BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00008627
         (2532 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...   227   e-112
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...   221   4e-92
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   165   2e-62
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...   159   3e-59
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...   222   5e-55
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...   131   2e-54
gb|EOY02234.1| Uncharacterized protein TCM_011921 [Theobroma cacao]   143   2e-47
gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]   147   2e-47
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...   135   4e-47
gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]   150   1e-46
gb|EOY25451.1| Uncharacterized protein TCM_016759 [Theobroma cacao]   139   3e-46
gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]   135   4e-45
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...   189   7e-45
ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein A...   168   2e-44
ref|XP_004234855.1| PREDICTED: putative ribonuclease H protein A...   166   2e-43
ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A...   153   4e-43
gb|EOY34748.1| Uncharacterized protein TCM_042328 [Theobroma cacao]   129   1e-42
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A...   146   1e-42
ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262...   145   9e-42
gb|EOY06959.1| Uncharacterized protein TCM_021521 [Theobroma cacao]   147   3e-41

>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score =  227 bits (579), Expect(2) = e-112
 Identities = 119/318 (37%), Positives = 180/318 (56%), Gaps = 3/318 (0%)
 Frame = +1

Query: 10   ISIIVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRA 189
            I+I +    GI +  F  TYLGCP+++ RRK  ++  ++  I  R+ +W  + LTFGG+ 
Sbjct: 195  IAIRMRRLTGIRQGNFPLTYLGCPVFYGRRKSSYYVEMVQKIAKRILTWHNRFLTFGGKW 254

Query: 190  ILIKHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKME 369
            ILI +VLQSMP+Y+L A+ PP+ V+ Q+H++FA+FFW N    K +HW    +  + K E
Sbjct: 255  ILINNVLQSMPVYMLSALKPPKKVLDQIHQIFAKFFWGNLGGIKGKHWVAWGDLCYPKTE 314

Query: 370  GGWVL-GLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG-SQTWKIL 543
            GG     L+ M   L++  +           V ++                G SQ W+ +
Sbjct: 315  GGLGFRSLHNMNKALFAKLWWNFRVSTTSLWVKYMWNKYCKKLHPVVATSLGASQVWRKM 374

Query: 544  LPARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTT-EGYDETIRNISDIVVGGQWDMG 720
            +  R+ V H IWWQ+  GNS FWFDNWT  GALYYT  +   E    +   +    WD  
Sbjct: 375  ISIREEVEHDIWWQIKAGNSSFWFDNWTRQGALYYTEGDCAQEEELEVQYFITNDGWDET 434

Query: 721  KMTAI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYK 900
            K+  +  E++VEH I  ++P +SE+G+D+  W  ++ G FTVKS +  IR R ++ E  +
Sbjct: 435  KLKDLLSEEMVEHIILNIRPKTSEEGIDKAWWCGNLTGLFTVKSAYHRIRGRKEEEEWRR 494

Query: 901  NTWIEGLPFKISFFLWKI 954
              WI+G+P KISFFLW++
Sbjct: 495  YMWIKGMPIKISFFLWRV 512



 Score =  209 bits (532), Expect(2) = e-112
 Identities = 107/289 (37%), Positives = 166/289 (57%)
 Frame = +2

Query: 956  RITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGLLL 1135
            +I   D LKRM+  + SKC+CC     ET  +L  T+  A K W  F+S+ G+ + GL L
Sbjct: 516  KIATYDNLKRMKIPVVSKCYCCKEGEMETMTHLLLTAPIAQKLWKQFASYAGIIINGLNL 575

Query: 1136 QQRIVKWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKRSIGRIIYQIFAIIQRL 1315
            QQ I KWW      KL QI +AVLA I+WE  KR N+ ++GK+ +   + YQ   I+ +L
Sbjct: 576  QQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTYNNMYYQCQLILYQL 635

Query: 1316 VMTRNPSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDRRS 1495
            V  + P IK + + W  ++ ML++    L    V    P   W+ CNT  AS+GN    S
Sbjct: 636  VTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMSS 695

Query: 1496 CGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQMIQRI 1675
             G+C+R+ +G+L+YA+A NIG  TN +AE   + + +++   N L +V +  DS  +Q +
Sbjct: 696  YGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLRKVRLETDSLALQNM 755

Query: 1676 LA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALANQVLD 1822
            +   WK  W +V +++EI +I+  ++V   H+ RE NQ AD +AN  ++
Sbjct: 756  ITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYREVNQLADFIANTTIN 804


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score =  221 bits (563), Expect(2) = 4e-92
 Identities = 115/322 (35%), Positives = 179/322 (55%), Gaps = 4/322 (1%)
 Frame = +1

Query: 1    PGDISIIVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFG 180
            P  +  +V+   GI +  F FTYLGCPI++ R+ K  F  +L  + NR+ +W+ KL++FG
Sbjct: 598  PNRVCNLVKRITGIRQGSFPFTYLGCPIFYGRKNKGHFENLLKKVSNRMNTWQNKLMSFG 657

Query: 181  GRAILIKHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFL 360
             R ILI HVLQS+P+YLL A+NPP+ +I Q+HK+FA FFWSN+   +++HW       + 
Sbjct: 658  ERYILIAHVLQSIPVYLLAAMNPPKSIIDQLHKLFAIFFWSNSSGARNKHWVAWDKMCYP 717

Query: 361  KMEGG-WVLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG-SQTW 534
            K+EGG     L+ +    ++  +             F+                G S  W
Sbjct: 718  KVEGGLGFRSLHDVSKAFFAKLWWNFRTDTSSLWASFMWNKYCKKMHPTVARGQGASHVW 777

Query: 535  KILLPARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTE--GYDETIRNISDIVVGGQ 708
            + ++  R+ V H+IWWQ+  GNS FWFDNWT  GAL+Y  E    +E I  +      G 
Sbjct: 778  RKMITVREEVEHNIWWQIKAGNSSFWFDNWTKQGALWYVEENNAVEEKI-EVKYFTHQGA 836

Query: 709  WDMGKMTAI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQM 888
            WD  K+     E++ ++ + ++KPP  E   D   W+   +G FTVKS W+ +R + ++ 
Sbjct: 837  WDREKLLNKISEEMTDYIMESIKPPLEEYINDVAWWMGSTQGIFTVKSAWELMRHKQERR 896

Query: 889  EAYKNTWIEGLPFKISFFLWKI 954
              Y+  W + +PFK++FFLW++
Sbjct: 897  TDYQLIWTKDVPFKMNFFLWRL 918



 Score =  147 bits (370), Expect(2) = 4e-92
 Identities = 84/257 (32%), Positives = 127/257 (49%)
 Frame = +2

Query: 950  KFRITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGL 1129
            K RI  DD LKRM+  + S+CWCCS   EET  ++F T+  AN+ W  FS+F G+ +E +
Sbjct: 920  KRRIATDDNLKRMKIQIVSRCWCCSETEEETMTHIFLTAPIANRLWRQFSNFAGIQIESM 979

Query: 1130 LLQQRIVKWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKRSIGRIIYQIFAIIQ 1309
             LQQ I+ WW      KLK + +A+   I+W   KR N  K+    +   ++ Q+     
Sbjct: 980  HLQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFKHRGTTTYSEVVMQVQE--- 1036

Query: 1310 RLVMTRNPSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDR 1489
                                                  E P  N + CNT  A+RGN   
Sbjct: 1037 --------------------------------------EKPGRNKVKCNTDGAARGNSGA 1058

Query: 1490 RSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQMIQ 1669
             S  F +R+ +G+LIYA+A+ IG+ TN +AE  A+LE V Y +   L + +I  DS +++
Sbjct: 1059 SSTSFVVRDEEGDLIYARAKGIGIATNMEAEALALLEAVWYCQEKDLKEPIIETDSLVLK 1118

Query: 1670 RILA*GWKPSWTIVTRM 1720
            +++   WK  W +V R+
Sbjct: 1119 KMVDNQWKIPWELVERI 1135


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  165 bits (418), Expect(2) = 2e-62
 Identities = 101/315 (32%), Positives = 153/315 (48%), Gaps = 9/315 (2%)
 Frame = +1

Query: 37   GIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIKHVLQS 216
            G  +++   TYLGCP++  R +  +F+ ++  +++R+  W+ K L+FGG+A+L K+VLQ+
Sbjct: 131  GFKQKQGPITYLGCPLFVGRPRNVYFSYLINKVVSRITGWQTKQLSFGGKAVLSKYVLQA 190

Query: 217  MPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGWVLGLYM 396
            +PI+LL AV PP  +I+Q+  + A FFW      K  HW    N  +   EGG  +G+  
Sbjct: 191  LPIHLLSAVTPPNTIIKQIQMLIADFFWGWQNNSKKYHWSSWKNLSYPYEEGG--VGMRN 248

Query: 397  MFP*LYSVCYSGTLGQ-------NHLYGVPFLAXXXXXXXXXXXXXXYG-SQTWKILLPA 552
                L  VC S    Q         L+G    A               G S TWK +L  
Sbjct: 249  ----LNDVCKSFQFKQWWTFRTKQTLWGDFLRAKYCQRSNPVSKKWDTGQSLTWKHMLAI 304

