BLASTX nr result

ID: Atropa21_contig00007714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007714
         (534 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263...    83   5e-17
gb|ADU56213.1| gag-pol polyprotein [Solanum lycopersicum]              76   5e-12
ref|XP_004253493.1| PREDICTED: uncharacterized protein LOC101265...    75   9e-12
emb|CAA73301.1| hypothetical protein [Zea mays]                        73   3e-11
ref|XP_004228770.1| PREDICTED: uncharacterized protein LOC101246...    70   4e-10
ref|XP_006343534.1| PREDICTED: uncharacterized protein LOC102605...    64   3e-08
ref|XP_004250589.1| PREDICTED: uncharacterized protein LOC101263...    59   5e-07
ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266...    59   7e-07
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]      59   9e-07
ref|XP_006366121.1| PREDICTED: uncharacterized protein LOC102584...    57   3e-06

>ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263429 [Solanum
           lycopersicum]
          Length = 413

 Score = 83.2 bits (204), Expect(2) = 5e-17
 Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = +3

Query: 306 QGGIGSFYSGSVGSQFGR----EGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCL 473
           Q G G  +SG  GS  GR    EG+Q +   +HCY FPGR + +ASD++IT II I H  
Sbjct: 305 QNGRGGSHSGRGGSPSGRGGGREGSQIDGGRSHCYAFPGRSEAKASDAVITGIIPICHRP 364

Query: 474 VTLLFDPGSTYSYMSTYFAP 533
            T+LFD GSTYSY+ TYFAP
Sbjct: 365 ATVLFDQGSTYSYVYTYFAP 384



 Score = 30.0 bits (66), Expect(2) = 5e-17
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +1

Query: 214 RESPKLRCGGQHQSSQTPTLRAAAHLARG 300
           R+ P+ R GG HQ SQ  T R A   ARG
Sbjct: 274 RDCPRTRRGGLHQGSQALTSRVAQPPARG 302


>gb|ADU56213.1| gag-pol polyprotein [Solanum lycopersicum]
          Length = 329

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/75 (46%), Positives = 51/75 (68%)
 Frame = +3

Query: 306 QGGIGSFYSGSVGSQFGREGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCLVTLL 485
           Q G G   +G+  SQ GR G +  ++ AHCY FPGR + E SD++IT  + +  C+ ++L
Sbjct: 108 QNGRGDGQTGATTSQHGR-GNEQTNERAHCYAFPGRSEAETSDTVITGNLLVCDCMTSVL 166

Query: 486 FDPGSTYSYMSTYFA 530
           FDPGST+SY+S+ FA
Sbjct: 167 FDPGSTFSYVSSSFA 181


>ref|XP_004253493.1| PREDICTED: uncharacterized protein LOC101265119 [Solanum
           lycopersicum]
          Length = 518

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 37/75 (49%), Positives = 52/75 (69%)
 Frame = +3

Query: 306 QGGIGSFYSGSVGSQFGREGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCLVTLL 485
           Q G G+  +G+  SQ GR G    +D AHCY FPGR + EAS+++IT  I +  C+ ++L
Sbjct: 180 QYGRGNGQTGATTSQHGR-GNGQTNDRAHCYAFPGRSEVEASNAVITGNILVCDCMASVL 238

Query: 486 FDPGSTYSYMSTYFA 530
           FDPGST+SY+S+ FA
Sbjct: 239 FDPGSTFSYVSSSFA 253


>emb|CAA73301.1| hypothetical protein [Zea mays]
          Length = 132

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 35/74 (47%), Positives = 50/74 (67%)
 Frame = +3

Query: 306 QGGIGSFYSGSVGSQFGREGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCLVTLL 485
           Q G G+  +G+  SQ GR G    +D AHCY FPGR + EASD++IT  + +  C+ ++L
Sbjct: 12  QNGRGNGQTGATTSQHGR-GNGQTNDRAHCYAFPGRSEAEASDAVITGNLLVCDCMASVL 70

