BLASTX nr result

ID: Atropa21_contig00007758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007758
         (861 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340804.1| PREDICTED: ribonuclease E/G-like protein, ch...   338   2e-90
ref|XP_006340803.1| PREDICTED: ribonuclease E/G-like protein, ch...   338   2e-90
ref|NP_001234480.1| ribonuclease E [Solanum lycopersicum] gi|166...   338   2e-90
gb|EXB34463.1| Ribonuclease E [Morus notabilis]                        67   1e-08
emb|CBI28473.3| unnamed protein product [Vitis vinifera]               62   3e-07
emb|CAB76425.1| endoribonuclease E [Arabidopsis thaliana]              59   2e-06
ref|NP_850989.1| RNAse E/G-like protein [Arabidopsis thaliana] g...    59   2e-06
ref|NP_850988.1| RNAse E/G-like protein [Arabidopsis thaliana] g...    59   2e-06
ref|NP_850987.1| RNAse E/G-like protein [Arabidopsis thaliana] g...    59   2e-06
emb|CAD48421.1| putative endoribonuclease E [Arabidopsis thaliana]     59   2e-06
ref|NP_001189510.1| RNAse E/G-like protein [Arabidopsis thaliana...    59   2e-06
ref|XP_002883633.1| glycoside hydrolase starch-binding domain-co...    59   2e-06
ref|NP_178508.2| RNAse E/G-like protein [Arabidopsis thaliana] g...    59   2e-06
ref|XP_006418596.1| hypothetical protein EUTSA_v10002385mg [Eutr...    58   5e-06
ref|XP_006418595.1| hypothetical protein EUTSA_v10002385mg [Eutr...    58   5e-06

>ref|XP_006340804.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like isoform
            X2 [Solanum tuberosum]
          Length = 967

 Score =  338 bits (866), Expect = 2e-90
 Identities = 201/360 (55%), Positives = 231/360 (64%), Gaps = 74/360 (20%)
 Frame = -2

Query: 860  LLHHLAEADASGDVICEDKIVEGVDSENLESGFLNQSTLSE-----YEVNANDASSGTLC 696
            LLHHLAE+DASGDVIC+DKIVEG+D ENLESGFLNQSTLSE     Y+VNANDASSGTLC
Sbjct: 162  LLHHLAESDASGDVICDDKIVEGLDCENLESGFLNQSTLSETLWSKYQVNANDASSGTLC 221

Query: 695  ARYAYMEEPWLLQACTSSPSFDAEMAPDNGEVERSDNEDEA------------QPSFNDQ 552
            A YA++EEPWLLQACTSSPSFDAEMAP + EVE+SDN+DEA            Q S ++Q
Sbjct: 222  ATYAHVEEPWLLQACTSSPSFDAEMAPYDCEVEQSDNKDEAQPPFSDQLEQLAQTSSSNQ 281

Query: 551  LEQL-------------------------------AQPSTSNQHEQIPEKLLAVD----Q 477
             EQ+                                Q     ++E++ E LL       Q
Sbjct: 282  HEQIPEKLLDVDQCDAISKEDSFTTIILINSSVCTVQRIAVLENEKLVELLLEPVKNNVQ 341

Query: 476  CDEI----------SKENSFAAI---------ILINREPFIFLPFCHDSREKIINGSAVD 354
            CD +              +F  I         I  NREPFIF PFCHDSR K+ING+AVD
Sbjct: 342  CDSVYLGVVTKLAPHMGGAFVNIGTSRPSFMDIKPNREPFIFPPFCHDSRAKVINGAAVD 401

Query: 353  MLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMECVDNEFGEHESGD---ISEVLAGNCN 183
            MLEENL LPR KSTL               ESME +D+EFG+HESGD   I EVLA NCN
Sbjct: 402  MLEENLGLPRYKSTLEEVEADEIDDADIEDESMEYMDSEFGDHESGDTCDILEVLAENCN 461

Query: 182  GNVTEHGIETHSGKYPEESSRIGYQGKDPTIEHAVNGNKVSQRDKSKWVHVRKCTKIIVQ 3
            G+VTEHG++THS KYPEESS IGY+G++PTIEHA+NG KVSQRD SKWV VRK TKIIVQ
Sbjct: 462  GSVTEHGLDTHSEKYPEESSGIGYRGQNPTIEHAMNGKKVSQRDDSKWVQVRKGTKIIVQ 521