Query: 553  RDLVGHHIWWQVGMGNSQFWFDNWTGIGAL-YYTTEGYDETIRNISDIVVGGQWDMGKMT 729
            R  V  HI WQ+  GN  FW+DNW G G L  +T          ++D    G W+  K+ 
Sbjct: 305  RQQVEQHIQWQLQAGNCSFWWDNWMGTGPLAQHTCNNIRLNNSKVADFWENGVWNYRKLV 364

Query: 730  AI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTW 909
               P   + + I  +  P  +   D+P W L  +G+F+  S W+ IR++  +       W
Sbjct: 365  EQAPASQLAN-IMAIAIPQQQYQQDQPVWKLHSQGKFSCHSAWEEIRNKKAKNRFLSFLW 423

Query: 910  IEGLPFKISFFLWKI 954
               +PFK SF LW+I
Sbjct: 424  HNFIPFKTSFLLWRI 438



 Score =  103 bits (257), Expect(2) = 2e-62
 Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 4/272 (1%)
 Frame = +2

Query: 1004 SKCWCCSNPLE-ETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWWTALVIKK 1180
            S C+CC +    ++  ++F T   A + W  F++  GL  +   LQ R+ +WWTA     
Sbjct: 457  SPCYCCVDRAGMDSINHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNA 516

Query: 1181 LKQIF-QAVLAFIIWEFSKRINAIKYG-KKRSIGRIIYQIFAIIQRLVMTRNPSIKNIPH 1354
              Q+  QA   FI W   K   A KYG K  +I R+ Y ++    +++    P I+  P 
Sbjct: 517  GHQLLLQATPIFICWNLWKNRCACKYGGKATNISRVKYAVYKDNFKMMKNAFPHIQ-WPA 575

Query: 1355 RWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDRRSCGFCLRNSDGNLI 1534
             W  +I   +       V +V+   PP  W+  NT  ++  N      G  +RN +G L+
Sbjct: 576  HWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIGAGGIIRNKEGKLV 635

Query: 1535 YAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQMIQRILA*GWKPSWTIVT 1714
             A A ++G  +N  AE  A L  + +        +++  DSQ+I + ++      W++  
Sbjct: 636  MAFATSLGEGSNNKAETEAALIGLVHALELGYRNIIMELDSQLIVQWISKKSVHHWSVSN 695

Query: 1715 RMDEIQDII-NNMEVMFIHIMREENQ*ADALA 1807
            +++ +Q +I         HI RE N  ADAL+
Sbjct: 696  QIERLQYLIMQTQNFKCQHIFREANWVADALS 727


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  159 bits (401), Expect(2) = 3e-59
 Identities = 99/315 (31%), Positives = 150/315 (47%), Gaps = 9/315 (2%)
 Frame = +1

Query: 37   GIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIKHVLQS 216
            G  +++   TYLGCP++  R +  +F+ ++  +++R+  W+ K L+FGG+A+L K+VLQ+
Sbjct: 131  GFKQKQGPITYLGCPLFVGRPRNVYFSDLINKVVSRITGWQTKQLSFGGKAVLSKYVLQA 190

Query: 217  MPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGWVLGLYM 396
            +PI+LL  V PP  +I+Q+    A FFW      K  HW    N  +   EGG  +G+  
Sbjct: 191  LPIHLLSVVTPPNTIIKQIQMFIADFFWGWQNNSKKYHWSSWKNLSYPYEEGG--VGMRN 248

Query: 397  MFP*LYSVCYSGTLGQ-------NHLYGVPFLAXXXXXXXXXXXXXXYG-SQTWKILLPA 552
                L  VC S    Q         L+G    A               G S TWK +L  
Sbjct: 249  ----LNDVCKSFQFKQWWTFQTKQTLWGDFLRAKYCQRSNPVSKKWDTGQSLTWKHMLAI 304

Query: 553  RDLVGHHIWWQVGMGNSQFWFDNWTGIGAL-YYTTEGYDETIRNISDIVVGGQWDMGKMT 729
            R  V  HI WQ+  GN  FW+DN  G G L  +T          ++D    G W+  K+ 
Sbjct: 305  RQQVEQHIQWQLQAGNCSFWWDNCMGTGPLAQHTCSNIRLNNSKVADFWENGVWNCRKLV 364

Query: 730  AI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTW 909
               P   + + I  +  P  +   D+P W L  +G+F+  S W+ IR++  +       W
Sbjct: 365  EQAPASQLAN-IMAIAIPQQQHQQDQPVWKLHSQGKFSCHSAWEEIRNKKAKNRFLSFLW 423

Query: 910  IEGLPFKISFFLWKI 954
               +PFK SF LW+I
Sbjct: 424  HNFIPFKTSFLLWRI 438



 Score = 99.8 bits (247), Expect(2) = 3e-59
 Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 4/272 (1%)
 Frame = +2

Query: 1004 SKCWCCSNPLE-ETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWWTALVIKK 1180
            S C+CC +    ++  ++F T   A + W  F++  GL  +   LQ R+ +WWTA     
Sbjct: 457  SPCYCCVDRAGMDSINHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNA 516

Query: 1181 LKQIF-QAVLAFIIWEFSKRINAIKYG-KKRSIGRIIYQIFAIIQRLVMTRNPSIKNIPH 1354
              Q+  QA   FI W   K   A KYG K  +I R+ Y ++    +++    P I+  P 
Sbjct: 517  GHQLLLQATPIFICWNLWKNRCACKYGGKATNISRVKYVVYKDNFKMMKNAFPHIQ-WPA 575

Query: 1355 RWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDRRSCGFCLRNSDGNLI 1534
             W  +I   +       V +V+   PP  W+  NT  ++  N  +   G  +RN +G L+
Sbjct: 576  HWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKIGAGGIIRNKEGKLV 635

Query: 1535 YAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQMIQRILA*GWKPSWTIVT 1714
             A A ++G  T   A+  A L  + +        +++  DSQ+I + ++      W++  
Sbjct: 636  MAFATSLGEGTKNKAKTEAALIGLVHALELGYRNIIMELDSQLIVQWISKKSVHHWSVSN 695

Query: 1715 RMDEIQDII-NNMEVMFIHIMREENQ*ADALA 1807
            +++ +Q +I         HI +E N  ADAL+
Sbjct: 696  QIERLQYLIMQTQNFKCQHIFKEANWVADALS 727


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score =  222 bits (566), Expect = 5e-55
 Identities = 111/309 (35%), Positives = 174/309 (56%), Gaps = 3/309 (0%)
 Frame = +1

Query: 37   GIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIKHVLQS 216
            GI +  F FTYLGCPI++ R+ +  F +++  +M R+ SW+ +LL+FGGR +LI +VLQS
Sbjct: 234  GIKQGSFPFTYLGCPIFYGRKNRAHFESLIKKVMKRISSWQNRLLSFGGRYVLIANVLQS 293

Query: 217  MPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEG--GWVLGL 390
            +PIY++ A+NPP  VI Q+H++FA+FFW+NT   K++HW       + + EG  GW   L
Sbjct: 294  LPIYVVSAMNPPACVITQLHRIFAKFFWANTAGAKNKHWVGWDKMCYPRGEGGMGW-RSL 352

Query: 391  YMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG-SQTWKILLPARDLVG 567
            + +   L++  +       +     F+               YG S  W+ ++  R+ V 
Sbjct: 353  HDISKALFAKLWWNFRTSTNTLWASFMWNKYCKKHHPIIAQGYGSSHVWRRMISIREEVE 412

Query: 568  HHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVGGQWDMGKMTAI*PED 747
            H IWWQ+  GNS FWFDNWT  GALY+  E   E    + +   G  WD  K+      +
Sbjct: 413  HEIWWQIKAGNSSFWFDNWTKQGALYHIEENAKEEEVEVKEFCTGEGWDKEKLLQNLSLE 472

Query: 748  VVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTWIEGLPF 927
            + +H +  + PP++  G D   W+ + +G FTVKS W   R++ +     +  W + LPF
Sbjct: 473  MTDHIMENISPPNTLFGNDVVWWMANAQGIFTVKSAWQITRNKQEVRRDCEVIWNKELPF 532

Query: 928  KISFFLWKI 954
            KI+FF+W++
Sbjct: 533  KINFFMWRV 541



 Score =  216 bits (549), Expect = 5e-53
 Identities = 116/327 (35%), Positives = 186/327 (56%), Gaps = 13/327 (3%)
 Frame = +2

Query: 881  SRWKLIRIRG--LRDCHL----RSPFSYGKF-------RITVDDVLKRMQYNMASKCWCC 1021
            S W++ R +    RDC +      PF    F       RI  DD LK+M+ N+ S+CWCC
Sbjct: 507  SAWQITRNKQEVRRDCEVIWNKELPFKINFFMWRVWKRRIATDDNLKKMRINIVSRCWCC 566

