BLASTX nr result

ID: Atropa21_contig00007659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007659
         (747 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich protein 2 gi|1...    75   4e-14
ref|XP_004231017.1| PREDICTED: cold shock domain-containing prot...    69   4e-10
ref|XP_004231018.1| PREDICTED: cold shock domain-containing prot...    69   4e-10
ref|XP_004231019.1| PREDICTED: cold shock domain-containing prot...    69   4e-10
ref|XP_004231020.1| PREDICTED: cold shock domain-containing prot...    69   4e-10
ref|XP_004231021.1| PREDICTED: cold shock domain-containing prot...    69   4e-10
ref|XP_004231022.1| PREDICTED: cold shock domain-containing prot...    69   4e-10
ref|XP_004248660.1| PREDICTED: cold shock domain-containing prot...    64   4e-10
dbj|BAH56877.1| AT4G38680 [Arabidopsis thaliana]                       63   2e-09
ref|NP_195580.1| glycine rich protein 2 [Arabidopsis thaliana] g...    63   2e-09
ref|XP_006359670.1| PREDICTED: glycine-rich protein 2-like [Sola...    63   2e-09
ref|XP_006366613.1| PREDICTED: glycine-rich protein 2-like [Sola...    61   2e-09
ref|XP_004144919.1| PREDICTED: glycine-rich protein 2-like [Cucu...    65   3e-09
ref|XP_002868854.1| hypothetical protein ARALYDRAFT_912317 [Arab...    63   5e-09
gb|EXB39284.1| Glycine-rich protein 2b [Morus notabilis]               63   5e-09
emb|CBI37898.3| unnamed protein product [Vitis vinifera]               62   6e-09
emb|CAN81359.1| hypothetical protein VITISV_040408 [Vitis vinifera]    62   6e-09
ref|XP_002277628.1| PREDICTED: glycine-rich protein 2-like [Viti...    62   6e-09
gb|ESW08176.1| hypothetical protein PHAVU_009G025100g [Phaseolus...    64   6e-09
ref|NP_179702.1| glycine-rich protein 2B [Arabidopsis thaliana] ...    62   8e-09

>sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich protein 2 gi|19743|emb|CAA42622.1|
           nsGRP-2 [Nicotiana sylvestris]
          Length = 214

 Score = 75.1 bits (183), Expect(2) = 4e-14
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MAEE G+R KGTVKWFSDQKGFGFITPDDGGEDLFV
Sbjct: 1   MAEESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFV 36



 Score = 29.6 bits (65), Expect(2) = 4e-14
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGPDGAAV
Sbjct: 68  KAVDVTGPDGAAV 80


>ref|XP_004231017.1| PREDICTED: cold shock domain-containing protein 4-like isoform 1
           [Solanum lycopersicum]
          Length = 214

 Score = 68.9 bits (167), Expect(2) = 4e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA+EG ER+KGTVKWFSDQKGFGFITP DG EDLFV
Sbjct: 1   MADEGCERLKGTVKWFSDQKGFGFITPADGSEDLFV 36



 Score = 22.3 bits (46), Expect(2) = 4e-10
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA DVTGP+ AAV
Sbjct: 68  KASDVTGPNEAAV 80


>ref|XP_004231018.1| PREDICTED: cold shock domain-containing protein 4-like isoform 2
           [Solanum lycopersicum]
          Length = 210

 Score = 68.9 bits (167), Expect(2) = 4e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA+EG ER+KGTVKWFSDQKGFGFITP DG EDLFV
Sbjct: 1   MADEGCERLKGTVKWFSDQKGFGFITPADGSEDLFV 36



 Score = 22.3 bits (46), Expect(2) = 4e-10
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA DVTGP+ AAV
Sbjct: 68  KASDVTGPNEAAV 80


>ref|XP_004231019.1| PREDICTED: cold shock domain-containing protein 4-like isoform 3
           [Solanum lycopersicum]
          Length = 192

