BLASTX nr result

ID: Atropa21_contig00007455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007455
         (661 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004240057.1| PREDICTED: protein transport protein Sec61 s...   117   3e-24
ref|XP_004240056.1| PREDICTED: protein transport protein Sec61 s...   115   9e-24
ref|XP_004133771.1| PREDICTED: protein transport protein Sec61 s...   107   2e-21
ref|XP_004504530.1| PREDICTED: protein transport protein Sec61 s...   107   3e-21
ref|XP_004488016.1| PREDICTED: protein transport protein Sec61 s...   107   4e-21
gb|AFK44320.1| unknown [Lotus japonicus]                              104   2e-20
gb|AFK48843.1| unknown [Lotus japonicus]                              103   6e-20
gb|AFK37136.1| unknown [Lotus japonicus]                              102   8e-20
gb|ESW06717.1| hypothetical protein PHAVU_010G070500g [Phaseolus...   100   5e-19
gb|ESW05308.1| hypothetical protein PHAVU_011G169200g [Phaseolus...   100   5e-19
ref|XP_004504298.1| PREDICTED: protein transport protein Sec61 s...   100   5e-19
ref|XP_003517012.1| PREDICTED: protein transport protein Sec61 s...   100   7e-19
ref|XP_002302515.1| sec61beta family protein [Populus trichocarp...    99   1e-18
gb|EXB37573.1| hypothetical protein L484_021777 [Morus notabilis]      98   3e-18
ref|NP_191613.1| Preprotein translocase Sec, Sec61-beta subunit ...    98   3e-18
gb|EMJ21701.1| hypothetical protein PRUPE_ppa014159mg [Prunus pe...    97   4e-18
dbj|BAC42429.1| putative transport protein subunit [Arabidopsis ...    97   6e-18
gb|ABK92542.1| unknown [Populus trichocarpa]                           96   7e-18
gb|EOY04701.1| Preprotein translocase Sec [Theobroma cacao]            95   2e-17
ref|XP_004306962.1| PREDICTED: protein transport protein Sec61 s...    94   4e-17

>ref|XP_004240057.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Solanum lycopersicum] gi|565357382|ref|XP_006345523.1|
           PREDICTED: protein transport protein Sec61 subunit
           beta-like [Solanum tuberosum]
           gi|565357384|ref|XP_006345524.1| PREDICTED: protein
           transport protein Sec61 subunit beta-like [Solanum
           tuberosum]
          Length = 84

 Score =  117 bits (293), Expect = 3e-24
 Identities = 61/83 (73%), Positives = 62/83 (74%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGGGGPQRGT       LRRRK              MLQFYTDDSPGLKISPNVVLVM
Sbjct: 1   MALGGGGPQRGTAAAAAANLRRRKTGGAGGAAGGAGGTMLQFYTDDSPGLKISPNVVLVM 60

Query: 242 SIGFIAFVAVLHVMGKLYFVRRE 310
           SIGFIAFVA+LHVMGKLYFVRRE
Sbjct: 61  SIGFIAFVAILHVMGKLYFVRRE 83


>ref|XP_004240056.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Solanum lycopersicum]
          Length = 84

 Score =  115 bits (289), Expect = 9e-24
 Identities = 60/83 (72%), Positives = 61/83 (73%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGGGGPQRGT       LRRRK              MLQFYTDDSPGLKISPNVVLVM
Sbjct: 1   MALGGGGPQRGTAAAAAANLRRRKTGGAGGAAGGAGGTMLQFYTDDSPGLKISPNVVLVM 60

Query: 242 SIGFIAFVAVLHVMGKLYFVRRE 310
           SIGFI FVA+LHVMGKLYFVRRE
Sbjct: 61  SIGFIGFVAILHVMGKLYFVRRE 83


>ref|XP_004133771.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           isoform 1 [Cucumis sativus]
           gi|449431968|ref|XP_004133772.1| PREDICTED: protein
           transport protein Sec61 subunit beta-like isoform 2
           [Cucumis sativus] gi|449431970|ref|XP_004133773.1|
           PREDICTED: protein transport protein Sec61 subunit
           beta-like isoform 3 [Cucumis sativus]
          Length = 82

