234 TSLRLFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELK-VSGHEPDAF 292
Query: 156 TYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
TYR +IQGC K+Y++ D+ K+FSEMQYNG PDT+VYNSL
Sbjct: 293 TYRILIQGCCKSYQMEDSTKIFSEMQYNGFLPDTVVYNSL 332
>ref|XP_006386676.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550345301|gb|ERP64473.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 776
Score = 371 bits (952), Expect = e-100
Identities = 196/340 (57%), Positives = 247/340 (72%), Gaps = 8/340 (2%)
Frame = -2
Query: 1032 VGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWCSL 853
+GN+L+VA + K L E GTR+L+ DSIPLSE LVLQILRRN+LD+++K++FFKWCS+
Sbjct: 1 MGNILLVAYLTKTLSE-SGTRSLDP--DSIPLSEYLVLQILRRNSLDSSKKMEFFKWCSV 57
Query: 852 RSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNF 673
R +KHS TYSQ+F ++C S L +++ LLNSMK+D V++ S TFKLLLD+F R+G F
Sbjct: 58 RHIYKHSVSTYSQMFSTLCRSGYL-EEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKF 116
Query: 672 DCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGNS---- 505
D AL+IL+ +E N + P +Y+S+++AL +KNQV LALSI KLLE +DGN
Sbjct: 117 DSALDILDHMEELGSNPN---PHMYDSIIVALAKKNQVGLALSIMFKLLEASDGNEENAV 173
Query: 504 -IGISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLA 328
+ + V CN LL L+ M+ EFK F KL GK F L+ W YNICIH FGCWGDL
Sbjct: 174 RVSLPGSVACNALLVALRNGEMKVEFKTVFAKLRGKVGFKLNTWGYNICIHAFGCWGDLT 233
Query: 327 NSLSLFKEMKER---GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAY 157
SL LFKEMKE+ PDLCTYNSLIHVL L GKV DAV+V+EELK SG EPDA+
Sbjct: 234 TSLRLFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELK-VSGHEPDAF 292
Query: 156 TYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
TYR +IQGC K+Y++ DA K+FSEMQYNG PDT+VYNSL
Sbjct: 293 TYRILIQGCCKSYQMEDATKIFSEMQYNGFLPDTVVYNSL 332
Score = 63.2 bits (152), Expect = 2e-07
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 5/200 (2%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISS-GVVCNELLAGLKRANMRAEF 430
D+ N+ L + K +++LA +F + +G+ N +++ + + F
Sbjct: 571 DMVNTFLSIFLAKGKLSLACKLFEIFTD------MGVDPVSYTYNSIMSSFVK---KGYF 621
Query: 429 KQDFDKLS--GKNVFPLDRWEYNICIHTFGCWG--DLANSLSLFKEMKERGSWFSPDLCT 262
+ +D + G+ V P D YN+ I G G DLA+S+ L K MK+ G D+
Sbjct: 622 NRAWDVFNEMGEKVCPPDIATYNLVIQGLGKMGRADLASSV-LDKLMKQGGYL---DIVM 677
Query: 261 YNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEM 82
YN+LI L G++++A ++E++K SGL PD TY +I+ +K R+ DA K M
Sbjct: 678 YNTLIDALGKAGRIDEANNLFEQMK-ISGLNPDVVTYNIMIEVHSKTGRLKDAYKFLKMM 736
Query: 81 QYNGIRPDTIVYNSLRWIAQ 22
G P+ + +L ++A+
Sbjct: 737 LDAGCLPNHVTDTTLDFLAK 756
>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 898
Score = 366 bits (940), Expect = 8e-99
Identities = 194/346 (56%), Positives = 253/346 (73%), Gaps = 5/346 (1%)
Frame = -2
Query: 1059 TISPATAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARK 880
++S +++ ++ ++L+VA + KAL E G RNL+ D IPLSE L+LQILR+N+LDA++K
Sbjct: 40 SLSSSSSNQLESILLVAFLNKALSE-SGVRNLDP--DFIPLSEPLILQILRQNSLDASKK 96
Query: 879 LDFFKWCSLRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLL 700
++FFKWCS N+KHSA YS +FR++C + +++ LLNSMKDD ++ + TFK LL
Sbjct: 97 IEFFKWCSFSHNYKHSACVYSHMFRTVCNAGYF-EEVRSLLNSMKDDCAIVGTGTFKFLL 155
Query: 699 DSFTRTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLET 520
D+F GNFD ALE+L+ +E N L+P +Y+SVL+AL +KNQ+ LALSIF KLLET
Sbjct: 156 DTFINLGNFDFALELLDVMEELGTN---LNPHMYDSVLVALTRKNQIGLALSIFFKLLET 212
Query: 519 NDGNSIGIS--SGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFG 346
++ IG+S V CN LL L++A+MR EFK+ FDKL G F LD W YNICIH FG
Sbjct: 213 SNDIDIGVSVPGSVACNTLLVALRKADMRVEFKKVFDKLKGMG-FELDTWGYNICIHAFG 271
Query: 345 CWGDLANSLSLFKEMKERGSWFS---PDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSG 175
CW DL +L LFKEMKE+ F PDLCTYNSLI +L GKV DA+VV+EELK SG
Sbjct: 272 CWSDLGTALRLFKEMKEKSKGFGSCCPDLCTYNSLIRLLCFSGKVKDALVVYEELK-ISG 330
Query: 174 LEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
EPDA+TYR +I+GC+K+YR+NDA K+FSEMQYNG PDT VYNSL
Sbjct: 331 HEPDAFTYRIIIEGCSKSYRMNDATKIFSEMQYNGFVPDTTVYNSL 376
Score = 72.4 bits (176), Expect = 3e-10
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 4/206 (1%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISSGVVCNELLAGLKRANMRAEFK 427
D+ N+ L + K ++++A +F ++ N + + + + + + F
Sbjct: 618 DMVNTFLSIFLAKGKLSVACKLF-EIFSDMGVNPVSYTYNSIMSSFVK-------KGYFS 669
Query: 426 QDFDKLS--GKNVFPLDRWEYNICIHTFGCWG--DLANSLSLFKEMKERGSWFSPDLCTY 259
+ +D L+ G+ V P D YN+ I G G DLA+S+ L K MK+ G D+ Y
Sbjct: 670 EAWDVLNQMGEKVCPSDIATYNLIIQGLGKMGRADLASSV-LDKLMKQGGYL---DIVMY 725
Query: 258 NSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQ 79
N+LI+ L G++++ ++E++K +SG+ PD TY T+I+ KA R+ DA K M
Sbjct: 726 NTLINALGKAGRIDEVRKLFEQMK-TSGINPDVVTYNTLIEVHTKAGRLKDAYKFLKMML 784
Query: 78 YNGIRPDTIVYNSLRWIAQGKKVDRC 1
G P+ + +L ++A+ + RC
Sbjct: 785 DAGCLPNHVTDTTLDFLAKEIEKQRC 810
>gb|EOX95524.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 807
Score = 361 bits (927), Expect = 2e-97
Identities = 200/343 (58%), Positives = 256/343 (74%), Gaps = 11/343 (3%)
Frame = -2
