BLASTX nr result

ID: Atropa21_contig00008365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00008365
         (2089 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    59   7e-23
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    64   1e-17
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...    46   1e-14
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    59   2e-12
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    66   4e-11
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    52   4e-10
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    48   4e-09
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    39   2e-07

>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 58.9 bits (141), Expect(4) = 7e-23
 Identities = 29/81 (35%), Positives = 47/81 (58%)
 Frame = +1

Query: 517 ANRTWSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIK 696
           A + W  F + AGI ++ LQL Q+++K   S     LK + +VV  +VIW++WKR+N +K
Sbjct: 44  AAKLWILFANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLK 103

Query: 697 HEGKRPMGKVIYLVFSIIQRL 759
           H        ++Y V S + +L
Sbjct: 104 HGRPSSYNNLVYRVNSDLWKL 124



 Score = 48.1 bits (113), Expect(4) = 7e-23
 Identities = 21/55 (38%), Positives = 37/55 (67%)
 Frame = +3

Query: 1086 KTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMHLSFSHILRKGKQIADPLAN 1250
            +TDS+++ KILT+  ++PW+I + +E+I    +  H+   H+ R+G  +AD LAN
Sbjct: 234  ETDSQVLIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLAN 288



 Score = 43.9 bits (102), Expect(4) = 7e-23
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +2

Query: 776  PSIQQIPHN*GYLIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYEF-Y 952
            P +Q  P     ++  ++     L    V W+ PPEG + CNT+ ASR NP+ S+Y F  
Sbjct: 130  PKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTCNTDVASRCNPEISSYGFCL 188

Query: 953  *GT*KEFDYAQKEKIGNKTNNEAE 1024
              +  +  Y Q ++I   TN E E
Sbjct: 189  RNSVGDLVYVQGKEIQEGTNLEVE 212



 Score = 25.0 bits (53), Expect(4) = 7e-23
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 417 MLRRMHFNMTSSC*CFSNPMEETI*HLFAT 506
           +++ M  N+ S C C      ET+ HLF T
Sbjct: 11  VVQSMGINLVSRCWCCIQSKSETMSHLFLT 40


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 63.5 bits (153), Expect(4) = 1e-17
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = +1

Query: 517  ANRTWSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIK 696
            ANR W  F +FAGI I+S+ L+Q+I+   K     +LK++ + +  I++W +WKR+N  K
Sbjct: 961  ANRLWRQFSNFAGIQIESMHLQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFK 1020

Query: 697  HEGKRPMGKVIYLV 738
            H G     +V+  V
Sbjct: 1021 HRGTTTYSEVVMQV 1034



 Score = 33.1 bits (74), Expect(4) = 1e-17
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +3

Query: 1020 QRLTILEAIKYYSKNFMDCIIFKTDSRIVKKILTKE*KLPWAI 1148
            + L +LEA+ Y  +  +   I +TDS ++KK++  + K+PW +
Sbjct: 1089 EALALLEAVWYCQEKDLKEPIIETDSLVLKKMVDNQWKIPWEL 1131



 Score = 31.6 bits (70), Expect(4) = 1e-17
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +2

Query: 836  TSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYEFY*GT*K-EFDYAQKEKIGNKTN 1012
            T S  + +V  + P    + CNT+ A+RGN   S+  F     + +  YA+ + IG  TN
Sbjct: 1026 TYSEVVMQVQEEKPGRNKVKCNTDGAARGNSGASSTSFVVRDEEGDLIYARAKGIGIATN 1085

Query: 1013 NEAE 1024
             EAE
Sbjct: 1086 MEAE 1089



 Score = 29.6 bits (65), Expect(4) = 1e-17
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 420  LRRMHFNMTSSC*CFSNPMEETI*HLFATS 509
            L+RM   + S C C S   EET+ H+F T+
Sbjct: 929  LKRMKIQIVSRCWCCSETEEETMTHIFLTA 958


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score = 45.8 bits (107), Expect(3) = 1e-14
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = +2

