BLASTX nr result
ID: Atropa21_contig00008032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00008032
(766 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor ... 153 7e-35
ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor ... 147 4e-33
ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Popu... 134 3e-29
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ... 134 3e-29
emb|CBI37973.3| unnamed protein product [Vitis vinifera] 134 3e-29
ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ... 134 3e-29
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus... 134 3e-29
gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus pe... 132 1e-28
ref|XP_004290346.1| PREDICTED: probable ribosome-binding factor ... 131 2e-28
ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor ... 131 3e-28
ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citr... 131 3e-28
gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis] 130 5e-28
gb|EOX97829.1| Ribosome-binding factor A family protein isoform ... 129 8e-28
ref|XP_006412190.1| hypothetical protein EUTSA_v10026220mg [Eutr... 128 2e-27
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ... 128 2e-27
ref|NP_001149358.1| LOC100282982 [Zea mays] gi|195626630|gb|ACG3... 127 4e-27
gb|EPS65112.1| hypothetical protein M569_09671, partial [Genlise... 127 5e-27
ref|XP_004964479.1| PREDICTED: probable ribosome-binding factor ... 126 7e-27
ref|XP_002867105.1| hypothetical protein ARALYDRAFT_353351 [Arab... 126 7e-27
ref|XP_002436435.1| hypothetical protein SORBIDRAFT_10g002540 [S... 126 7e-27
>ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum tuberosum]
Length = 225
Score = 153 bits (386), Expect = 7e-35
Identities = 79/84 (94%), Positives = 82/84 (97%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS
Sbjct: 116 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 175
Query: 183 RVLAILDRIKDESENKNSQPGAAN 254
RVLAILDRIKDE+ENK+S G+AN
Sbjct: 176 RVLAILDRIKDENENKDSPSGSAN 199
>ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum lycopersicum]
Length = 221
Score = 147 bits (371), Expect = 4e-33
Identities = 76/78 (97%), Positives = 78/78 (100%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS
Sbjct: 116 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 175
Query: 183 RVLAILDRIKDESENKNS 236
RVLAILDRIKDE+ENK+S
Sbjct: 176 RVLAILDRIKDENENKDS 193
>ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Populus trichocarpa]
gi|550341216|gb|EEE86657.2| hypothetical protein
POPTR_0004s17120g [Populus trichocarpa]
Length = 224
Score = 134 bits (338), Expect = 3e-29
Identities = 68/79 (86%), Positives = 73/79 (92%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGD+RGKEVA+ GLKSKAKYVRS+LGRRMKLRLTPEIRFIEDE LERGS
Sbjct: 116 DLQVVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDEGLERGS 175
Query: 183 RVLAILDRIKDESENKNSQ 239
RV+AILDRIK E +N SQ
Sbjct: 176 RVIAILDRIKAEKDNAESQ 194
>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
isoform 2 [Vitis vinifera]
Length = 215
Score = 134 bits (338), Expect = 3e-29
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDE+GKEVA+ GLKSKAKYVRSELGRRMKLRLTPEIRF+EDESLERGS
Sbjct: 115 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 174
Query: 183 RVLAILDRIKDESENKNSQ 239
RV+AILDRIK+E + SQ
Sbjct: 175 RVIAILDRIKNEKKMAGSQ 193
>emb|CBI37973.3| unnamed protein product [Vitis vinifera]
Length = 146
Score = 134 bits (338), Expect = 3e-29
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDE+GKEVA+ GLKSKAKYVRSELGRRMKLRLTPEIRF+EDESLERGS
Sbjct: 38 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 97
Query: 183 RVLAILDRIKDESENKNSQ 239
RV+AILDRIK+E + SQ
Sbjct: 98 RVIAILDRIKNEKKMAGSQ 116
>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
isoform 1 [Vitis vinifera]
Length = 223
Score = 134 bits (338), Expect = 3e-29
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDE+GKEVA+ GLKSKAKYVRSELGRRMKLRLTPEIRF+EDESLERGS
