BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00008512
         (2177 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-...   788   0.0  
ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-...   783   0.0  
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      765   0.0  
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      679   0.0  
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   671   0.0  
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   606   e-170
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   606   e-170
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]             598   e-168
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   597   e-168
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   596   e-167
gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus pe...   590   e-166
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   590   e-166
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              589   e-165
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   588   e-165
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-...   580   e-162
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   573   e-161
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   573   e-161
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   573   e-160
gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus...   570   e-160
ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-...   563   e-158

>ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Solanum
            tuberosum] gi|565361192|ref|XP_006347342.1| PREDICTED:
            RNA polymerase sigma factor sigA-like isoform X2 [Solanum
            tuberosum]
          Length = 505

 Score =  788 bits (2035), Expect = 0.0
 Identities = 408/498 (81%), Positives = 433/498 (86%), Gaps = 11/498 (2%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCHPTRNVINAKKSSNYSPGYVSNRKRQSV 571
            GLY GNRI                SGDHAL C+PT NVINAKKSSNYS GYVSNRK+QSV
Sbjct: 8    GLYAGNRILSSSFYYSDLTEKLACSGDHALICNPTWNVINAKKSSNYSTGYVSNRKKQSV 67

Query: 572  KAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNLSAEKIL 751
            KAVKEHV++ASNHSD+EP V+MFK+LQN+S SEEDSVEV    QKSMLEKQWNLSAEK L
Sbjct: 68   KAVKEHVNIASNHSDVEPMVEMFKKLQNESFSEEDSVEVLLLLQKSMLEKQWNLSAEKTL 127

Query: 752  TALPPNENNSKKKMEITCSGTSARRRRMDTR----IPKISDA-------LRSVVGPELQQ 898
             A PPNE N KKKM+ITCSGTSARRRRMDTR    IPK S A       LRSVVGPELQQ
Sbjct: 128  AAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAANSASKRLRSVVGPELQQ 187

Query: 899  NRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAVSLKI 1078
            NRL+GY+ GVV+QELLTH EVVQLSKKIK+GLYLEEQK+ LKERLGCEPSDDQLAVSLK+
Sbjct: 188  NRLRGYMKGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCEPSDDQLAVSLKM 247

Query: 1079 SRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXXEKFD 1258
            S ADLRSTL+ECSLAREKLAMSNVRLVMSIAQRYDSMGTEMAD             EKFD
Sbjct: 248  SLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQGGLIGLLRGIEKFD 307

Query: 1259 HSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGITPSIE 1438
            HSRGFKISTYVYWWIRQGVSRALV+NSRTLRLPIHLHERLSLIRNAK+KLK+NGITPSIE
Sbjct: 308  HSRGFKISTYVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKLKDNGITPSIE 367

Query: 1439 KIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPWHGVD 1618
            KIAECLNMSQKKVRNATEASSKVFSLDREA+PSLNGLPG TLHSYIADNR+ENNPWHGVD
Sbjct: 368  KIAECLNMSQKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNRLENNPWHGVD 427

Query: 1619 EWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGLVALE 1798
             WALKDEVN+LISSTLRERE DI+RLYYGL NECLTWEDISRRIGLSRERVRQVGLVALE
Sbjct: 428  GWALKDEVNNLISSTLRERERDIVRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALE 487

Query: 1799 KLKHAARKRRLDAMLVKH 1852
            KLKHAARK++LDAMLVKH
Sbjct: 488  KLKHAARKKQLDAMLVKH 505


>ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
            lycopersicum]
          Length = 505

 Score =  783 bits (2023), Expect = 0.0
 Identities = 405/498 (81%), Positives = 431/498 (86%), Gaps = 11/498 (2%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCHPTRNVINAKKSSNYSPGYVSNRKRQSV 571
            G Y GNRI                SGDHAL C+PTRNVINAKKSSNYS GYVSNRK+QSV
Sbjct: 8    GPYAGNRILSSSFYYSDLTEKLACSGDHALICNPTRNVINAKKSSNYSAGYVSNRKKQSV 67

Query: 572  KAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNLSAEKIL 751
            KAVKEHV++ASNHSD+EP V+M K+LQN+SCS+ED VEV    QKSMLEKQWNLSAEK L
Sbjct: 68   KAVKEHVNIASNHSDVEPMVEMLKKLQNESCSKEDPVEVLLLLQKSMLEKQWNLSAEKTL 127

Query: 752  TALPPNENNSKKKMEITCSGTSARRRRMDTR----IPKIS-------DALRSVVGPELQQ 898
             A PPNE N KKKM+ITCSGTSARRRRMDTR    IPK S         LRSVVGPELQQ
Sbjct: 128  EAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKASAEANSASKRLRSVVGPELQQ 187

Query: 899  NRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAVSLKI 1078
            NRL+GY+NGVV+QELLTH EVVQLSKKIK+GLYLEEQK+ LKERLGCEPSDDQLAVSLK+
Sbjct: 188  NRLRGYMNGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCEPSDDQLAVSLKM 247

Query: 1079 SRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXXEKFD 1258
            S ADLRSTL+ECSLAREKLAMSNVRLVMSIAQRYDSMGTEMAD             EKFD
Sbjct: 248  SLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQGGLIGLLRGIEKFD 307

Query: 1259 HSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGITPSIE 1438
            HSRGFKISTYVYWWIRQGVSRALV+NSRTLRLPIHLHERLSLIRNAK+KLK++GITPSIE
Sbjct: 308  HSRGFKISTYVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKLKDSGITPSIE 367

Query: 1439 KIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPWHGVD 1618
            KIAECLNMSQKKVRNATEASSKVFSLDREA+PSLNGLPG TLHSYIADNR+ENNPWHGVD
Sbjct: 368  KIAECLNMSQKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNRLENNPWHGVD 427

Query: 1619 EWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGLVALE 1798
             WALKDEVN+LISS LRERE DIIRLYYGL NECLTWEDISRRIGLSRERVRQVGLVALE
Sbjct: 428  GWALKDEVNNLISSILRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALE 487