 Score = 68.9 bits (167), Expect(2) = 4e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA+EG ER+KGTVKWFSDQKGFGFITP DG EDLFV
Sbjct: 1   MADEGCERLKGTVKWFSDQKGFGFITPADGSEDLFV 36



 Score = 22.3 bits (46), Expect(2) = 4e-10
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA DVTGP+ AAV
Sbjct: 68  KASDVTGPNEAAV 80


>ref|XP_004231020.1| PREDICTED: cold shock domain-containing protein 4-like isoform 4
           [Solanum lycopersicum]
          Length = 191

 Score = 68.9 bits (167), Expect(2) = 4e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA+EG ER+KGTVKWFSDQKGFGFITP DG EDLFV
Sbjct: 1   MADEGCERLKGTVKWFSDQKGFGFITPADGSEDLFV 36



 Score = 22.3 bits (46), Expect(2) = 4e-10
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA DVTGP+ AAV
Sbjct: 68  KASDVTGPNEAAV 80


>ref|XP_004231021.1| PREDICTED: cold shock domain-containing protein 4-like isoform 5
           [Solanum lycopersicum]
          Length = 185

 Score = 68.9 bits (167), Expect(2) = 4e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA+EG ER+KGTVKWFSDQKGFGFITP DG EDLFV
Sbjct: 1   MADEGCERLKGTVKWFSDQKGFGFITPADGSEDLFV 36



 Score = 22.3 bits (46), Expect(2) = 4e-10
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA DVTGP+ AAV
Sbjct: 68  KASDVTGPNEAAV 80


>ref|XP_004231022.1| PREDICTED: cold shock domain-containing protein 4-like isoform 6
           [Solanum lycopersicum]
          Length = 179

 Score = 68.9 bits (167), Expect(2) = 4e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA+EG ER+KGTVKWFSDQKGFGFITP DG EDLFV
Sbjct: 1   MADEGCERLKGTVKWFSDQKGFGFITPADGSEDLFV 36



 Score = 22.3 bits (46), Expect(2) = 4e-10
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA DVTGP+ AAV
Sbjct: 68  KASDVTGPNEAAV 80


>ref|XP_004248660.1| PREDICTED: cold shock domain-containing protein 4-like [Solanum
           lycopersicum]
          Length = 169

 Score = 63.5 bits (153), Expect(2) = 4e-10
 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
 Frame = +2

Query: 32  MAEEG--GERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA EG  G+R KGTVKWFSDQKGFGF+TP+DGG +LFV
Sbjct: 1   MASEGNKGQRQKGTVKWFSDQKGFGFVTPNDGGPELFV 38



 Score = 27.7 bits (60), Expect(2) = 4e-10
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGPDGA V
Sbjct: 70  KAVDVTGPDGAPV 82


>dbj|BAH56877.1| AT4G38680 [Arabidopsis thaliana]
          Length = 204

 Score = 63.2 bits (152), Expect(2) = 2e-09
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +2

Query: 44  GGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           GGER KG+VKWF  QKGFGFITPDDGG+DLFV
Sbjct: 7   GGERRKGSVKWFDTQKGFGFITPDDGGDDLFV 38



 Score = 25.8 bits (55), Expect(2) = 2e-09
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA+DV+GPDGA V
Sbjct: 70  KAIDVSGPDGAPV 82


