BLASTX nr result
ID: Atropa21_contig00008754
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00008754 (829 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 486 e-135 ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 486 e-135 gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotia... 481 e-133 gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus... 475 e-132 ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 474 e-131 ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 473 e-131 ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su... 472 e-131 gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus pe... 472 e-131 gb|ESW10701.1| hypothetical protein PHAVU_009G230400g [Phaseolus... 472 e-131 ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 471 e-130 gb|EOY28254.1| DNA-directed RNA polymerase family protein isofor... 471 e-130 gb|EOY28253.1| DNA-directed RNA polymerase family protein isofor... 471 e-130 ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 471 e-130 gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 471 e-130 gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia... 471 e-130 gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanth... 470 e-130 gb|AAZ08459.1| RNA polymerase II second largest subunit [Astilbe... 469 e-130 ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 469 e-130 ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 469 e-130 gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 468 e-130 >ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum tuberosum] Length = 1191 Score = 486 bits (1251), Expect = e-135 Identities = 241/275 (87%), Positives = 243/275 (88%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDM VNTEVGVVRDIR Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 610 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQTLQQRESP+EGGWHDLVAKG Sbjct: 611 LKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDT 670 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARLN GDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 671 EEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 765 >ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum] gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName: Full=DNA-directed RNA polymerase II subunit RPB2; Short=RNA polymerase II subunit 2; Short=RNA polymerase II subunit B2; AltName: Full=DNA-directed RNA polymerase II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA polymerase II subunit 2 [Solanum lycopersicum] Length = 1191 Score = 486 bits (1251), Expect = e-135 Identities = 241/275 (87%), Positives = 243/275 (88%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDM VNTEVGVVRDIR Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 610 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQTLQQRESP+EGGWHDLVAKG Sbjct: 611 LKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDT 670 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARLN GDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 671 EEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 765 >gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotiana sylvestris] Length = 1087 Score = 481 bits (1239), Expect = e-133 Identities = 240/275 (87%), Positives = 241/275 (87%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 394 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 453 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDM VNTEVGVVRDIR Sbjct: 454 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 513 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKG Sbjct: 514 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDT 573 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDL QARLN +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 574 EEEETTMISMTINDLXQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 633 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 634 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 668 >gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris] Length = 1194 Score = 475 bits (1222), Expect = e-132 Identities = 235/275 (85%), Positives = 240/275 (87%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG+W+GIHRDPDM VNTEVGVVRDIR Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIR 613 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIV+KQRLLIKK+DI LQQRESPEEGGWHDLV+KG Sbjct: 614 LKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDT 673 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARLN DAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 674 EEEETTMISMTINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 768 >ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer arietinum] Length = 1194 Score = 474 bits (1220), Expect = e-131 Identities = 235/275 (85%), Positives = 240/275 (87%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG W+GIHRDPDM VNTEVGVVRDIR Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIR 613 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRESPEEGGWHDLV+KG Sbjct: 614 LKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGFIEYIDT 673 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARLN +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 674 EEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 768 >ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine max] Length = 1192 Score = 473 bits (1218), Expect = e-131 Identities = 234/275 (85%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG W+GIHRDPDM VNTEVGVVRDIR Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIR 613 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRESPE+GGWHDLV+KG Sbjct: 614 LKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDT 673 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQAR+N DAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 674 EEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 768 >ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria vesca subsp. vesca] Length = 1191 Score = 472 bits (1215), Expect = e-131 Identities = 234/275 (85%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDP+M VNTEVGVVRDIR Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVRTLRKLRRRVDVNTEVGVVRDIR 610 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PE+GGWHDLVAKG Sbjct: 611 LKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGFIEYIDT 670 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARLN +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 671 EEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 765 >gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica] Length = 1192 Score = 472 bits (1215), Expect = e-131 Identities = 234/275 (85%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDP+M VNTEVGVVRDIR Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRKLRRRVDVNTEVGVVRDIR 610 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PE+GGWHDLVAKG Sbjct: 611 LKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGFIEYIDT 670 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARLN +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 671 EEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 765 >gb|ESW10701.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris] Length = 1196 Score = 472 bits (1214), Expect = e-131 Identities = 233/275 (84%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 492 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 551 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG W+GIHRDPDM VNTEVGVVRDIR Sbjct: 552 WGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIR 611 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIV++QRLLIKKKDI LQQRESPEEGGWHDLV+KG Sbjct: 612 LKELRIYTDYGRCSRPLFIVDRQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDT 671 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQAR+N +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 672 EEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 731 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 732 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 766 >ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] Length = 1194 Score = 471 bits (1213), Expect = e-130 Identities = 235/275 (85%), Positives = 238/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDPDM VNTEVGVVRDIR Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIR 613 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI LQQRES EEGGWHDLVAKG Sbjct: 614 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDT 673 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 I+DLVQAR+N +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 674 EEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 768 >gb|EOY28254.1| DNA-directed RNA polymerase family protein isoform 2 [Theobroma cacao] Length = 809 Score = 471 bits (1212), Expect = e-130 Identities = 233/275 (84%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 141 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 200 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVG+HR+PDM VNTEVGVVRDIR Sbjct: 201 WGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIR 260 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI LQQRESPE+GGWHDLVAKG Sbjct: 261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDT 320 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQAR+N +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 321 EEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 380 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 381 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 415 >gb|EOY28253.