BLASTX nr result

ID: Atropa21_contig00007492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007492
         (461 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAO49709.1| nuclear pore complex protein RAE1a [Nicotiana be...    75   1e-11
gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana] gi|582014375...    75   1e-11
ref|XP_006341821.1| PREDICTED: rae1-like protein At1g80670-like ...    73   3e-11
ref|XP_004248810.1| PREDICTED: rae1-like protein At1g80670-like ...    73   3e-11
ref|NP_001242596.1| uncharacterized protein LOC100780721 [Glycin...    70   4e-10
ref|XP_006465252.1| PREDICTED: rae1-like protein At1g80670-like ...    69   5e-10
ref|XP_006465246.1| PREDICTED: rae1-like protein At1g80670-like ...    69   5e-10
ref|XP_006427570.1| hypothetical protein CICLE_v10026774mg [Citr...    69   5e-10
ref|XP_006427549.1| hypothetical protein CICLE_v10025978mg [Citr...    69   5e-10
gb|ACF74354.1| putative mRNA export protein [Arachis hypogaea]         69   5e-10
ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycin...    69   6e-10
ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative ...    69   8e-10
ref|XP_004496188.1| PREDICTED: rae1-like protein At1g80670-like ...    68   1e-09
ref|XP_006465253.1| PREDICTED: rae1-like protein At1g80670-like ...    67   2e-09
ref|XP_002297802.2| hypothetical protein POPTR_0001s14730g [Popu...    66   4e-09
ref|XP_006368919.1| transducin family protein [Populus trichocar...    66   4e-09
gb|ESW25400.1| hypothetical protein PHAVU_003G032400g [Phaseolus...    66   5e-09
ref|XP_003628901.1| Pre-mRNA-splicing factor prp46 [Medicago tru...    66   5e-09
gb|ESW20425.1| hypothetical protein PHAVU_006G208000g [Phaseolus...    65   7e-09
ref|XP_004300697.1| PREDICTED: rae1-like protein At1g80670-like ...    65   9e-09

>dbj|BAO49709.1| nuclear pore complex protein RAE1a [Nicotiana benthamiana]
          Length = 347

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKSTEVQQPP+DSVSSLCFSPKAN L+ATSWD
Sbjct: 11  NTNPNKSTEVQQPPSDSVSSLCFSPKANFLIATSWD 46


>gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana] gi|582014375|dbj|BAO49710.1|
           nuclear pore complex protein RAE1b [Nicotiana
           benthamiana]
          Length = 347

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKSTEVQQPP+DSVSSLCFSPKAN L+ATSWD
Sbjct: 11  NTNPNKSTEVQQPPSDSVSSLCFSPKANFLIATSWD 46


>ref|XP_006341821.1| PREDICTED: rae1-like protein At1g80670-like [Solanum tuberosum]
          Length = 350

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EVQQPP+DSVSSLCFSPKANLLVA+SWD
Sbjct: 13  NTNPNKSVEVQQPPSDSVSSLCFSPKANLLVASSWD 48


>ref|XP_004248810.1| PREDICTED: rae1-like protein At1g80670-like [Solanum lycopersicum]
          Length = 350

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EVQQPP+DSVSSLCFSPKANLLVA+SWD
Sbjct: 13  NTNPNKSVEVQQPPSDSVSSLCFSPKANLLVASSWD 48


>ref|NP_001242596.1| uncharacterized protein LOC100780721 [Glycine max]
           gi|255641855|gb|ACU21196.1| unknown [Glycine max]
          Length = 347

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EV QPP+DS+SSLCFSPKAN LVATSWD
Sbjct: 9   NTNPNKSYEVAQPPSDSISSLCFSPKANFLVATSWD 44


>ref|XP_006465252.1| PREDICTED: rae1-like protein At1g80670-like isoform X1 [Citrus
           sinensis] gi|568821624|ref|XP_006465254.1| PREDICTED:
           rae1-like protein At1g80670-like isoform X3 [Citrus
           sinensis]
          Length = 350

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           N NPNKS EV QPP+DSVSSLCFSPKAN+LVATSWD
Sbjct: 12  NQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47


>ref|XP_006465246.1| PREDICTED: rae1-like protein At1g80670-like [Citrus sinensis]
          Length = 88

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           N NPNKS EV QPP+DSVSSLCFSPKAN+LVATSWD
Sbjct: 12  NQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47


>ref|XP_006427570.1| hypothetical protein CICLE_v10026774mg [Citrus clementina]
           gi|557529560|gb|ESR40810.1| hypothetical protein
           CICLE_v10026774mg [Citrus clementina]
          Length = 124