Query: 1799 KLKHAARKRRLDAMLVKH 1852
            KLKHAARK++LDAMLVKH
Sbjct: 488  KLKHAARKKQLDAMLVKH 505


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  765 bits (1975), Expect = 0.0
 Identities = 409/502 (81%), Positives = 425/502 (84%), Gaps = 15/502 (2%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCH---PTRNVINAKKSSNYSPGYVSNRKR 562
            GL  GNRI                S DHAL CH     +NVINAK SSNYSP YVSNRK+
Sbjct: 6    GLSAGNRILSSSFYYSVLTEKFCVS-DHALPCHHFPSPKNVINAKNSSNYSPSYVSNRKK 64

Query: 563  QSVKAVKEHVDVASNH-SDMEPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNLSA 739
            QSVKA+KEHVD+ASN  SD EP+VQMFKQLQN SCSEEDSVEV    QKSMLEKQWNLSA
Sbjct: 65   QSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQWNLSA 124

Query: 740  EKILTALPPNENNSKKKMEITCSGTSARRRRMDTR----IPK-------ISDALRSVVGP 886
            EK +T    NENN KKKM+ITCSGTSARRRRMDTR    +PK        S  LRSV+GP
Sbjct: 125  EKAMT----NENNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRSVIGP 180

Query: 887  ELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAV 1066
            EL QNR KGYINGVV QELLTH EVVQLSKKIK+GLYLEEQKSRLKERLGCEPSDDQLA+
Sbjct: 181  ELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQLAI 240

Query: 1067 SLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXX 1246
            SLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYD+ GTEMAD             
Sbjct: 241  SLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQGGLIGLLRGI 300

Query: 1247 EKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGIT 1426
            EKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGIT
Sbjct: 301  EKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGIT 360

Query: 1427 PSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPW 1606
            PSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNR+EN PW
Sbjct: 361  PSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENIPW 420

Query: 1607 HGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGL 1786
            HGVDEW LKDEVN+LISSTLRERE +I+RLYYGL NECLTWEDISRRIGLSRERVRQVGL
Sbjct: 421  HGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQVGL 480

Query: 1787 VALEKLKHAARKRRLDAMLVKH 1852
            VALEKLKHAARKRRLDAMLVKH
Sbjct: 481  VALEKLKHAARKRRLDAMLVKH 502


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  679 bits (1752), Expect = 0.0
 Identities = 356/500 (71%), Positives = 406/500 (81%), Gaps = 14/500 (2%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCHPT---RNVINAKKSSNYSPGYVSNRKR 562
            GL  G R+                + DH+L CH     +NVI AKKSS+YSP  VS+RK 
Sbjct: 9    GLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSPSCVSSRKS 68

Query: 563  QSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNLSAE 742
            QS K++KEHVD+ ++ SD+  + +M++QLQN+S  E++SVEV    QKSMLEKQWNLS E
Sbjct: 69   QSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLEKQWNLSLE 128

Query: 743  KILTALPPNENNSKKKMEITCSGTSARRRRMDTR---IPKISDA--------LRSVVGPE 889
            + LTA P +E  SKK M ITCSGTSARRRRMD+R   + + S A        LRS++GPE
Sbjct: 129  QTLTASPQHEKKSKK-MHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPLRSIIGPE 187

Query: 890  LQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAVS 1069
            L QNRLKGY+ GVVS+ELLTHAEV+QLSKKI+ GLYLEEQKSRLKERLGCEPSDDQLAVS
Sbjct: 188  LLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPSDDQLAVS 247

Query: 1070 LKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXXE 1249
            LK+SR DL+STLIECSLARE+LAMSNVRLVMSIAQRYD++G EMAD             E
Sbjct: 248  LKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGLIGLLRGIE 307

Query: 1250 KFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGITP 1429
            KFD S+G+KISTYVYWWIRQGVSRALVENSRTLRLP +LHERLSLIRNAK +L+E GITP
Sbjct: 308  KFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKARLEEKGITP 367

Query: 1430 SIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPWH 1609
            S+  IA  LNMSQKKVRNATEASSK++SLDREAFPSLNGLPGETLHSYIADN +ENNPWH
Sbjct: 368  SVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNHLENNPWH 427

Query: 1610 GVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGLV 1789
            GVD WALKDEVN+LISSTLR+RE +IIRLYYGL NECLTWEDIS+RIGLSRERVRQVGLV
Sbjct: 428  GVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLV 487

Query: 1790 ALEKLKHAARKRRLDAMLVK 1849
            ALEKLKHAARKR+LDAML+K
Sbjct: 488  ALEKLKHAARKRQLDAMLIK 507


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
            lycopersicum]
          Length = 509

 Score =  671 bits (1731), Expect = 0.0
 Identities = 357/501 (71%), Positives = 404/501 (80%), Gaps = 15/501 (2%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCH--PT-RNVINAKKSSNYSPGYVSNRKR 562
            GL  G R+                S DH+L CH  PT +NVI+AKKSS+YSP  VS+RK 
Sbjct: 9    GLSAGKRLLSSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSPSCVSSRKL 68

Query: 563  QSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEED-SVEVXXXXQKSMLEKQWNLSA 739
            QSVKA+KEHVD+AS+ SD++ + + F+QLQN+S  EED SVEV    QKSMLEKQWNLSA
Sbjct: 69   QSVKALKEHVDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSMLEKQWNLSA 128

Query: 740  EKILTALPPNENNSKKKMEITCSGTSARRRRMDTR---IPKISDA--------LRSVVGP 886
            E+ LTA    + N KK M I CSGTSARRRRMD+R   + + S A        LRS++GP
Sbjct: 129  EETLTASTQRKKNCKK-MHIACSGTSARRRRMDSRQRVLAQKSSATPISATKPLRSILGP 187

Query: 887  ELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAV 1066
            +L QNRLKGY+ G+VS+ELLTH EV+QLSKKIK GL++EEQKSRLKERLGCEPSDDQLAV
Sbjct: 188  DLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLGCEPSDDQLAV 247

Query: 1067 SLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXX 1246
            SLK+SR DL+STLIECSLARE+L+MSNVRLVMSIAQRYD+MG EMAD             
Sbjct: 248  SLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGI 307

Query: 1247 EKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGIT 1426
            EKFD S+G+KISTYVYWWIRQGVSR LVENSRTLRLP HLHERL LIRNAK++L+E GI 
Sbjct: 308  EKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNAKMRLEEKGIN 367