Query: 1032 VGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWC-S 856
+GN+L++AS+ K L E GTRNL+ +SIP+SE LV+QILR+++L+ ++KLDFF WC S
Sbjct: 23 LGNILLIASLTKTLSE-SGTRNLDP--NSIPISEPLVIQILRKHSLEPSKKLDFFNWCRS 79
Query: 855 LRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGN 676
++ NFKHSA TYS IFR++C S +++ LL +MK+D VL++S TFK LLD+F R+G
Sbjct: 80 VKPNFKHSAVTYSHIFRTLCRS-GFVEEVPNLLFAMKEDGVLVDSDTFKFLLDAFIRSGK 138
Query: 675 FDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLET----NDGN 508
FD ALEIL+F+E + L+ VY+SVL+AL++K+QV LALS+F KLLE +DGN
Sbjct: 139 FDSALEILDFMEEL---GAGLNLRVYDSVLVALIRKDQVGLALSLFFKLLEACNGNDDGN 195
Query: 507 SIGIS--SGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGD 334
S+ S + NELL L++A+MR EFKQ FD L K F D YNICIH+FGCWGD
Sbjct: 196 SVDSSLPGSIAINELLVALRKAHMRREFKQVFDILREKREFEFDTCGYNICIHSFGCWGD 255
Query: 333 LANSLSLFKEMKER----GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEP 166
L SL LFKEMKE+ GS F PDLCTYNSLI VL L+GKV DA+VVWEELK SG EP
Sbjct: 256 LGASLKLFKEMKEKEKSFGS-FGPDLCTYNSLIDVLCLVGKVKDALVVWEELK-VSGHEP 313
Query: 165 DAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
DA+TYR +IQGC+K+YR++DA K+FSEMQYNG DT+VYNSL
Sbjct: 314 DAFTYRILIQGCSKSYRMDDATKIFSEMQYNGFAMDTVVYNSL 356
Score = 60.8 bits (146), Expect = 9e-07
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISS-GVVCNELLAGLKRANMRAEF 430
D+ N+ L + K +++LA +F + +G+ N +++ + E
Sbjct: 601 DMVNTFLSIFLAKGKLSLACKLFEVFTD------MGVDPVSYTYNSIMSSFVKKGYFNEA 654
Query: 429 KQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSL 250
+++ K V P D YN+ I G G + S+ ++ ++G + D+ YN+L
Sbjct: 655 WGVLNEMDEK-VCPADIATYNLIIQGLGKMGRADIASSVLDKLMKQGGYL--DVVMYNTL 711
Query: 249 IHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNG 70
++ L G+V++A ++E+++ +SG+ PD TY T+I+ KA ++ DA K M G
Sbjct: 712 VNALGKAGRVDEASKLFEQMR-TSGINPDVITYNTLIEVHTKAGQLQDAYKFLKMMLDAG 770
Query: 69 IRP----DTIVYN 43
P DTI+ N
Sbjct: 771 CSPNHVTDTILDN 783
Score = 59.3 bits (142), Expect = 3e-06
Identities = 39/128 (30%), Positives = 65/128 (50%)
Frame = -2
Query: 420 FDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLIHV 241
F+ + V P+ + YN + +F G + + EM E+ D+ TYN +I
Sbjct: 623 FEVFTDMGVDPVS-YTYNSIMSSFVKKGYFNEAWGVLNEMDEKVC--PADIATYNLIIQG 679
Query: 240 LWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRP 61
L +G+ + A V ++L G D Y T++ KA R+++A K+F +M+ +GI P
Sbjct: 680 LGKMGRADIASSVLDKLMKQGGYL-DVVMYNTLVNALGKAGRVDEASKLFEQMRTSGINP 738
Query: 60 DTIVYNSL 37
D I YN+L
Sbjct: 739 DVITYNTL 746
>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297320808|gb|EFH51230.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 802
Score = 361 bits (926), Expect = 3e-97
Identities = 196/356 (55%), Positives = 256/356 (71%), Gaps = 16/356 (4%)
Frame = -2
Query: 1056 ISPATAA---KVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAA 886
+SPAT + ++ N+L+VAS++K L + GTR L+ +SIP+SE +VLQILRRN++D +
Sbjct: 16 LSPATNSPFPQLCNVLLVASLSKTLSQ-SGTRGLD--ANSIPISEPVVLQILRRNSIDPS 72
Query: 885 RKLDFFKWC-SLRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFK 709
+KLDFF+WC SLR+ +KHS YSQIFR++C + L ++ LL SMK+D V L+ K
Sbjct: 73 KKLDFFRWCYSLRTGYKHSVSAYSQIFRTVCRT-GLLGEVPDLLCSMKEDGVNLDQTMAK 131
Query: 708 LLLDSFTRTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKL 529
+LLDS R+G F+ AL +L+++E D CL+P +Y+SVLIAL +KN++ LALSIF KL
Sbjct: 132 ILLDSLIRSGKFESALGVLDYMEELGD---CLNPSLYDSVLIALAKKNELRLALSIFFKL 188
Query: 528 LETNDGNSIGISS--------GVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWE 373
LE +D + S V NELL GL+RA+MR+EFK F+KL G N F D W
Sbjct: 189 LEASDNHGDDTSGVTVSYLPGRVAVNELLVGLRRADMRSEFKTVFEKLKGMNRFKFDTWS 248
Query: 372 YNICIHTFGCWGDLANSLSLFKEMKER----GSWFSPDLCTYNSLIHVLWLLGKVNDAVV 205
YNICIH FGCWGDL +LSLFKEMKER GS F+PD+CTYNSLIHVL L GK DA++
Sbjct: 249 YNICIHGFGCWGDLDAALSLFKEMKERSSVSGSSFAPDICTYNSLIHVLCLFGKAKDALI 308
Query: 204 VWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
VW+ELK SG EPD TYR +IQGC K+YR++DA+++F EMQYNG PDT+VYN L
Sbjct: 309 VWDELK-VSGHEPDNSTYRILIQGCCKSYRMDDAMRIFGEMQYNGFVPDTVVYNCL 363
Score = 58.9 bits (141), Expect = 3e-06
Identities = 38/128 (29%), Positives = 63/128 (49%)
Frame = -2
Query: 420 FDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLIHV 241
F+ +G V L + YN + +F G + +M E ++ + D+ TYN +I
Sbjct: 615 FEIFNGMGVTDLTSYTYNSMMSSFVKKGYFKTVRGVLDQMGE--NFCAADIATYNVIIQG 672
Query: 240 LWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRP 61
L +G+ + A V + L G D Y T+I KA R++ A ++F M+ NGI P
Sbjct: 673 LGKMGRADLAGAVLDRLTKQGGYL-DIVMYNTLINAIGKANRLDAATQLFDHMKSNGINP 731
Query: 60 DTIVYNSL 37
D + YN++
Sbjct: 732 DVVSYNTM 739
Score = 58.5 bits (140), Expect = 4e-06
Identities = 45/201 (22%), Positives = 97/201 (48%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISSGVVCNELLAGLKRANMRAEFK 427
D+ N+ L + K ++LA KL E +G + + N +++ + +
Sbjct: 593 DMMNTFLSIYLSKGDLSLAC----KLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFKTVR 648
Query: 426 QDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLI 247
D++ G+N D YN+ I G G + ++ + ++G + D+ YN+LI
Sbjct: 649 GVLDQM-GENFCAADIATYNVIIQGLGKMGRADLAGAVLDRLTKQGGYL--DIVMYNTLI 705