Query: 1022 SNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWWTALVIKKLKQIFQA 1201
                EET  +LF T+    K W YF+ F G+N++G+ LQQ I+ WW      KL+ I++A
Sbjct: 567  DRKKEETMTHLFPTAPITYKLWRYFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKA 626

Query: 1202 VLAFIIWEFSKRINAIKYGKKRSIGRIIYQIFAIIQRLVMTRNPSIKNIPHRWDYMIQML 1381
            + A I+W   KR NA+K+    S  R++  +  +++++V ++ P IKN+   W  +IQ L
Sbjct: 627  IPAIIMWTLWKRRNALKHDSSISWERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRL 686

Query: 1382 KDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDRRSCGFCLRNSDGNLIYAQAENIGV 1561
                 ++ V +V  + P  +++  NT  A RGN    S GFC+R+  G+LIYA+A+ IG+
Sbjct: 687  NQYKRKIHVLRVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGI 746

Query: 1562 NTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQMIQRILA*GWKPSWTIVTRMDEIQDII 1741
             TN +AE  AIL  +R     ++ +V+I  DS  +++I+   W+  W I  +++EI++I+
Sbjct: 747  ATNMEAETVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIM 806

Query: 1742 NNMEVMFIHIMREENQ*ADALANQVLD 1822
              ++    HI RE N  AD+LAN  ++
Sbjct: 807  EKIKAKITHIFREGNSLADSLANIAIE 833


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 668

 Score =  131 bits (329), Expect(2) = 2e-54
 Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 8/305 (2%)
 Frame = +1

Query: 64  TYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIKHVLQSMPIYLLFAV 243
           TYLGCP++  R K  +F+ ++  +++R+  W+ + L++GG+A+L KHVLQ++ I+LL AV
Sbjct: 50  TYLGCPLFVGRPKNVYFSDLINKVVSRITGWQTRQLSYGGKAVLSKHVLQALSIHLLAAV 109

Query: 244 NPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGWVLGLYMMFP*LYSVC 423
            PP  +I Q+ ++ A FFW      K  HW    N  +   EGG  +G+      L+ VC
Sbjct: 110 TPPNSIILQIQRIIADFFWGWHNNRKKYHWSSWKNLSYPYDEGG--IGMRN----LHDVC 163

Query: 424 YSGTLGQ-------NHLYGVPFLAXXXXXXXXXXXXXXYG-SQTWKILLPARDLVGHHIW 579
            S    Q         L+G    A               G S TWK +L  R  +  HI 
Sbjct: 164 RSFQFKQWWIFRTKQTLWGDFLKAKYCQRSNPMSKKWDTGDSLTWKHMLITRQHMEQHIQ 223

Query: 580 WQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVGGQWDMGKMTAI*PEDVVEH 759
           W++  G+S             ++T          ++D    G W+  K+    P + +  
Sbjct: 224 WKLQAGDS-------------HHTNSSSRFNNTKVADFWDNGSWNWRKLIKYAPANQLSS 270

Query: 760 AISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTWIEGLPFKISF 939
            ++T   P  +   D+  W L   G FT  + W+ +R++  + +     W   +PFK SF
Sbjct: 271 IMAT-AIPQQQTQHDQAIWKLSSNGCFTCSTAWEEVRNKKAKHKFNSLLWHNFIPFKSSF 329

Query: 940 FLWKI 954
            LW++
Sbjct: 330 LLWRV 334



 Score =  111 bits (277), Expect(2) = 2e-54
 Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
 Frame = +2

Query: 1004 SKCWCCSNPLE-ETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWWTALVIKK 1180
            S C+CC +    ++ ++ F +   A + W  F++  GL  +   +Q R+ +WWTA +   
Sbjct: 353  SSCFCCVDRTGMDSIEHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNA 412

Query: 1181 LKQIF-QAVLAFIIWEFSKRINAIKYG-KKRSIGRIIYQIFAIIQRLVMTRNPSIKNIPH 1354
              Q+  QA+  FI+W   K   A KYG K  +I R+ Y I+    +++ +  P I N P 
Sbjct: 413  SHQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCI-NWPG 471

Query: 1355 RWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDRRSCGFCLRNSDGNLI 1534
             W  +IQ  +    ++ V       PP  W+  NT  ++  N      G  +R+ +G ++
Sbjct: 472  NWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIV 531

Query: 1535 YAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQMIQRILA*GWKPSWTIVT 1714
             A A  +G  TN  AE  A L  + +        +LI  DSQ++ + ++    P W ++ 
Sbjct: 532  LAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVQWISKKEPPHWNVIN 591

Query: 1715 RMDEIQDII-NNMEVMFIHIMREENQ*ADALA 1807
            +++ IQ +I         HI RE N  ADAL+
Sbjct: 592  QIERIQQLIMQTQNFKCNHIFREANWVADALS 623


>gb|EOY02234.1| Uncharacterized protein TCM_011921 [Theobroma cacao]
          Length = 926

 Score =  143 bits (360), Expect(2) = 2e-47
 Identities = 88/327 (26%), Positives = 141/327 (43%), Gaps = 12/327 (3%)
 Frame = +1

Query: 19   IVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILI 198
            I+    G   +    TYLG P++   +K   F++++  I +R+  W+ K+L+ GGR  L+
Sbjct: 293  IIAHVTGFHHKTLPVTYLGAPLHKGPKKVYLFDSLISKIRDRISGWENKILSPGGRITLL 352

Query: 199  KHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGG- 375
            + VL S+P+YLL  + PP  VI ++ ++F  F W ++ EGK  HW       F   EGG 
Sbjct: 353  RSVLSSLPMYLLQVLKPPAIVIEKIERLFNSFLWGDSNEGKRMHWAAWNKITFPSSEGGL 412

Query: 376  -----------WVLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG 522
                       + L L+  F    S+       +  L  +P                 + 
Sbjct: 413  DIRNLKDVFDAFTLKLWWRFYTCDSLWTHFLKTKYCLGRIPHYV----------QPKLHN 462

Query: 523  SQTWKILLPARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVG 702
            S  WK +   RD+   +  W++G G   FW D W G   L  +   +   +  +     G
Sbjct: 463  SSIWKRITGGRDVTIQNTRWKIGRGELFFWHDCWMGDQPLVISFPSFRNDMSLVHKFYKG 522

Query: 703  GQWDMGKMTAI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQ 882
              WD+ K+    P ++V+  +     P      D   WIL   GEF+ +S W+ IR R  
Sbjct: 523  DSWDVDKLRLFLPVNLVDEILLI---PFDRTQQDVAYWILTSNGEFSTRSAWETIRKRQP 579

Query: 883  QMEAYKNTWIEGLPFKISFFLWKIQDN 963
                    W   +P  ISFF+W+  +N
Sbjct: 580  HNTLGSLIWHRSIPLSISFFIWRALNN 606



 Score = 76.3 bits (186), Expect(2) = 2e-47
 Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 9/294 (3%)
 Frame = +2

Query: 959  ITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQ 1138
            I V+  +K    ++ASKC CC++  EE+  ++   +  A + W++F++F  + +      
Sbjct: 608  IPVELRMKEKGIHLASKCVCCNS--EESLMHVLWGNSVAKQVWAFFANFFQIYIFNPQHV 665

Query: 1139 QRIV-KWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKRSI-GRIIYQIFAIIQR 1312
              I+  W+ +    K   I   +  FI W      N  K+        R++++I  ++++
Sbjct: 666  SHILWAWFYSGDYVKRGHIRTLLPIFICWFLWLERNDAKHRYSGLYTDRVVWRIMKLLRQ 725

Query: 1313 L------VMTRNPSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASR 1474
            L         +     +I   W Y +Q+      Q+    V    P T     N   +SR
Sbjct: 726  LHDGSLLQQWQWKGDTDIAAMWKYNLQLKLRAPPQI----VYWRKPSTGEYKLNVDGSSR 781

Query: 1475 -GNHDRRSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*R 1651
             G H   + G  LR+  G LI+  +ENIG   +  AE+RA+L  +   K   ++Q+ I  
Sbjct: 782  HGQH--AASGGVLRDHTGKLIFGFSENIGNCNSLQAELRALLRGLLLCKERHIEQLWIEM 839

Query: 1652 DSQMIQRILA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALANQ 1813
            D+  + +++    K S  I   ++ I+  +N++     HI+RE NQ AD L+N+
Sbjct: 840  DALAVIQLIPHSQKGSHDIRYLLESIRKCLNSISYRISHILREGNQVADFLSNE 893


>gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]
          Length = 2251

 Score =  147 bits (370), Expect(2) = 2e-47
 Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 3/315 (0%)
 Frame = +1

Query: 19   IVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILI 198
            I+  A G   +    TYLG P+Y   +K   FN ++  I  R+  W+ K+L+ GGR  L+
Sbjct: 1617 IIAQATGFNHQLLPITYLGAPLYKGHKKVILFNDLVAKIEERITGWENKILSPGGRITLL 1676