Query: 1427 PSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPW 1606
            PS+  IA  LNMSQKKVRNATEASSKV+SLDRE FPSLNGLPG TLHSYIADN +ENNPW
Sbjct: 368  PSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYIADNHLENNPW 427

Query: 1607 HGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGL 1786
            HGVD WALKDEVN+LISSTLRERE +IIRLYYGL +ECLTWEDIS+RIGLSRERVRQVGL
Sbjct: 428  HGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGLSRERVRQVGL 487

Query: 1787 VALEKLKHAARKRRLDAMLVK 1849
            VALEKLKHAARKRRLDAML+K
Sbjct: 488  VALEKLKHAARKRRLDAMLIK 508


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  606 bits (1562), Expect = e-170
 Identities = 325/502 (64%), Positives = 381/502 (75%), Gaps = 15/502 (2%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCHP---TRNVINAKKSSNYSPGYVS-NRK 559
            GL  G R+                + +H LT +    T+ +I AKKSSNY P + S NR 
Sbjct: 8    GLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPSFPSSNRN 67

Query: 560  RQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNLSA 739
             QS+KA+KEHVD AS  S      + F  ++ +S   + SVE     QKSMLEKQWNLS 
Sbjct: 68   TQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLEKQWNLSF 127

Query: 740  EKILTALPPNENNSKKKMEITCSGTSARRRRMDTRIPKISDA-----------LRSVVGP 886
            E+  ++  P+   S+KK+ +TCSG SAR+RR++ R   +S +           L+S V P
Sbjct: 128  ERTDSSDSPSRK-SQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQLKSAVSP 186

Query: 887  ELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAV 1066
            EL QNRLKGY+ GVVS+ELL+HAEVV+LS+ IK GL LE+ KSRLKERLGC+PSD+Q+A 
Sbjct: 187  ELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPSDEQVAT 246

Query: 1067 SLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXX 1246
            SLKISRA+L+S  I CSLAREKLAMSNVRLVMSIAQRYD+MG EMAD             
Sbjct: 247  SLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGI 306

Query: 1247 EKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGIT 1426
            EKFD S+GF+ISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIRNAKI+L+E G+T
Sbjct: 307  EKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRLEEKGVT 366

Query: 1427 PSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPW 1606
            PSI++IAE LN+SQKKVRNATEA SKVFSLDREAFPSLNGLPGET HSYIADN +ENNPW
Sbjct: 367  PSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPW 426

Query: 1607 HGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGL 1786
            HGVD+WALKDEVN LI+ TL+ERE +IIRLYYGL NE LTWEDIS+RIGLSRERVRQVGL
Sbjct: 427  HGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRERVRQVGL 486

Query: 1787 VALEKLKHAARKRRLDAMLVKH 1852
            VALEKLKHAARK++L+AMLVKH
Sbjct: 487  VALEKLKHAARKKKLEAMLVKH 508


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  606 bits (1562), Expect = e-170
 Identities = 324/502 (64%), Positives = 382/502 (76%), Gaps = 15/502 (2%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCHPT---RNVINAKKSSNYSPGYVS-NRK 559
            GL +G R+                  DH +T +PT   +NVI AKKSSNY P + S NR 
Sbjct: 9    GLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGPSFPSSNRN 68

Query: 560  RQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNLSA 739
              S+KA+KEHVD AS  S++  + + F   + +S + + SVE     QKSMLEKQWNLS 
Sbjct: 69   SHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSMLEKQWNLSF 128

Query: 740  EKILTALPPNENNSKKKMEITCSGTSARRRRMDTR---------IPKISDA--LRSVVGP 886
            E+  ++   ++ N+KK + +TCSG SAR+RR++ R         + + SD   LRSV  P
Sbjct: 129  ERTNSSDSTSKKNNKK-IPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSP 187

Query: 887  ELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAV 1066
            +L QNRLKGY+ GVVS E+L H EVV+LS+ I+ GL  E+ KSRLKERLGCEPSD+Q+A 
Sbjct: 188  DLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEPSDEQIAD 247

Query: 1067 SLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXX 1246
            SL+ISRADL+S LI+CSLAREKLAMSNVRLVMSIAQ+YD+MG EMAD             
Sbjct: 248  SLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGLIGLLRGI 307

Query: 1247 EKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGIT 1426
            EKFD S+GFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERL LIRNAKI+L+E G+T
Sbjct: 308  EKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIRLEEKGVT 367

Query: 1427 PSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPW 1606
            PSI++IAE LNMSQ+KVRNATEA SKVFSLDREAFPSLNGLPGET HSYIADNR ENNPW
Sbjct: 368  PSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRPENNPW 427

Query: 1607 HGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGL 1786
            HGVDEWALK+EVN LI STL+ERE +IIRLY+GL  ECLTWEDIS+R+GLSRERVRQVGL
Sbjct: 428  HGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRERVRQVGL 487

Query: 1787 VALEKLKHAARKRRLDAMLVKH 1852
            VALEKLKHAARKR  +AMLVKH
Sbjct: 488  VALEKLKHAARKRNTEAMLVKH 509


>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  598 bits (1543), Expect = e-168
 Identities = 328/501 (65%), Positives = 376/501 (75%), Gaps = 14/501 (2%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCHPT---RNVINAKKSSNYSPGYVS-NRK 559
            GL TG R+                + D+  + H T   +++I AKKSSN S    S NR+
Sbjct: 9    GLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQSLPSSNRR 68

Query: 560  RQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNLSA 739
             QS+KA+KEHVD AS  S  EP  Q    L+ +S   + SVE     QKSMLEKQW LS 
Sbjct: 69   AQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSMLEKQWTLSF 128

Query: 740  EKILTALPPNENNSKKKMEITCSGTSARRRRMDTR----------IPKISDALRSVVGPE 889
            E+ +    P+     KK+ +TCSG SAR+RR +T+          I   +  LRS++ PE
Sbjct: 129  ERTVFTESPSRK-IHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPE 187

Query: 890  LQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAVS 1069
            L Q+RLKGY+ GVVS ELL+HAEVV+LSKKIK GL LEE + RLKERLGCEPSD+QLA S
Sbjct: 188  LLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEPSDEQLATS 247