>ref|XP_006340803.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like isoform
            X1 [Solanum tuberosum]
          Length = 968

 Score =  338 bits (866), Expect = 2e-90
 Identities = 201/360 (55%), Positives = 231/360 (64%), Gaps = 74/360 (20%)
 Frame = -2

Query: 860  LLHHLAEADASGDVICEDKIVEGVDSENLESGFLNQSTLSE-----YEVNANDASSGTLC 696
            LLHHLAE+DASGDVIC+DKIVEG+D ENLESGFLNQSTLSE     Y+VNANDASSGTLC
Sbjct: 163  LLHHLAESDASGDVICDDKIVEGLDCENLESGFLNQSTLSETLWSKYQVNANDASSGTLC 222

Query: 695  ARYAYMEEPWLLQACTSSPSFDAEMAPDNGEVERSDNEDEA------------QPSFNDQ 552
            A YA++EEPWLLQACTSSPSFDAEMAP + EVE+SDN+DEA            Q S ++Q
Sbjct: 223  ATYAHVEEPWLLQACTSSPSFDAEMAPYDCEVEQSDNKDEAQPPFSDQLEQLAQTSSSNQ 282

Query: 551  LEQL-------------------------------AQPSTSNQHEQIPEKLLAVD----Q 477
             EQ+                                Q     ++E++ E LL       Q
Sbjct: 283  HEQIPEKLLDVDQCDAISKEDSFTTIILINSSVCTVQRIAVLENEKLVELLLEPVKNNVQ 342

Query: 476  CDEI----------SKENSFAAI---------ILINREPFIFLPFCHDSREKIINGSAVD 354
            CD +              +F  I         I  NREPFIF PFCHDSR K+ING+AVD
Sbjct: 343  CDSVYLGVVTKLAPHMGGAFVNIGTSRPSFMDIKPNREPFIFPPFCHDSRAKVINGAAVD 402

Query: 353  MLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMECVDNEFGEHESGD---ISEVLAGNCN 183
            MLEENL LPR KSTL               ESME +D+EFG+HESGD   I EVLA NCN
Sbjct: 403  MLEENLGLPRYKSTLEEVEADEIDDADIEDESMEYMDSEFGDHESGDTCDILEVLAENCN 462

Query: 182  GNVTEHGIETHSGKYPEESSRIGYQGKDPTIEHAVNGNKVSQRDKSKWVHVRKCTKIIVQ 3
            G+VTEHG++THS KYPEESS IGY+G++PTIEHA+NG KVSQRD SKWV VRK TKIIVQ
Sbjct: 463  GSVTEHGLDTHSEKYPEESSGIGYRGQNPTIEHAMNGKKVSQRDDSKWVQVRKGTKIIVQ 522


>ref|NP_001234480.1| ribonuclease E [Solanum lycopersicum] gi|166203325|gb|ABY84671.1|
            ribonuclease E [Solanum lycopersicum]
          Length = 935

 Score =  338 bits (866), Expect = 2e-90
 Identities = 197/360 (54%), Positives = 233/360 (64%), Gaps = 74/360 (20%)
 Frame = -2

Query: 860  LLHHLAEADASGDVICEDKIVEGVDSENLESGFLNQSTLSE-----YEVNANDASSGTLC 696
            LLHHLAE+DASGDVIC++KIVEG+D ENLESGF+NQSTLSE     YEVN+NDASSGTLC
Sbjct: 128  LLHHLAESDASGDVICDNKIVEGLDCENLESGFVNQSTLSETLWSKYEVNSNDASSGTLC 187

Query: 695  ARYAYMEEPWLLQACTSSPSFDAEMAPDNGEVERSDNEDEAQ------------PSFNDQ 552
            A YA++EEPWLLQAC  SPSFDAEMAPD+ EVE+SDN+DEAQ            PS ++Q
Sbjct: 188  ATYAHVEEPWLLQACMLSPSFDAEMAPDDFEVEQSDNKDEAQPPFSDQLEQLAQPSSSNQ 247

Query: 551  LEQL-------------------------------AQPSTSNQHEQIPEKLLAVD----Q 477
             EQ+                                Q     ++E++ E LL       Q
Sbjct: 248  HEQIPEKLLDVDQCDAISKEDSFTTIILINSSVCTVQRIAVLENEKLVELLLEPVKNNVQ 307