Query: 199  KHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGW 378
            + VL S+PIYLL  + PP  V+ +++++F  F W  +   K  HW           EGG 
Sbjct: 1677 RSVLASLPIYLLQVLKPPVCVLERVNRLFNSFLWGGSAASKRIHWASWAKIALPVTEGGL 1736

Query: 379  -VLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXX--YGSQTWKILLP 549
             +  L  +F   +S+               F+                 + SQTWK +L 
Sbjct: 1737 DIRSLAEVFE-AFSMKLWWRFRTTDSLWTRFMRMKYCRGQLPMQTQPKLHDSQTWKRMLT 1795

Query: 550  ARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVGGQWDMGKMT 729
            +  +   H+ W+VG GN  FW D W G   L  + + +  ++  + D      W++ K+ 
Sbjct: 1796 SSTITEQHMRWRVGQGNVFFWHDCWMGEAPLISSNQEFTSSMVQVCDFFTNNSWNIEKLK 1855

Query: 730  AI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTW 909
             +  ++VV+      K P      D   W     G+F+ KS W  IR R      +   W
Sbjct: 1856 TVLQQEVVD---EIAKIPIDTMNKDEAYWTPTPNGDFSTKSAWQLIRKRKVVNPVFNFIW 1912

Query: 910  IEGLPFKISFFLWKI 954
             + +P   SFFLW++
Sbjct: 1913 HKTVPLTTSFFLWRL 1927



 Score = 72.0 bits (175), Expect(2) = 2e-47
 Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 11/296 (3%)
 Frame = +2

Query: 959  ITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSS-FTGLNMEGLLL 1135
            I V+  +K     +AS+C CC +  EE+  ++   +  A + W+YF+  F  L +    +
Sbjct: 1932 IPVELKMKSKGLQLASRCRCCKS--EESIMHVMWDNPVAMQVWNYFAKLFQILIINPCTI 1989

Query: 1136 QQRIVKWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKRSIG----RIIYQIFAI 1303
             Q I  W+ +    K   I   V  FI+W      N  K+   R++G    R+++++  +
Sbjct: 1990 NQIIGAWFYSGDYCKPGHIRTLVPLFILWFLWVERNDAKH---RNLGMYPNRVVWRVLKL 2046

Query: 1304 IQRLVMTRN------PSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYE 1465
            IQ+L + +          K I   W  + Q        L+  KV     P+        +
Sbjct: 2047 IQQLSLGQQLLKWQWKGDKQIAQEWGIIFQ-----AESLAPPKVFSWHKPSLGEFKLNVD 2101

Query: 1466 ASRGNHDRRSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI 1645
             S       + G  LR+  G +++  +EN+G   +  AE+ A+   +   +   + ++ I
Sbjct: 2102 GSAKQSHNAAGGGILRDHAGEMVFGFSENLGTQNSLQAELLALYRGLILCRDYNIRRLWI 2161

Query: 1646 *RDSQMIQRILA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALANQ 1813
              D+  + R+L    +    I   M  ++ ++++    F HI RE NQ AD LAN+
Sbjct: 2162 EMDAISVIRLLQGNHRGPHAIRYLMVSLRQLLSHFSFRFSHIFREGNQAADFLANR 2217


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 655

 Score =  135 bits (340), Expect(2) = 4e-47
 Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 18/333 (5%)
 Frame = +1

Query: 7    DISIIVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGR 186
            DI   ++ A G  R+     YLGCP+Y   ++  +++ ++  I+ ++  W  KLL FGG+
Sbjct: 62   DIIEEIKRATGFNRKNSPINYLGCPLYSGGQRIIYYSELVGKIIKKISGWHSKLLNFGGK 121

Query: 187  AILIKHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKM 366
             IL+KHVLQS+PI+ L A++PP+  +  + K+ A FFW    +GK  HW    N  +   
Sbjct: 122  IILVKHVLQSIPIHTLSAISPPKTTLNCIKKLIADFFWGIDKDGKKYHWSSWENLAYPIS 181

Query: 367  EGGWVLGLYMMFP*LYSVCYSGTLGQ-------NHLYGVPFLAXXXXXXXXXXXXXXYG- 522
            EGG  +G+ +    L  VC +    Q         L+     A               G 
Sbjct: 182  EGG--IGVRL----LEDVCTAFQYKQWWDFRTKKSLWSQFLQAKYCQRANPVAKKYDTGD 235

Query: 523  SQTWKILLPARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRN--ISDIV 696
            S  W+ L   R  V   I W +  G   FW+DNW  I  L    E +  ++ N  ++D +
Sbjct: 236  SLIWRYLTRNRLKVESFIKWNINSGTCSFWWDNWLDIENLASQNE-HISSLNNSMVADFL 294

Query: 697  VGGQWDMGKMTAI*PEDVVEHAISTMKPPSSEKGM--------DRPCWILDIRGEFTVKS 852
              G+W+         E ++   ++ +  P   +          D   W+    G F++ S
Sbjct: 295  KDGKWN---------ESLIRQQVTPLLVPKILQKQFNYIAGKDDTAIWMPTETGIFSISS 345

Query: 853  TWDHIRSRGQQMEAYKNTWIEGLPFKISFFLWK 951
             W+ IR +          W + LPFKI+FF+W+
Sbjct: 346  AWECIRKKRIIDNISTIIWNKHLPFKIAFFIWR 378



 Score = 82.4 bits (202), Expect(2) = 4e-47
 Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
 Frame = +2

Query: 950  KFRITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGL 1129
            K ++  ++ L+R+  N+ S C CC    ++   ++      A   W   ++  G+     
Sbjct: 381  KGKLPTNEFLQRIGSNI-SDCSCCYRKGKDDINHILINGNFAKYIWKIHAATLGIIPVNT 439

Query: 1130 LLQQRIVKWWTALVIKKLKQIFQAVLAFII-WEFSKRINAIKYGKKRS-IGRIIYQIFAI 1303
             L+ +++ W    V  ++ ++   +L  +I W   K   A+KYGKKRS + R+ Y IF  
Sbjct: 440  NLRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWKNRCAVKYGKKRSNVHRVKYGIFKE 499

Query: 1304 IQRLVMTRNPSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNH 1483
            + +++    PSI      W+ ++ ++++   Q  +  V    P       NT  ++  N 
Sbjct: 500  VMQIIKLVFPSIP-WQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNS 558

Query: 1484 DRRSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQM 1663
             +   G  LR+  G ++YA +   GV TN  AEI+A L  +++ + +   +V +  DS++
Sbjct: 559  GKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMQWCEQHGYKKVELEVDSEL 618

Query: 1664 IQRILA*GWKPSWTIVTRMDEIQDIINNMEVMFIH 1768
            +   +    K  W     + +IQ I   ME    H
Sbjct: 619  LFNWIKNTTKIPWRYEDLVQQIQQISMKMEQFQCH 653


>gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
          Length = 3503

 Score =  147 bits (370), Expect(2) = 1e-46
 Identities = 89/315 (28%), Positives = 141/315 (44%), Gaps = 3/315 (0%)
 Frame = +1

Query: 19   IVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILI 198
            I+  A G   R    TYLG P++   +K   FN ++  I  R+  W+ K+L+ GGR  L+
Sbjct: 2868 IILQATGFSHRPLPITYLGAPLFKGHKKVILFNDLVAKIEERITGWENKILSPGGRITLL 2927

Query: 199  KHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGW 378
            +  L S+PIYLL  + PP  V+ +++++F  F W  +   K  HW           EGG 
Sbjct: 2928 RSTLSSLPIYLLQVLKPPIIVLERINRLFNNFLWGGSASSKRIHWASWGKIALPIAEGGL 2987

Query: 379  -VLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXX--YGSQTWKILLP 549
             +  L  +F       +      N L+ + F+                 + SQTWK ++ 
Sbjct: 2988 DIRNLEDVFKAFSMKLWWRFRTTNSLW-MQFMRAKYCGGQLPTHVQPKLHDSQTWKRMVT 3046

Query: 550  ARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVGGQWDMGKMT 729
               +   +I W+VG G   FW D W G   L    + +  ++  +SD  +   WD+ K+ 
Sbjct: 3047 ISSITEQNIRWRVGHGKLFFWHDCWMGEEPLVIRNQEFASSMAQVSDFFLNNSWDIEKLK 3106

Query: 730  AI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTW 909
            ++  ++VVE      K P +    DR  W     G+F+ KS W   R R      Y   W
Sbjct: 3107 SVLQQEVVE---EIAKIPINASSNDRAYWTPTPNGDFSTKSAWQLSRERKVVNPTYNYIW 3163

Query: 910  IEGLPFKISFFLWKI 954
             + +P   SFFLW++
Sbjct: 3164 HKSVPLTTSFFLWRL 3178



 Score = 69.7 bits (169), Expect(2) = 1e-46
 Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 11/296 (3%)
 Frame = +2

