BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00008667
         (1638 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   573   e-160
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   572   e-160
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              359   2e-96
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   356   1e-95
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        353   1e-94
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   348   3e-93
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     348   4e-93
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   347   7e-93
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   338   3e-90
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   328   4e-87
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   325   3e-86
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   316   2e-83
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   309   2e-81
gb|EPS64499.1| sigma factor, partial [Genlisea aurea]                 306   2e-80
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   306   2e-80
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   300   9e-79
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   300   1e-78
ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Caps...   300   1e-78
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      298   3e-78
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   298   5e-78

>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  573 bits (1476), Expect = e-160
 Identities = 316/458 (68%), Positives = 328/458 (71%), Gaps = 2/458 (0%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXXXXXLG 448
            MSYLLPQF SLPD FVICAKTQQQTTIQLSK RD I+LRTQCIL              LG
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 449  IEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTG 628
            IEKLQLPSIEILSNSVAAERSWK PS AT+ V +IQKLKL S EANPDSVAPDRPWTYTG
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPDIQKLKLPSFEANPDSVAPDRPWTYTG 120

Query: 629  AVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKNS 808
            AVGPP EANTK     EN                        KGAQDAVMLV  +NL +S
Sbjct: 121  AVGPPAEANTKP----ENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLNDS 176

Query: 809  NNVGRCTLSEARTSPFESVHLAQPGEIGSVG--AELKVSEMKWXXXXXXXXXXXXXXGVE 982
            +NVGR TLSEART+PFESVHLAQPGE   VG  AEL  SEMKW               +E
Sbjct: 177  DNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLTDSDDLE 236

Query: 983  PSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQE 1162
            PSPEELE+LQSQLSN IAVKSNRQTE                             A VQ+
Sbjct: 237  PSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQD 296

Query: 1163 VDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWAA 1342
            VDYSDPLRYLRGTT  SRLLTASEEQELS GIQD              CGGQPTF+QWAA
Sbjct: 297  VDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAA 356

Query: 1343 AAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGA 1522
            AAGVDQ TLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGA
Sbjct: 357  AAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGA 416

Query: 1523 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPF
Sbjct: 417  EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPF 454


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  572 bits (1474), Expect = e-160
 Identities = 318/460 (69%), Positives = 331/460 (71%), Gaps = 4/460 (0%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXXXXXLG 448
            MSYLLPQF SLPD FVICAKTQQQTTIQLSK RD I+LRTQCIL              LG
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 449  IEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTG 628
            IEKLQLPSIEILSNSVAAERSWK PS AT+ V  IQKLKL S EANPDSVAPDRPWTYTG
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPGIQKLKLPSFEANPDSVAPDRPWTYTG 120

Query: 629  AVGPPTEANTKT--ALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLK 802
            AVGPP EANTK   +LA+E                         KGAQDAVMLV  +NLK
Sbjct: 121  AVGPPAEANTKPEDSLASEE------AIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLK 174

Query: 803  NSNNVGRCTLSEARTSPFESVHLAQPGEIGSVG--AELKVSEMKWXXXXXXXXXXXXXXG 976
            +S+NVGR TLSEART+PFESVHLAQPGE   VG  AEL  SEMKW               
Sbjct: 175  DSDNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDD 234

Query: 977  VEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALV 1156
            +EPS EELE+LQSQLSN IAVKSNRQTE                             A V
Sbjct: 235  LEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRASV 294

Query: 1157 QEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQW 1336
            Q+VDYSDPLRYLRGTT  SRLLTASEEQELS GIQD              CGGQPTF+QW
Sbjct: 295  QDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQW 354

Query: 1337 AAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 1516
            AAAAGVDQ TLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR
Sbjct: 355  AAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 414

Query: 1517 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 415  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 454


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  359 bits (922), Expect = 2e-96
 Identities = 223/460 (48%), Positives = 258/460 (56%), Gaps = 4/460 (0%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXXXXXLG 448
            MS LLPQF+  PDTF     T  +  I LSK R+ I  R QC L                
Sbjct: 1    MSCLLPQFKCPPDTF----STHPKLHI-LSKNREAIYFRVQCAL---------------- 39

Query: 449  IEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTG 628
                                +  P ST+T+AVL+I+KL+L SLE++ +SVA  RPWTY G
Sbjct: 40   ------------------STTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIG 81

Query: 629  AVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKNS 808
             VGPPTEAN +  LA E                         K A+DA  LV ++N   S
Sbjct: 82   VVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKS 141

Query: 809  NNVGRCTLSEARTSPFESVHLAQPGEIG----SVGAELKVSEMKWXXXXXXXXXXXXXXG 976
                   LS   TS F  +   +   IG    SVGAE  + +                  
Sbjct: 142  ETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYN-----SLQDVTEDSDD 196

Query: 977  VEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALV 1156
            +EP+ EELE+L+++ S +I V+SNRQ E                               +
Sbjct: 197  LEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSL 256

