BLASTX nr result
ID: Atropa21_contig00008365
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00008365
(2089 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 59 7e-23
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 64 1e-17
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 46 1e-14
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 59 2e-12
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 66 4e-11
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 52 4e-10
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 48 4e-09
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 39 2e-07
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 58.9 bits (141), Expect(4) = 7e-23
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = +1
Query: 517 ANRTWSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIK 696
A + W F + AGI ++ LQL Q+++K S LK + +VV +VIW++WKR+N +K
Sbjct: 44 AAKLWILFANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLK 103
Query: 697 HEGKRPMGKVIYLVFSIIQRL 759
H ++Y V S + +L
Sbjct: 104 HGRPSSYNNLVYRVNSDLWKL 124
Score = 48.1 bits (113), Expect(4) = 7e-23
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +3
Query: 1086 KTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMHLSFSHILRKGKQIADPLAN 1250
+TDS+++ KILT+ ++PW+I + +E+I + H+ H+ R+G +AD LAN
Sbjct: 234 ETDSQVLIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLAN 288
Score = 43.9 bits (102), Expect(4) = 7e-23
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 776 PSIQQIPHN*GYLIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYEF-Y 952
P +Q P ++ ++ L V W+ PPEG + CNT+ ASR NP+ S+Y F
Sbjct: 130 PKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTCNTDVASRCNPEISSYGFCL 188
Query: 953 *GT*KEFDYAQKEKIGNKTNNEAE 1024
+ + Y Q ++I TN E E
Sbjct: 189 RNSVGDLVYVQGKEIQEGTNLEVE 212
Score = 25.0 bits (53), Expect(4) = 7e-23
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 417 MLRRMHFNMTSSC*CFSNPMEETI*HLFAT 506
+++ M N+ S C C ET+ HLF T
Sbjct: 11 VVQSMGINLVSRCWCCIQSKSETMSHLFLT 40
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 63.5 bits (153), Expect(4) = 1e-17
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +1
Query: 517 ANRTWSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIK 696
ANR W F +FAGI I+S+ L+Q+I+ K +LK++ + + I++W +WKR+N K
Sbjct: 961 ANRLWRQFSNFAGIQIESMHLQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFK 1020
Query: 697 HEGKRPMGKVIYLV 738
H G +V+ V
Sbjct: 1021 HRGTTTYSEVVMQV 1034
Score = 33.1 bits (74), Expect(4) = 1e-17
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 1020 QRLTILEAIKYYSKNFMDCIIFKTDSRIVKKILTKE*KLPWAI 1148
+ L +LEA+ Y + + I +TDS ++KK++ + K+PW +
Sbjct: 1089 EALALLEAVWYCQEKDLKEPIIETDSLVLKKMVDNQWKIPWEL 1131
Score = 31.6 bits (70), Expect(4) = 1e-17
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 836 TSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYEFY*GT*K-EFDYAQKEKIGNKTN 1012
T S + +V + P + CNT+ A+RGN S+ F + + YA+ + IG TN
Sbjct: 1026 TYSEVVMQVQEEKPGRNKVKCNTDGAARGNSGASSTSFVVRDEEGDLIYARAKGIGIATN 1085
Query: 1013 NEAE 1024
EAE
Sbjct: 1086 MEAE 1089
Score = 29.6 bits (65), Expect(4) = 1e-17