Query: 476  CDEI----------SKENSFAAI---------ILINREPFIFLPFCHDSREKIINGSAVD 354
            CD +              +F  I         I  NREPF+F PFCHDSREK+ING++VD
Sbjct: 308  CDSVYLGVVTKLAPHMGGAFVNIGTSRPSFMDIKPNREPFVFPPFCHDSREKVINGASVD 367

Query: 353  MLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMECVDNEFGEHESGD---ISEVLAGNCN 183
            MLEENL LPRNKSTL               ESME +D+EFG+HESGD   I EVLA NCN
Sbjct: 368  MLEENLGLPRNKSTLEEVDADEIDDADIEDESMEYMDSEFGDHESGDACDILEVLAENCN 427

Query: 182  GNVTEHGIETHSGKYPEESSRIGYQGKDPTIEHAVNGNKVSQRDKSKWVHVRKCTKIIVQ 3
            G+VTEHG+ETHS KYPEESS IGY+G++PTIE A+NG ++SQRD+SKWV VRK TKIIVQ
Sbjct: 428  GSVTEHGLETHSEKYPEESSGIGYRGQNPTIERAMNGKRISQRDESKWVQVRKGTKIIVQ 487


>gb|EXB34463.1| Ribonuclease E [Morus notabilis]
          Length = 1044

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 91/344 (26%), Positives = 139/344 (40%), Gaps = 62/344 (18%)
 Frame = -2

Query: 848  LAEADASGDVICEDKIVEGVDSENLESGFLNQSTLSEYEVNANDASSGTLCARYAYMEEP 669
            L E+  S D +   K+ E ++S+N        +  + YE      S   L  RY  +EEP
Sbjct: 265  LTESKLSSDNL---KVKEDLNSKN-------DTVTASYE----PISDSFLTERYQPVEEP 310

Query: 668  WLLQACTSSPSF------------DAEMAPDNGEVERSDN---EDEAQPSFNDQLEQLAQ 534
            WLLQ    SP F            D  M  D   +E S+    ++ +     D +  +  
Sbjct: 311  WLLQ----SPLFSIISDDLDLSEKDETMKDDKTRLEDSEKLLPQEGSNTILKDSISTIIL 366

Query: 533  PSTSN---------QHEQIPEKLLAVD----QCDEI----------SKENSFAAI----- 438
             ++S          +  Q+ E LL       QCD +              +F  I     
Sbjct: 367  INSSICTMQRIAVLEDGQLVELLLEPVKNNVQCDSVYLGVVTKLVPHMGGAFVNIGSYRP 426

Query: 437  ----ILINREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXX 270
                I  NREPFIF PF H + +  +NGS  + +E +L+   N  T              
Sbjct: 427  SLMDIKQNREPFIFPPF-HRATKFEVNGSVTETIENHLAAHGNNQTSFPTEIIDELAVVS 485

Query: 269  XXESMECVDNEFGEHESGD---ISEVLAGNCNGNVTEH------------GIETHSGKYP 135
              ES + V +++ +H+S D   +SEVLA N NG++ +H            G E H G   
Sbjct: 486  QEESEQSVLDDYEDHDSEDELDVSEVLADNLNGSIIDHDDAGANYAHNIDGREHHLG--- 542

Query: 134  EESSRIGYQGKDPTIEHAVNGNKVSQRDKSKWVHVRKCTKIIVQ 3
            EE+    +  +  +     +G+ V   +K+KW  V+K T IIVQ
Sbjct: 543  EEAITSSFHAESNSQNMKDSGHAVP--NKNKWAPVQKGTNIIVQ 584


>emb|CBI28473.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
 Frame = -2

Query: 812  EDKIVEGVDSENLESGFLNQSTLSEYEVNANDA----------SSGTLCARYAYMEEPWL 663
            ED+I + + S++L   FL+  ++ +   + N+           S+GT+  R   +EEPWL
Sbjct: 223  EDEIAKCLKSDSLSKLFLDDLSVEDKSFSDNEDTISAMSKGLDSNGTVSMRDQPVEEPWL 282