Query: 246 HVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGI 67
+ + +++ A +++ +K S+G+ PD +Y T+I+ +KA ++ +A K M G
Sbjct: 706 NAIGKANRLDAATQLFDHMK-SNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGC 764
Query: 66 RPDTIVYNSLRWIAQGKKVDR 4
P+ + L ++ GK++++
Sbjct: 765 LPNHVTDTILDYL--GKEMEK 783
>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Vitis vinifera]
Length = 792
Score = 360 bits (925), Expect = 4e-97
Identities = 188/352 (53%), Positives = 254/352 (72%), Gaps = 5/352 (1%)
Frame = -2
Query: 1077 GATDAGTISPATAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNN 898
G T + + + K+G++L+VASI+K L E G TR+ + +SIP+SE+LV+QIL RN+
Sbjct: 4 GRTLSSSAAAGAGVKLGDMLLVASISKTLSERG-TRSPDL--ESIPISESLVVQILGRNS 60
Query: 897 LDAARKLDFFKWCSLRSNFKHSAETYSQIFRSICYSH-NLRDDILLLLNSMKDDEVLLNS 721
+D RK++FF+WCS R N+KHS YS IFR +C + D + LL++SMKDD V++
Sbjct: 61 IDVFRKVEFFRWCSFRHNYKHSVGAYSHIFRIVCRAGAEFLDQVPLLMSSMKDDGVVVGQ 120
Query: 720 ATFKLLLDSFTRTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSI 541
TFKLLLDS R G FD ALEIL+ +E + L+ VY+SVL+AL++KNQ+ LAL +
Sbjct: 121 ETFKLLLDSLIRAGKFDSALEILDHIEEL---GTGLNSYVYDSVLVALIRKNQLGLALPL 177
Query: 540 FLKLLETNDGNS-IGISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNI 364
F KLL ++G + + CN+LL L++A+M+ EF+ F+KL K F LD YNI
Sbjct: 178 FFKLLGGDEGQGGVPVPESNACNQLLVALRKADMKIEFRNVFEKLRAKKDFDLDTQGYNI 237
Query: 363 CIHTFGCWGDLANSLSLFKEMKER---GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEE 193
CIH FGCWGDL +L+LFKEMK++ S F PDLCTYNSLI VL L+GKV DA++VWEE
Sbjct: 238 CIHAFGCWGDLGTALNLFKEMKDKSLNSSSFGPDLCTYNSLIRVLCLVGKVKDALIVWEE 297
Query: 192 LKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
LKG SG EPDA+TYR +IQGC+K+YR++DA+++F+EMQYNG PDTIVYN+L
Sbjct: 298 LKG-SGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQYNGFCPDTIVYNTL 348
Score = 62.4 bits (150), Expect = 3e-07
Identities = 49/202 (24%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISSGVVC-NELLAGLKRANMRAEF 430
D+ N+ L + K +++LA +F +++G+ + N ++ + E
Sbjct: 586 DMVNTYLSIFLAKGKLSLACKLFEIF------SNMGVDPVIYTYNSMMTAFVKKGYFNEA 639
Query: 429 KQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSL 250
F ++ G+ V P D YN+ I G G + ++ + ++G + D+ YN+L
Sbjct: 640 WGVFHEM-GEKVCPPDIATYNVIIQGLGKMGRADLASAVLDMLMKQGGYL--DIVMYNTL 696
Query: 249 IHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNG 70
I+ L G++++A ++E+++ SSG+ PD T+ T+I+ AKA ++ A K M G
Sbjct: 697 INALGKAGRIDEATKLFEQMR-SSGINPDVVTFNTLIEIHAKAGQLKAAYKFLKLMLDAG 755
Query: 69 IRPDTIVYNSLRWIAQGKKVDR 4
P+ + +L ++ GK++++
Sbjct: 756 CSPNHVTDTTLDFL--GKEIEK 775
>ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutrema salsugineum]
gi|557097371|gb|ESQ37807.1| hypothetical protein
EUTSA_v10028437mg [Eutrema salsugineum]
Length = 801
Score = 359 bits (922), Expect = 9e-97
Identities = 196/342 (57%), Positives = 247/342 (72%), Gaps = 12/342 (3%)
Frame = -2
Query: 1026 NLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWC-SLR 850
N+LVVAS++K L GTRNL+ +S P+SE +VLQILRRN+LD ++KLDFF+WC SLR
Sbjct: 29 NVLVVASLSKTLSH-SGTRNLD--ANSTPISEPIVLQILRRNSLDPSKKLDFFRWCFSLR 85
Query: 849 SNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNFD 670
+KHSA YSQIFR++C + L +I LL SMK+D V L+ T KLLLDS R+G +D
Sbjct: 86 PGYKHSASAYSQIFRTVCRT-GLLGEIPNLLGSMKEDGVNLDQTTSKLLLDSLIRSGKYD 144
Query: 669 CALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETND------GN 508
AL +L+++E CL+P +Y+SVLIALV+KN++ LALSIF KLLE +D G
Sbjct: 145 SALGVLDYMEEL---GGCLNPRLYDSVLIALVKKNELRLALSIFFKLLEASDNPSETGGV 201
Query: 507 SIGISSGVVC-NELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDL 331
S+ G V NELL GL++ANM+ EFK FDKL G F D W YNICIH FGCWGDL
Sbjct: 202 SVSYLPGTVAVNELLVGLRKANMKLEFKGVFDKLKGMERFKFDTWGYNICIHGFGCWGDL 261
Query: 330 ANSLSLFKEMKER----GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPD 163
+LSLFKEMKE+ GS PD+CTYNSLIHVL L+GK DA++VW+ELK SG EPD
Sbjct: 262 DAALSLFKEMKEQSSISGSCAGPDICTYNSLIHVLCLVGKAKDALIVWDELK-VSGHEPD 320
Query: 162 AYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
TYR +IQGC K+Y ++DA+++F EMQYNG PDT++YNSL
Sbjct: 321 NSTYRILIQGCCKSYLMDDAMRIFGEMQYNGFVPDTVLYNSL 362
Score = 59.7 bits (143), Expect = 2e-06
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGIS--SGVVCNELLAGLKRANMRAE 433
D+ N+ L + K ++LA +F N +G++ + N +++ +
Sbjct: 592 DMMNTFLSIYLSKGDLSLACKLFEIF------NEMGVTDLTSYTYNSMMSSFVKKGYFKT 645
Query: 432 FKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNS 253
+ D++ G+N D YN+ I G G + ++ + E+G + D+ YN+
Sbjct: 646 ARGVLDQM-GENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTEQGGYL--DIVMYNT 702
Query: 252 LIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYN 73
LI+ L ++++A ++E +K SSG+ PD +Y T+I+ +KA ++ +A K M
Sbjct: 703 LINALGKANRLDEATRLFEHMK-SSGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA 761
Query: 72 GIRPDTIVYNSLRWIAQGKKVDR 4
P+ + L ++ GK++++
Sbjct: 762 NCLPNHVTDTILDYL--GKEMEK 782
>ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Capsella rubella]
gi|482558640|gb|EOA22832.1| hypothetical protein
CARUB_v10003556mg [Capsella rubella]
Length = 802