Query: 767  LRNPSIQQIPHN*GYLIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYE 946
            +R P ++ IP +   +++  ++  S L    + W  P  G   CNT+ AS+GNP+ SA  
Sbjct: 98   VRYPWLRNIPKDWSMMVKFFENYISVLATKVIYWVPPNMGVYKCNTDCASKGNPRPSAGG 157

Query: 947  FY*GT*K-EFDYAQKEKIGNKTNNEAETDNF 1036
            F       EF Y   +++G KT+ EAE   F
Sbjct: 158  FCIRNWNGEFIYTTSQELGFKTSLEAEVIAF 188



 Score = 42.0 bits (97), Expect(3) = 1e-14
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +1

Query: 529 WSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIKHEGK 708
           W+     AGI+   LQL+  I K   +    +L+ +F  +   ++W+ WK +N +KH GK
Sbjct: 19  WNMVGRAAGIEGPFLQLKDTIFKWWNANCSAKLRPLFNAIPGFILWESWKGRNTVKHGGK 78



 Score = 40.4 bits (93), Expect(3) = 1e-14
 Identities = 19/60 (31%), Positives = 35/60 (58%)
 Frame = +3

Query: 1077 IIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMHLSFSHILRKGKQIADPLANHV 1256
            +I +TDS IV KIL    + PW+I++ +++I        +  SH+ R+G ++ +  AN +
Sbjct: 203  VILETDSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFREGNKVVNYFANFI 262


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score = 55.8 bits (133), Expect(2) = 2e-12
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
 Frame = +2

Query: 725  LYTWCSQ*FRGCYQLRNPSIQQIPHN*GYLIQMMKSGTSSLKITRVTWQLPPEGWIICNT 904
            +Y  C         ++ P I+ + ++   ++ M+++    L    V W+ P EGW+ CNT
Sbjct: 624  MYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNT 683

Query: 905  EDASRGNPQRSAYEFY*GT*KEFD--YAQKEKIGNKTNNEAE 1024
            + AS+GNP+ S+Y  Y    K  D  YA+   IG  TN EAE
Sbjct: 684  DGASKGNPRMSSYG-YCIRDKNGDLLYAEAHNIGETTNMEAE 724



 Score = 45.1 bits (105), Expect(2) = 2e-12
 Identities = 22/88 (25%), Positives = 50/88 (56%)
 Frame = +3

Query: 999  ETRQTMKQRLTILEAIKYYSKNFMDCIIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKR 1178
            ET     +  T+ +A+++  +N +  +  +TDS  ++ ++T+  K+PW +   +EEI + 
Sbjct: 717  ETTNMEAEATTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIPWELVEKLEEIHEI 776

Query: 1179 GEGMHLSFSHILRKGKQIADPLANHVLD 1262
             + + +   H+ R+  Q+AD +AN  ++
Sbjct: 777  MQQIDVQVCHVYREVNQLADFIANTTIN 804



 Score = 58.5 bits (140), Expect(2) = 1e-06
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = +1

Query: 517 ANRTWSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIK 696
           A + W  F S+AGI I+ L L+Q+I K        +L  I + VLA+++W++WKR+N  +
Sbjct: 555 AQKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYR 614

Query: 697 HEGKRPMGKVIYLVFSIIQRLLPTK 771
           H  +     + Y    I+ +L+  K
Sbjct: 615 HGKETTYNNMYYQCQLILYQLVTIK 639



 Score = 23.1 bits (48), Expect(2) = 1e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 420 LRRMHFNMTSSC*CFSNPMEETI*HLFATS 509
           L+RM   + S C C      ET+ HL  T+
Sbjct: 523 LKRMKIPVVSKCYCCKEGEMETMTHLLLTA 552


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 885

 Score = 65.9 bits (159), Expect(2) = 4e-11
 Identities = 25/83 (30%), Positives = 54/83 (65%)
 Frame = +1

Query: 523 RTWSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIKHE 702
           + W YF  FAGI+ID + L+Q+I+   K     +L+ I++ + AI++W +WKR+N +KH+
Sbjct: 586 KLWRYFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHD 645