Query: 662  LQACTSSPSFDAEMAPDNGEVERSDNEDEAQPSFNDQLEQLAQPSTSNQHEQIPEKLLAV 483
            LQ  +S  +   EM  +      S N D AQ     ++  L     S  H    EKLL  
Sbjct: 283  LQ--SSLIASKEEMVSN-----MSKNIDAAQV----EVSHLKLLDQSYLH---TEKLLPE 328

Query: 482  DQCDEISKENSFAAIILINREPFIFLPFCHDSREKII-NGSAVDMLEENLSLPRNKSTL- 309
            +  + ISK++S + +ILIN         C   R  ++ +GS V++L E +       ++ 
Sbjct: 329  EGTNLISKDDSVSTVILINSS------ICTMQRIAVLEDGSLVELLLEPVKSNVQCDSVY 382

Query: 308  --XXXXXXXXXXXXXXXESMECVDNEFGEHESGDISEVL-AGNCNGNVTEHGIETHSGKY 138
                               ++   ++F EHE  D  +VL   + NG++ +H  ET +   
Sbjct: 383  LGVVTKLVPHMGGAFVNIGIQFAHDDFEEHEVEDDFDVLIKKDLNGSIVDHDSETINNFL 442

Query: 137  PEESSRIGYQGKDPTIEHAVNGNKVSQRDKSKWVHVRKCTKIIVQ 3
            P E  +  +  + P +   +  ++ +   ++KW  V+K TKIIVQ
Sbjct: 443  PVELEKGFHDSQLPPLLE-MKDSRQAYTVENKWAQVQKGTKIIVQ 486


>emb|CAB76425.1| endoribonuclease E [Arabidopsis thaliana]
          Length = 575

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
 Frame = -2

Query: 428 NREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMEC 249
           NREPFIF PFC  S+++  +GS + +   ++  P                     +  E 
Sbjct: 73  NREPFIFPPFCDGSKKQAADGSPI-LSMNDIPAPHEIEHASYDFEASSLLDIDSNDPGES 131

Query: 248 VDNEFGEHESGD--ISEVLAGNCNGNVTEHG---IETHSGKYPEESSRIGYQGKDPTIEH 84
             ++  EHE+ +  +S+ LAG  NG V  HG   + + +G  P E    G+         
Sbjct: 132 FHDDDDEHENDEYHVSDHLAGLVNGTVVNHGAVEVGSENGHIPMER---GHSADSLDSNA 188

Query: 83  AV-NGNKVSQRDKSKWVHVRKCTKIIVQ 3
           +V   +KV     +KW+ VRK TKIIVQ
Sbjct: 189 SVAKASKVMSSKDNKWIQVRKGTKIIVQ 216


>ref|NP_850989.1| RNAse E/G-like protein [Arabidopsis thaliana]
           gi|330250721|gb|AEC05815.1| RNAse E/G-like protein
           [Arabidopsis thaliana]
          Length = 619

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
 Frame = -2

Query: 428 NREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMEC 249
           NREPFIF PFC  S+++  +GS + +   ++  P                     +  E 
Sbjct: 117 NREPFIFPPFCDGSKKQAADGSPI-LSMNDIPAPHEIEHASYDFEASSLLDIDSNDPGES 175

Query: 248 VDNEFGEHESGD--ISEVLAGNCNGNVTEHG---IETHSGKYPEESSRIGYQGKDPTIEH 84
             ++  EHE+ +  +S+ LAG  NG V  HG   + + +G  P E    G+         
Sbjct: 176 FHDDDDEHENDEYHVSDHLAGLVNGTVVNHGAVEVGSENGHIPMER---GHSADSLDSNA 232

Query: 83  AV-NGNKVSQRDKSKWVHVRKCTKIIVQ 3
           +V   +KV     +KW+ VRK TKIIVQ
Sbjct: 233 SVAKASKVMSSKDNKWIQVRKGTKIIVQ 260


>ref|NP_850988.1| RNAse E/G-like protein [Arabidopsis thaliana]
           gi|330250722|gb|AEC05816.1| RNAse E/G-like protein
           [Arabidopsis thaliana]
          Length = 871

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
 Frame = -2

Query: 428 NREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMEC 249
           NREPFIF PFC  S+++  +GS + +   ++  P                     +  E 
Sbjct: 275 NREPFIFPPFCDGSKKQAADGSPI-LSMNDIPAPHEIEHASYDFEASSLLDIDSNDPGES 333