Query: 1157 QEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQW 1336
            QEVDYSDPLRYLRGTTS SRLLTA+EE ELS GIQD               G +PTF+QW
Sbjct: 257  QEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQW 316

Query: 1337 AAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 1516
            AAAAGVDQKTLR+R NYGI CKDKMIKSN+RLVISIAKNYQG GMN+QDLVQEGCRGLVR
Sbjct: 317  AAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVR 376

Query: 1517 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 377  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 416


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  356 bits (914), Expect = 1e-95
 Identities = 220/460 (47%), Positives = 255/460 (55%), Gaps = 4/460 (0%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXXXXXLG 448
            MS LLPQF+  PDTF    K       +  K R+ I  R QC L                
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLH--ILCKSPKNREAIYFRVQCAL---------------- 42

Query: 449  IEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTG 628
                                +  P ST+T+AVL+I+KL+L SLE++ +SVA  RPWTY G
Sbjct: 43   ------------------STTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIG 84

Query: 629  AVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKNS 808
             VGPPTEAN +  LA E                         K A+DA  LV ++N   S
Sbjct: 85   VVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKS 144

Query: 809  NNVGRCTLSEARTSPFESVHLAQPGEIG----SVGAELKVSEMKWXXXXXXXXXXXXXXG 976
                   LS   TS F  +   +   IG    SVGAE  + +                  
Sbjct: 145  ETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYN-----SLQDVTEDSDD 199

Query: 977  VEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALV 1156
            +EP+ EELE+L+++ S +I V+SNRQ E                               +
Sbjct: 200  LEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSL 259

Query: 1157 QEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQW 1336
            QEVDYSDPLRYLRGTTS SRLLTA+EE ELS GIQD               G +PTF+QW
Sbjct: 260  QEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQW 319

Query: 1337 AAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 1516
            AAAAGVDQKTLR+R NYGI CKDKMIKSN+RLVISIAKNYQG GMN+QDLVQEGCRGLVR
Sbjct: 320  AAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVR 379

Query: 1517 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 380  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 419


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  353 bits (906), Expect = 1e-94
 Identities = 217/457 (47%), Positives = 258/457 (56%), Gaps = 1/457 (0%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLS-KGRDQINLRTQCILXXXXXXXXXXXXXXL 445
            MS LLPQF+  PDTF I  +T       ++  G  +     QC                +
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60

Query: 446  GIEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYT 625
             + K +   I   +  V +  S    +TAT AVL+++KL+L S EA+P+SVA DRPWTY 
Sbjct: 61   VLAKHK-EHICFRTQCVLSTTSSSTSTTAT-AVLDVEKLRLPSFEAHPNSVAVDRPWTYI 118

Query: 626  GAVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKN 805
            GA GPP+EA+    LAT+N                        K A+DA ++   +N   
Sbjct: 119  GATGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMA--ENYNY 176

Query: 806  SNNVGRCTLSEARTSPFESVHLAQPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXXGVEP 985
            +    +  +S A  S      L    E   +  +    E +                +EP
Sbjct: 177  AKTEMKSGVSFATDSFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEP 236

Query: 986  SPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQEV 1165
            + EELE L+ QLS +IAV+S RQTE                               +Q+V
Sbjct: 237  TNEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDV 296

Query: 1166 DYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWAAA 1345
            DYSDPLRYLRGTTS SRLLTA+EE ELS GIQD              CGGQPTF+QWAAA
Sbjct: 297  DYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAA 356

Query: 1346 AGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAE 1525
            AGVDQKTLR RLNYG+ CKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAE
Sbjct: 357  AGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 416

Query: 1526 KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 417  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 453


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  348 bits (894), Expect = 3e-93
 Identities = 219/461 (47%), Positives = 257/461 (55%), Gaps = 3/461 (0%)
 Frame = +2

Query: 263  KKMSYLLPQFQSLPDTFVICAKT---QQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXX 433
            K MS LLPQF+  PDTF I  +T    Q  +   SK ++ I  RT C+L           
Sbjct: 22   KNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTS------- 74

Query: 434  XXXLGIEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRP 613
                       PS                 STA + VL+++KL+L SLEA+ ++VA +R 
Sbjct: 75   -----------PST----------------STAMTTVLDVEKLRLPSLEAHSNAVAANRQ 107

Query: 614  WTYTGAVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQD 793
            WTY GAVGP TE N  T+LATE                         K A+DA ++V   
Sbjct: 108  WTYFGAVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAV-KVAKDAALMVNHH 166

Query: 794  NLKNSNNVGRCTLSEARTSPFESVHLAQPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXX 973
            N     +    +LS A TS      L +      +G  + V E                 
Sbjct: 167  NSAKPKSKPAISLS-ADTSTSMWAQLTERERASIIGDSVIV-EAAPEEEYSEQQPLNKSA 224

Query: 974  GVEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAL 1153
             +EP+ EEL++L+ Q+S +IAV+S RQTE                               
Sbjct: 225  DLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPS 284