Sbjct: 115 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 174
Query: 183 RVLAILDRIKDESENKNSQ 239
RV+AILDRIK+E + SQ
Sbjct: 175 RVIAILDRIKNEKKMAGSQ 193
>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
putative [Ricinus communis]
Length = 221
Score = 134 bits (337), Expect = 3e-29
Identities = 68/79 (86%), Positives = 73/79 (92%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGD+RGKEVA+ GLK+KAKYVRSELGRRMKLRLTPEIRFIEDES ERGS
Sbjct: 114 DLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERGS 173
Query: 183 RVLAILDRIKDESENKNSQ 239
RVLAILD+IK E EN S+
Sbjct: 174 RVLAILDKIKAEKENTGSE 192
>gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus persica]
Length = 223
Score = 132 bits (332), Expect = 1e-28
Identities = 67/79 (84%), Positives = 74/79 (93%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDERGKEVAL GLKSKAKYVR ELG+RMKLRLTPEIRFIEDESLERGS
Sbjct: 115 DLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEIRFIEDESLERGS 174
Query: 183 RVLAILDRIKDESENKNSQ 239
RV+AILD+IK+E ++ + Q
Sbjct: 175 RVIAILDKIKNEKKDPDIQ 193
>ref|XP_004290346.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 215
Score = 131 bits (330), Expect = 2e-28
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKV+VSVFGDERGKEVAL GLKSKAKYVR ELGRRMKLRLTPEIRFIEDESLERGS
Sbjct: 107 DLQVVKVFVSVFGDERGKEVALAGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGS 166
Query: 183 RVLAILDRIKDESE 224
RV+AILDRIK+E +
Sbjct: 167 RVIAILDRIKNEKK 180
>ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
isoform X1 [Citrus sinensis]
gi|568867951|ref|XP_006487287.1| PREDICTED: probable
ribosome-binding factor A, chloroplastic-like isoform X2
[Citrus sinensis]
Length = 229
Score = 131 bits (329), Expect = 3e-28
Identities = 67/79 (84%), Positives = 72/79 (91%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGD+RGKEVA+ GLKSKAKYVRS+LGRRMKLRLTPEIRFIEDES ERGS
Sbjct: 121 DLQVVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDESFERGS 180
Query: 183 RVLAILDRIKDESENKNSQ 239
RV+AILDRIK E E S+
Sbjct: 181 RVIAILDRIKAEKEAAKSK 199
>ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citrus clementina]
gi|567861752|ref|XP_006423530.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525463|gb|ESR36769.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525464|gb|ESR36770.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
Length = 226
Score = 131 bits (329), Expect = 3e-28
Identities = 67/79 (84%), Positives = 72/79 (91%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGD+RGKEVA+ GLKSKAKYVRS+LGRRMKLRLTPEIRFIEDES ERGS
Sbjct: 118 DLQVVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDESFERGS 177
Query: 183 RVLAILDRIKDESENKNSQ 239
RV+AILDRIK E E S+
Sbjct: 178 RVIAILDRIKAEKEAAKSK 196
>gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis]
Length = 225
Score = 130 bits (327), Expect = 5e-28
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDER KEVAL GLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS
Sbjct: 117 DLQVVKVYVSVFGDERRKEVALAGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 176
Query: 183 RVLAILDRIKDESE 224
RV+AILD+IK+E +
Sbjct: 177 RVIAILDKIKNEKK 190
>gb|EOX97829.1| Ribosome-binding factor A family protein isoform 1 [Theobroma
cacao] gi|508705934|gb|EOX97830.1| Ribosome-binding
factor A family protein isoform 1 [Theobroma cacao]
Length = 212
Score = 129 bits (325), Expect = 8e-28
Identities = 65/74 (87%), Positives = 71/74 (95%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDERGKE+AL GLKSK+KYVRSELG+RMKLRLTPEIRFIEDESLERGS
Sbjct: 103 DLQVVKVYVSVFGDERGKEIALAGLKSKSKYVRSELGKRMKLRLTPEIRFIEDESLERGS 162
Query: 183 RVLAILDRIKDESE 224
RV+AILD+IK E +
Sbjct: 163 RVIAILDKIKAEKK 176
>ref|XP_006412190.1| hypothetical protein EUTSA_v10026220mg [Eutrema salsugineum]
gi|557113360|gb|ESQ53643.1| hypothetical protein
EUTSA_v10026220mg [Eutrema salsugineum]