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 420 LRRMHFNMTSSC*CFSNPMEETI*HLFATS 509
L+RM + S C C S EET+ H+F T+
Sbjct: 929 LKRMKIQIVSRCWCCSETEEETMTHIFLTA 958
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 45.8 bits (107), Expect(3) = 1e-14
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 767 LRNPSIQQIPHN*GYLIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYE 946
+R P ++ IP + +++ ++ S L + W P G CNT+ AS+GNP+ SA
Sbjct: 98 VRYPWLRNIPKDWSMMVKFFENYISVLATKVIYWVPPNMGVYKCNTDCASKGNPRPSAGG 157
Query: 947 FY*GT*K-EFDYAQKEKIGNKTNNEAETDNF 1036
F EF Y +++G KT+ EAE F
Sbjct: 158 FCIRNWNGEFIYTTSQELGFKTSLEAEVIAF 188
Score = 42.0 bits (97), Expect(3) = 1e-14
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 529 WSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIKHEGK 708
W+ AGI+ LQL+ I K + +L+ +F + ++W+ WK +N +KH GK
Sbjct: 19 WNMVGRAAGIEGPFLQLKDTIFKWWNANCSAKLRPLFNAIPGFILWESWKGRNTVKHGGK 78
Score = 40.4 bits (93), Expect(3) = 1e-14
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 1077 IIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMHLSFSHILRKGKQIADPLANHV 1256
+I +TDS IV KIL + PW+I++ +++I + SH+ R+G ++ + AN +
Sbjct: 203 VILETDSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFREGNKVVNYFANFI 262
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 55.8 bits (133), Expect(2) = 2e-12
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +2
Query: 725 LYTWCSQ*FRGCYQLRNPSIQQIPHN*GYLIQMMKSGTSSLKITRVTWQLPPEGWIICNT 904
+Y C ++ P I+ + ++ ++ M+++ L V W+ P EGW+ CNT
Sbjct: 624 MYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNT 683
Query: 905 EDASRGNPQRSAYEFY*GT*KEFD--YAQKEKIGNKTNNEAE 1024
+ AS+GNP+ S+Y Y K D YA+ IG TN EAE
Sbjct: 684 DGASKGNPRMSSYG-YCIRDKNGDLLYAEAHNIGETTNMEAE 724
Score = 45.1 bits (105), Expect(2) = 2e-12
Identities = 22/88 (25%), Positives = 50/88 (56%)
Frame = +3
Query: 999 ETRQTMKQRLTILEAIKYYSKNFMDCIIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKR 1178
ET + T+ +A+++ +N + + +TDS ++ ++T+ K+PW + +EEI +
Sbjct: 717 ETTNMEAEATTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIPWELVEKLEEIHEI 776
Query: 1179 GEGMHLSFSHILRKGKQIADPLANHVLD 1262
+ + + H+ R+ Q+AD +AN ++
Sbjct: 777 MQQIDVQVCHVYREVNQLADFIANTTIN 804
Score = 58.5 bits (140), Expect(2) = 1e-06
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +1
Query: 517 ANRTWSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIK 696
A + W F S+AGI I+ L L+Q+I K +L I + VLA+++W++WKR+N +
Sbjct: 555 AQKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYR 614
Query: 697 HEGKRPMGKVIYLVFSIIQRLLPTK 771
H + + Y I+ +L+ K
Sbjct: 615 HGKETTYNNMYYQCQLILYQLVTIK 639
Score = 23.1 bits (48), Expect(2) = 1e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 420 LRRMHFNMTSSC*CFSNPMEETI*HLFATS 509
L+RM + S C C ET+ HL T+
Sbjct: 523 LKRMKIPVVSKCYCCKEGEMETMTHLLLTA 552
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 65.9 bits (159), Expect(2) = 4e-11
Identities = 25/83 (30%), Positives = 54/83 (65%)
Frame = +1
Query: 523 RTWSYFCSFAGIDIDSLQLRQIILK**KSLFIERLKLIFQVVLAIVIWDMWKRKNKIKHE 702
+ W YF FAGI+ID + L+Q+I+ K +L+ I++ + AI++W +WKR+N +KH+
Sbjct: 586 KLWRYFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHD 645