 Score =  107 bits (268), Expect = 2e-21
 Identities = 59/84 (70%), Positives = 61/84 (72%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGGGGPQRG+        RRR               MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGT--MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVAVLHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAVLHVMGKLYFVRREA 82


>ref|XP_004504530.1| PREDICTED: protein transport protein Sec61 subunit beta-like [Cicer
           arietinum]
          Length = 82

 Score =  107 bits (267), Expect = 3e-21
 Identities = 60/84 (71%), Positives = 63/84 (75%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGGGGPQRG+       +RRRK              MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGGGPQRGSAAATAS-MRRRKTAGGGASGGAAGT-MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVAVLHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAVLHVMGKLYFVRREA 82


>ref|XP_004488016.1| PREDICTED: protein transport protein Sec61 subunit beta-like [Cicer
           arietinum]
          Length = 82

 Score =  107 bits (266), Expect = 4e-21
 Identities = 59/84 (70%), Positives = 63/84 (75%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGGGGPQRG+       +RRRK              MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGGGPQRGSAAATAS-MRRRKTAGGGASGGAAGT-MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVA+LHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAILHVMGKLYFVRREA 82


>gb|AFK44320.1| unknown [Lotus japonicus]
          Length = 82

 Score =  104 bits (260), Expect = 2e-20
 Identities = 58/84 (69%), Positives = 62/84 (73%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGGG PQRG+       +RRRK              MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGGNPQRGSAAATAS-MRRRKPAGGAAAGGAAGN-MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVA+LHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAILHVMGKLYFVRREA 82


>gb|AFK48843.1| unknown [Lotus japonicus]
          Length = 82

 Score =  103 bits (256), Expect = 6e-20
 Identities = 57/84 (67%), Positives = 59/84 (70%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGG  PQRG+        RRR               MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGAAPQRGSAAAAASMRRRRTTSGGASGGAAGT--MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVAVLHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAVLHVMGKLYFVRREA 82


>gb|AFK37136.1| unknown [Lotus japonicus]
          Length = 82

 Score =  102 bits (255), Expect = 8e-20
 Identities = 57/84 (67%), Positives = 61/84 (72%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGGG PQRG+       +RRRK              MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGGNPQRGSAAATAS-MRRRKPAGGAAAGGAAGN-MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           S GFIAFVA+LHVMGKLYFVRREA
Sbjct: 59  STGFIAFVAILHVMGKLYFVRREA 82


>gb|ESW06717.1| hypothetical protein PHAVU_010G070500g [Phaseolus vulgaris]
          Length = 82

 Score =  100 bits (248), Expect = 5e-19
 Identities = 56/84 (66%), Positives = 58/84 (69%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGG  P RG+        RRR               MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGTAPPRGSAAATANMRRRRTTSGGASGGAAGN--MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVAVLHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAVLHVMGKLYFVRREA 82


>gb|ESW05308.1| hypothetical protein PHAVU_011G169200g [Phaseolus vulgaris]
          Length = 82

 Score =  100 bits (248), Expect = 5e-19
 Identities = 56/84 (66%), Positives = 58/84 (69%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGG  P RG+        RRR               MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGTAPPRGSAAATANMRRRRTTGGGASGGAAGT--MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVAVLHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAVLHVMGKLYFVRREA 82


>ref|XP_004504298.1| PREDICTED: protein transport protein Sec61 subunit beta-like [Cicer
           arietinum]
          Length = 82

 Score =  100 bits (248), Expect = 5e-19
 Identities = 56/84 (66%), Positives = 60/84 (71%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MA GG  PQRG+       +RRRK              MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MASGGAAPQRGSAAATAS-MRRRKTAGGGASGGAAGT-MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVA+LHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAILHVMGKLYFVRREA 82


>ref|XP_003517012.1| PREDICTED: protein transport protein Sec61 subunit beta [Glycine
           max] gi|356506563|ref|XP_003522049.1| PREDICTED: protein
           transport protein Sec61 subunit beta-like [Glycine max]
           gi|255630067|gb|ACU15387.1| unknown [Glycine max]
          Length = 82