Query: 959  ITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQ 1138
            + V+  +K   + +AS+C CC +  EE+  ++   +  AN+ WSYF+    +++      
Sbjct: 3183 VPVELKMKSKGFQLASRCRCCKS--EESLMHVMWDNPVANQVWSYFAKVFQIHIINPCTI 3240

Query: 1139 QRIVK-WWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKRSIG----RIIYQIFAI 1303
              I+  W+ +    K   I   V  FI+W      N  K+   R++G    RI+++I  +
Sbjct: 3241 NHIISAWFYSGDYSKPGHIRTLVPLFILWFLWVERNDAKH---RNLGMYPNRIVWKILKL 3297

Query: 1304 IQRLVMTRN------PSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYE 1465
            I +L   +          K I   W  +++ +     +L    +    P       N   
Sbjct: 3298 IHQLFQGKQLQKWQWQGDKQIAQEWGIILKAVAPSPPKL----LFWNKPSIGEFKLNVDG 3353

Query: 1466 ASRGNHDRRSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI 1645
            +S+ N    + G  LR+  G++I+  +EN G   +  AE+ A+   +     + + ++ I
Sbjct: 3354 SSKYNLQTAAGGGLLRDHTGSMIFGFSENFGSQDSLQAELMALHRGLLLCIDHNVTRLWI 3413

Query: 1646 *RDSQMIQRILA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALANQ 1813
              D+++  +++  G + S      +  I   ++ +     HI RE NQ AD L+NQ
Sbjct: 3414 EMDAKVAVQMINEGHQGSSRTRYLLASIHRCLSGISFRISHIFREGNQAADHLSNQ 3469



 Score =  150 bits (378), Expect = 3e-33
 Identities = 90/327 (27%), Positives = 145/327 (44%), Gaps = 12/327 (3%)
 Frame = +1

Query: 19   IVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILI 198
            I+    G   +    TYLG P++  ++K   F++++  I +R+  W+ K+L+ GGR  L+
Sbjct: 1074 IISHTTGFHHKTLPVTYLGAPLHKGQKKVILFDSLISKIRDRISGWENKILSPGGRITLL 1133

Query: 199  KHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGG- 375
            + VL S P+YLL  + PP  VI ++ ++F  F W ++ +GK  HW       F   EGG 
Sbjct: 1134 RSVLSSQPMYLLQVLKPPVTVIEKIERLFNSFLWGDSCDGKKLHWTAWSKITFPVSEGGL 1193

Query: 376  -----------WVLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG 522
                       + L L+  F    S+       +  L  +P L               + 
Sbjct: 1194 DIRNLRDVFEAFSLKLWWRFQTCNSLWTRFLRTKYCLGRIPHLV----------QPKLHD 1243

Query: 523  SQTWKILLPARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVG 702
            SQ WK ++  RD+   +I W++G G   FW D W G   L      +   + ++     G
Sbjct: 1244 SQVWKRMIVGRDVALQNIRWRIGKGELFFWHDCWMGDQPLATLFPSFHNDMSHVHKFYNG 1303

Query: 703  GQWDMGKMTAI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQ 882
             +WD+ K+ +  P  +V+  +     P      D   W L   GEF+  S W+ IR R  
Sbjct: 1304 DEWDIVKLNSYLPTSLVDEILQI---PFDRSQEDVAYWALTSNGEFSFWSAWEIIRQRQT 1360

Query: 883  QMEAYKNTWIEGLPFKISFFLWKIQDN 963
                    W   +P  ISFFLW++ +N
Sbjct: 1361 PNALLSFNWHRSIPLSISFFLWRVLNN 1387


>gb|EOY25451.1| Uncharacterized protein TCM_016759 [Theobroma cacao]
          Length = 879

 Score =  139 bits (349), Expect(2) = 3e-46
 Identities = 87/327 (26%), Positives = 142/327 (43%), Gaps = 12/327 (3%)
 Frame = +1

Query: 19   IVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILI 198
            I+    G   +     YLG P++   +K   F++++  I +R+  W+ K+L+ GGR  L+
Sbjct: 245  IITRTTGFQHKTLPVIYLGAPLHKGPKKVFLFDSLITKIRDRISGWENKILSPGGRITLL 304

Query: 199  KHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGG- 375
            + VL S+P+YLL  + PP  VI ++ ++F  F W ++ EGK  HW       F   EGG 
Sbjct: 305  RSVLSSLPMYLLQVLKPPAIVIEKIERLFNSFLWGDSNEGKRMHWAAWNKITFPCSEGGL 364

Query: 376  -----------WVLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG 522
                       + L L+  F    S+       +  L  +P                 + 
Sbjct: 365  DIRNLNDVFEAFTLKLWWRFQTCDSLWTHFLKTKYCLGRIPHYV----------HPKLHD 414

Query: 523  SQTWKILLPARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVG 702
            S  WK ++  R++   +I W++G G+  FW D W G   L  +       +  + +   G
Sbjct: 415  SLVWKRMIRGREVAFRNIRWKIGKGDLFFWHDCWMGNQPLVMSFPSLRNDMSLVHNFYNG 474

Query: 703  GQWDMGKMTAI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQ 882
              WD+ K+ A  P ++++  +     P +    D   W L   GEF   S W+ IR R  
Sbjct: 475  DTWDVDKLKAYLPMNLIDEILLI---PFNRTQQDVAYWTLTSNGEFATWSAWETIRQRKS 531

Query: 883  QMEAYKNTWIEGLPFKISFFLWKIQDN 963
                    W   +P  ISFFLW+  +N
Sbjct: 532  SNALCSFIWHRSIPLSISFFLWRALNN 558



 Score = 76.3 bits (186), Expect(2) = 3e-46
 Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 8/293 (2%)
 Frame = +2

Query: 959  ITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLN-MEGLLL 1135
            I V+  +K     +ASKC CC++  EE+  ++   +  A + W++F  F  +  +    +
Sbjct: 560  IPVELRMKEKGIQLASKCVCCNS--EESLMHVLWGNSVAKQVWAFFGKFFQIYVLNPQHV 617

Query: 1136 QQRIVKWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKR-SIGRIIYQIFAIIQR 1312
             Q +  W+ +    K   I   +  FI W      N  K+   R +  R++++I  ++++
Sbjct: 618  SQILWAWFFSGDYVKKGHIRSLLPIFICWFLWLERNDAKHRHTRLNPDRVVWRIMKLLRQ 677

Query: 1313 LV------MTRNPSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASR 1474
            L+        +     +I   W +  Q       Q+    +    P T     N   +SR
Sbjct: 678  LLDGSLLHQWQWKGDTDIASMWGHTFQSKHRAPPQI----IYWRKPFTGEYKLNVDGSSR 733

Query: 1475 GNHDRRSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RD 1654
              H   S G  LR+  G LI+  +ENIG+  +  AE+RA+L  +   K   ++ + I  D
Sbjct: 734  NGHLAASGGI-LRDHTGKLIFGFSENIGLCNSLQAELRALLRGLLLCKERHIENLWIEMD 792

Query: 1655 SQMIQRILA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALANQ 1813
            +  + +++    K S  I   ++ I+  ++ +     HI RE NQ AD LAN+
Sbjct: 793  ALAVIQLIQHSQKGSHDIRYLLESIRKCLSCISYRISHIFREGNQAADYLANE 845


>gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
          Length = 2214

 Score =  135 bits (339), Expect(2) = 4e-45
 Identities = 86/327 (26%), Positives = 137/327 (41%), Gaps = 12/327 (3%)
 Frame = +1

Query: 19   IVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILI 198
            I+    G   +    TYLG P++   +K   F++++  I +R+  W+ K+L+ G R  L+
Sbjct: 1581 IIAQVTGFQHKTLPVTYLGAPLHKGPKKVFLFDSLISKIRDRISGWENKILSPGSRITLL 1640

Query: 199  KHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGG- 375
            + VL S+P+YLL  + PP  VI ++ ++F  F W ++ EGK  HW       F   EGG 
Sbjct: 1641 RSVLSSLPMYLLQVLKPPAIVIEKIERLFNSFLWGDSNEGKRMHWAAWNKINFPCSEGGL 1700

Query: 376  -----------WVLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG 522
                       + L L+  F   Y+     TL     Y                    + 
Sbjct: 1701 DIRNLKDVFDAFTLKLWWRF---YTCDSLWTLFLKTKY-------CLGRIPHYVQPKIHS 1750

Query: 523  SQTWKILLPARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVG 702
            S  WK +   RD+   +  W++G G   FW D W G   L  +   +   +  +     G
Sbjct: 1751 SSIWKRITGGRDVTIQNTRWKIGRGELFFWHDCWMGDQPLVISFPSFRNDMSFVHKFYKG 1810

Query: 703  GQWDMGKMTAI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQ 882
              WD+ K+    P +++   +     P      D   W L   GEF+ KS W+ IR +  
Sbjct: 1811 DSWDVDKLRLFLPVNLIYEILLI---PFDRTQQDVAYWTLTSNGEFSTKSAWETIRQQQS 1867