Score = 357 bits (915), Expect = 6e-96
Identities = 192/343 (55%), Positives = 250/343 (72%), Gaps = 13/343 (3%)
Frame = -2
Query: 1026 NLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWC-SLR 850
N+L+VAS++K L + GTR+L+ +SIP+SE++VLQILRR+++D+++KLDFF+WC SLR
Sbjct: 29 NVLLVASLSKTLSQ-SGTRSLD--ANSIPISESVVLQILRRSSIDSSKKLDFFRWCFSLR 85
Query: 849 SNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNFD 670
+KHSA YSQIFR++C + L ++ LL SMKDD V L+ K+LLDS R+G FD
Sbjct: 86 PGYKHSASAYSQIFRTVCRT-GLIGEVPDLLGSMKDDGVNLDQTMAKVLLDSLIRSGKFD 144
Query: 669 CALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISS 490
AL +L+++E D CL+P +Y+SVL+ALV+KN++ LALSIF KLLE +D +S G
Sbjct: 145 SALGVLDYMEELGD---CLNPGLYDSVLVALVKKNEMRLALSIFFKLLEASDNHSDGTGG 201
Query: 489 GVVC--------NELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGD 334
+V NELL GL+RA MR+EFK+ F+KL F D W YNICIH FGCWGD
Sbjct: 202 VIVSYLPGTVAVNELLVGLRRAGMRSEFKRVFEKLREVKRFKFDTWGYNICIHGFGCWGD 261
Query: 333 LANSLSLFKEMKER----GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEP 166
L +LSLFKEMK + GS F PD+CTYNSLIHVL L GK DA++VW+ELK SG EP
Sbjct: 262 LDAALSLFKEMKVQSSVSGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELK-VSGHEP 320
Query: 165 DAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
D TYR +IQGC K+YR++DA+++F EMQYNG PDTIVYN L
Sbjct: 321 DNSTYRILIQGCCKSYRMDDAMRIFGEMQYNGFVPDTIVYNCL 363
Score = 65.1 bits (157), Expect = 5e-08
Identities = 39/128 (30%), Positives = 65/128 (50%)
Frame = -2
Query: 420 FDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLIHV 241
F+ G V L + YN + +F G + + +M E ++ + D+ TYN +IH
Sbjct: 615 FEIFEGMGVTDLTSYTYNSMMSSFVKKGYFETARGVLDQMGE--NFCASDIATYNVIIHG 672
Query: 240 LWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRP 61
L +G+ + A V + L G D Y T+I KA R+++A ++F M+ NGI P
Sbjct: 673 LGKMGRADLASAVLDRLTKQGGYL-DIVMYNTLINSLGKANRLDEATRLFEHMKSNGINP 731
Query: 60 DTIVYNSL 37
D + YN++
Sbjct: 732 DVVSYNTM 739
Score = 64.7 bits (156), Expect = 6e-08
Identities = 48/201 (23%), Positives = 99/201 (49%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISSGVVCNELLAGLKRANMRAEFK 427
D+ N+ L + K ++LA KL E +G + + N +++ + +
Sbjct: 593 DMMNTFLSIYLSKGDLSLAC----KLFEIFEGMGVTDLTSYTYNSMMSSFVKKGYFETAR 648
Query: 426 QDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLI 247
D++ G+N D YN+ IH G G + ++ + ++G + D+ YN+LI
Sbjct: 649 GVLDQM-GENFCASDIATYNVIIHGLGKMGRADLASAVLDRLTKQGGYL--DIVMYNTLI 705
Query: 246 HVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGI 67
+ L ++++A ++E +K S+G+ PD +Y T+I+ +KA ++ +A K M G
Sbjct: 706 NSLGKANRLDEATRLFEHMK-SNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKMMLDAGC 764
Query: 66 RPDTIVYNSLRWIAQGKKVDR 4
P+ + L ++ GK++++
Sbjct: 765 LPNHVTDTILDYL--GKEIEK 783
>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
Length = 508
Score = 356 bits (914), Expect = 8e-96
Identities = 192/345 (55%), Positives = 250/345 (72%), Gaps = 15/345 (4%)
Frame = -2
Query: 1026 NLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWC-SLR 850
N+L+VAS++K L + GTR+L+ +SIP+SE +VLQILRRN++D ++KLDFF+WC SLR
Sbjct: 29 NVLLVASLSKTLSQ-SGTRSLD--ANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLR 85
Query: 849 SNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNFD 670
+KHSA YSQIFR++C + L ++ LL SMK+D V L+ K+LLDS R+G F+
Sbjct: 86 PGYKHSATAYSQIFRTVCRT-GLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFE 144
Query: 669 CALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISS 490
AL +L+++E D CL+P VY+SVLIALV+K+++ LALSI KLLE +D +S +
Sbjct: 145 SALGVLDYMEELGD---CLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 489 GVVC----------NELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCW 340
V+ NELL GL+RA+MR+EFK+ F+KL G F D W YNICIH FGCW
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 339 GDLANSLSLFKEMKER----GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGL 172
GDL +LSLFKEMKER GS F PD+CTYNSLIHVL L GK DA++VW+ELK SG
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELK-VSGH 320
Query: 171 EPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
EPD TYR +IQGC K+YR++DA++++ EMQYNG PDTIVYN L
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
[Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
At4g01570/T15B16_21 [Arabidopsis thaliana]
gi|332656643|gb|AEE82043.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 805
Score = 356 bits (914), Expect = 8e-96
Identities = 192/345 (55%), Positives = 250/345 (72%), Gaps = 15/345 (4%)
Frame = -2
Query: 1026 NLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWC-SLR 850
N+L+VAS++K L + GTR+L+ +SIP+SE +VLQILRRN++D ++KLDFF+WC SLR
Sbjct: 29 NVLLVASLSKTLSQ-SGTRSLD--ANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLR 85
Query: 849 SNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNFD 670
+KHSA YSQIFR++C + L ++ LL SMK+D V L+ K+LLDS R+G F+
Sbjct: 86 PGYKHSATAYSQIFRTVCRT-GLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFE 144
Query: 669 CALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISS 490
AL +L+++E D CL+P VY+SVLIALV+K+++ LALSI KLLE +D +S +