Query: 1070 LKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXXE 1249
            LKISRA+LRS LIECSLAREKLAMSNVRLVMSIAQRYD+MG EM+D             E
Sbjct: 248  LKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIE 307

Query: 1250 KFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGITP 1429
            KFD S+G+KISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIRNAKI+L+E GITP
Sbjct: 308  KFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITP 367

Query: 1430 SIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPWH 1609
            +I++IAE LNMSQKKVRNATEA SKVFSLDR+AFPSLNGLPGET HSYIADN VEN PWH
Sbjct: 368  TIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNHVENIPWH 427

Query: 1610 GVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGLV 1789
            GVDEWALKDEVN LI+ TL ERE +IIRLYYGL  E LTWEDIS+RIGLSRERVRQVGLV
Sbjct: 428  GVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRERVRQVGLV 487

Query: 1790 ALEKLKHAARKRRLDAMLVKH 1852
            ALEKLKHAARK++++AMLVKH
Sbjct: 488  ALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  597 bits (1540), Expect = e-168
 Identities = 314/465 (67%), Positives = 371/465 (79%), Gaps = 12/465 (2%)
 Frame = +2

Query: 494  TRNVINAKKSSNYSPGYVS-NRKRQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSE 670
            T+NV+ AKKSSNY+P + S NR+ Q +KA+KEHVD  +  S  EP+ +    ++ +S   
Sbjct: 46   TKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSEL 104

Query: 671  EDSVEVXXXXQKSMLEKQWNLSAEKILTALPPNENNSKKKMEITCSGTSARRRRMDTR-- 844
            + SVE     QKSMLEKQWNLS E+ +    P++  + KK+ +TCSG SAR+RR++++  
Sbjct: 105  DYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKK-THKKVPVTCSGVSARQRRLNSKKK 163

Query: 845  -------IPKI--SDALRSVVGPELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLY 997
                   +P+   S  LRS++ PEL QN LKGY+ GVVS+ELLTHAEVV+LSKKIK GL 
Sbjct: 164  ILSQNKSVPQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLS 223

Query: 998  LEEQKSRLKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQR 1177
            L++ K RLKERLGCEPS +QLA SL+ISR +L+S L+ECSLAREKL MSNVRLVMSIAQR
Sbjct: 224  LDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQR 283

Query: 1178 YDSMGTEMADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLP 1357
            YD+MG +MAD             EKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP
Sbjct: 284  YDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP 343

Query: 1358 IHLHERLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPS 1537
             HLHERL LIRNAK++L+E G+TPS+++IAE LNMSQKKVRNATEA  KVFSLDREAFPS
Sbjct: 344  NHLHERLGLIRNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPS 403

Query: 1538 LNGLPGETLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNE 1717
            LNGLPGET HSYIADNRVENNPWHGVD+WALKDEVN LI  TL ERE +IIRLYYGL  E
Sbjct: 404  LNGLPGETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKE 463

Query: 1718 CLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            CLTWEDIS+RIGLSRERVRQVGLVALEKLKHAARK++++AMLVKH
Sbjct: 464  CLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  596 bits (1536), Expect = e-167
 Identities = 312/465 (67%), Positives = 369/465 (79%), Gaps = 12/465 (2%)
 Frame = +2

Query: 494  TRNVINAKKSSNYSPGYVS-NRKRQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSE 670
            T+NV+ AKKSSNY+P + S NR+ Q +KA+KEHVD  +  S  EP+ +    ++ +S   
Sbjct: 46   TKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDT-NFASTAEPWAEPPNSIEEESSEL 104

Query: 671  EDSVEVXXXXQKSMLEKQWNLSAEKILTALPPNENNSKKKMEITCSGTSARRRRMDTRIP 850
            + SVE     QKSMLEKQWNLS E+ +    P++  + KK+ +TCSG SAR+RR++++  
Sbjct: 105  DYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKK-THKKVPVTCSGVSARQRRLNSKKK 163

Query: 851  KISD-----------ALRSVVGPELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLY 997
             +S             LRS++ PEL QN LKGY+ GVVS+ELLTHAEVV+LSKKIK GL 
Sbjct: 164  ILSQNKSVLQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLS 223

Query: 998  LEEQKSRLKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQR 1177
            L++ K RLKERLGCEPS +QLA SL+ISR +L+S L+ECSLAREKL MSNVRLVMSIAQR
Sbjct: 224  LDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQR 283

Query: 1178 YDSMGTEMADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLP 1357
            YD+MG +MAD             EKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP
Sbjct: 284  YDNMGADMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP 343

Query: 1358 IHLHERLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPS 1537
             HLHERL LIRNAK++L+E G+TP++++IAE LNMSQKKVRNATEA  KVFSLDREAFPS
Sbjct: 344  NHLHERLGLIRNAKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPS 403

Query: 1538 LNGLPGETLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNE 1717
            LNGLPGET HSYIADNRVENNPWHGVD+WALKDEVN LI  TL ERE +IIRLYYGL  E
Sbjct: 404  LNGLPGETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKE 463

Query: 1718 CLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            CLTWEDIS+RIGLSRERVRQVGLVALEKLKHAARK++++AMLVKH
Sbjct: 464  CLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  590 bits (1522), Expect = e-166
 Identities = 322/505 (63%), Positives = 372/505 (73%), Gaps = 18/505 (3%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHA--LTCH--PTRNVINAKKSSNYSPGYVS-NR 556
            GL TG R+                  DH   L CH   T+NV+ A+K SN S  + S NR
Sbjct: 9    GLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCSSRFPSSNR 68

Query: 557  KRQSVKAVKEHVDVASNHSDM-EPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNL 733
             +QS++A+KEHV  AS  S   + + Q    L+ +S   E SVE     QKSMLEKQWNL
Sbjct: 69   PQQSIRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKSMLEKQWNL 128

Query: 734  SAEKILTALPPNENNSKKKMEITCSGTSARRRRMDTRI------------PKISDALRSV 877
            S EK +         + KK+ +TCSG SAR+RRM +              P  +  LR++
Sbjct: 129  SFEKKVLR-DSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPSTNKPLRAI 187

Query: 878  VGPELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQ 1057
            V PEL QN +KGY+ GV+S++LLTH EVV+LSKKIK GL +EE KSRLKERLGCEPSD+Q
Sbjct: 188  VSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDEQ 247