Query: 703 GKRPMGKVIYLVFSIIQRLLPTK 771
                 +++ +V  ++++++ ++
Sbjct: 646 SSISWERMVEMVIEVVRKMVKSQ 668



 Score = 30.8 bits (68), Expect(2) = 4e-11
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 420 LRRMHFNMTSSC*CFSNPMEETI*HLFATS 509
           L++M  N+ S C C     EET+ HLF T+
Sbjct: 552 LKKMRINIVSRCWCCDRKKEETMTHLFPTA 581


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 143

 Score = 51.6 bits (122), Expect(2) = 4e-10
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +2

Query: 812  LIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYEF-Y*GT*KEFDYAQK 988
            ++ +++S   +L    V W+ P  GWI CNT+ AS+GNP +S+Y F       E  YA+ 
Sbjct: 1    MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEV 60

Query: 989  EKIGNKTNNEAET 1027
            + IG  TN +AE+
Sbjct: 61   QSIGVTTNMDAES 73



 Score = 42.0 bits (97), Expect(2) = 4e-10
 Identities = 22/72 (30%), Positives = 38/72 (52%)
 Frame = +3

Query: 1020 QRLTILEAIKYYSKNFMDCIIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMHLS 1199
            + + I +A++Y        +  +TDS  +K IL +  K PW +   VE+IL+    M ++
Sbjct: 72   ESMAIWKALQYCLSQGFQQVSLETDSLTLKNILVRNWKTPWELVERVEDILEIMSHMDVT 131

Query: 1200 FSHILRKGKQIA 1235
              HI R+  Q+A
Sbjct: 132  IKHIFREVNQLA 143


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 198

 Score = 48.1 bits (113), Expect(2) = 4e-09
 Identities = 27/73 (36%), Positives = 43/73 (58%)
 Frame = +3

Query: 1032 ILEAIKYYSKNFMDCIIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMHLSFSHI 1211
            ILEAI+Y     M  II ++DS ++ KI+ +  K+ W IA   +E+ +    + +   HI
Sbjct: 76   ILEAIRYCVNKKMRKIILESDSLLMVKIINEAWKVLWVIAEEFDELKQEMTKIEVKTQHI 135

Query: 1212 LRKGKQIADPLAN 1250
             R+G ++AD LAN
Sbjct: 136  YREGNKLADYLAN 148



 Score = 42.0 bits (97), Expect(2) = 4e-09
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +2

Query: 812  LIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYEF-Y*GT*KEFDYAQK 988
            +I+ + +  S L    V W  P E  I CNT+ AS+GNP  SAY +    +  +  +   
Sbjct: 1    MIRRLGANKSRLYHCTVRWDAPHEDVIKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTA 60

Query: 989  EKIGNKTNNEAE 1024
            E IG  TN EAE
Sbjct: 61   ENIGITTNVEAE 72


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 316

 Score = 38.5 bits (88), Expect(3) = 2e-07
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +2

Query: 794  PHN*GYLIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQR-SAYEFY*GT*KE 970
            P N   L Q  +     +K+ +V W  PPE WI  NT+ ++  NP +  A      T   
Sbjct: 115  PSNWTALYQTSEKCKHDIKVCKVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGR 174

Query: 971  FDYAQKEKIGNKTNNEAETD 1030
               A    +G  +NN+AE +
Sbjct: 175  LVLAFATSLGEGSNNQAEME 194



 Score = 32.3 bits (72), Expect(3) = 2e-07
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +1

Query: 517 ANRTWSYFCSFAGIDIDSLQLRQIILK**KSLFIER-LKLIFQVVLAIVIWDMWKRKNKI 693
           A R WS+F + AG+  +   L+  + +   +       +L+ Q     V W++WK +   
Sbjct: 22  AGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQATPTFVCWNLWKNRCAC 81

Query: 694 KHEGKRP-MGKVIYLV----FSIIQRLLP 765
           K+ GK   + +V Y +    F ++Q   P
Sbjct: 82  KYGGKATNISRVKYAIYKDTFKMLQNTFP 110



 Score = 32.3 bits (72), Expect(3) = 2e-07
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +3

Query: 1077 IIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMH-LSFSHILRKGKQIADPLANH 1253
            II + DS+IV + +TK+    W+++  +E+I +  +  H     HI R+    AD L+ H
Sbjct: 211  IILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQLIQRAHKFKCEHIFREANWTADSLSKH 270


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