Query: 883  QMEAYKNTWIEGLPFKISFFLWKIQDN 963
                    W   +P  ISFF+W+  +N
Sbjct: 1868 HNTLGSLIWHRSIPLSISFFIWRALNN 1894



 Score = 76.3 bits (186), Expect(2) = 4e-45
 Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 12/297 (4%)
 Frame = +2

Query: 959  ITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQ 1138
            I V+  +K    ++ASKC CC++  EE+  ++   +  A + W++F+ F  + +      
Sbjct: 1896 IPVELRMKGKGIHLASKCVCCNS--EESLMHVLWGNSVAKQVWAFFAKFFQIYVLNPKHV 1953

Query: 1139 QRIV-KWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKR-SIGRIIYQIFAIIQR 1312
              I+  W+ +    K   I   +  FI W      N  KY     +  RI+++I  ++++
Sbjct: 1954 SHILWAWFYSGDYVKRGHIRTLLPIFICWFLWLERNDAKYRHSGLNTDRIVWRIMKLLRQ 2013

Query: 1313 LVMTRNPSI---------KNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYE 1465
            L   ++ S+          +I   W Y  Q+      Q+    V    P T     N   
Sbjct: 2014 L---KDGSLLQQWQWKGDTDIAAMWQYNFQLKLRAPPQI----VYWRKPSTGEYKLNVDG 2066

Query: 1466 ASR-GNHDRRSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVL 1642
            +SR G H   + G  LR+  G LI+  +ENIG   +  AE+RA+L  +   K   ++++ 
Sbjct: 2067 SSRHGQH--AASGGVLRDHTGKLIFGFSENIGTCNSLQAELRALLRGLLLCKERHIEKLW 2124

Query: 1643 I*RDSQMIQRILA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALANQ 1813
            I  D+    ++L    K S  I   ++ I+  +N++     HI RE NQ AD L+N+
Sbjct: 2125 IEMDALAAIQLLPHSQKGSHDIRYLLESIRKCLNSISYRISHIHREGNQVADFLSNE 2181


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score =  189 bits (479), Expect = 7e-45
 Identities = 100/287 (34%), Positives = 160/287 (55%)
 Frame = +2

Query: 950  KFRITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGL 1129
            KF++ VD+V++ M  N+ S+CWCC     ET  +LF T ++A K W  F++  G+++EGL
Sbjct: 3    KFKVPVDEVVQSMGINLVSRCWCCIQSKSETMSHLFLTFYTAAKLWILFANVAGISLEGL 62

Query: 1130 LLQQRIVKWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKRSIGRIIYQIFAIIQ 1309
             L Q ++KWWT+     LK + + V   +IW   KR N +K+G+  S   ++Y++ + + 
Sbjct: 63   QLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSYNNLVYRVNSDLW 122

Query: 1310 RLVMTRNPSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDR 1489
            +L  T  P +++ P +W  ++  L+    +L    V  + PP   L CNT  ASR N + 
Sbjct: 123  KLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTCNTDVASRCNPEI 181

Query: 1490 RSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQMIQ 1669
             S GFCLRNS G+L+Y Q + I   TN + E  AI E + +     + +  +  DSQ++ 
Sbjct: 182  SSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAIREDLAHCVTKGVMKACLETDSQVLI 241

Query: 1670 RILA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALAN 1810
            +IL   W+  W+IV  +++I  +     V   H+ RE N  AD LAN
Sbjct: 242  KILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLAN 288


>ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Solanum lycopersicum]
          Length = 451

 Score =  168 bits (426), Expect(2) = 2e-44
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 9/314 (2%)
 Frame = +1

Query: 37  GIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIKHVLQS 216
           G  +++   TYLGCP++  R +  +F+ ++  +++R+  W+ K L+FGG+A+L KHVLQ+
Sbjct: 72  GFKQKQGPITYLGCPLFVGRPRNTYFSNLINKVISRITGWQTKQLSFGGKAVLSKHVLQA 131

Query: 217 MPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGWVLGLYM 396
           +PI+LL AV PP+ +I+Q+  + A FFW      +  HW    N  +   EGG  +G+  
Sbjct: 132 LPIHLLTAVTPPKTIIKQIQMLIADFFWGWQNNRRKYHWSSWKNLSYPYEEGG--IGMRN 189

Query: 397 MFP*LYSVCYSGTLGQ-------NHLYGVPFLAXXXXXXXXXXXXXXYG-SQTWKILLPA 552
               L+ +C S    Q       + L+G    A               G S  WK +L  
Sbjct: 190 ----LHDICKSFQFKQWWTFRTKHTLWGDFLKAKYCQRSNPVSKKWDTGESIAWKHMLAT 245

Query: 553 RDLVGHHIWWQVGMGNSQFWFDNWTGIGAL-YYTTEGYDETIRNISDIVVGGQWDMGKMT 729
           R     +I WQ+  GN  FW+DNW G G+L  +T          ++D    G W+  K+ 
Sbjct: 246 RQQGEQYIQWQLNSGNCSFWWDNWLGTGSLAQHTNRNIRFNNSKVADFWENGNWNWRKLE 305

Query: 730 AI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTW 909
              P   + + ++T  P   +K  D+  W LD  G+F+  S W+ IRS+  +   +   W
Sbjct: 306 EQAPTTHLTNIMATAIPSQQQK-PDQAVWRLDSHGKFSCHSAWEEIRSKKPKNRFFNLLW 364

Query: 910 IEGLPFKISFFLWK 951
              +PFK SF LW+
Sbjct: 365 HNSIPFKASFLLWR 378



 Score = 40.8 bits (94), Expect(2) = 2e-44
 Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +2

Query: 1004 SKCWCCSNPLE-ETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWW 1159
            S C+CC +    ++ +++F +   A++ WS+F++  GL +E   +Q R+ +WW
Sbjct: 398  SHCFCCIDRAGMDSIEHIFNSGQFASRVWSFFAASAGLEIEQPSIQARLRQWW 450


>ref|XP_004234855.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 440

 Score =  166 bits (420), Expect(2) = 2e-43
 Identities = 99/314 (31%), Positives = 153/314 (48%), Gaps = 9/314 (2%)
 Frame = +1

Query: 37  GIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIKHVLQS 216
           G  +++   TYLGCP++  R +  +F+ ++  +++R+  W+ K L++GG+A+L KHVLQ+
Sbjct: 41  GFKQKQGPITYLGCPLFVGRPRNVYFSDLINKVVSRITGWQTKQLSYGGKAVLSKHVLQA 100

Query: 217 MPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGWVLGLYM 396
           +PI+LL AV PP  +IRQ+  + A FFW    + K  HW    N  +   EGG  +G+  
Sbjct: 101 LPIHLLLAVTPPTTIIRQIQMLIADFFWGWKNDRKKYHWSSWKNLSYPYEEGG--IGMRN 158

Query: 397 MFP*LYSVCYSGTLGQ-------NHLYGVPFLAXXXXXXXXXXXXXXYG-SQTWKILLPA 552
               L  VC S    Q         L+G    A               G S TWK +L  
Sbjct: 159 ----LQDVCKSFQFKQWWVFRTKQTLWGEFLRAKYCQRSNPVCKKWDTGESLTWKHMLDT 214

Query: 553 RDLVGHHIWWQVGMGNSQFWFDNWTGIGAL-YYTTEGYDETIRNISDIVVGGQWDMGKMT 729
           R  V  HI W +  GN  FW+DNW G G L  +TT         +++ +  G+W   K+ 
Sbjct: 215 RQQVEQHIHWNLQAGNCSFWWDNWLGTGPLAQHTTSSNRFNNITVAEFLENGEWKWSKLM 274

Query: 730 AI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTW 909
              P   +   ++T + P  +   D+  W  +  G F+  S W+ IRS+  +       W
Sbjct: 275 KHAPVTQLSSILAT-RIPQHQHRPDQAIWKPNTHGRFSCTSAWEEIRSKKAKNNFNSLIW 333

Query: 910 IEGLPFKISFFLWK 951
            + +PFK SF LW+
Sbjct: 334 HKSIPFKTSFLLWR 347



 Score = 39.3 bits (90), Expect(2) = 2e-43
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +2

Query: 1004 SKCWCCSNPLE-ETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWWTA 1165
            S C+CC +    +T +++F +   A K W +F++  GL  +   L   I +WWTA
Sbjct: 367  SPCFCCFDRAGMDTVEHIFNSGPFAAKVWRFFAASAGLQADHSTLLALIKQWWTA 421


>ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 622

 Score =  153 bits (386), Expect(2) = 4e-43
 Identities = 96/305 (31%), Positives = 150/305 (49%), Gaps = 9/305 (2%)
 Frame = +1

Query: 64  TYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIKHVLQSMPIYLLFAV 243
           TYLGCP++  R +  +F+ ++  +++R+  W+ K L++GG+A+L KHVL+++PI+LL AV
Sbjct: 81  TYLGCPLFVGRPRNVYFSDLINKVVSRITGWQTKQLSYGGKAVLSKHVLEALPIHLLSAV 140