Sbjct: 145 SALGVLDYMEELGD---CLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 489 GVVC----------NELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCW 340
V+ NELL GL+RA+MR+EFK+ F+KL G F D W YNICIH FGCW
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 339 GDLANSLSLFKEMKER----GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGL 172
GDL +LSLFKEMKER GS F PD+CTYNSLIHVL L GK DA++VW+ELK SG
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELK-VSGH 320
Query: 171 EPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
EPD TYR +IQGC K+YR++DA++++ EMQYNG PDTIVYN L
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Score = 61.6 bits (148), Expect = 5e-07
Identities = 38/128 (29%), Positives = 65/128 (50%)
Frame = -2
Query: 420 FDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLIHV 241
F+ +G V L + YN + +F G + + +M E ++ + D+ TYN +I
Sbjct: 617 FEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFE--NFCAADIATYNVIIQG 674
Query: 240 LWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRP 61
L +G+ + A V + L G D Y T+I KA R+++A ++F M+ NGI P
Sbjct: 675 LGKMGRADLASAVLDRLTKQGGYL-DIVMYNTLINALGKATRLDEATQLFDHMKSNGINP 733
Query: 60 DTIVYNSL 37
D + YN++
Sbjct: 734 DVVSYNTM 741
Score = 57.4 bits (137), Expect = 1e-05
Identities = 45/201 (22%), Positives = 97/201 (48%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISSGVVCNELLAGLKRANMRAEFK 427
D+ N+ L + K ++LA KL E +G + + N +++ + +
Sbjct: 595 DMMNTFLSIYLSKGDLSLAC----KLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTAR 650
Query: 426 QDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLI 247
D++ +N D YN+ I G G + ++ + ++G + D+ YN+LI
Sbjct: 651 GVLDQMF-ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYL--DIVMYNTLI 707
Query: 246 HVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGI 67
+ L ++++A +++ +K S+G+ PD +Y T+I+ +KA ++ +A K M G
Sbjct: 708 NALGKATRLDEATQLFDHMK-SNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGC 766
Query: 66 RPDTIVYNSLRWIAQGKKVDR 4
P+ + L ++ GK++++
Sbjct: 767 LPNHVTDTILDYL--GKEMEK 785
>gb|EPS65453.1| hypothetical protein M569_09325, partial [Genlisea aurea]
Length = 770
Score = 350 bits (898), Expect = 6e-94
Identities = 174/331 (52%), Positives = 241/331 (72%), Gaps = 1/331 (0%)
Frame = -2
Query: 1026 NLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWCSLRS 847
N+LVVASI K L + G + LEK DSIPLSE++VLQI+ +L ++KL+FF+WCS R
Sbjct: 1 NILVVASITKILSKFGALQYLEKNADSIPLSEDVVLQIVHHRSLVISKKLEFFRWCSSRP 60
Query: 846 NFKHSAETYSQIFRSIC-YSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNFD 670
++ H+A YS++ R+I + + ++++ LL MK D V+L+S T K +L+ R FD
Sbjct: 61 DYNHTANAYSEMLRAIFRFPNQHHNNVIELLALMKRDGVILDSDTLKRILNGLIRAQKFD 120
Query: 669 CALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISS 490
AL++L+++E+ + LSPDVY+ VL+ALV+K+Q+++AL +F KLL + + I
Sbjct: 121 YALDVLDYIEKDSVIAGNLSPDVYSPVLVALVRKDQISIALPVFFKLLHSQFEDYI--PD 178
Query: 489 GVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLF 310
CNELLAGLK+ M+ EF++ F KL +P DRW YNICIH+FGCWGDL+ +LSLF
Sbjct: 179 AFACNELLAGLKKKKMKNEFREVFAKLRETARYPSDRWGYNICIHSFGCWGDLSTALSLF 238
Query: 309 KEMKERGSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGC 130
KEMK+RG PDLCTYNSLI V LG++NDA+V+W+ELK SSG EPD +TYR +IQGC
Sbjct: 239 KEMKDRGGSVYPDLCTYNSLIQVFCSLGRLNDALVIWKELKNSSGYEPDRFTYRILIQGC 298
Query: 129 AKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
+K+YRINDA+ +F+EMQYNGIR +T+ YNSL
Sbjct: 299 SKSYRINDAMTIFNEMQYNGIRAETVTYNSL 329
>ref|XP_006491416.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Citrus sinensis]
Length = 790
Score = 345 bits (886), Expect = 1e-92
Identities = 187/365 (51%), Positives = 265/365 (72%), Gaps = 12/365 (3%)
Frame = -2
Query: 1059 TISP---ATAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDA 889
T+SP + + ++G++L++A + K L E GTRNL+ SIP+SE LVLQ+L +N+LD+
Sbjct: 7 TLSPPVNSASLQLGSILLLAFVTKTLKE-SGTRNLDPR--SIPISEPLVLQVLGKNSLDS 63
Query: 888 ARKLDFFKWCS-LRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATF 712
++KLDFF+WCS LR +KH+A TYS IFR++C + L +++ LLNSM++D+V+++S TF
Sbjct: 64 SKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFL-EEVPSLLNSMQEDDVVVDSETF 122
Query: 711 KLLLDSFTRTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLK 532
KLLL+ ++G D A+EIL+++E + LSP+VY+SVL++LV+K Q+ LA+SI K
Sbjct: 123 KLLLEPCIKSGKIDFAIEILDYMEEL---GTSLSPNVYDSVLVSLVRKKQLGLAMSILFK 179
Query: 531 LLETNDGNSI------GISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEY 370
LLE + N+ + V CNELL L++++ R+EFKQ F++L + F D + Y
Sbjct: 180 LLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGY 239
Query: 369 NICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEEL 190
NICIH FGCWGDL SL LFKEMKE+G PDL TYNSLI VL ++GKV DA++VWEEL
Sbjct: 240 NICIHAFGCWGDLHTSLRLFKEMKEKG--LVPDLHTYNSLIQVLCVVGKVKDALIVWEEL 297
Query: 189 KGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL--RWIAQGK 16
KG SG EP+ +T+R +IQGC K+YR++DA+K+FSEMQYNG+ PDT+VYNSL R K
Sbjct: 298 KG-SGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNRMFKSRK 356
Query: 15 KVDRC 1
++ C
Sbjct: 357 VMEAC 361
Score = 67.8 bits (164), Expect = 7e-09