Query: 1154 VQEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQ 1333
            VQEVDYSDPLRYLR TTS SRLLTA+EE +LS GIQD              CGG PTF+Q
Sbjct: 285  VQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQ 344

Query: 1334 WAAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLV 1513
            WAAAAGVDQ+ LR+RLNYGILCKDKMI SN+RLVISIAKNYQG GMNLQDLVQEGCRGLV
Sbjct: 345  WAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 404

Query: 1514 RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 405  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 445


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  348 bits (893), Expect = 4e-93
 Identities = 220/458 (48%), Positives = 253/458 (55%), Gaps = 2/458 (0%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXXXXXLG 448
            MS LLPQF   PDTF                   Q N RT                  L 
Sbjct: 1    MSCLLPQFNCKPDTFSA-----------------QFNFRTHS----------------LP 27

Query: 449  IEKLQLPSIEILSNSVAAERSWKPPSTATSA--VLNIQKLKLLSLEANPDSVAPDRPWTY 622
                 LP    +++      S   PST+  A  VL+++KL+  SL+AN +SV  +RPWTY
Sbjct: 28   TPNSHLPKARDINSLAQCVLSTTSPSTSVGATYVLSVEKLRFPSLDANSESVTSNRPWTY 87

Query: 623  TGAVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLK 802
            TGA GPP EAN +  LATE                         K A+DA +LV      
Sbjct: 88   TGATGPPVEANFEATLATETLLTSEEAVIAAAAAEAVTLAKAAVKVAKDAALLVRPSTRA 147

Query: 803  NSNNVGRCTLSEARTSPFESVHLAQPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXXGVE 982
             S ++     SEAR     ++  AQ      V   L+ +EM                 ++
Sbjct: 148  ESISL---VSSEAR-----NIKTAQAAS--RVRDSLR-AEMALIEDHPPKDAAKESNDLQ 196

Query: 983  PSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQE 1162
            P+ EEL +LQ QLS +IAV+S RQ+E                             A VQ+
Sbjct: 197  PTNEELRILQEQLSKSIAVRSRRQSERKAKRDRAAEKAAANVVAVKSGSNSRKKRASVQD 256

Query: 1163 VDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWAA 1342
            VD+SDPLRYLR TTS SRLLTA+EE ELS GIQD              CGG PTF+QWAA
Sbjct: 257  VDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAA 316

Query: 1343 AAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGA 1522
            AAGVDQKTLR+R+NYGILCKDKMIKSNVRLVISIAKNYQG GMNLQDLVQEGCRGLVRGA
Sbjct: 317  AAGVDQKTLRRRINYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 376

Query: 1523 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 377  EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 414


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  347 bits (891), Expect = 7e-93
 Identities = 218/461 (47%), Positives = 257/461 (55%), Gaps = 3/461 (0%)
 Frame = +2

Query: 263  KKMSYLLPQFQSLPDTFVICAKT---QQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXX 433
            K MS LLPQF+  PDTF I  +T    Q  +   SK ++ I  RT C+L           
Sbjct: 22   KNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTS------- 74

Query: 434  XXXLGIEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRP 613
                       PS                 STA + VL+++KL+L SLEA+ ++VA +R 
Sbjct: 75   -----------PST----------------STAMTTVLDVEKLRLPSLEAHSNAVAANRQ 107

Query: 614  WTYTGAVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQD 793
            WTY GAVGP TE N  T+LATE                         K A+DA ++V   
Sbjct: 108  WTYFGAVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAV-KVAKDAALMVNHH 166

Query: 794  NLKNSNNVGRCTLSEARTSPFESVHLAQPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXX 973
            N     +    +LS A T+      L +      +G  + V E                 
Sbjct: 167  NSAKPKSKPAISLS-ADTNTSMWAQLTERERASIIGDSVIV-EAAPEEEYSEQQPLNKSA 224

Query: 974  GVEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAL 1153
             +EP+ EEL++L+ Q+S +IAV+S RQTE                               
Sbjct: 225  DLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPS 284

Query: 1154 VQEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQ 1333
            VQEVDYSDPLRYLR TTS SRLLTA+EE +LS GIQD              CGG PTF+Q
Sbjct: 285  VQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQ 344

Query: 1334 WAAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLV 1513
            WAAAAGVDQ+ LR+RLNYGILCKDKMI SN+RLVISIAKNYQG GMNLQDLVQEGCRGLV
Sbjct: 345  WAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 404

Query: 1514 RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 405  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 445


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  338 bits (868), Expect = 3e-90
 Identities = 196/374 (52%), Positives = 228/374 (60%), Gaps = 3/374 (0%)
 Frame = +2

Query: 524  STATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTGAVGPPTEANTKTALATENFXXXXXX 703
            ST T+ +L++++  L SL  N DS+  +RPWTYTGA+GPPTEAN   ALATE        
Sbjct: 89   STPTATLLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGPPTEANYGAALATETLLTSEEA 148