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma cacao] Length = 1189 Score = 471 bits (1212), Expect = e-130 Identities = 233/275 (84%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVG+HR+PDM VNTEVGVVRDIR Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIR 610 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI LQQRESPE+GGWHDLVAKG Sbjct: 611 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDT 670 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQAR+N +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 671 EEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 765 >ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis sativus] gi|449479313|ref|XP_004155566.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis sativus] Length = 1199 Score = 471 bits (1212), Expect = e-130 Identities = 233/275 (84%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 499 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 558 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDP+M VNTEVGVVRDIR Sbjct: 559 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIR 618 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI LQQRESPE+GGWHDLVAKG Sbjct: 619 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDT 678 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 I+DL+QAR+N +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 679 EEEETTMISMTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 738 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 739 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 773 >gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum] Length = 1191 Score = 471 bits (1212), Expect = e-130 Identities = 233/275 (84%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDPDM VNTEVGVVRDIR Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 610 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIK+KDIQ LQQRE+PE+GGWHDLVAKG Sbjct: 611 LKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDT 670 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLV ARLN +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 671 EEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDT+AYVLYYPQKPL Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPL 765 >gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida] Length = 1195 Score = 471 bits (1211), Expect = e-130 Identities = 234/275 (85%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 495 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 554 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 GTENFEEISPAVIPQATKIFV+GTW+GIHRDPDM VNTEVGVVRDIR Sbjct: 555 XGTENFEEISPAVIPQATKIFVBGTWMGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 614 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQ+LLIKKKDIQ LQQRE+PEEGGWHDLVAKG Sbjct: 615 LKELRIYTDYGRCSRPLFIVEKQKLLIKKKDIQQLQQRETPEEGGWHDLVAKGYIEYIDT 674 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQA +N DAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 675 EEEETTMISMTINDLVQASINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 734 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 735 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 769 >gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanthus californicus] Length = 733 Score = 470 bits (1210), Expect = e-130 Identities = 233/275 (84%), Positives = 237/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 33 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 92 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDPDM VNTEVGVVRDIR Sbjct: 93 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIR 152 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVE QRLLIKK+DIQ LQQRESPE+GGWHDLV+KG Sbjct: 153 LKELRIYTDYGRCSRPLFIVENQRLLIKKRDIQALQQRESPEDGGWHDLVSKGYIEYIDT 212 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLV AR N +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 213 EEEETTMISMTINDLVSARANKKEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 272 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 273 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 307 >gb|AAZ08459.1| RNA polymerase II second largest subunit [Astilbe sp. Yoshikawa s.n.] Length = 951 Score = 469 bits (1208), Expect = e-130 Identities = 233/275 (84%), Positives = 238/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 387 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 446 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIP+ATKIFVNG WVGIHRDPDM VNTEVGVVRDIR Sbjct: 447 WGTENFEEISPAVIPEATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIR 506 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRE+PE+GGWHDLVAKG Sbjct: 507 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPEDGGWHDLVAKGFIEYVDT 566 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLV ARLN +AYS+ YTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 567 EEEETTMISMTINDLVSARLNPEEAYSEYYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 626 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 627 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 661 >ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus sinensis] Length = 1195 Score = 469 bits (1207), Expect = e-130 Identities = 233/275 (84%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDP+M VNTEVGVVRDIR Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIR 613 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI LQQRESPE+GGWHDLVAKG Sbjct: 614 LKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDT 673 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARL+ +AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 674 EEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 768 >ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina] gi|557525528|gb|ESR36834.1| hypothetical protein CICLE_v10027701mg [Citrus clementina] Length = 1195 Score = 469 bits (1207), Expect = e-130 Identities = 233/275 (84%), Positives = 239/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDP+M VNTEVGVVRDIR Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIR 613 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI LQQRESPE+GGWHDLVAKG Sbjct: 614 LKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDT 673 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARL+ +AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 674 EEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 768 >gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis] Length = 1193 Score = 468 bits (1205), Expect = e-130 Identities = 232/275 (84%), Positives = 238/275 (86%) Frame = -3 Query: 827 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 648 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE Sbjct: 492 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 551 Query: 647 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIR 468 WGTENFEEISPAVIPQATKIFVNG WVGIHRDPDM VNTEVGVVRDIR Sbjct: 552 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIR 611 Query: 467 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGXXXXXXX 288 LKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI+ LQQRE+PEE GWHDLV+ G Sbjct: 612 LKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDT 671 Query: 287 XXXXXXXXXXXINDLVQARLNSGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 108 INDLVQARLN +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT Sbjct: 672 EEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 731 Query: 107 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 3 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL Sbjct: 732 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 766