Identities = 57/206 (27%), Positives = 108/206 (52%), Gaps = 5/206 (2%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISS-GVVCNELLAGLKRANMRAEF 430
D+ N+ L + K ++NLA +F + +G+ N +++ + + F
Sbjct: 592 DMVNTFLSIFLAKGKLNLACKLFEIFTD------MGVHPVNYTYNSMMSSFVK---KGYF 642
Query: 429 KQDFDKLS--GKNVFPLDRWEYNICIHTFGCWG--DLANSLSLFKEMKERGSWFSPDLCT 262
Q + L+ G+ P D YN+ I G G DLA+++ L K MK+ G + D+
Sbjct: 643 NQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTI-LDKLMKQGGGYL--DVVM 699
Query: 261 YNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEM 82
YN+LI+VL G+ ++A +++E+++ +SG+ PD T+ T+I+ KA R+ +A M
Sbjct: 700 YNTLINVLGKAGRFDEANMLFEQMR-TSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMM 758
Query: 81 QYNGIRPDTIVYNSLRWIAQGKKVDR 4
+G P+ + +L ++ G+++DR
Sbjct: 759 LDSGCTPNHVTDTTLDFL--GREIDR 782
>ref|XP_006444679.1| hypothetical protein CICLE_v10023806mg [Citrus clementina]
gi|557546941|gb|ESR57919.1| hypothetical protein
CICLE_v10023806mg [Citrus clementina]
Length = 619
Score = 345 bits (886), Expect = 1e-92
Identities = 184/351 (52%), Positives = 261/351 (74%), Gaps = 10/351 (2%)
Frame = -2
Query: 1059 TISP---ATAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDA 889
T+SP + + ++G++L++A + K L E GTRNL+ SIP+SE LVLQ+L +N+LD+
Sbjct: 7 TLSPPVNSASLQLGSILLLAFVTKTLKE-SGTRNLDPR--SIPISEPLVLQVLGKNSLDS 63
Query: 888 ARKLDFFKWCS-LRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATF 712
++KLDFF+WCS LR +KH+A TYS IFR++C + L +++ LLNSM++D+V+++S TF
Sbjct: 64 SKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFL-EEVPSLLNSMQEDDVVVDSETF 122
Query: 711 KLLLDSFTRTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLK 532
KLLL++ ++G D A+EIL+++E + LSP+VY+SVL++LV+K Q+ LA+SI K
Sbjct: 123 KLLLEACIKSGKIDFAIEILDYMEEL---GTSLSPNVYDSVLVSLVRKKQLGLAMSILFK 179
Query: 531 LLETNDGNSI------GISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEY 370
LLE + N+ + V CNELL L++++ R+EFKQ F++L + F D + Y
Sbjct: 180 LLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGY 239
Query: 369 NICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEEL 190
NICIH FGCWGDL SL LFKEMKE+G PDL TYNSLI VL ++GKV DA++VWEEL
Sbjct: 240 NICIHAFGCWGDLHTSLRLFKEMKEKG--LVPDLHTYNSLIQVLCVVGKVKDALIVWEEL 297
Query: 189 KGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
KG SG EP+ +T+R +IQGC K+YR++DA+K+FSEMQYNG+ PDT+VYNSL
Sbjct: 298 KG-SGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSL 347
Score = 70.5 bits (171), Expect = 1e-09
Identities = 62/269 (23%), Positives = 125/269 (46%), Gaps = 6/269 (2%)
Frame = -2
Query: 825 TYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNFDCALEILEF 646
T+ I + C S+ + DD + + + M+ + ++ ++ + LL+ ++ +E +
Sbjct: 308 THRIIIQGCCKSYRM-DDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRK---VMEACQL 363
Query: 645 VERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETN---DGNSIGISSGVVCN 475
E+ + + S +N ++ L + + A ++F L + DG + I +C
Sbjct: 364 FEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCR 423
Query: 474 E--LLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEM 301
E + L + + K F+ + V P++ + YN + +F G + + EM
Sbjct: 424 EGQIEEALPKGKLNLACKL-FEIFTDMGVHPVN-YTYNSMMSSFVKKGYFNQAWGVLNEM 481
Query: 300 KERGSWFSP-DLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAK 124
E+ F P D+ TYN +I L +G+ + A + ++L G D Y T+I K
Sbjct: 482 GEK---FCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGK 538
Query: 123 AYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
A R ++A +F +M+ +GI PD + +N+L
Sbjct: 539 AGRFDEANMLFEQMRTSGINPDVVTFNTL 567
Score = 70.1 bits (170), Expect = 1e-09
Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 13/266 (4%)
Frame = -2
Query: 762 LLNSMKDDEVLLNSATFKLLLDSFTRTGNFDCALEI---LEFVERYLDNSSCLSPDVYNS 592
L M D V + T +L+D R G + A + L+ +++D + ++
Sbjct: 363 LFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT------FSI 416
Query: 591 VLIALVQKNQVNLAL-----SIFLKLLETNDGNSIGISS-GVVCNELLAGLKRANMRAEF 430
V++ L ++ Q+ AL ++ KL E +G+ N +++ + + F
Sbjct: 417 VVLQLCREGQIEEALPKGKLNLACKLFEIF--TDMGVHPVNYTYNSMMSSFVK---KGYF 471
Query: 429 KQDFDKLS--GKNVFPLDRWEYNICIHTFGCWG--DLANSLSLFKEMKERGSWFSPDLCT 262
Q + L+ G+ P D YN+ I G G DLA+++ L K MK+ G + D+
Sbjct: 472 NQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTI-LDKLMKQGGGYL--DVVM 528
Query: 261 YNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEM 82
YN+LI+VL G+ ++A +++E+++ +SG+ PD T+ T+I+ KA R+ +A M
Sbjct: 529 YNTLINVLGKAGRFDEANMLFEQMR-TSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMM 587
Query: 81 QYNGIRPDTIVYNSLRWIAQGKKVDR 4
+G P+ + +L ++ G+++DR
Sbjct: 588 LDSGCTPNHVTDTTLDFL--GREIDR 611
>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Cucumis sativus] gi|449523383|ref|XP_004168703.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 343 bits (881), Expect = 5e-92
Identities = 188/349 (53%), Positives = 246/349 (70%), Gaps = 12/349 (3%)
Frame = -2
Query: 1047 ATAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFF 868
+T + + +LL++ASI K L E GTR L+ + S+P+S L+LQIL +L+ + KLDFF
Sbjct: 21 STLSHLSHLLLLASITKTLSE-SGTRTLQHH--SLPISHPLLLQILHSRSLNPSHKLDFF 77