Query: 1058 LAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXX 1237
            LA SL+ISRA L+S LIEC LAREKLAMSNVRLVMSIAQRYD+MG EMAD          
Sbjct: 248  LATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLL 307

Query: 1238 XXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKEN 1417
               EKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIRNAKI+L+E 
Sbjct: 308  RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEK 367

Query: 1418 GITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVEN 1597
            GITPSI++IAE LNMS+KKVRNATEA SKVFSLDR+AFPSLNGLPGET HSYIADNR+EN
Sbjct: 368  GITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRLEN 427

Query: 1598 NPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQ 1777
             PWHGVD WALK+EV+ LI+  L ERE +II+LYYGL NECLTWEDIS+RIGLSRERVRQ
Sbjct: 428  IPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDISKRIGLSRERVRQ 487

Query: 1778 VGLVALEKLKHAARKRRLDAMLVKH 1852
            VGLVALEKLKHAARKR ++AML+KH
Sbjct: 488  VGLVALEKLKHAARKREMEAMLLKH 512


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
            vinifera]
          Length = 497

 Score =  590 bits (1521), Expect = e-166
 Identities = 319/460 (69%), Positives = 366/460 (79%), Gaps = 6/460 (1%)
 Frame = +2

Query: 491  PTRNVINAKKSSNYSPGYVSNRKRQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSE 670
            P +N+I+AKK SNY+P   SNR  QS+KA+KEHV+ AS  S  +P       L + S   
Sbjct: 46   PPKNLISAKKPSNYTPS--SNRSIQSMKALKEHVESASAPSTADP------DLSSSSSEV 97

Query: 671  EDS---VEVXXXXQKSMLEKQWNLSAEKILTALPPNENNS--KKKMEITCSGTSARRRRM 835
            ED    VE     QKSMLEKQWNLS E+       +      +K+ E+TCSGTSAR+RR+
Sbjct: 98   EDEEYLVEAFLLLQKSMLEKQWNLSFEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRI 157

Query: 836  DTRIPKISDALRSVVGPELQ-QNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQK 1012
              R   +++  +S V   L  +NRLKGY+ GVVS+ELLTHA+VV LS KIK GL LE+ K
Sbjct: 158  SGRKRVMNEKSKSRVRAALGVENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHK 217

Query: 1013 SRLKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMG 1192
            SRLKER+G EP+D+Q+A SL++SRA+L+S LIECSLAREKLAMSNVRLVMSIAQRYD+MG
Sbjct: 218  SRLKERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMG 277

Query: 1193 TEMADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHE 1372
             EMAD             EKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP HLHE
Sbjct: 278  AEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHE 337

Query: 1373 RLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLP 1552
            RLSLIRNAKI+L+E GITPSI++IAECLNMSQKKVRNATEA SKVFSLDREAFPSLNGLP
Sbjct: 338  RLSLIRNAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLP 397

Query: 1553 GETLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWE 1732
            GETLHSYIAD R+ENNPWHGVDEWALKDEVN LI++TL ERE DIIRLYYGL NECLTWE
Sbjct: 398  GETLHSYIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWE 457

Query: 1733 DISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            DIS+RIGLSRERVRQVGLVALEKLK+AARK R++AMLVK+
Sbjct: 458  DISKRIGLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 497


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  589 bits (1519), Expect = e-165
 Identities = 318/458 (69%), Positives = 364/458 (79%), Gaps = 4/458 (0%)
 Frame = +2

Query: 491  PTRNVINAKKSSNYSPGYVSNRKRQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSE 670
            P +N+I+AKK SNY+P   SNR  QS+KA+KEHV+ AS  S  +P       L + S   
Sbjct: 117  PPKNLISAKKPSNYTPS--SNRSIQSMKALKEHVESASAPSTADP------DLSSSSSEV 168

Query: 671  EDS---VEVXXXXQKSMLEKQWNLSAEKILTALPPNENNSKKKMEITCSGTSARRRRMDT 841
            ED    VE     QKSMLEKQWNLS +             +K+ E+TCSGTSAR+RR+  
Sbjct: 169  EDEEYLVEAFLLLQKSMLEKQWNLSFKA-----------RQKRREVTCSGTSARQRRISG 217

Query: 842  RIPKISDALRSVVGPELQ-QNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSR 1018
            R   +++  +S V   L  +NRLKGY+ GVVS+ELLTHA+VV LS KIK GL LE+ KSR
Sbjct: 218  RKRVMNEKSKSRVRAALGVENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSR 277

Query: 1019 LKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTE 1198
            LKER+G EP+D+Q+A SL++SRA+L+S LIECSLAREKLAMSNVRLVMSIAQRYD+MG E
Sbjct: 278  LKERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAE 337

Query: 1199 MADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERL 1378
            MAD             EKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERL
Sbjct: 338  MADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERL 397

Query: 1379 SLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGE 1558
            SLIRNAKI+L+E GITPSI++IAECLNMSQKKVRNATEA SKVFSLDREAFPSLNGLPGE
Sbjct: 398  SLIRNAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGE 457

Query: 1559 TLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDI 1738
            TLHSYIAD R+ENNPWHGVDEWALKDEVN LI++TL ERE DIIRLYYGL NECLTWEDI
Sbjct: 458  TLHSYIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDI 517

Query: 1739 SRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            S+RIGLSRERVRQVGLVALEKLK+AARK R++AMLVK+
Sbjct: 518  SKRIGLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 555


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  588 bits (1516), Expect = e-165
 Identities = 311/462 (67%), Positives = 367/462 (79%), Gaps = 8/462 (1%)
 Frame = +2

Query: 491  PTRNVINAKKSSNYSPGY-VSNRKRQSVKAVKEHVDVASNHSDMEPFVQMFKQ--LQNKS 661
            PT+++I AKKSSNY+P +  SN++ QS+KA+KEHVD A   +D  P+ Q +    L+ +S
Sbjct: 44   PTKSLIVAKKSSNYTPTFPASNQQNQSIKALKEHVDDAPTIAD--PWFQSYNSNDLEVES 101