Query: 248 VDNEFGEHESGD--ISEVLAGNCNGNVTEHG---IETHSGKYPEESSRIGYQGKDPTIEH 84
             ++  EHE+ +  +S+ LAG  NG V  HG   + + +G  P E    G+         
Sbjct: 334 FHDDDDEHENDEYHVSDHLAGLVNGTVVNHGAVEVGSENGHIPMER---GHSADSLDSNA 390

Query: 83  AV-NGNKVSQRDKSKWVHVRKCTKIIVQ 3
           +V   +KV     +KW+ VRK TKIIVQ
Sbjct: 391 SVAKASKVMSSKDNKWIQVRKGTKIIVQ 418


>ref|NP_850987.1| RNAse E/G-like protein [Arabidopsis thaliana]
           gi|25991183|gb|AAN76770.1|AF450479_1 endoribonuclease
           [Arabidopsis thaliana] gi|330250719|gb|AEC05813.1| RNAse
           E/G-like protein [Arabidopsis thaliana]
          Length = 996

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
 Frame = -2

Query: 428 NREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMEC 249
           NREPFIF PFC  S+++  +GS + +   ++  P                     +  E 
Sbjct: 400 NREPFIFPPFCDGSKKQAADGSPI-LSMNDIPAPHEIEHASYDFEASSLLDIDSNDPGES 458

Query: 248 VDNEFGEHESGD--ISEVLAGNCNGNVTEHG---IETHSGKYPEESSRIGYQGKDPTIEH 84
             ++  EHE+ +  +S+ LAG  NG V  HG   + + +G  P E    G+         
Sbjct: 459 FHDDDDEHENDEYHVSDHLAGLVNGTVVNHGAVEVGSENGHIPMER---GHSADSLDSNA 515

Query: 83  AV-NGNKVSQRDKSKWVHVRKCTKIIVQ 3
           +V   +KV     +KW+ VRK TKIIVQ
Sbjct: 516 SVAKASKVMSSKDNKWIQVRKGTKIIVQ 543


>emb|CAD48421.1| putative endoribonuclease E [Arabidopsis thaliana]
          Length = 818

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
 Frame = -2

Query: 428 NREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMEC 249
           NREPFIF PFC  S+++  +GS + +   ++  P                     +  E 
Sbjct: 222 NREPFIFPPFCDGSKKQAADGSPI-LSMNDIPAPHEIEHASYDFEASSLLDIDSNDPGES 280

Query: 248 VDNEFGEHESGD--ISEVLAGNCNGNVTEHG---IETHSGKYPEESSRIGYQGKDPTIEH 84
             ++  EHE+ +  +S+ LAG  NG V  HG   + + +G  P E    G+         
Sbjct: 281 FHDDDDEHENDEYHVSDHLAGLVNGTVVNHGAVEVGSENGHIPMER---GHSADSLDSNA 337

Query: 83  AV-NGNKVSQRDKSKWVHVRKCTKIIVQ 3
           +V   +KV     +KW+ VRK TKIIVQ
Sbjct: 338 SVAKASKVMSSKDNKWIQVRKGTKIIVQ 365


>ref|NP_001189510.1| RNAse E/G-like protein [Arabidopsis thaliana]
           gi|460425419|sp|F4IV66.1|RNE_ARATH RecName:
           Full=Ribonuclease E/G-like protein, chloroplastic;
           Short=RNase E/G-like protein; AltName: Full=RNase E;
           Flags: Precursor gi|330250723|gb|AEC05817.1| RNAse
           E/G-like protein [Arabidopsis thaliana]
          Length = 1001

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
 Frame = -2

Query: 428 NREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMEC 249
           NREPFIF PFC  S+++  +GS + +   ++  P                     +  E 
Sbjct: 405 NREPFIFPPFCDGSKKQAADGSPI-LSMNDIPAPHEIEHASYDFEASSLLDIDSNDPGES 463

Query: 248 VDNEFGEHESGD--ISEVLAGNCNGNVTEHG---IETHSGKYPEESSRIGYQGKDPTIEH 84
             ++  EHE+ +  +S+ LAG  NG V  HG   + + +G  P E    G+         
Sbjct: 464 FHDDDDEHENDEYHVSDHLAGLVNGTVVNHGAVEVGSENGHIPMER---GHSADSLDSNA 520