Query: 704  XXXXXXXXXXXXXXXXXKGAQDAVMLVCQDN---LKNSNNVGRCTLSEARTSPFESVHLA 874
                             K A+D  +LV  ++   ++NS+ V  C  S    +  + +   
Sbjct: 149  VIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSSPVS-CGTSAFHINWAQHLETE 207

Query: 875  QPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXXGVEPSPEELEVLQSQLSNAIAVKSNRQ 1054
                IG   A    SE                  VEP+ EE E+LQ QLSN IA +S+RQ
Sbjct: 208  PTLRIGDSMA----SETALVEDHFLQIAINESENVEPANEEFELLQEQLSNGIAARSSRQ 263

Query: 1055 TEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQEVDYSDPLRYLRGTTSGSRLLTASE 1234
            TE                             A +Q+VD+SDPLRYLR TT  SRLLTA+E
Sbjct: 264  TERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANE 323

Query: 1235 EQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWAAAAGVDQKTLRKRLNYGILCKDKMI 1414
            E ELS GIQ+              CG QPTF+QWAAAAGVDQKTLRKR+NYGI+CKDKMI
Sbjct: 324  EIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGIMCKDKMI 383

Query: 1415 KSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVR 1594
            KSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVR
Sbjct: 384  KSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVR 443

Query: 1595 KSLSDQSRTIRLPF 1636
            KSLSDQSRTIRLPF
Sbjct: 444  KSLSDQSRTIRLPF 457


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  328 bits (841), Expect = 4e-87
 Identities = 191/367 (52%), Positives = 224/367 (61%)
 Frame = +2

Query: 536  SAVLNIQKLKLLSLEANPDSVAPDRPWTYTGAVGPPTEANTKTALATENFXXXXXXXXXX 715
            + VL+++KL+L SLEA+ ++VA +R WTY GAVGP TE N  T+LATE            
Sbjct: 2    TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61

Query: 716  XXXXXXXXXXXXXKGAQDAVMLVCQDNLKNSNNVGRCTLSEARTSPFESVHLAQPGEIGS 895
                         K A+DA ++V   N     +    +LS A T+      L +      
Sbjct: 62   SAEAVALARAAV-KVAKDAALMVNHHNSAKPKSKPAISLS-ADTNTSMWAQLTERERASI 119

Query: 896  VGAELKVSEMKWXXXXXXXXXXXXXXGVEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXX 1075
            +G  + V E                  +EP+ EEL++L+ Q+S +IAV+S RQTE     
Sbjct: 120  IGDSVIV-EAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARR 178

Query: 1076 XXXXXXXXXXXXXXXXXXXXXXXXALVQEVDYSDPLRYLRGTTSGSRLLTASEEQELSGG 1255
                                      VQEVDYSDPLRYLR TTS SRLLTA+EE +LS G
Sbjct: 179  TRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAG 238

Query: 1256 IQDXXXXXXXXXXXXXXCGGQPTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLV 1435
            IQD              CGG PTF+QWAAAAGVDQ+ LR+RLNYGILCKDKMI SN+RLV
Sbjct: 239  IQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLV 298

Query: 1436 ISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 1615
            ISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 299  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 358

Query: 1616 RTIRLPF 1636
            RTIRLPF
Sbjct: 359  RTIRLPF 365


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  325 bits (833), Expect = 3e-86
 Identities = 214/474 (45%), Positives = 250/474 (52%), Gaps = 18/474 (3%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQ---QTTIQLSKGRDQINLRTQCILXXXXXXXXXXXXX 439
            MS LLPQF+  PDTF I  +          Q +K R+ I  R QCIL             
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCIL------------- 48

Query: 440  XLGIEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWT 619
                                   S   PST+T AVL+++KL+L S EA  DS+AP+ PWT
Sbjct: 49   -----------------------STTSPSTST-AVLDLEKLRLPSFEAPSDSIAPNSPWT 84

Query: 620  YTGAVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNL 799
            Y         A   + LATE                         K A+DA +LV   N 
Sbjct: 85   Y---------ATFGSTLATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLV--KNF 133

Query: 800  KNSNNVGRCT----LSEARTSPFESVHLAQ-----------PGEIGSVGAELKVSEMKWX 934
             ++    + T    +  +R   F     A+           P E  S+ + +K S+    
Sbjct: 134  PSAETESKLTSPSTIDASRWPQFTETERARIIGDSVATETGPREESSMQSSIKESDY--- 190

Query: 935  XXXXXXXXXXXXXGVEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXX 1114
                          +E + +ELE+LQ QLS  IAV+S RQTE                  
Sbjct: 191  --------------LELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVS 236

Query: 1115 XXXXXXXXXXXALVQEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXX 1294
                         +QEVDYSDPLRYLRGTTS SRLLTASEE ELS  IQD          
Sbjct: 237  VKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEE 296