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           N NPNKS EV QPP+DSVSSLCFSPKAN+LVATSWD
Sbjct: 12  NQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47


>ref|XP_006427549.1| hypothetical protein CICLE_v10025978mg [Citrus clementina]
           gi|557529539|gb|ESR40789.1| hypothetical protein
           CICLE_v10025978mg [Citrus clementina]
          Length = 350

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           N NPNKS EV QPP+DSVSSLCFSPKAN+LVATSWD
Sbjct: 12  NQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47


>gb|ACF74354.1| putative mRNA export protein [Arachis hypogaea]
          Length = 179

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EV QPP DS+SSLCFSPKAN LVATSWD
Sbjct: 8   NTNPNKSYEVTQPPGDSISSLCFSPKANFLVATSWD 43


>ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycine max]
           gi|255638763|gb|ACU19686.1| unknown [Glycine max]
          Length = 347

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EV QPP+DS+SS+CFSPKAN LVATSWD
Sbjct: 9   NTNPNKSYEVAQPPSDSISSICFSPKANFLVATSWD 44


>ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative [Ricinus communis]
           gi|223533320|gb|EEF35072.1| plant poly(A)+ RNA export
           protein, putative [Ricinus communis]
          Length = 349

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           N NPNKS EV QPP+DSVSSLCFSPKAN LVATSWD
Sbjct: 11  NQNPNKSIEVSQPPSDSVSSLCFSPKANFLVATSWD 46


>ref|XP_004496188.1| PREDICTED: rae1-like protein At1g80670-like [Cicer arietinum]
          Length = 346

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EV QPP+DS+SSLCFSPKAN L+A+SWD
Sbjct: 8   NTNPNKSYEVSQPPSDSISSLCFSPKANFLIASSWD 43


>ref|XP_006465253.1| PREDICTED: rae1-like protein At1g80670-like isoform X2 [Citrus
           sinensis]
          Length = 350

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           N NPN S EV QPP+DSVSSLCFSPKAN+LVATSWD
Sbjct: 12  NQNPNNSIEVSQPPSDSVSSLCFSPKANILVATSWD 47


>ref|XP_002297802.2| hypothetical protein POPTR_0001s14730g [Populus trichocarpa]
           gi|550347270|gb|EEE82607.2| hypothetical protein
           POPTR_0001s14730g [Populus trichocarpa]
          Length = 371

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EV QPP+DSVSSL FSPKAN LVATSWD
Sbjct: 11  NTNPNKSIEVLQPPSDSVSSLSFSPKANFLVATSWD 46


>ref|XP_006368919.1| transducin family protein [Populus trichocarpa]
           gi|550347269|gb|ERP65488.1| transducin family protein
           [Populus trichocarpa]
          Length = 349

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EV QPP+DSVSSL FSPKAN LVATSWD
Sbjct: 11  NTNPNKSIEVLQPPSDSVSSLSFSPKANFLVATSWD 46


>gb|ESW25400.1| hypothetical protein PHAVU_003G032400g [Phaseolus vulgaris]
          Length = 346

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EV QPP+DS+SSL FSPKAN LVATSWD
Sbjct: 8   NTNPNKSFEVAQPPSDSISSLSFSPKANFLVATSWD 43


>ref|XP_003628901.1| Pre-mRNA-splicing factor prp46 [Medicago truncatula]
           gi|355522923|gb|AET03377.1| Pre-mRNA-splicing factor
           prp46 [Medicago truncatula]
          Length = 400

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/36 (83%), Positives = 31/36 (86%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           NTNPNKS EV QPP DS+SSL FSPKAN LVATSWD
Sbjct: 10  NTNPNKSYEVSQPPTDSISSLSFSPKANFLVATSWD 45


>gb|ESW20425.1| hypothetical protein PHAVU_006G208000g [Phaseolus vulgaris]
          Length = 347

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 31/36 (86%), Positives = 31/36 (86%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           N NPNKS EV QPP DSVSSL FSPKANLLVATSWD
Sbjct: 9   NPNPNKSFEVNQPPTDSVSSLSFSPKANLLVATSWD 44


>ref|XP_004300697.1| PREDICTED: rae1-like protein At1g80670-like [Fragaria vesca subsp.
           vesca]
          Length = 348

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/36 (86%), Positives = 31/36 (86%)
 Frame = +1

Query: 352 NTNPNKSTEVQQPPADSVSSLCFSPKANLLVATSWD 459
           N NPNKS EV QPP DSVSSL FSPKANLLVATSWD
Sbjct: 9   NPNPNKSFEVAQPPTDSVSSLSFSPKANLLVATSWD 44


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