>ref|NP_195580.1| glycine rich protein 2 [Arabidopsis thaliana]
           gi|75319603|sp|Q41188.1|CSP2_ARATH RecName: Full=Cold
           shock protein 2; Short=AtCSP2; AltName: Full=Cold shock
           domain-containing protein 2; AltName: Full=Glycine-rich
           protein 2; Short=AtGRP2
           gi|13430580|gb|AAK25912.1|AF360202_1 putative
           glycine-rich protein GRP2 [Arabidopsis thaliana]
           gi|14326487|gb|AAK60289.1|AF385696_1
           AT4g38680/F20M13_240 [Arabidopsis thaliana]
           gi|259445|gb|AAB24074.1| glycine-rich protein
           [Arabidopsis thaliana] gi|4467155|emb|CAB37524.1|
           glycine-rich protein 2 (GRP2) [Arabidopsis thaliana]
           gi|7270851|emb|CAB80532.1| glycine-rich protein 2 (GRP2)
           [Arabidopsis thaliana] gi|14532850|gb|AAK64107.1|
           putative glycine-rich protein 2 [Arabidopsis thaliana]
           gi|22137152|gb|AAM91421.1| AT4g38680/F20M13_240
           [Arabidopsis thaliana] gi|332661564|gb|AEE86964.1|
           glycine rich protein 2 [Arabidopsis thaliana]
          Length = 203

 Score = 63.2 bits (152), Expect(2) = 2e-09
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +2

Query: 44  GGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           GGER KG+VKWF  QKGFGFITPDDGG+DLFV
Sbjct: 7   GGERRKGSVKWFDTQKGFGFITPDDGGDDLFV 38



 Score = 25.8 bits (55), Expect(2) = 2e-09
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA+DV+GPDGA V
Sbjct: 70  KAIDVSGPDGAPV 82


>ref|XP_006359670.1| PREDICTED: glycine-rich protein 2-like [Solanum tuberosum]
          Length = 203

 Score = 62.8 bits (151), Expect(2) = 2e-09
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA+E  ER+ G VKWFSDQKGFGFITP DG EDLFV
Sbjct: 1   MADESCERLTGIVKWFSDQKGFGFITPSDGSEDLFV 36



 Score = 25.8 bits (55), Expect(2) = 2e-09
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA DVTGPDGA V
Sbjct: 68  KACDVTGPDGAPV 80


>ref|XP_006366613.1| PREDICTED: glycine-rich protein 2-like [Solanum tuberosum]
          Length = 197

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 2/38 (5%)
 Frame = +2

Query: 32  MAEEGGE--RVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           MA E  +  R KGTVKWFSDQKGFGF+TPDDGG +LFV
Sbjct: 1   MASESNQVQRKKGTVKWFSDQKGFGFVTPDDGGAELFV 38



 Score = 27.7 bits (60), Expect(2) = 2e-09
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGPDGA V
Sbjct: 70  KAVDVTGPDGAPV 82


>ref|XP_004144919.1| PREDICTED: glycine-rich protein 2-like [Cucumis sativus]
          Length = 230

 Score = 65.5 bits (158), Expect(2) = 3e-09
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +2

Query: 26  KEMAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           K+  EE GERV G VKWFSDQKG+GFI+P+DGGEDLFV
Sbjct: 22  KKEIEEMGERVSGKVKWFSDQKGYGFISPNDGGEDLFV 59



 Score = 22.7 bits (47), Expect(2) = 3e-09
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGP  A+V
Sbjct: 91  KAVDVTGPGEASV 103


>ref|XP_002868854.1| hypothetical protein ARALYDRAFT_912317 [Arabidopsis lyrata subsp.
           lyrata] gi|297314690|gb|EFH45113.1| hypothetical protein
           ARALYDRAFT_912317 [Arabidopsis lyrata subsp. lyrata]
          Length = 195

 Score = 63.2 bits (152), Expect(2) = 5e-09
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +2

Query: 44  GGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           GGER KG+VKWF  QKGFGFITPDDGG+DLFV
Sbjct: 7   GGERRKGSVKWFDTQKGFGFITPDDGGDDLFV 38



 Score = 24.3 bits (51), Expect(2) = 5e-09
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA+DV+GPDG  V
Sbjct: 70  KAIDVSGPDGVPV 82


>gb|EXB39284.1| Glycine-rich protein 2b [Morus notabilis]
          Length = 195

 Score = 62.8 bits (151), Expect(2) = 5e-09
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +2