Query: 244 NPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGWVLGLYMMFP*LYSVC 423
            PP+ +IRQ+  + A FFW    + K  H     N  +   EGG  +G+      L  VC
Sbjct: 141 IPPKTIIRQIQMLIADFFWGWKNDRKKYHRSSWKNLSYPYEEGG--IGMRN----LQDVC 194

Query: 424 YS-------GTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG-SQTWKILLPARDLVGHHIW 579
            S           +  L+G    A               G S  WK +L  R  +  HI 
Sbjct: 195 KSFQFKHWWSFRTKQTLWGDFLRAKYCQRANPVNKKWDTGQSLMWKNMLDTRQQMEQHIH 254

Query: 580 WQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNI-SDIVVGGQWDMGKMTAI*PEDVVE 756
           W++  GN  FW+DNW G G L   T   +    +I ++    G+W   K+    P   + 
Sbjct: 255 WKLQAGNYSFWWDNWLGTGPLAQHTASSNRFNNSIVANFWENGEWKWRKLVRHAPITHLS 314

Query: 757 HAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTWIEGLPFKIS 936
             ++T + P  +   D+  W L+I G F  KS WD IR++  +       W + +PFK S
Sbjct: 315 SILAT-RIPQQQHRPDQAIWKLNIHGRFDCKSAWDEIRNKKAKNFFNSALWHKFIPFKTS 373

Query: 937 FFLWK 951
           F LW+
Sbjct: 374 FLLWR 378



 Score = 51.6 bits (122), Expect(2) = 4e-43
 Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 3/199 (1%)
 Frame = +2

Query: 1010 CWCC-SNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWWTALVIKK-L 1183
            C+CC      +T +++F +   A   W++F++  G+  +   L   I +WWTA       
Sbjct: 400  CFCCFDRGGMDTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTAKPNNAGH 459

Query: 1184 KQIFQAVLAFIIWEFSKRINAIKY-GKKRSIGRIIYQIFAIIQRLVMTRNPSIKNIPHRW 1360
            K + QA   FI W   K   A KY GK  +I R+ Y I+    +++    P+        
Sbjct: 460  KLLLQATPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNAFPN-------- 511

Query: 1361 DYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDRRSCGFCLRNSDGNLIYA 1540
                      G+ L+                        N  +   G  +R+ +G +I A
Sbjct: 512  ----------GSALT------------------------NEGKIGAGGIIRDKEGKMIMA 537

Query: 1541 QAENIGVNTNTDAEIRAIL 1597
             +  +G  +N  AEI A L
Sbjct: 538  FSTPLGEGSNNQAEIEAAL 556


>gb|EOY34748.1| Uncharacterized protein TCM_042328 [Theobroma cacao]
          Length = 910

 Score =  129 bits (324), Expect(2) = 1e-42
 Identities = 83/312 (26%), Positives = 139/312 (44%)
 Frame = +1

Query: 19   IVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILI 198
            I+  A G   +    TYLG P+Y   +K   FN ++  I  R+  W+ K+L+ GGR  L+
Sbjct: 313  IIAQATGFNHQLLPITYLGAPLYKGHKKVILFNDLVAKIEERITGWENKILSPGGRITLL 372

Query: 199  KHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGW 378
            + VL S+PIYLL  + PP  ++ +++ + A+ F + +++   R         F  ++  W
Sbjct: 373  RSVLASLPIYLLQVLKPPVCILERVNSL-AEVFEAFSMKLWWR---------FRTIDSLW 422

Query: 379  VLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYGSQTWKILLPARD 558
               + M +            GQ  +   P L               + SQTWK +L +  
Sbjct: 423  TRFMRMKY----------CRGQLPMQTQPKL---------------HDSQTWKRMLTSSA 457

Query: 559  LVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVGGQWDMGKMTAI* 738
                H+ W+VG GN  FW D W G   L  + + +  ++  + D  +   W++ K+  + 
Sbjct: 458  TTEQHMRWRVGQGNLFFWHDCWMGDAPLISSNQEFTSSMVQVCDFFMNNSWNVEKLKTVL 517

Query: 739  PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTWIEG 918
             ++VV+      K P      D   W     G+F+ KS W  IR R      +   W + 
Sbjct: 518  QQEVVD---EIAKIPIDTMSKDEAYWTPTPNGDFSTKSAWQLIRKRKVVNPVFNFIWHKT 574

Query: 919  LPFKISFFLWKI 954
            +P   SFFLW++
Sbjct: 575  VPLTTSFFLWRL 586



 Score = 73.9 bits (180), Expect(2) = 1e-42
 Identities = 70/296 (23%), Positives = 131/296 (44%), Gaps = 11/296 (3%)
 Frame = +2

Query: 959  ITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFSS-FTGLNMEGLLL 1135
            I V+  +K     +AS+C CC +  EE+  ++   +  A + W+YF+  F    +    +
Sbjct: 591  IPVELKMKSKGLQLASRCRCCKS--EESIMHVMWDNPVAMQVWNYFAKLFQICIINPCTI 648

Query: 1136 QQRIVKWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKRSIG----RIIYQIFAI 1303
             Q I  W+ +    K   I   V  FI+W      N  K+   R++G    R+++++  +
Sbjct: 649  NQIIGAWFHSGDYCKPGHIRTLVPLFILWFLWVERNDAKH---RNLGMYPNRVVWRVLKL 705

Query: 1304 IQRLVMTRN------PSIKNIPHRWDYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYE 1465
            IQ+L + +          K I   W  ++Q        L+  KV     PT        +
Sbjct: 706  IQQLSLGQQLLKWQWKGDKQIAQEWGIILQ-----AESLAPPKVFSWHKPTTGEFKLNVD 760

Query: 1466 ASRGNHDRRSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI 1645
             S  +    + G  LR+  G +++  +EN+G+  +  AE+ A+   +   +   + ++ I
Sbjct: 761  GSAKHSHNAAGGGILRDHAGVMVFGFSENLGIQNSLQAELLALYRGLILCRDYNIRRLWI 820

Query: 1646 *RDSQMIQRILA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALANQ 1813
              D+  + R+L    +    I   M  ++ ++++    F HI RE NQ AD LAN+
Sbjct: 821  EMDAISVIRLLQGNHRGPHAIRYLMVSLRQLLSHFSFRFSHIFREGNQAADFLANR 876


>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 927

 Score =  146 bits (369), Expect(2) = 1e-42
 Identities = 87/311 (27%), Positives = 142/311 (45%), Gaps = 1/311 (0%)
 Frame = +1

Query: 22   VEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIK 201
            ++I  G G +    +YLGCP+Y   ++  +F+ ++  ++ R+  W+ K+L+FGG+  L+K
Sbjct: 331  IKIVTGFGIKYSPISYLGCPLYIGGQRISYFSEVVEKVIRRISGWQSKILSFGGKDTLVK 390

Query: 202  HVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGWV 381
            +VLQS+PI+ +  ++PP+  +  + K+ A FFW    EGK  +W       +   EGG  
Sbjct: 391  NVLQSIPIHTIATMSPPKTTLSHIKKVIADFFWGLDNEGKKYYWASWDTLAYPTNEGGIG 450

Query: 382  LGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYGSQTWKILLPARDL 561
               +     L+S        Q                          S  W+ L   R  
Sbjct: 451  WWEFRTKKSLWSQFLKAKYCQR-------------ANPVAKKYDTGDSLVWRYLTRNRLE 497

Query: 562  VGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDE-TIRNISDIVVGGQWDMGKMTAI* 738
            V  HI   V  GN  FW+DNW G GA+    E       R + D +  G+W+   +    
Sbjct: 498  VESHIKLNVSSGNCYFWWDNWLGCGAMANECENISSLNNREVRDYLTDGRWNESLVRQHV 557

Query: 739  PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNTWIEG 918
            P  +V + + T      E   D   WI  + G F++ S W+ IR +  +    K  W + 
Sbjct: 558  PAQLVLNILQT-NINYKEDTADSAIWIPVVSGNFSISSAWEIIRKKHNKDPINKIVWNKQ 616

Query: 919  LPFKISFFLWK 951
            +PFK+SFF+W+
Sbjct: 617  IPFKVSFFIWR 627



 Score = 56.2 bits (134), Expect(2) = 1e-42
 Identities = 58/270 (21%), Positives = 107/270 (39%), Gaps = 4/270 (1%)
 Frame = +2

Query: 1010 CWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWWTALVIKKLKQ 1189
            C+CC    ++   ++  T   A   W Y +S  G+      L+ ++++            
Sbjct: 649  CYCCYKKWKDEISHILVTGNFAKHIWKYHASSVGVIQANTTLRSQLIQC----------- 697

Query: 1190 IFQAVLAFIIWEFSKRINAIKY-GKKRSIGRIIYQIFAIIQRLVMTRNPSIKNIP--HRW 1360
                              A+KY GK+ SI ++ Y I     +++    P   NIP    W
Sbjct: 698  ------------------AVKYGGKQSSIQKVKYGISKETMQVIKLTFP---NIPWQSNW 736