Query: 867 KWCSLRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFT 688
KWCSL NF HS TYSQIF +C S L + + LL+SMK D V ++S TFK+LLD+F
Sbjct: 78 KWCSLAPNFNHSPSTYSQIFHILCRSGYLHE-VPPLLDSMKRDGVSVDSHTFKVLLDAFI 136
Query: 687 RTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLET-NDG 511
R+G +D ALEIL+ +E D + L + YNSVL+AL++KNQV LALSIF KLL+ N+G
Sbjct: 137 RSGKYDAALEILDHME---DLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNG 193
Query: 510 NSIG--------ISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIH 355
+ + + + CNELL L++ +MR EFK+ FDKL F + YNICI+
Sbjct: 194 GQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIY 253
Query: 354 TFGCWGDLANSLSLFKEMKER---GSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKG 184
FGCWG L +LSLFKEMKE+ FSPDLCTYNS+IHVL L+GKV DA++VWEELKG
Sbjct: 254 AFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKG 313
Query: 183 SSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
SG EPDA+TYR +IQGC K+ R++DA +F+EM+YNG+ PDTIVYNSL
Sbjct: 314 -SGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSL 361
Score = 68.6 bits (166), Expect = 4e-09
Identities = 52/208 (25%), Positives = 107/208 (51%)
Frame = -2
Query: 645 VERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISSGVVCNELL 466
++ DNS ++ + N+ L + K ++NLA +F ++ N + + N +L
Sbjct: 588 IQEKQDNSFDIN--MVNTFLSIFLAKGKLNLACKLF-EIFSDMGVNPVKYTY----NSML 640
Query: 465 AGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGS 286
+ + + F+++ G+NV P D YN+ I G G + S+ +++ E+G
Sbjct: 641 SSFVKKGYFHQAWGIFNEM-GENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGG 699
Query: 285 WFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRIND 106
+ D+ YN+LI+ L G+++D ++ +++ +SG+ PD T+ T+I+ +KA R+ D
Sbjct: 700 YL--DIVMYNTLINALGKAGRMDDVNKLFGQMR-NSGINPDVVTFNTLIEVHSKAGRLKD 756
Query: 105 AIKVFSEMQYNGIRPDTIVYNSLRWIAQ 22
A K M +G P+ + +L ++ +
Sbjct: 757 AYKFLKMMLDSGCSPNHVTDTTLDFLGR 784
Score = 61.6 bits (148), Expect = 5e-07
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 4/260 (1%)
Frame = -2
Query: 804 SICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTGNFDCALEILEFVERYLDN 625
SI Y N R D L + +D +++S S N D + E E ER +D+
Sbjct: 505 SIKYQKNKRKDFSSLFSPKEDLSEVISSRA------SSAAKVNIDNSFENTE--ERDMDS 556
Query: 624 SSCLSPDVYNSVLIALVQKNQVNLALSIFL----KLLETNDGNSIGISSGVVCNELLAGL 457
S SP V +A N + L F + ++ NS I+ +
Sbjct: 557 WSS-SPYVNRLANLA----NSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAK 611
Query: 456 KRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFS 277
+ N+ + F+ S V P+ ++ YN + +F G + +F EM E
Sbjct: 612 GKLNLACKL---FEIFSDMGVNPV-KYTYNSMLSSFVKKGYFHQAWGIFNEMGENVC--P 665
Query: 276 PDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIK 97
D+ TYN +I L +G+ + A V E+L G D Y T+I KA R++D K
Sbjct: 666 ADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYL-DIVMYNTLINALGKAGRMDDVNK 724
Query: 96 VFSEMQYNGIRPDTIVYNSL 37
+F +M+ +GI PD + +N+L
Sbjct: 725 LFGQMRNSGINPDVVTFNTL 744
>ref|XP_004308750.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Fragaria vesca subsp. vesca]
Length = 789
Score = 337 bits (864), Expect = 5e-90
Identities = 183/339 (53%), Positives = 238/339 (70%), Gaps = 1/339 (0%)
Frame = -2
Query: 1050 PATAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDF 871
P TAA++G++L+VASI K L + GTRNL + +PL+E L+LQILR +L ++KLDF
Sbjct: 13 PHTAAELGDILLVASITKTLSQ-SGTRNLPQ---PLPLTEPLLLQILRTQSLHPSKKLDF 68
Query: 870 FKWCSLRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSF 691
FKWCSL + S +S + + C + L + I LL M+ D + ++S TFK LLD+F
Sbjct: 69 FKWCSLTHSIPPSPRAFSHVLHTACRAGFLAE-IPELLTIMRRDSLAVDSGTFKSLLDAF 127
Query: 690 TRTGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDG 511
R G FD A+EIL+ ++ ++ L+ D+YNSVL+ALV+K Q+ LA+SI ++LLE G
Sbjct: 128 IREGKFDMAIEILDTMQEV---NAELNADMYNSVLVALVRKGQLRLAMSILVRLLE--GG 182
Query: 510 NSIGISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDL 331
+ + S + CNELL GL++ +MR EFKQ +DKL G F +D W YNICIH FGCWGDL
Sbjct: 183 SCDQVPSCIACNELLVGLRKGDMRVEFKQVYDKLRGNEWFEMDTWGYNICIHAFGCWGDL 242
Query: 330 ANSLSLFKEMKERGS-WFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYT 154
SLSLFKEMK+ S PDL TYNSLIHVL L+GKV+DA+ VWEELK SG EPDA T
Sbjct: 243 GTSLSLFKEMKDLNSDSVFPDLSTYNSLIHVLCLVGKVDDAITVWEELK-CSGHEPDAIT 301
Query: 153 YRTVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
YR +IQGC K YRI +A ++FSEMQ NG PDT+VYNSL
Sbjct: 302 YRILIQGCCKCYRIEEATRIFSEMQNNGYNPDTVVYNSL 340
Score = 67.4 bits (163), Expect = 1e-08
Identities = 57/205 (27%), Positives = 108/205 (52%), Gaps = 4/205 (1%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISSGVVCNELLAGLKRANMRAEFK 427
D+ N+ L + K ++++A +F ++ N + + N +L+ + + F
Sbjct: 585 DMVNTFLSLFLAKGKLSMACKLF-EIFSDTGANPVSYTY----NSILSSFVK---KGYFN 636
Query: 426 QDFDKLS--GKNVFPLDRWEYNICIHTFGCWG--DLANSLSLFKEMKERGSWFSPDLCTY 259
+ + LS G+ V P D YN+ I G G DLA+S+ L K MK+ G D+ Y
Sbjct: 637 EAWGVLSEMGEKVCPTDIATYNMIIQGLGKMGRADLASSV-LDKLMKQGGYL---DVVMY 692
Query: 258 NSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQ 79
N+LI+ L ++++ +++++K SSG+ PD T+ T+I+ +KA R+ DA K M