Query: 486 FDPGSTYSYMSTYF 527
           FDP ST+SY+S+ F
Sbjct: 71  FDPRSTFSYISSSF 84


>ref|XP_004228770.1| PREDICTED: uncharacterized protein LOC101246080 [Solanum
           lycopersicum]
          Length = 282

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
 Frame = +3

Query: 330 SGSVGSQFGREGTQDESDC--AHCYTFPGRPKEEASDSIITSIIQIFHCLVTLLFDPGST 503
           SG    Q G +GT         HCY FPGRP+ E SD++I  II I+H  V+LLFD  ST
Sbjct: 84  SGVAAQQSGGKGTTQAGGARGGHCYAFPGRPEAETSDAVIKGIIPIYHPPVSLLFDLVST 143

Query: 504 YSYMSTYF 527
           +SY+STYF
Sbjct: 144 FSYVSTYF 151


>ref|XP_006343534.1| PREDICTED: uncharacterized protein LOC102605935 [Solanum tuberosum]
          Length = 470

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
 Frame = +3

Query: 306 QGGIGSFYSGSVGS---QFGREGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCLV 476
           QGG G   +G+ GS   Q GRE  + + D AHCYTF G+ + EASD++ITSII I   + 
Sbjct: 390 QGGRGGRENGNAGSGNAQLGREVARHD-DRAHCYTFSGKNEAEASDAVITSIISICDRMA 448

Query: 477 TLLFDPGST 503
            +LFDPGS+
Sbjct: 449 NVLFDPGSS 457


>ref|XP_004250589.1| PREDICTED: uncharacterized protein LOC101263780 [Solanum
           lycopersicum]
          Length = 508

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/64 (45%), Positives = 36/64 (56%)
 Frame = +3

Query: 342 GSQFGREGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCLVTLLFDPGSTYSYMST 521
           G   GR G        H Y  P R   EASD +I+  + + H   T+LFDPGST+SY+S 
Sbjct: 202 GRSGGRPGAPGRGAQGHFYAAPTRAAAEASDDVISGTLFLCHQPATVLFDPGSTFSYVSI 261

Query: 522 YFAP 533
           YFAP
Sbjct: 262 YFAP 265


>ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266468 [Solanum
           lycopersicum]
          Length = 927

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/64 (45%), Positives = 38/64 (59%)
 Frame = +3

Query: 342 GSQFGREGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCLVTLLFDPGSTYSYMST 521
           GS  GR G   +    H Y  P R   EASD +I+  + + +   T+LFDPGST+SY+S 
Sbjct: 499 GSLGGRSGAPGKGAQGHFYAAPTRAAAEASDDVISGTLFLCYQPATVLFDPGSTFSYVSI 558

Query: 522 YFAP 533
           YFAP
Sbjct: 559 YFAP 562


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/64 (43%), Positives = 35/64 (54%)
 Frame = +3

Query: 342 GSQFGREGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCLVTLLFDPGSTYSYMST 521
           G   GR          H Y  P R   EASD +IT ++ + H   T+LFDPGST+SY+  
Sbjct: 619 GRLSGRSDASGRGAQGHFYAAPARATAEASDDVITGMLLLCHQPATVLFDPGSTFSYVFV 678

Query: 522 YFAP 533
           YFAP
Sbjct: 679 YFAP 682


>ref|XP_006366121.1| PREDICTED: uncharacterized protein LOC102584602 [Solanum tuberosum]
          Length = 1113

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 34/60 (56%)
 Frame = +3

Query: 354 GREGTQDESDCAHCYTFPGRPKEEASDSIITSIIQIFHCLVTLLFDPGSTYSYMSTYFAP 533
           GR          H Y  P R   EASD ++T  + + H   T+LFDPGST+SY+S YFAP
Sbjct: 506 GRSDASGRCVQGHFYAAPTRATAEASDDVLTGTLLLCHQPATVLFDPGSTFSYVSIYFAP 565


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