Query: 1361 DYMIQMLKDGGAQLSVSKVI*EFPPTNWLMCNTYEASRGNHDRRSCGFCLRNSDGNLIYA 1540
            + +I +++       V+ V    P  +    NT  ++     +   G  LR+  G LI A
Sbjct: 737  ESLINIVEQCKQLYKVNMVRWIKPKQHVYKLNTNGSALAESGKIGGGGVLRHHQGKLICA 796

Query: 1541 QAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RDSQMIQRILA*GWKPSWTIVTRM 1720
             +  +GV T   AE++A    + + + +    + +  DS++I + +    KP W     +
Sbjct: 797  FSVPLGVGTYNFAELKAATFGIDWCEQHGYKSIELEVDSEIICQWINNTIKPPWRCQHNV 856

Query: 1721 DEIQDIINNMEVMFI-HIMREENQ*ADALA 1807
             ++    +  +     HI RE N  AD LA
Sbjct: 857  QQLLQTTSKFQYFHCKHIYREANNTADLLA 886


>ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum
            lycopersicum]
          Length = 764

 Score =  145 bits (367), Expect(2) = 9e-42
 Identities = 93/314 (29%), Positives = 147/314 (46%), Gaps = 9/314 (2%)
 Frame = +1

Query: 37   GIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILIKHVLQS 216
            G   +     YLGCP+Y   ++  +F  ++  ++ ++  W+ K+L FGG+  LIKHVLQS
Sbjct: 299  GFSMKNSPINYLGCPLYIGGQRIIYFFEVVDKVIKKISGWQSKILNFGGKITLIKHVLQS 358

Query: 217  MPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGGWVLGLYM 396
            +PI+ L A++PP+  I  + K+ A FFW    EGK  HW       +   EGG  + L  
Sbjct: 359  IPIHTLAAISPPKTTINHIKKLMADFFWGIDKEGKKYHWASWDTMAYPTNEGGIGVRLLD 418

Query: 397  MFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXY--GSQTWKILLPARDLVGH 570
                 +   +       H     FL                   S  W+ L   R  V  
Sbjct: 419  DICKAFQYKHWWDFRTKHSLWSNFLMSKYCQRAHPVAKKYNTGDSLMWRYLTRNRIEVEV 478

Query: 571  HIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVV-----GGQWDMGKMTAI 735
            HI W +  G S  W+DNWTG GA+      Y + + +++++V+      G+W+   +   
Sbjct: 479  HIRWHIQSGTSSLWWDNWTGNGAI----ANYCDHVSSLNNMVLAECLTNGKWNERFIRQH 534

Query: 736  *PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQQMEAYKNT--W 909
             P  ++ H + T      E   D   W+ +  G+F++ S WD IR +  +   Y NT  W
Sbjct: 535  VPAILIPHILQTC-INYKEGAEDTAIWLPEESGKFSIASAWDIIRRK--KSTDYINTIIW 591

Query: 910  IEGLPFKISFFLWK 951
             + +PFKISFF+W+
Sbjct: 592  HKYIPFKISFFIWR 605



 Score = 54.3 bits (129), Expect(2) = 9e-42
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
 Frame = +2

Query: 1001 ASKCWCCSNPLEETTQYLFATSFSANKTWSYFSSFTGLNMEGLLLQQRIVKWWTALVIKK 1180
            A +C+CC    ++   ++ +T   AN  W Y++   G+      ++   + W       +
Sbjct: 624  AEECYCCYKQGKDDINHILSTGHFANYIWKYYARKLGVIHLQTNIRSLFILWRNQHATNQ 683

Query: 1181 -LKQIFQAVLAFIIWEFSKRINAIKYGKKR-SIGRIIYQIFAIIQRLVMTRNPSI 1339
             LK +FQ +   I W   K   A+KYG KR SI R+ Y I+  + +++    P I
Sbjct: 684  VLKTLFQILPNIICWNLWKNRCAVKYGNKRSSINRVQYGIYKDVMQIIKVMFPII 738


>gb|EOY06959.1| Uncharacterized protein TCM_021521 [Theobroma cacao]
          Length = 1951

 Score =  147 bits (370), Expect(2) = 3e-41
 Identities = 88/327 (26%), Positives = 145/327 (44%), Gaps = 12/327 (3%)
 Frame = +1

Query: 19   IVEIAAGIGRRKFLFTYLGCPIYHSRRKKEFFNTILMNIMNRL*SWKGKLLTFGGRAILI 198
            I+    G   +    TYLG P++   +K   F++++  I +R+  W+ K+L+ GGR  L+
Sbjct: 1317 IISHTTGFHHKTLPVTYLGAPLHKGPKKVFLFDSLISKIRDRISGWENKILSPGGRITLL 1376

Query: 199  KHVLQSMPIYLLFAVNPPQDVIRQMHKMFAQFFWSNTIEGKSRHW*HGINCIFLKMEGG- 375
            + VL S P+YLL  + PP  VI ++ ++F  F W ++ +GK  HW       F   EGG 
Sbjct: 1377 RSVLSSQPMYLLQVLKPPVTVIEKIERIFNSFLWGDSNDGKKLHWTVWSKITFPVSEGGL 1436

Query: 376  -----------WVLGLYMMFP*LYSVCYSGTLGQNHLYGVPFLAXXXXXXXXXXXXXXYG 522
                       + L L+  F    S+       +  L  +P                 + 
Sbjct: 1437 DIRNLRDVFEAFSLKLWWRFQTCNSLWTKFLRTKYCLGRIPHFVQPKL----------HD 1486

Query: 523  SQTWKILLPARDLVGHHIWWQVGMGNSQFWFDNWTGIGALYYTTEGYDETIRNISDIVVG 702
            SQ WK ++  RD+   +I W++G G   FW D W G   L      +   + ++     G
Sbjct: 1487 SQVWKRMIVGRDVALQNIRWRIGKGELFFWHDCWMGDQPLATLCPSFHNDMSHVHKFYNG 1546

Query: 703  GQWDMGKMTAI*PEDVVEHAISTMKPPSSEKGMDRPCWILDIRGEFTVKSTWDHIRSRGQ 882
              WD+ K+++  P  +V+  +     P      D   W L   G+F++ S W+ IR R  
Sbjct: 1547 DVWDIEKLSSCLPTSLVDEILQI---PFDRSQEDVAYWALTSNGDFSLWSAWEAIRQRQT 1603

Query: 883  QMEAYKNTWIEGLPFKISFFLWKIQDN 963
                +   W   +P  ISFFLW++ +N
Sbjct: 1604 PNALFSLIWHRSIPLSISFFLWRVLNN 1630



 Score = 51.2 bits (121), Expect(2) = 3e-41
 Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 8/302 (2%)
 Frame = +2

Query: 959  ITVDDVLKRMQYNMASKCWCCSNPLEETTQYLFATSFSANKTWSYFS-SFTGLNMEGLLL 1135
            I V+  +K    ++ASKC CC +  EE+  ++   +  A + W +F+ SF     +   +
Sbjct: 1632 IPVELRMKDKGIHLASKCVCCRS--EESLIHVLWENPVATQVWFFFAKSFQIYVSKPNHI 1689

Query: 1136 QQRIVKWWTALVIKKLKQIFQAVLAFIIWEFSKRINAIKYGKKRSIG----RIIYQIFAI 1303
             Q I  W+ +    +   I   +  FI W      N  K+   R +G    R+I++I  +
Sbjct: 1690 SQIIWAWFFSGDYTRNGHIRILIPLFICWFLWLERNDAKH---RHMGMYPNRVIWRIMKL 1746

Query: 1304 IQRLVMTRNPSIKNIPHRWDYMIQML---KDGGAQLSVSKVI*EFPPTNWLMCNTYEASR 1474
            + +L       +K    + D  I  +   K      +  ++I    P         + S 
Sbjct: 1747 LNQLY--AGSLLKQWQWKGDTDIATMWGFKFPPKYCTSPQIIYWIKPFIGEYKLNVDGSS 1804

Query: 1475 GNHDRRSCGFCLRNSDGNLIYAQAENIGVNTNTDAEIRAILEVVRYFKANQLDQVLI*RD 1654
             ++   + G  LR+  G L +A +EN+G   +  AE+ A+L  +   K   +  + I  D
Sbjct: 1805 KSNLNAAGGGVLRDHTGKLAFAFSENLGPLPSLQAELHALLRGLLLCKERNITNLWIEMD 1864

Query: 1655 SQMIQRILA*GWKPSWTIVTRMDEIQDIINNMEVMFIHIMREENQ*ADALANQVLDRFFF 1834
            + +  +++    K S  I   ++ I+  + +      HI RE NQ AD L+N+       
Sbjct: 1865 ALVAVQMVQQSQKGSHDIRYLLESIRLCLRSFSYRISHIYREGNQAADFLSNKGQTHQSL 1924

Query: 1835 CI 1840
            C+
Sbjct: 1925 CV 1926