Sbjct: 693 NTLINALGKANRIDEVNKLFKQMK-SSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMML 751
Query: 78 YNGIRPDTIVYNSLRWIAQGKKVDR 4
+G P+ + +L ++ GK++++
Sbjct: 752 DSGCIPNHVTDTTLDFL--GKEIEK 774
>gb|EMJ21345.1| hypothetical protein PRUPE_ppa019625mg [Prunus persica]
Length = 558
Score = 319 bits (817), Expect = 1e-84
Identities = 184/337 (54%), Positives = 228/337 (67%), Gaps = 1/337 (0%)
Frame = -2
Query: 1044 TAAKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFK 865
+A+++G++L+VASI K L GTRNL ++ LSE L+LQILR +L ++K+DFFK
Sbjct: 14 SASQLGDILLVASITKTL-SSSGTRNLPD-PHTLSLSEPLLLQILRAQSLHPSKKVDFFK 71
Query: 864 WCSLRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTR 685
WCSL N KHSA TYS I R+ + L + + LL+SMK+D V+++S TFK LLD+F R
Sbjct: 72 WCSLTHNIKHSARTYSHILRTASRAGFLHE-VPHLLHSMKEDGVVIDSQTFKALLDAFIR 130
Query: 684 TGNFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGNS 505
+G FD ALEIL+ +E + L+ D+YNSVL+ALV+KNQV LA+SI LKLLE
Sbjct: 131 SGKFDYALEILDIMEEV---GASLNTDMYNSVLVALVRKNQVGLAMSILLKLLEG----- 182
Query: 504 IGISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLAN 325
G SS +Q FDKL F +D W YNICIH FGCWGDL
Sbjct: 183 -GCSS--------------------QQVFDKLRENKGFEMDNWGYNICIHAFGCWGDLGT 221
Query: 324 SLSLFKEMKERG-SWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYR 148
SLSLFKEMK+ PDL TYNSLIHVL L+GKVNDA+ VWEELKGS G EPDA TYR
Sbjct: 222 SLSLFKEMKDSNLESVGPDLPTYNSLIHVLCLVGKVNDALTVWEELKGS-GHEPDAITYR 280
Query: 147 TVIQGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
+IQGC K+YRI++A +FS+MQ NG PDTIVYNSL
Sbjct: 281 ILIQGCCKSYRIDEATNIFSQMQLNGYIPDTIVYNSL 317
Score = 68.6 bits (166), Expect = 4e-09
Identities = 77/317 (24%), Positives = 136/317 (42%), Gaps = 6/317 (1%)
Frame = -2
Query: 969 NLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWCSLR-SNFKHSAETYSQIFRSICY 793
NLE G +P +L+ + ++ A + W L+ S + A TY + + C
Sbjct: 233 NLESVGPDLPTYNSLIHVLCLVGKVNDALTV----WEELKGSGHEPDAITYRILIQGCCK 288
Query: 792 SHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSF--TRTGNFDCALEILEFVERYLDNSS 619
S+ + D+ + + M+ + + ++ + LLD R N C L E+ + N
Sbjct: 289 SYRI-DEATNIFSQMQLNGYIPDTIVYNSLLDGLFKARKVNDGCHL-----FEKMIQNGV 342
Query: 618 CLSPDVYNSVLIALVQKNQVNLALSIFLKLLETN---DGNSIGISSGVVCNELLAGLKRA 448
S YN ++ L + + A ++F L + DG + I C E L
Sbjct: 343 RASTWTYNILVDGLFKNGRAEAAYTLFCDLKKKGQFVDGVTYSIVVLQHCKEGLLEKALG 402
Query: 447 NMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDL 268
++ G+N P+ + YN + +F G + + EM E+ D+
Sbjct: 403 DL------------GEN--PVS-YTYNSMMSSFVKKGYFNEAWGVLNEMGEKVC--PTDI 445
Query: 267 CTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFS 88
TYN +I L +G+ + A V ++L G D Y T+I KA RI++ K+F
Sbjct: 446 ATYNVIIQGLGKMGRADLASCVLDKLMKQGGYL-DVVMYNTLINALGKASRIDEVNKLFG 504
Query: 87 EMQYNGIRPDTIVYNSL 37
+M+ +GI PD + +N+L
Sbjct: 505 QMKSSGINPDVVTFNTL 521
>gb|EXC13626.1| hypothetical protein L484_019583 [Morus notabilis]
Length = 788
Score = 317 bits (813), Expect = 4e-84
Identities = 177/334 (52%), Positives = 236/334 (70%)
Frame = -2
Query: 1038 AKVGNLLVVASIAKALIEPGGTRNLEKYGDSIPLSENLVLQILRRNNLDAARKLDFFKWC 859
+++ ++L+VAS+ K L E TR L SIPLSE ++LQILR N+L ++KLDFF W
Sbjct: 18 SQLADVLLVASLTKTLSE-SSTRYLPD-PRSIPLSEPILLQILRNNSLHISKKLDFFTWF 75
Query: 858 SLRSNFKHSAETYSQIFRSICYSHNLRDDILLLLNSMKDDEVLLNSATFKLLLDSFTRTG 679
SL S+ K SA +YSQ+ R++C +L + LL SM+ + V+++S TFK LLD+F R+G
Sbjct: 76 SLNSDLKPSAHSYSQVLRALCREGHLHE-ASNLLGSMRQNGVIIDSWTFKTLLDTFIRSG 134
Query: 678 NFDCALEILEFVERYLDNSSCLSPDVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIG 499
FD ALEIL+ +E L+ +Y+SVLIALV+K+Q++ ALSIF K+LE +S
Sbjct: 135 KFDFALEILDTMEEL---GVTLNSHMYDSVLIALVRKDQLSFALSIFFKILE----DSSH 187
Query: 498 ISSGVVCNELLAGLKRANMRAEFKQDFDKLSGKNVFPLDRWEYNICIHTFGCWGDLANSL 319
+ S + CNELL LK+++MR EFKQ FD + K F ++ W YNICIH FG WGDL SL
Sbjct: 188 VPSSIGCNELLVALKKSDMRVEFKQVFDGIREKKGFGMNVWGYNICIHAFGFWGDLGTSL 247
Query: 318 SLFKEMKERGSWFSPDLCTYNSLIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVI 139
SL++EMK PDLCTYNSLIHVL GKV DA+VV+EELKG SG +PD +TYR +I
Sbjct: 248 SLYREMKVS---VGPDLCTYNSLIHVLCFFGKVKDALVVYEELKG-SGHQPDRFTYRILI 303
Query: 138 QGCAKAYRINDAIKVFSEMQYNGIRPDTIVYNSL 37
QGC K+YRI++A K+F+EM+YNG DT+VYNSL
Sbjct: 304 QGCCKSYRIDNAEKIFNEMEYNGHCADTVVYNSL 337
Score = 63.2 bits (152), Expect = 2e-07
Identities = 49/203 (24%), Positives = 103/203 (50%), Gaps = 2/203 (0%)
Frame = -2
Query: 606 DVYNSVLIALVQKNQVNLALSIFLKLLETNDGNSIGISSGVVCNELLAGLKRANMRAEFK 427
D+ N+ L + K +++LA +F ++ N + + N ++ + + F
Sbjct: 583 DMVNTFLSIFLAKGKLSLACKLF-EIFTDMGVNPVSYTY----NSMMTSFVK---KGYFD 634
Query: 426 QDFDKLS--GKNVFPLDRWEYNICIHTFGCWGDLANSLSLFKEMKERGSWFSPDLCTYNS 253
+ ++ L G+ V P D YN+ I + G G + ++ ++ E+G + DL YN+
Sbjct: 635 EAWNILGEMGEKVCPADIATYNVIIQSLGKMGRADLASAVLDKLIEQGGYL--DLVMYNT 692
Query: 252 LIHVLWLLGKVNDAVVVWEELKGSSGLEPDAYTYRTVIQGCAKAYRINDAIKVFSEMQYN 73
LI+ L G++++ +++++ +SG+ PD TY T+I+ KA ++ DA K M
Sbjct: 693 LINALGKAGRIDEVNKFFDQMR-ASGINPDVITYNTLIEVHTKAGQLKDAYKFLKMMLDA 751
Query: 72 GIRPDTIVYNSLRWIAQGKKVDR 4
G P+ + +L ++ GK++++
Sbjct: 752 GCIPNHVTDTTLDFL--GKEIEK 772