Query: 1295 XXXXCGGQPTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMN 1474
                 GGQPTF+QWAAAAGVDQ+TLRKR+N+G +CKDKMIKSN+RLVISIAKNYQG GMN
Sbjct: 297  LAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMN 356

Query: 1475 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 357  LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 410


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  316 bits (810), Expect = 2e-83
 Identities = 203/459 (44%), Positives = 247/459 (53%), Gaps = 3/459 (0%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXXXXXLG 448
            MS LLPQF+  PDTF +  +  Q                                    G
Sbjct: 1    MSCLLPQFKCQPDTFSVHFRNLQHH----------------------------------G 26

Query: 449  IEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTG 628
                QLP   + S S         PSTA   VL+++KL+L SLE + DS++ +RPWTY G
Sbjct: 27   TNHTQLPQCVLSSAS---------PSTA---VLDLEKLRLPSLEPHSDSISANRPWTYIG 74

Query: 629  AVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDN-LKN 805
             +GP  +    T+LA E                         K A+DA  +    + +K 
Sbjct: 75   GIGPQKKPPFGTSLAAETLIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSFMKK 134

Query: 806  SNNVGRCTLSEARTSPFESVHLAQPGEI--GSVGAELKVSEMKWXXXXXXXXXXXXXXGV 979
               +   + +++ +S +  +   +  +I   SV AE ++ E                  +
Sbjct: 135  ETKIPIASTTDSFSSMWSLLTEKERADIIGDSVSAETRLRE-----EYSVQYPTEEYDCL 189

Query: 980  EPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQ 1159
            EP+ EEL +LQ QLS  IAV+S RQTE                               +Q
Sbjct: 190  EPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQ 249

Query: 1160 EVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWA 1339
            EVD SDPLR+ RG +S SRLL+A+EE ELS GIQD               GG+P+F+QWA
Sbjct: 250  EVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWA 309

Query: 1340 AAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 1519
            AAAGVDQ TLRKRLNYGILCKDKMIKSNVRLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 310  AAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRG 369

Query: 1520 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            AEKFDASKGFKFSTYAHWWIKQAVRKSLSD+SRTIRLPF
Sbjct: 370  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPF 408


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  309 bits (792), Expect = 2e-81
 Identities = 210/470 (44%), Positives = 249/470 (52%), Gaps = 14/470 (2%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLS----------KGRDQINLRTQCILXXXXXX 418
            MS LLPQF+  P+TF I  KT    +   S          K RD  +LRTQCIL      
Sbjct: 1    MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCIL------ 54

Query: 419  XXXXXXXXLGIEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSV 598
                                    S A+     P ST T+  L++ +LKL   + N DSV
Sbjct: 55   ------------------------SAASP----PTSTGTATTLDVDRLKLPPFDTNTDSV 86

Query: 599  APDRPWTYTGAVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVM 778
            + +R  +Y GAV    E++  + L T                          K A+DA +
Sbjct: 87   SVERLRSYLGAV----ESSLASTLLTSE-----EASIAAAAAEAVTLAKAAVKVARDAAL 137

Query: 779  LVCQDNLKNSNNVGRCTLSEARTSP----FESVHLAQPGEIGSVGAELKVSEMKWXXXXX 946
            L    N  NS+  G  T S++   P    F+     +      +G  + V++        
Sbjct: 138  LA---NNINSSRAG--TKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL 192

Query: 947  XXXXXXXXXGVEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXX 1126
                      +EP+ EELE+LQ +LS +I VKS RQTE                      
Sbjct: 193  EPSTTESDD-MEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSG 251

Query: 1127 XXXXXXXALVQEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXX 1306
                     VQEVDYSDPLRYLR TT+ SRLLTA+EE ELS GIQD              
Sbjct: 252  SSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGER 311

Query: 1307 CGGQPTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDL 1486
             G +PTF+QWAAAAGV+Q+TLRKRLNYG LCKDKMIKSN+RLVISIAKNYQG GMNLQDL
Sbjct: 312  YGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDL 371

Query: 1487 VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPF
Sbjct: 372  VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF 421


>gb|EPS64499.1| sigma factor, partial [Genlisea aurea]
          Length = 431

 Score =  306 bits (784), Expect = 2e-80
 Identities = 200/461 (43%), Positives = 255/461 (55%), Gaps = 6/461 (1%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICAKTQQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXXXXXLG 448
            MS L+PQF+  PD F +  K + Q+ +  SK  + I+ +T C L              + 
Sbjct: 1    MSCLVPQFKCPPDIFAV--KFRSQSHLHTSKRTEGIDFQTNCALITTPPPTSV-----ID 53

Query: 449  IEKLQLPSI--EILSNSVAAERSW-KPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWT 619
             EKL+L S     + NS   + SW +  S   +A+L+++K+   SL+A P  +A D+ WT
Sbjct: 54   FEKLKLSSSLEAAIPNSSLNDGSWIERTSALKTALLDLEKIP--SLDAYPVPLASDQTWT 111

