BLASTX nr result

ID: Atropa21_contig00007863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007863
         (1592 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004509508.1| PREDICTED: uncharacterized protein LOC101513...    69   6e-09
ref|XP_002528289.1| hypothetical protein RCOM_0456620 [Ricinus c...    66   5e-08
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    65   1e-07
ref|XP_002529794.1| hypothetical protein RCOM_0251410 [Ricinus c...    65   1e-07
ref|XP_002319599.1| predicted protein [Populus trichocarpa]            63   4e-07
emb|CAC05636.1| putative protein [Arabidopsis thaliana]                62   5e-07
ref|XP_002533092.1| conserved hypothetical protein [Ricinus comm...    60   2e-06
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    60   3e-06
gb|ABK28166.1| unknown [Arabidopsis thaliana]                          60   3e-06
gb|AAD25593.1| hypothetical protein [Arabidopsis thaliana] gi|91...    60   3e-06
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]    60   3e-06
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]    59   4e-06
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      59   8e-06

>ref|XP_004509508.1| PREDICTED: uncharacterized protein LOC101513325 [Cicer arietinum]
          Length = 1436

 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 18/107 (16%)
 Frame = +2

Query: 536 TNTHNHNPLH------------------YPAFTKYTRVEFPKFDGSDLRN*LYKVKQFFS 661
           +++HN N +H                  Y   T+ ++++FP+F+G +++  LY+ + +F 
Sbjct: 61  SSSHNRNNIHHQHSNANNSNRGDQFSTPYSCHTRLSKIDFPRFNGDNVKEWLYQCETYFM 120

Query: 662 IEEVPTH*RLNLAAIYFEGVDMTWHQRFLRSTPLGTPLTWEKYVHFL 802
           I++ P   ++ LA ++FEG  + WH  F+RS    T  TWE+YV  L
Sbjct: 121 IDDTPAEVKVKLAIMHFEGKTLKWHHAFVRSLWSTTLPTWEEYVKIL 167


>ref|XP_002528289.1| hypothetical protein RCOM_0456620 [Ricinus communis]
           gi|223532289|gb|EEF34091.1| hypothetical protein
           RCOM_0456620 [Ricinus communis]
          Length = 247

 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 29/74 (39%), Positives = 46/74 (62%)
 Frame = +2

Query: 581 KYTRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQRFLRSTP 760
           +  ++EFP+FDGS+L   L+K  +FF I+  PTH ++ LAAI+ EG  + WH+ F+++  
Sbjct: 4   RVAKIEFPRFDGSELEGWLFKCDRFFQIDYTPTHAKVKLAAIHMEGRALQWHKSFIKNRN 63

Query: 761 LGTPLTWEKYVHFL 802
                 W +YV  L
Sbjct: 64  KLEEPPWVEYVEAL 77


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
 Frame = +2

Query: 563 HYPAFTKYTR---VEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTW 733
           H+ A+   TR   ++FP+FDG+ L+  L+KV++FF ++  P   ++ +AAI+F+    TW
Sbjct: 99  HFNAYNNLTRLGKIDFPRFDGTRLKEWLFKVEEFFGVDSTPEDMKVKMAAIHFDSHASTW 158

Query: 734 HQRFLRS-TPLGTPLTWEKYVHFL 802
           HQ F++S   L     W+ YV  L
Sbjct: 159 HQSFIQSGVGLEVLYDWKGYVKLL 182


>ref|XP_002529794.1| hypothetical protein RCOM_0251410 [Ricinus communis]
           gi|223530738|gb|EEF32608.1| hypothetical protein
           RCOM_0251410 [Ricinus communis]
          Length = 295

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = +2

Query: 563 HYPAFTKYTRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQR 742
           +Y   +++T+VEFP+F G D+   L+K  +FF I++ P++ ++ LA I+ EG  + WHQ 
Sbjct: 104 NYHLASRFTKVEFPRFGGEDVEGWLFKYDRFFQIDQTPSNSQVKLALIHLEGRALQWHQT 163

Query: 743 FLRST-PLGTPLTWEKYV 793
           F+++   LG P  W  YV
Sbjct: 164 FIKNRGELGEP-PWNDYV 180


>ref|XP_002319599.1| predicted protein [Populus trichocarpa]
          Length = 188

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
 Frame = +2

Query: 518 HPPYS*TNTHNHNPLHYPAFTKYTRV--EFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RL 691
           HP  S       N   Y    K+ +   +FP F+G D+   LYK  Q+F IEEVP   +L
Sbjct: 83  HPRNSQEGMIGRNDWQYGGHYKFHKPKRDFPAFEGEDVHKWLYKCNQYFEIEEVPDAEKL 142

Query: 692 NLAAIYFEGVDMTWHQRFLRS 754
            LA+ Y +G+ + WHQ F+RS
Sbjct: 143 KLASYYLDGMALYWHQNFMRS 163


>emb|CAC05636.1| putative protein [Arabidopsis thaliana]
          Length = 221

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 29/99 (29%), Positives = 56/99 (56%)
 Frame = +2