Query: 83  AV-NGNKVSQRDKSKWVHVRKCTKIIVQ 3
           +V   +KV     +KW+ VRK TKIIVQ
Sbjct: 521 SVAKASKVMSSKDNKWIQVRKGTKIIVQ 548


>ref|XP_002883633.1| glycoside hydrolase starch-binding domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297329473|gb|EFH59892.1| glycoside hydrolase
           starch-binding domain-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 991

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
 Frame = -2

Query: 428 NREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMEC 249
           NREPFIF PFC  S+++  +GS +  + + +  P                     +  E 
Sbjct: 396 NREPFIFPPFCDGSKKQAADGSPILSIND-IPAPHEIEHASYDFEASSLLDIDSNDPGES 454

Query: 248 VDNEFGEHESGD--ISEVLAGNCNGNVTEHG---IETHSGKYPEESSRIGYQGKDPTIEH 84
             ++  EHE+ +  +S+ L G  NG V  HG   + + +G  P E        ++ +++ 
Sbjct: 455 FHDDDDEHENDEYHVSDALVGLVNGTVVNHGAVEVGSENGLIPLE--------REHSVDS 506

Query: 83  AVNGNKVSQRDK------SKWVHVRKCTKIIVQ 3
            V+   VS+  K      +KW+ VRK TKIIVQ
Sbjct: 507 LVSNPSVSKTSKAMPSKDNKWIQVRKGTKIIVQ 539


>ref|NP_178508.2| RNAse E/G-like protein [Arabidopsis thaliana]
           gi|20260628|gb|AAM13212.1| putative ribonuclease E
           [Arabidopsis thaliana] gi|31711752|gb|AAP68232.1|
           At2g04270 [Arabidopsis thaliana]
           gi|330250720|gb|AEC05814.1| RNAse E/G-like protein
           [Arabidopsis thaliana]
          Length = 713

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
 Frame = -2

Query: 428 NREPFIFLPFCHDSREKIINGSAVDMLEENLSLPRNKSTLXXXXXXXXXXXXXXXESMEC 249
           NREPFIF PFC  S+++  +GS + +   ++  P                     +  E 
Sbjct: 117 NREPFIFPPFCDGSKKQAADGSPI-LSMNDIPAPHEIEHASYDFEASSLLDIDSNDPGES 175

Query: 248 VDNEFGEHESGD--ISEVLAGNCNGNVTEHG---IETHSGKYPEESSRIGYQGKDPTIEH 84
             ++  EHE+ +  +S+ LAG  NG V  HG   + + +G  P E    G+         
Sbjct: 176 FHDDDDEHENDEYHVSDHLAGLVNGTVVNHGAVEVGSENGHIPMER---GHSADSLDSNA 232

Query: 83  AV-NGNKVSQRDKSKWVHVRKCTKIIVQ 3
           +V   +KV     +KW+ VRK TKIIVQ
Sbjct: 233 SVAKASKVMSSKDNKWIQVRKGTKIIVQ 260


>ref|XP_006418596.1| hypothetical protein EUTSA_v10002385mg [Eutrema salsugineum]
            gi|557096524|gb|ESQ37032.1| hypothetical protein
            EUTSA_v10002385mg [Eutrema salsugineum]
          Length = 957

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 85/361 (23%), Positives = 145/361 (40%), Gaps = 75/361 (20%)
 Frame = -2

Query: 860  LLHHLAEADASGDVICEDKIVEG----VDSENLESGFLNQSTLSEYEVNANDASSGTLCA 693
            L +H+  A +  +    D  +E     +  +++E        L+ +  + N   S     
Sbjct: 206  LPNHVTSAQSEDECTSADSAIEVPRPLLSDKHIEDESFFCDELATFS-SENSNFSALFSD 264

Query: 692  RYAYMEEPWLLQACTS-----SPSFDAEMAPDN-GEVERSDNEDEAQPSFNDQL---EQL 540
             Y  +EEPW LQ   +     +   D+E A ++  ++E + + DE      + L   +++
Sbjct: 265  NYQPIEEPWFLQESITLQHARNMQTDSEQAVESCDDIENNLDTDEQNHQLTETLLPDDEV 324