Query: 620  YTGAVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNL 799
            Y G +G P++   K +L T                          + A+DA +++     
Sbjct: 112  YVGGIGSPSQVLDKESLLTSE-----EAIIAAAASEALALAKAAVQVAKDAAVII----- 161

Query: 800  KNSNNVGRCTLSEARTSPFESVHLAQPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXXGV 979
               NN      + A T     V  +  G+ G+       +++ W               V
Sbjct: 162  ---NNRKSIKPNGAETGTLPIVEASSVGKNGT-------TKLHWSGRDCSSMHEESDD-V 210

Query: 980  EPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AL 1153
            EP+ EELE+L+ QLS  I V+S RQTE                               + 
Sbjct: 211  EPAAEELEILEVQLSENITVRSKRQTERKDRRTRAAEKMSATTILPLKSSTSSARKKRSP 270

Query: 1154 VQEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXC-GGQPTFS 1330
            VQE+D+SDPLRYLRG T+ S+LL ASEEQELS GIQ                 GG+PTFS
Sbjct: 271  VQEIDHSDPLRYLRGITTSSKLLNASEEQELSKGIQVLLKLERLHEELKKRFDGGEPTFS 330

Query: 1331 QWAAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGL 1510
            QWA+AAGVDQKTLRK+LN+G LCKD+MIKSN+RLV+SIAKNYQG GMNLQDLVQEGCRGL
Sbjct: 331  QWASAAGVDQKTLRKQLNHGTLCKDRMIKSNLRLVVSIAKNYQGCGMNLQDLVQEGCRGL 390

Query: 1511 VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1633
            VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD SRTIRLP
Sbjct: 391  VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDHSRTIRLP 431


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  306 bits (783), Expect = 2e-80
 Identities = 187/378 (49%), Positives = 222/378 (58%), Gaps = 6/378 (1%)
 Frame = +2

Query: 521  PSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTGAVGPPTEANTKTALATENFXXXXX 700
            PST+T AVLN++KL+L SLE++ DS+A +RPWTY G +GPP E    T+LATE       
Sbjct: 28   PSTST-AVLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPPKEPLFGTSLATETLIINDE 86

Query: 701  XXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKNSNNVGRCTLSEARTSPFESVHLAQP 880
                              K A+DA  +    N  + N   +  ++    S F S+     
Sbjct: 87   AVIAAAAAEAVALARAAVKVAKDAAEMA--KNYCSVNTETKIPIASTADS-FSSMWCLLT 143

Query: 881  GE-----IG-SVGAELKVSEMKWXXXXXXXXXXXXXXGVEPSPEELEVLQSQLSNAIAVK 1042
            G+     IG S  AE  + E                    P+ EEL +L+ QLS +I V+
Sbjct: 144  GKERADIIGVSFSAETGLRE-----ECSTQYPTEESDCFGPTHEELALLEKQLSESIVVR 198

Query: 1043 SNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQEVDYSDPLRYLRGTTSGSRLL 1222
            S RQT+                               VQEVD SDPLR+ RG ++ SRLL
Sbjct: 199  SKRQTQRKAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSDPLRFFRGASTSSRLL 258

Query: 1223 TASEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWAAAAGVDQKTLRKRLNYGILCK 1402
            +A+EE ELS GIQD               GG+PTF+QWAAAA VDQ TLRKRLNY ILCK
Sbjct: 259  SATEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVDQITLRKRLNYAILCK 318

Query: 1403 DKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIK 1582
            DKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWI+
Sbjct: 319  DKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGVEKFDASKGFKFSTYAHWWIR 378

Query: 1583 QAVRKSLSDQSRTIRLPF 1636
            QAVR+SLSDQSRTIRLPF
Sbjct: 379  QAVRRSLSDQSRTIRLPF 396


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  300 bits (769), Expect = 9e-79
 Identities = 200/468 (42%), Positives = 241/468 (51%), Gaps = 13/468 (2%)
 Frame = +2

Query: 272  SYLLPQFQSLPDTFVICAKTQQQTTIQLSK-GRDQINLRTQCILXXXXXXXXXXXXXXLG 448
            S LLPQF+  PD+F I  KT    +  LSK  +  +  + QC +                
Sbjct: 3    SCLLPQFKCQPDSFSIHFKT----SYSLSKHNKGSVFFQPQCAV---------------- 42

Query: 449  IEKLQLPSIEILSNSVAAERSWKPPSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTG 628
                                S  PP    +++L++ KL+L S + + DS   DR WTYTG
Sbjct: 43   --------------------STSPP--LLTSMLDVAKLRLPSFDTDSDSRISDRQWTYTG 80

Query: 629  AVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKNS 808
             VGP TEA    ALA+E                         K A+DA       + +NS
Sbjct: 81   TVGPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDAT------SFRNS 134