Query: 563 HYPAFTKYTRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQR 742
           HY    +  +V+FP+F+G  +++ L++++QFF I+  P   ++++A+I+F+ +D TWHQ 
Sbjct: 59  HYRRLRRLGKVDFPRFNGDGIKDWLFQIEQFFLIDHTPEELKVDIASIHFDDIDATWHQS 118

Query: 743 FLRSTPLGTPLTWEKYVHFLYNTSYFWAMI*PLE*KYNK 859
            ++S      + W    H  +N          L+ +YNK
Sbjct: 119 IVQS------IMWRHVRHDWWNYKLL------LQVRYNK 145


>ref|XP_002533092.1| conserved hypothetical protein [Ricinus communis]
           gi|223527116|gb|EEF29294.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 29/94 (30%), Positives = 48/94 (51%)
 Frame = +2

Query: 521 PPYS*TNTHNHNPLHYPAFTKYTRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLA 700
           P  S  +  N+   +Y    ++T++EFPKFD  D    ++K   FF + +     ++ LA
Sbjct: 34  PASSGLSNPNYLSSNYQIGARFTKIEFPKFDDDDSEGRMFKFDYFFQVYKFSVDIQVKLA 93

Query: 701 AIYFEGVDMTWHQRFLRSTPLGTPLTWEKYVHFL 802
            I+ EG  + WHQ F+++        WE+YV  L
Sbjct: 94  TIHMEGRTLQWHQSFIKNRGTTDEPPWEEYVKAL 127


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +2

Query: 566 YPAFTKYTRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQRF 745
           Y   T+  +++FP+FDGS +   L+KV++FF ++  P   ++ + AI+F+    TWH  F
Sbjct: 108 YGNLTRLGKIDFPRFDGSRINEWLFKVEEFFGVDFTPEEMKVKMVAIHFDSHAATWHHSF 167

Query: 746 LRS-TPLGTPLTWEKYVHFL 802
           ++S   L     W +YV  L
Sbjct: 168 IQSGIGLDVFFNWPEYVKLL 187


>gb|ABK28166.1| unknown [Arabidopsis thaliana]
          Length = 206

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +2

Query: 563 HYPAFTKYTRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQR 742
           HY   T+  +++ P+FDG+ ++  L+KV++FF I+  P   ++ + AI+F+    TWH  
Sbjct: 124 HYGNLTRLGKIDLPRFDGTGIKEWLFKVEEFFGIDFTPADLKVKMVAIHFDSHAATWHHS 183

Query: 743 FLRS-TPLGTPLTWEKYVHFL 802
           F++S   L     W  YV  L
Sbjct: 184 FMQSGVGLEVLYDWPGYVRLL 204


>gb|AAD25593.1| hypothetical protein [Arabidopsis thaliana]
           gi|91805398|gb|ABE65428.1| hypothetical protein
           At2g05030 [Arabidopsis thaliana]
          Length = 205

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +2

Query: 563 HYPAFTKYTRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQR 742
           HY   T+  +++ P+FDG+ ++  L+KV++FF I+  P   ++ + AI+F+    TWH  
Sbjct: 124 HYGNLTRLGKIDLPRFDGTGIKEWLFKVEEFFGIDFTPADLKVKMVAIHFDSHAATWHHS 183

Query: 743 FLRS-TPLGTPLTWEKYVHFL 802
           F++S   L     W  YV  L
Sbjct: 184 FMQSGVGLEVLYDWPGYVRLL 204


>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 26/69 (37%), Positives = 42/69 (60%)
 Frame = +2

Query: 587 TRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQRFLRSTPLG 766
           T+V+FPKF+G  L   L +V+ FF ++  P   R+ LAA++ EG  + WHQ ++++    
Sbjct: 75  TKVDFPKFNGGGLDGWLLRVEYFFEVDRTPPEARVRLAALHLEGKAIQWHQGYIKTRGNE 134

Query: 767 TPLTWEKYV 793
             L W +YV
Sbjct: 135 AYLDWSEYV 143


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 26/69 (37%), Positives = 42/69 (60%)
 Frame = +2

Query: 587 TRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQRFLRSTPLG 766
           T+V+FPKF+G  L   L +V+ FF ++  P   R+ LAA++ EG  + WHQ ++++    
Sbjct: 127 TKVDFPKFNGCGLDGWLLRVEYFFEVDRTPPEARVRLAALHLEGKAIQWHQGYIKTRGNE 186

Query: 767 TPLTWEKYV 793
             L W +YV
Sbjct: 187 AYLDWSEYV 195


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 27/72 (37%), Positives = 44/72 (61%)
 Frame = +2

Query: 578 TKYTRVEFPKFDGSDLRN*LYKVKQFFSIEEVPTH*RLNLAAIYFEGVDMTWHQRFLRST 757
           T+ ++V FP FDG+ LR  LY+ +QFFS++  P   R+  A+++ EG  + WH  ++R  
Sbjct: 172 TRLSKVGFPSFDGNGLRGWLYRCEQFFSLDGTPPEMRVRYASMHMEGKALEWHHNYMRDR 231

Query: 758 PLGTPLTWEKYV 793
               P +W +YV
Sbjct: 232 FDMFP-SWSEYV 242


Top