Query: 703 GKRPMGKVIYLVFSIIQRLLPTK 771
+++ +V ++++++ ++
Sbjct: 646 SSISWERMVEMVIEVVRKMVKSQ 668
Score = 30.8 bits (68), Expect(2) = 4e-11
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 420 LRRMHFNMTSSC*CFSNPMEETI*HLFATS 509
L++M N+ S C C EET+ HLF T+
Sbjct: 552 LKKMRINIVSRCWCCDRKKEETMTHLFPTA 581
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 51.6 bits (122), Expect(2) = 4e-10
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +2
Query: 812 LIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYEF-Y*GT*KEFDYAQK 988
++ +++S +L V W+ P GWI CNT+ AS+GNP +S+Y F E YA+
Sbjct: 1 MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEV 60
Query: 989 EKIGNKTNNEAET 1027
+ IG TN +AE+
Sbjct: 61 QSIGVTTNMDAES 73
Score = 42.0 bits (97), Expect(2) = 4e-10
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +3
Query: 1020 QRLTILEAIKYYSKNFMDCIIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMHLS 1199
+ + I +A++Y + +TDS +K IL + K PW + VE+IL+ M ++
Sbjct: 72 ESMAIWKALQYCLSQGFQQVSLETDSLTLKNILVRNWKTPWELVERVEDILEIMSHMDVT 131
Query: 1200 FSHILRKGKQIA 1235
HI R+ Q+A
Sbjct: 132 IKHIFREVNQLA 143
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 48.1 bits (113), Expect(2) = 4e-09
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +3
Query: 1032 ILEAIKYYSKNFMDCIIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMHLSFSHI 1211
ILEAI+Y M II ++DS ++ KI+ + K+ W IA +E+ + + + HI
Sbjct: 76 ILEAIRYCVNKKMRKIILESDSLLMVKIINEAWKVLWVIAEEFDELKQEMTKIEVKTQHI 135
Query: 1212 LRKGKQIADPLAN 1250
R+G ++AD LAN
Sbjct: 136 YREGNKLADYLAN 148
Score = 42.0 bits (97), Expect(2) = 4e-09
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 812 LIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQRSAYEF-Y*GT*KEFDYAQK 988
+I+ + + S L V W P E I CNT+ AS+GNP SAY + + + +
Sbjct: 1 MIRRLGANKSRLYHCTVRWDAPHEDVIKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTA 60
Query: 989 EKIGNKTNNEAE 1024
E IG TN EAE
Sbjct: 61 ENIGITTNVEAE 72
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 38.5 bits (88), Expect(3) = 2e-07
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 794 PHN*GYLIQMMKSGTSSLKITRVTWQLPPEGWIICNTEDASRGNPQR-SAYEFY*GT*KE 970
P N L Q + +K+ +V W PPE WI NT+ ++ NP + A T
Sbjct: 115 PSNWTALYQTSEKCKHDIKVCKVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGR 174
Query: 971 FDYAQKEKIGNKTNNEAETD 1030
A +G +NN+AE +
Sbjct: 175 LVLAFATSLGEGSNNQAEME 194
Score = 32.3 bits (72), Expect(3) = 2e-07
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +1
Query: 517 ANRTWSYFCSFAGIDIDSLQLRQIILK**KSLFIER-LKLIFQVVLAIVIWDMWKRKNKI 693
A R WS+F + AG+ + L+ + + + +L+ Q V W++WK +
Sbjct: 22 AGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQATPTFVCWNLWKNRCAC 81
Query: 694 KHEGKRP-MGKVIYLV----FSIIQRLLP 765
K+ GK + +V Y + F ++Q P
Sbjct: 82 KYGGKATNISRVKYAIYKDTFKMLQNTFP 110
Score = 32.3 bits (72), Expect(3) = 2e-07
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 1077 IIFKTDSRIVKKILTKE*KLPWAIAIWVEEILKRGEGMH-LSFSHILRKGKQIADPLANH 1253
II + DS+IV + +TK+ W+++ +E+I + + H HI R+ AD L+ H
Sbjct: 211 IILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQLIQRAHKFKCEHIFREANWTADSLSKH 270