Query: 809  NNVGRCTLSEARTSPFESVHLAQPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXXGVEPS 988
             N  +  +S A     +     +    G +G  L VS+                    P 
Sbjct: 135  YNT-KVVVSSAADKRSKWDQFTEKERAGILG-HLAVSDTGVVSDKSTAPAPAPAPAPAPD 192

Query: 989  ------------PEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXX 1132
                         +E+E+L+ QLS + AV+S RQTE                        
Sbjct: 193  CNNESSGDLKSEKQEVELLEEQLSVSSAVRSTRQTERKARRAKGLEKTASSMQSVKTGSS 252

Query: 1133 XXXXXALVQEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCG 1312
                 A  QEVD++DPLRYLR TTS S+LLTA EEQELS GIQD              CG
Sbjct: 253  SRKKRAPSQEVDHNDPLRYLRMTTSSSKLLTAREEQELSEGIQDLLKLERLQAELTERCG 312

Query: 1313 GQPTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQ 1492
             QPTF+QWA+AAGVDQK+LRKR+NYG  CKD+MIKSN+RLVISIAKNYQG GMNLQDLVQ
Sbjct: 313  HQPTFAQWASAAGVDQKSLRKRINYGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQ 372

Query: 1493 EGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            EGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPF
Sbjct: 373  EGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPF 420


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  300 bits (768), Expect = 1e-78
 Identities = 182/376 (48%), Positives = 214/376 (56%), Gaps = 4/376 (1%)
 Frame = +2

Query: 521  PSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTGAVGPPTEANTKTALATENFXXXXX 700
            P+  TS  L++ KL+L S + + DS   DR WTYTG VGP TEA    ALA+E       
Sbjct: 46   PALLTST-LDVAKLRLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDE 104

Query: 701  XXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKNSNNVGRCTLSEA--RTSPFESVHLA 874
                              K A+DA +       KNSNN      S A  R+   +     
Sbjct: 105  AVVAAAAAEAVALARAAVKVAKDATL------FKNSNNTNLLISSTADKRSKWDQFTEKE 158

Query: 875  QPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXXGVEPSPE--ELEVLQSQLSNAIAVKSN 1048
            + G +G     L VS+                   +   E  E+E+++ Q + ++AV+S 
Sbjct: 159  RAGILG----HLAVSDTGIVSDKSTAPASNKESSADLISEIQEVELVEEQPAASLAVRST 214

Query: 1049 RQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQEVDYSDPLRYLRGTTSGSRLLTA 1228
            RQTE                              + QEVD++DPLRYLR TTS S+LLT 
Sbjct: 215  RQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTV 274

Query: 1229 SEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWAAAAGVDQKTLRKRLNYGILCKDK 1408
             EE ELS GIQD              CG QPTFSQWA+AAGVDQK+LRKR+NYG  CKDK
Sbjct: 275  REEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDK 334

Query: 1409 MIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 1588
            MIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQA
Sbjct: 335  MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQA 394

Query: 1589 VRKSLSDQSRTIRLPF 1636
            VRKSLSDQSR IRLPF
Sbjct: 395  VRKSLSDQSRMIRLPF 410


>ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575836|gb|EOA40023.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 487

 Score =  300 bits (768), Expect = 1e-78
 Identities = 182/376 (48%), Positives = 214/376 (56%), Gaps = 4/376 (1%)
 Frame = +2

Query: 521  PSTATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTGAVGPPTEANTKTALATENFXXXXX 700
            P+  TS  L++ KL+L S + + DS   DR WTYTG VGP TEA    ALA+E       
Sbjct: 46   PALLTST-LDVAKLRLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDE 104

Query: 701  XXXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKNSNNVGRCTLSEA--RTSPFESVHLA 874
                              K A+DA +       KNSNN      S A  R+   +     
Sbjct: 105  AVVAAAAAEAVALARAAVKVAKDATL------FKNSNNTNLLISSTADKRSKWDQFTEKE 158

Query: 875  QPGEIGSVGAELKVSEMKWXXXXXXXXXXXXXXGVEPSPE--ELEVLQSQLSNAIAVKSN 1048
            + G +G     L VS+                   +   E  E+E+++ Q + ++AV+S 
Sbjct: 159  RAGILG----HLAVSDTGIVSDKSTAPASNKESSADLISEIQEVELVEEQPAASLAVRST 214

Query: 1049 RQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQEVDYSDPLRYLRGTTSGSRLLTA 1228
            RQTE                              + QEVD++DPLRYLR TTS S+LLT 
Sbjct: 215  RQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTV 274

Query: 1229 SEEQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWAAAAGVDQKTLRKRLNYGILCKDK 1408
             EE ELS GIQD              CG QPTFSQWA+AAGVDQK+LRKR+NYG  CKDK
Sbjct: 275  REEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDK 334

Query: 1409 MIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 1588
            MIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQA
Sbjct: 335  MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQA 394