Query: 539  AQPSTSN------------------QHEQIPEKLLAVD----QCDEI------------- 465
             QP + +                  + E++ E LL       QCD +             
Sbjct: 325  FQPESISTTILINSSVCTVQRIAVLEGEKLVELLLEPVKTNVQCDSVYLGVVTKFVPHMG 384

Query: 464  -------SKENSFAAIILINREPFIFLPFCHDSREKIINGS----AVDMLE----ENLSL 330
                   S  +SF  I   NREPFIF PFC  S+++  +GS     VD+      E+ S 
Sbjct: 385  GAFVNIGSARHSFMDI-KPNREPFIFPPFCDGSKKQAADGSQFLSTVDIPASHGIEHASY 443

Query: 329  PRNKSTLXXXXXXXXXXXXXXXESMECVDNEFGEHESGDISEVLAGNCNGNVTEHGIETH 150
                S+L                     D++  E++   +S+ LAG  NG V  HG E  
Sbjct: 444  DFEASSLLDIDSNDPGESFHD-------DDDDHENDEYHVSDALAGLVNGTVVNHG-EVD 495

Query: 149  SG---------KYPEESSRIGYQG--KDPTIEHAVNGNKVSQRDK-SKWVHVRKCTKIIV 6
             G         ++ E  S  G+    ++P+ ++ V+   V++  + +KW+ VRK TKIIV
Sbjct: 496  GGSEKCNQGDERHLEVGSENGFVPLEREPSADYLVSNASVAKTSRDNKWIQVRKGTKIIV 555

Query: 5    Q 3
            Q
Sbjct: 556  Q 556


>ref|XP_006418595.1| hypothetical protein EUTSA_v10002385mg [Eutrema salsugineum]
            gi|557096523|gb|ESQ37031.1| hypothetical protein
            EUTSA_v10002385mg [Eutrema salsugineum]
          Length = 1009

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 85/361 (23%), Positives = 145/361 (40%), Gaps = 75/361 (20%)
 Frame = -2

Query: 860  LLHHLAEADASGDVICEDKIVEG----VDSENLESGFLNQSTLSEYEVNANDASSGTLCA 693
            L +H+  A +  +    D  +E     +  +++E        L+ +  + N   S     
Sbjct: 206  LPNHVTSAQSEDECTSADSAIEVPRPLLSDKHIEDESFFCDELATFS-SENSNFSALFSD 264

Query: 692  RYAYMEEPWLLQACTS-----SPSFDAEMAPDN-GEVERSDNEDEAQPSFNDQL---EQL 540
             Y  +EEPW LQ   +     +   D+E A ++  ++E + + DE      + L   +++
Sbjct: 265  NYQPIEEPWFLQESITLQHARNMQTDSEQAVESCDDIENNLDTDEQNHQLTETLLPDDEV 324

Query: 539  AQPSTSN------------------QHEQIPEKLLAVD----QCDEI------------- 465
             QP + +                  + E++ E LL       QCD +             
Sbjct: 325  FQPESISTTILINSSVCTVQRIAVLEGEKLVELLLEPVKTNVQCDSVYLGVVTKFVPHMG 384

Query: 464  -------SKENSFAAIILINREPFIFLPFCHDSREKIINGS----AVDMLE----ENLSL 330
                   S  +SF  I   NREPFIF PFC  S+++  +GS     VD+      E+ S 
Sbjct: 385  GAFVNIGSARHSFMDI-KPNREPFIFPPFCDGSKKQAADGSQFLSTVDIPASHGIEHASY 443

Query: 329  PRNKSTLXXXXXXXXXXXXXXXESMECVDNEFGEHESGDISEVLAGNCNGNVTEHGIETH 150
                S+L                     D++  E++   +S+ LAG  NG V  HG E  
Sbjct: 444  DFEASSLLDIDSNDPGESFHD-------DDDDHENDEYHVSDALAGLVNGTVVNHG-EVD 495

Query: 149  SG---------KYPEESSRIGYQG--KDPTIEHAVNGNKVSQRDK-SKWVHVRKCTKIIV 6
             G         ++ E  S  G+    ++P+ ++ V+   V++  + +KW+ VRK TKIIV
Sbjct: 496  GGSEKCNQGDERHLEVGSENGFVPLEREPSADYLVSNASVAKTSRDNKWIQVRKGTKIIV 555

Query: 5    Q 3
            Q
Sbjct: 556  Q 556


Top