Query: 662  CSEEDSVEVXXXXQKSMLEKQWNLSAEKILTALPPNENNSKKKMEITCSGTSARRRRMDT 841
                 SVE     QKSMLEKQWNLS E+ +     ++    +K+ +TCSG SAR+RRM+T
Sbjct: 102  SEMGYSVEALLLLQKSMLEKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNT 161

Query: 842  RIPKISDA-----LRSVVGPELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEE 1006
            +            L+S + PEL Q+RLKGY+ G+VS+ELL+HAEVV LS+KIK GL LEE
Sbjct: 162  KRKTAIKTCGAMQLKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEE 221

Query: 1007 QKSRLKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDS 1186
             KSRLKE+LGCEPSDDQ+A SLKISR +LR+ +IECSLAREKLAMSNVRLVMSIAQ+YD+
Sbjct: 222  HKSRLKEKLGCEPSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDN 281

Query: 1187 MGTEMADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHL 1366
            +G EM D             EKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP HL
Sbjct: 282  LGAEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHL 341

Query: 1367 HERLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNG 1546
            HERLSLIRNAK +L+E GITP+I++IA+ LNMSQKKVRNATEA SK+ SLDREAFPSLNG
Sbjct: 342  HERLSLIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNG 401

Query: 1547 LPGETLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLT 1726
            L GET HSYIADNRVEN PW+GVDEWALKDEVN LI+ TL ERE +IIRLYYGL  ECLT
Sbjct: 402  LQGETHHSYIADNRVENIPWNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLT 461

Query: 1727 WEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            WEDIS+RIGLSRERVRQVGLVALEKLKHAARKR+++AML+KH
Sbjct: 462  WEDISKRIGLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH 503


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Glycine
            max] gi|571478813|ref|XP_006587676.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Glycine
            max]
          Length = 503

 Score =  580 bits (1494), Expect = e-162
 Identities = 306/460 (66%), Positives = 362/460 (78%), Gaps = 6/460 (1%)
 Frame = +2

Query: 491  PTRNVINAKKSSNYSPGY-VSNRKRQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCS 667
            PT+++I AKKSSNY+P +  SN++ QS+KA+KEHVD A   +D          L+ +S  
Sbjct: 44   PTKSLIAAKKSSNYTPTFPASNQQNQSIKALKEHVDDAPTIADSWFQSCNSNDLEVESSE 103

Query: 668  EEDSVEVXXXXQKSMLEKQWNLSAEKILTALPPNENNSKKKMEITCSGTSARRRRMDTRI 847
               SVE     QKSMLEKQWNLS E+ +     ++    KK+ +TCSG SAR+RRM+T+ 
Sbjct: 104  MGYSVEALLLLQKSMLEKQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKR 163

Query: 848  PKISDA-----LRSVVGPELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQK 1012
                       L+S + PEL Q+RLKGY+ G+VS+ELL+HAEVV LS++IK GL LEE K
Sbjct: 164  KTAIKTCGAMQLKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHK 223

Query: 1013 SRLKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMG 1192
            SRLKERLGCEPSDDQ+A+SLKISR +LR+ +IEC+LAREKLAMSNVRLVMSIAQ+YD++G
Sbjct: 224  SRLKERLGCEPSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLG 283

Query: 1193 TEMADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHE 1372
             EM D             EKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP HLHE
Sbjct: 284  AEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHE 343

Query: 1373 RLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLP 1552
            RLSLIRNAK +L+E GITP+I++IA+ LNMSQKKVRNATEA SK  SLDREAFPSLNG+ 
Sbjct: 344  RLSLIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQ 403

Query: 1553 GETLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWE 1732
            GET HSYIAD+RVEN PW+GVDEWALKDEVN LI+ TL ERE +IIRLYYGL  E LTWE
Sbjct: 404  GETHHSYIADDRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWE 463

Query: 1733 DISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            DIS+RIGLSRERVRQVGLVALEKLKHAARKR+++AML+KH
Sbjct: 464  DISKRIGLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH 503


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
            gi|557097090|gb|ESQ37598.1| hypothetical protein
            EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  573 bits (1478), Expect = e-161
 Identities = 315/513 (61%), Positives = 382/513 (74%), Gaps = 26/513 (5%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCH---PTRNVINAKK----SSNYSPGYVS 550
            GL  G R+                  DH  + +    TR+ I AKK    SSNYSP   S
Sbjct: 9    GLNAGKRLLSSSFYYSDVTEKFLSVNDHCSSQYHIASTRSGITAKKTPSSSSNYSPSLPS 68

Query: 551  N-RKRQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEED----SVEVXXXXQKSML 715
            + R  QS KA+KE VDV +  S ++P++      + +  S ED    SVE     QKSML
Sbjct: 69   SSRHTQSAKALKETVDVVA--SSVQPWLPPGSDKEMEGESYEDDLGHSVEALLLLQKSML 126

Query: 716  EKQWNLSAEKILTALPPNENN-SKKKMEITCSGTSARRRRMDTR----------IPKISD 862
            EKQWNLS EK  T+  P++   ++KK  +TCSG SAR+RR+  +          + ++S 
Sbjct: 127  EKQWNLSFEKAATSESPSKKRMTRKKNPVTCSGISARQRRIGAKKKTNMSHVKVVSEVSS 186

Query: 863  A--LRSVVGPEL-QQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERL 1033
               ++SV+  EL Q NR+KGY+ GVVS+++L+HAEVV+LSKKIK GL L++ KSRLK+RL
Sbjct: 187  GKQVKSVINSELFQNNRVKGYVRGVVSEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRL 246

Query: 1034 GCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXX 1213
            GCEPSD+QLA+SLKISR +L++ L+EC LAREKLAMSNVRLVMSIAQRYD+MG EM+D  
Sbjct: 247  GCEPSDEQLAISLKISRGELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLV 306

Query: 1214 XXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRN 1393
                       EKFD S+GF+ISTYVYWWIRQGVSRALV+NSRTLRLP HLHERL LIRN
Sbjct: 307  QGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRN 366

Query: 1394 AKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSY 1573
            AK++L+E GITPSI++IAE LNMSQKKVRNATEA SK+FSLDR+AFPSLNGLPGET HSY
Sbjct: 367  AKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSY 426