Query: 1589 VRKSLSDQSRTIRLPF 1636
            VRKSLSDQSR IRLPF
Sbjct: 395  VRKSLSDQSRMIRLPF 410


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  298 bits (764), Expect = 3e-78
 Identities = 191/466 (40%), Positives = 241/466 (51%), Gaps = 10/466 (2%)
 Frame = +2

Query: 269  MSYLLPQFQSLPDTFVICA----KTQQQTTIQLSKGRDQINLRTQCILXXXXXXXXXXXX 436
            M+ LLPQF+  PDTF I +     +   +   L + RD +  R QC +            
Sbjct: 1    MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAV------------ 48

Query: 437  XXLGIEKLQLPSIEILSNSVAAERSWKPPSTATS--AVLNIQKLKLLSLEANPDSVAPDR 610
                                    S  PP TA +  ++ +++KL+L  +E+N +S++   
Sbjct: 49   ------------------------STPPPPTAAAETSIFDVEKLRLPYVESNSNSLSAFA 84

Query: 611  PWTYTGAVGPPTEANTKTALATENFXXXXXXXXXXXXXXXXXXXXXXXKGAQDAVMLVCQ 790
              T+   +G P E    TAL  +                         K A+DA ++   
Sbjct: 85   QSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAF- 143

Query: 791  DNLKNSNNVGRCTLSEARTSPFESVHLAQPGEIGSV----GAELKVSEMKWXXXXXXXXX 958
                NS      +  E ++  F    L +  ++GS+    G+E  + E            
Sbjct: 144  ----NSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLRE---------GDT 190

Query: 959  XXXXXGVEPSPEELEVLQSQLSNAIAVKSNRQTEXXXXXXXXXXXXXXXXXXXXXXXXXX 1138
                  +EP+ EEL++L+ +L  +I V+S RQ E                          
Sbjct: 191  VSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSR 250

Query: 1139 XXXALVQEVDYSDPLRYLRGTTSGSRLLTASEEQELSGGIQDXXXXXXXXXXXXXXCGGQ 1318
                 VQEVDYSDPLRYLRG T+ SRLLT+SEE ELS GIQD               G  
Sbjct: 251  KKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKS 310

Query: 1319 PTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEG 1498
            P+F QWAAAAG+DQ+TLR+RLN+G  CKDKMIKSNVRLVISIAKNYQG GMNLQDLVQEG
Sbjct: 311  PSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEG 370

Query: 1499 CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1636
            CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 371  CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 416


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  298 bits (763), Expect = 5e-78
 Identities = 181/374 (48%), Positives = 217/374 (58%), Gaps = 3/374 (0%)
 Frame = +2

Query: 524  STATSAVLNIQKLKLLSLEANPDSVAPDRPWTYTGAVGPPTEANTKTALATENFXXXXXX 703
            +T+ S +L+++K   L+L+A  D   P+  W Y  AV PP +AN K+ L+ E+       
Sbjct: 43   ATSPSTLLSLEKK--LALDAPSD---PNTSWPYIAAVSPPLQANFKSTLSAESLLTNEEA 97

Query: 704  XXXXXXXXXXXXXXXXXKGAQDAVMLVCQDNLKNSNNVGRCTLS--EARTSPFESVHLAQ 877
                             K A+DA +LV +     +      +    +     F+ +   +
Sbjct: 98   VIVAAASEALALAKAAAKVAKDAALLVKKKPPAEAEYKSHVSSKSDDLLLKWFKQMEEVE 157

Query: 878  PGEIG-SVGAELKVSEMKWXXXXXXXXXXXXXXGVEPSPEELEVLQSQLSNAIAVKSNRQ 1054
             G    S+GA  ++ E                  +EPS EELE LQ QLS++IAV+S RQ
Sbjct: 158  DGVAEESMGAGAEIME------GVDVSPSEEESDLEPSHEELERLQEQLSDSIAVRSRRQ 211

Query: 1055 TEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVQEVDYSDPLRYLRGTTSGSRLLTASE 1234
            TE                               +QEVDYSDPLRYLR TTS SRLLT +E
Sbjct: 212  TERKAKRVRATEKATTNFTSFKPGSSSRRKRVSMQEVDYSDPLRYLRTTTSASRLLTPTE 271

Query: 1235 EQELSGGIQDXXXXXXXXXXXXXXCGGQPTFSQWAAAAGVDQKTLRKRLNYGILCKDKMI 1414
            E +LS GIQD               G QPTF+QWAA AGVDQKTLRKRLNYGI CKDKMI
Sbjct: 272  EIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYGIFCKDKMI 331

Query: 1415 KSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVR 1594
            KSN+RLVISIAKNYQG GMNLQDLVQEGCRGLV+GAEKFD +KGFKFSTYAHWWIKQAVR
Sbjct: 332  KSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHWWIKQAVR 391

Query: 1595 KSLSDQSRTIRLPF 1636
            KSLSDQSRTIRLPF
Sbjct: 392  KSLSDQSRTIRLPF 405