Query: 47  GERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           GERV G VKWFSDQKGFGFITP+DGG+DLFV
Sbjct: 2   GERVTGIVKWFSDQKGFGFITPNDGGDDLFV 32



 Score = 24.6 bits (52), Expect(2) = 5e-09
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGPD A V
Sbjct: 64  KAVDVTGPDEAPV 76


>emb|CBI37898.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score = 61.6 bits (148), Expect(2) = 6e-09
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +2

Query: 53  RVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           RV GTVKWF+DQKGFGFITPDDGG+DLFV
Sbjct: 3   RVTGTVKWFNDQKGFGFITPDDGGDDLFV 31



 Score = 25.4 bits (54), Expect(2) = 6e-09
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGPDG  V
Sbjct: 63  KAVDVTGPDGNPV 75


>emb|CAN81359.1| hypothetical protein VITISV_040408 [Vitis vinifera]
          Length = 219

 Score = 61.6 bits (148), Expect(2) = 6e-09
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +2

Query: 53  RVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           RV GTVKWF+DQKGFGFITPDDGG+DLFV
Sbjct: 3   RVTGTVKWFNDQKGFGFITPDDGGDDLFV 31



 Score = 25.4 bits (54), Expect(2) = 6e-09
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGPDG  V
Sbjct: 63  KAVDVTGPDGNPV 75


>ref|XP_002277628.1| PREDICTED: glycine-rich protein 2-like [Vitis vinifera]
          Length = 214

 Score = 61.6 bits (148), Expect(2) = 6e-09
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +2

Query: 53  RVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           RV GTVKWF+DQKGFGFITPDDGG+DLFV
Sbjct: 3   RVTGTVKWFNDQKGFGFITPDDGGDDLFV 31



 Score = 25.4 bits (54), Expect(2) = 6e-09
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGPDG  V
Sbjct: 63  KAVDVTGPDGNPV 75


>gb|ESW08176.1| hypothetical protein PHAVU_009G025100g [Phaseolus vulgaris]
          Length = 194

 Score = 63.5 bits (153), Expect(2) = 6e-09
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 32  MAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           M+E   +R+ G VKWF+DQKGFGFITPDDGGEDLFV
Sbjct: 1   MSESEKQRITGKVKWFNDQKGFGFITPDDGGEDLFV 36



 Score = 23.5 bits (49), Expect(2) = 6e-09
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KAVDVTGPD + V
Sbjct: 68  KAVDVTGPDESPV 80


>ref|NP_179702.1| glycine-rich protein 2B [Arabidopsis thaliana]
           gi|17366505|sp|Q38896.1|CSP4_ARATH RecName: Full=Cold
           shock domain-containing protein 4; Short=AtCSP4;
           AltName: Full=Glycine-rich protein 2b; Short=AtGRP2b
           gi|1063684|gb|AAA91165.1| AtGRP2b [Arabidopsis thaliana]
           gi|4803937|gb|AAD29810.1| glycine-rich protein (AtGRP2)
           [Arabidopsis thaliana] gi|16323178|gb|AAL15323.1|
           At2g21060/F26H11.18 [Arabidopsis thaliana]
           gi|60543359|gb|AAX22277.1| At2g21060 [Arabidopsis
           thaliana] gi|330252023|gb|AEC07117.1| glycine-rich
           protein 2B [Arabidopsis thaliana]
          Length = 201

 Score = 62.4 bits (150), Expect(2) = 8e-09
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +2

Query: 23  GKEMAEEGGERVKGTVKWFSDQKGFGFITPDDGGEDLFV 139
           G ++   GG+R KGTVKWF  QKGFGFITP DGG+DLFV
Sbjct: 4   GGDVNMSGGDRRKGTVKWFDTQKGFGFITPSDGGDDLFV 42



 Score = 24.3 bits (51), Expect(2) = 8e-09
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 177 KAVDVTGPDGAAV 215
           KA++V+GPDGA V
Sbjct: 74  KAIEVSGPDGAPV 86


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