Query: 1574 IADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIG 1753
            IADNR+ENNPWHG DEWALKDEV+ LIS+TL ERE +IIRLYYGL  ECLTWEDIS+RIG
Sbjct: 427  IADNRLENNPWHGYDEWALKDEVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRIG 486

Query: 1754 LSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            LSRERVRQVGLVALEKLKHAARKR+++AM++K+
Sbjct: 487  LSRERVRQVGLVALEKLKHAARKRKMEAMILKN 519


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
            gi|550325184|gb|EEE95160.2| hypothetical protein
            POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  573 bits (1478), Expect = e-161
 Identities = 310/492 (63%), Positives = 365/492 (74%), Gaps = 5/492 (1%)
 Frame = +2

Query: 392  GLYTGNRIXXXXXXXXXXXXXXXGSGDHALTCHP---TRNVINAKKSSNYSPGYVSN-RK 559
            GL TG R+                  DH +  +    T++VI AKKSS Y P + S+ R 
Sbjct: 9    GLTTGKRLLSSSFYFSDLTEKLSNVNDHGVAHYQITTTKSVIVAKKSSKYGPSFPSSYRN 68

Query: 560  RQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSEEDSVEVXXXXQKSMLEKQWNLSA 739
              S KA+KE +D AS  S +  + +     + +S   + SVE     QKSMLEKQWNLS 
Sbjct: 69   PHSNKALKELIDTASASSTVATWFKTLDDFEEESSVLDYSVEALILLQKSMLEKQWNLSF 128

Query: 740  EKILTALPPNENNSKKKMEITCSGTSARRRRMDTRIPKISDA-LRSVVGPELQQNRLKGY 916
            E I ++       S KK+ +TCSG SAR+RR++ +    + +   S + P+L  NRLKGY
Sbjct: 129  ESINSS-DSKIKKSNKKIPVTCSGVSARQRRLNNKRKNQNQSKFMSDISPDLLLNRLKGY 187

Query: 917  INGVVSQELLTHAEVVQLSKKIKYGLYLEEQKSRLKERLGCEPSDDQLAVSLKISRADLR 1096
            + GVVS E+L H EVV+LS+ I+ GL LE+ KS LKERLGCEPSD+QLA SL+ISRADL+
Sbjct: 188  VKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEPSDEQLADSLRISRADLQ 247

Query: 1097 STLIECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADXXXXXXXXXXXXXEKFDHSRGFK 1276
            S LI+CSLAREKLAMSNVRLVMSIAQ+ D+MG EMAD             EKFD S+GFK
Sbjct: 248  SQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGLIGLLRGIEKFDSSKGFK 307

Query: 1277 ISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGITPSIEKIAECL 1456
            ISTYVYWWIRQGVSRALVEN RTLRLP HLHERL LIRNAKI+L+E G+TPSI++IAE L
Sbjct: 308  ISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESL 367

Query: 1457 NMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPWHGVDEWALKD 1636
            NMSQ+KVRNATEA SKVFSLDREAFPSLNGLPGET HSYIADNR+ENNPWHGVDEWALK+
Sbjct: 368  NMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGVDEWALKE 427

Query: 1637 EVNDLISSTLRERESDIIRLYYGLGNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAA 1816
            EVN LI S L+ERE +IIRLY+GL  ECLTWEDIS+R+GLSRERVRQVGLVALEKLKHAA
Sbjct: 428  EVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSRERVRQVGLVALEKLKHAA 487

Query: 1817 RKRRLDAMLVKH 1852
            RK +L+AMLVKH
Sbjct: 488  RKGKLEAMLVKH 499


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
            gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  573 bits (1477), Expect = e-160
 Identities = 303/469 (64%), Positives = 366/469 (78%), Gaps = 16/469 (3%)
 Frame = +2

Query: 494  TRNVINAKKSSNYSPGYVSNRK--RQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCS 667
            +++V+ AK S+N+SP Y S+ +  +Q +KAVKEHV+  S+     P  + +    +    
Sbjct: 46   SKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSS-----PIAEPWHNTTSWEDE 100

Query: 668  EED---SVEVXXXXQKSMLEKQWNLSAEKILTALPPNENNSKKKMEITCSGTSARRRRMD 838
            E +   +VE     QKSMLEKQW+LS E+ ++   P E  + KK+ +TCSG SAR+RRM 
Sbjct: 101  ETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEK-TLKKVPVTCSGVSARQRRMS 159

Query: 839  TRI-----------PKISDALRSVVGPELQQNRLKGYINGVVSQELLTHAEVVQLSKKIK 985
            ++            PKIS  LR  + PEL QNRLKGY+ G++S+ELL+HAEVV+LSKKIK
Sbjct: 160  SKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIK 219

Query: 986  YGLYLEEQKSRLKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMS 1165
             GL LEE+K+RLK+RLGCEPS+DQLA+SLKISRA+LRS ++E SLAREKLAMSNVRLVMS
Sbjct: 220  VGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMS 279

Query: 1166 IAQRYDSMGTEMADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRT 1345
            IAQRYD+MG EMAD             EKFD S+GFKISTYVYWWIRQGVSRALVENSRT
Sbjct: 280  IAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT 339

Query: 1346 LRLPIHLHERLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDRE 1525
            LRLP HLHERL LIRNAK+KL+E GITPS+++IAE LNMS+KKV+NATEA SKVFSLDRE
Sbjct: 340  LRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE 399

Query: 1526 AFPSLNGLPGETLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYG 1705
            AFPSLNGLPGET HSYIADN +ENNPWHG D W LK EVN LI+ TL +RE +IIRLY+G
Sbjct: 400  AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHG 459

Query: 1706 LGNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            L NECLTWE+IS+RIGLSRERVRQVGLVALEKLK AA+ R+++AML+KH
Sbjct: 460  LDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLLKH 508


>gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
          Length = 504

 Score =  570 bits (1470), Expect = e-160
 Identities = 305/460 (66%), Positives = 358/460 (77%), Gaps = 7/460 (1%)
 Frame = +2