Length = 214
Score = 128 bits (322), Expect = 2e-27
Identities = 63/79 (79%), Positives = 73/79 (92%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGD+RGK+VA+ GLKSKAKYVRSELG+RMKLRLTPE+RFIEDES+ERGS
Sbjct: 111 DLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDESMERGS 170
Query: 183 RVLAILDRIKDESENKNSQ 239
RV+AILD+IK E ++ Q
Sbjct: 171 RVIAILDKIKAEKGSEGGQ 189
>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Cucumis sativus] gi|449529960|ref|XP_004171965.1|
PREDICTED: probable ribosome-binding factor A,
chloroplastic-like [Cucumis sativus]
Length = 225
Score = 128 bits (321), Expect = 2e-27
Identities = 64/75 (85%), Positives = 71/75 (94%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGDERGK+VA+ GLKSKAKYVRS LG+RMKLRLTPEIRFIEDES ERGS
Sbjct: 117 DLQVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGS 176
Query: 183 RVLAILDRIKDESEN 227
RV+AILDRIKD+ ++
Sbjct: 177 RVIAILDRIKDKKKD 191
>ref|NP_001149358.1| LOC100282982 [Zea mays] gi|195626630|gb|ACG35145.1|
ribosome-binding factor A [Zea mays]
gi|413953305|gb|AFW85954.1| ribosome-binding factor A
[Zea mays]
Length = 206
Score = 127 bits (319), Expect = 4e-27
Identities = 61/81 (75%), Positives = 73/81 (90%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQV KVYVSVFGDERGK+VA+ GLK+K KYVRS++GRRMKLRLTPEIRFIEDES+ERGS
Sbjct: 96 DLQVCKVYVSVFGDERGKKVAIEGLKAKTKYVRSQIGRRMKLRLTPEIRFIEDESMERGS 155
Query: 183 RVLAILDRIKDESENKNSQPG 245
R+LAILD++K+E E + + G
Sbjct: 156 RILAILDKLKEEREQQEGKDG 176
>gb|EPS65112.1| hypothetical protein M569_09671, partial [Genlisea aurea]
Length = 100
Score = 127 bits (318), Expect = 5e-27
Identities = 61/77 (79%), Positives = 72/77 (93%)
Frame = +3
Query: 6 LQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGSR 185
LQVVKVYVSVFGDERGKEVA+ GLKSK+KYVRSELG+R+KLRLTPE+RF+EDESLERGSR
Sbjct: 1 LQVVKVYVSVFGDERGKEVAIAGLKSKSKYVRSELGKRLKLRLTPEVRFLEDESLERGSR 60
Query: 186 VLAILDRIKDESENKNS 236
V+AILDR+K+E + +
Sbjct: 61 VIAILDRLKEEENSSKA 77
>ref|XP_004964479.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
isoform X1 [Setaria italica]
gi|514760187|ref|XP_004964480.1| PREDICTED: probable
ribosome-binding factor A, chloroplastic-like isoform X2
[Setaria italica]
Length = 207
Score = 126 bits (317), Expect = 7e-27
Identities = 65/112 (58%), Positives = 79/112 (70%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQV KVYVSVFGDERGK+VA+ GLK+K KYVRS++G+RMKLRLTPEIRFIEDES+ERGS
Sbjct: 96 DLQVCKVYVSVFGDERGKKVAIEGLKAKTKYVRSQIGKRMKLRLTPEIRFIEDESMERGS 155
Query: 183 RVLAILDRIKDESENKNSQPGAANTXXXXXXXXXXXXXXXXXXXXXGIIYVK 338
R+LAILD++K+E E + + G + IIYVK
Sbjct: 156 RILAILDKLKEEREQQEGKDGEEDAEGSYVSEEEEGDWDADEPDEEDIIYVK 207
>ref|XP_002867105.1| hypothetical protein ARALYDRAFT_353351 [Arabidopsis lyrata subsp.
lyrata] gi|297312941|gb|EFH43364.1| hypothetical protein
ARALYDRAFT_353351 [Arabidopsis lyrata subsp. lyrata]
Length = 787
Score = 126 bits (317), Expect = 7e-27
Identities = 62/72 (86%), Positives = 70/72 (97%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQVVKVYVSVFGD+RGK+VA+ GLKSKAKYVRSELG+RMKLRLTPE+RFIEDES+ERGS
Sbjct: 618 DLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDESMERGS 677
Query: 183 RVLAILDRIKDE 218
RV+AILD+IK E
Sbjct: 678 RVIAILDKIKAE 689
>ref|XP_002436435.1| hypothetical protein SORBIDRAFT_10g002540 [Sorghum bicolor]
gi|241914658|gb|EER87802.1| hypothetical protein
SORBIDRAFT_10g002540 [Sorghum bicolor]
Length = 207
Score = 126 bits (317), Expect = 7e-27
Identities = 65/112 (58%), Positives = 79/112 (70%)
Frame = +3
Query: 3 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 182
DLQV KVYVSVFGDERGK+VA+ GLK+K KYVRS++G+RMKLRLTPEIRFIEDES+ERGS
Sbjct: 96 DLQVCKVYVSVFGDERGKKVAIEGLKAKTKYVRSQIGKRMKLRLTPEIRFIEDESMERGS 155
Query: 183 RVLAILDRIKDESENKNSQPGAANTXXXXXXXXXXXXXXXXXXXXXGIIYVK 338
R+LAILD++K+E E + + G + IIYVK
Sbjct: 156 RILAILDKLKEEREQQEGKDGEEDVEGSYISEEEDGDWDADDPDEEDIIYVK 207