Query: 494  TRNVINAKKSSNYSPGYVS-NRKRQSVKAVKEHVDVASNHSDMEPFVQMFKQLQNKSCSE 670
            T++VI AKKSSNY+P + + NR+ QS+K +KE VD A+  +D          L+ +S   
Sbjct: 45   TKSVIVAKKSSNYTPTFPAPNRQNQSIKVLKEIVDDAATVADAWFQSLSSNDLEVESSEM 104

Query: 671  EDSVEVXXXXQKSMLEKQWNLSAE-KILTALPPNENNSKKKMEITCSGTSARRRRMDTR- 844
              SVE     QKSMLEKQW+LS E + +T     E N +K   +TCSG SAR+RRM+ + 
Sbjct: 105  GYSVEALLLLQKSMLEKQWSLSFEGEGVTEHSSKEKNCRKVAAVTCSGVSARQRRMNAKR 164

Query: 845  --IPKISDA--LRSVVGPELQQNRLKGYINGVVSQELLTHAEVVQLSKKIKYGLYLEEQK 1012
                K   A  L+S + PEL QNRLKGY+ GVVS+ELL+HA+VV LS+KIK GL LEE K
Sbjct: 165  KTAVKTGGAVQLKSKISPELLQNRLKGYVKGVVSEELLSHAQVVSLSEKIKVGLSLEEHK 224

Query: 1013 SRLKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDSMG 1192
            SR+KERLGCEPSDD++A SLKIS  +LR  ++ECSLAREKLAMSNVRLVMSIAQRY++ G
Sbjct: 225  SRMKERLGCEPSDDEIATSLKISSTELREKMLECSLAREKLAMSNVRLVMSIAQRYENAG 284

Query: 1193 TEMADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHE 1372
            TEM D             EKFD S+GFKISTYVYWWIRQGVS+AL+ENSRTLRLP HLHE
Sbjct: 285  TEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALIENSRTLRLPAHLHE 344

Query: 1373 RLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLP 1552
            RLSLIRNAK++L+E GITP+I++IA+ LNMSQKKVRNATEA SK  SLDREAFPSLNGL 
Sbjct: 345  RLSLIRNAKLRLEERGITPTIDRIAQHLNMSQKKVRNATEAISKTISLDREAFPSLNGLR 404

Query: 1553 GETLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYYGLGNECLTWE 1732
            G+T HSYIADNRVEN PW GVDEWALKDEVN LI+ TL+ERE +IIRLYYGLG ECLTWE
Sbjct: 405  GDTHHSYIADNRVENIPWEGVDEWALKDEVNRLINVTLKEREREIIRLYYGLGKECLTWE 464

Query: 1733 DISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            DIS+R+GLSRERVRQVGLVALEKLKH AR R L+AML+KH
Sbjct: 465  DISKRMGLSRERVRQVGLVALEKLKHGARNRELEAMLLKH 504


>ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
            arietinum] gi|502126947|ref|XP_004499503.1| PREDICTED:
            RNA polymerase sigma factor sigA-like isoform X2 [Cicer
            arietinum]
          Length = 513

 Score =  563 bits (1452), Expect = e-158
 Identities = 298/470 (63%), Positives = 362/470 (77%), Gaps = 16/470 (3%)
 Frame = +2

Query: 491  PTRNVINAKKSSNYSPGY-VSNRKRQSVKAVKEHVDVA----SNHSDMEPFVQMFKQLQN 655
            P+++VI +KKSS  +P +  SNR+  S+KA+KEHV V     ++ ++ +P++Q      N
Sbjct: 44   PSKSVIFSKKSSKCAPTFSASNRQNHSIKALKEHVVVVDGAPTSIANSKPWIQGCSNSNN 103

Query: 656  KSCSEED------SVEVXXXXQKSMLEKQWNLSAEKILTALPPNENNSKKKMEITCSGTS 817
                E +      SV+     QKSMLEKQW LS E  +         S++K+ +TCSG S
Sbjct: 104  DLGLEVETSDIGYSVDTLLLMQKSMLEKQWCLSFESEVLTENSTRAKSRRKVTVTCSGMS 163

Query: 818  ARRRRMDTRIPKISDA-----LRSVVGPELQQNRLKGYINGVVSQELLTHAEVVQLSKKI 982
            AR+RR +T+    S +     LRS + PEL QNRLKGY+ G+VS+ELL+HA+VV+LS+KI
Sbjct: 164  ARQRRTNTKKKITSKSGYARKLRSTISPELLQNRLKGYVKGIVSEELLSHAQVVKLSQKI 223

Query: 983  KYGLYLEEQKSRLKERLGCEPSDDQLAVSLKISRADLRSTLIECSLAREKLAMSNVRLVM 1162
            K GL L+E KSRLKERLGCEPSDDQ+A SLKISRA+LR+ +IECSLAREKL MSNVRLVM
Sbjct: 224  KAGLSLDEHKSRLKERLGCEPSDDQVATSLKISRAELRAKIIECSLAREKLTMSNVRLVM 283

Query: 1163 SIAQRYDSMGTEMADXXXXXXXXXXXXXEKFDHSRGFKISTYVYWWIRQGVSRALVENSR 1342
            SIAQRYD+MG EMAD             EKFD S+GFKISTYVYWWIRQGVSRALVENSR
Sbjct: 284  SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR 343

Query: 1343 TLRLPIHLHERLSLIRNAKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDR 1522
            TLRLP HLH+RLSLIRNA+ +L+E GITP+I++IA+CLNMS KKVRNATEA +KVFS+DR
Sbjct: 344  TLRLPTHLHDRLSLIRNAEYRLEERGITPTIDRIAKCLNMSPKKVRNATEAINKVFSIDR 403

Query: 1523 EAFPSLNGLPGETLHSYIADNRVENNPWHGVDEWALKDEVNDLISSTLRERESDIIRLYY 1702
            EAFPSLNGLPG+T H++IAD R EN PW+GVDEW LK+EVN LI+ TL ERE +I+RLYY
Sbjct: 404  EAFPSLNGLPGDTHHNFIADKRFENIPWNGVDEWILKEEVNRLINVTLVEREREIVRLYY 463

Query: 1703 GLGNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 1852
            GL   CLTWEDIS+RIGLSRERVRQVGLVALEKLKH ARKR ++AML+KH
Sbjct: 464  GLDKACLTWEDISKRIGLSRERVRQVGLVALEKLKHEARKREMEAMLLKH 513