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 55/84 (65%), Positives = 58/84 (69%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MALGG  P RG+        RRR               MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MALGGTAPPRGSAAATASMRRRRTTGGAASGGAAGT--MLQFYTDDAPGLKISPNVVLVM 58

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVA+LHVMGKLYFVRREA
Sbjct: 59  SIGFIAFVAILHVMGKLYFVRREA 82


>ref|XP_002302515.1| sec61beta family protein [Populus trichocarpa]
           gi|566158011|ref|XP_006386558.1| hypothetical protein
           POPTR_0002s14410g [Populus trichocarpa]
           gi|118481855|gb|ABK92864.1| unknown [Populus
           trichocarpa] gi|222844241|gb|EEE81788.1| sec61beta
           family protein [Populus trichocarpa]
           gi|550345009|gb|ERP64355.1| hypothetical protein
           POPTR_0002s14410g [Populus trichocarpa]
          Length = 84

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 52/84 (61%), Positives = 57/84 (67%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MA+GG  P RG+        RRR               MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MAVGGTAPPRGSAAAAASMRRRRTVSGGASGGAGAAGTMLQFYTDDAPGLKISPNVVLVM 60

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVA+LHV+GKLY VRREA
Sbjct: 61  SIGFIAFVAILHVVGKLYLVRREA 84


>gb|EXB37573.1| hypothetical protein L484_021777 [Morus notabilis]
          Length = 592

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 52/85 (61%), Positives = 58/85 (68%)
 Frame = +2

Query: 59  EMALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLV 238
           +M LGG  P RG+        RRR               MLQFYTDD+PGLKISPNVVL+
Sbjct: 510 KMVLGGAAPPRGSAAATASMRRRRTTSSGASGGAAGT--MLQFYTDDAPGLKISPNVVLI 567

Query: 239 MSIGFIAFVAVLHVMGKLYFVRREA 313
           MSIGFIAFVA+LHVMGKLYFVRRE+
Sbjct: 568 MSIGFIAFVAILHVMGKLYFVRRES 592


>ref|NP_191613.1| Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis
           thaliana] gi|42572743|ref|NP_974467.1| Preprotein
           translocase Sec, Sec61-beta subunit protein [Arabidopsis
           thaliana] gi|7288002|emb|CAB81840.1| transport protein
           subunit-like [Arabidopsis thaliana]
           gi|332646555|gb|AEE80076.1| Preprotein translocase Sec,
           Sec61-beta subunit protein [Arabidopsis thaliana]
           gi|332646556|gb|AEE80077.1| Preprotein translocase Sec,
           Sec61-beta subunit protein [Arabidopsis thaliana]
          Length = 81

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 51/79 (64%), Positives = 57/79 (72%)
 Frame = +2

Query: 68  LGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVMSI 247
           +GGG PQRG+       +RRRK              MLQFYTDD+PGLKISPNVVL+MSI
Sbjct: 2   VGGGAPQRGSAAATAS-MRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSI 60

Query: 248 GFIAFVAVLHVMGKLYFVR 304
           GFIAFVAVLHVMGKLYFV+
Sbjct: 61  GFIAFVAVLHVMGKLYFVK 79


>gb|EMJ21701.1| hypothetical protein PRUPE_ppa014159mg [Prunus persica]
          Length = 83

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 53/84 (63%), Positives = 57/84 (67%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           M LGGG P           +RRR+              MLQFYTDD+PGLKISPNVVL+M
Sbjct: 1   MVLGGGAPAPRGSAAATASMRRRRTTSGGASGGAAGT-MLQFYTDDAPGLKISPNVVLIM 59

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SIGFIAFVAVLHVMGKLYFVRREA
Sbjct: 60  SIGFIAFVAVLHVMGKLYFVRREA 83


>dbj|BAC42429.1| putative transport protein subunit [Arabidopsis thaliana]
          Length = 81

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 50/79 (63%), Positives = 57/79 (72%)
 Frame = +2

Query: 68  LGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVMSI 247
           +GGG PQRG+       +R+RK              MLQFYTDD+PGLKISPNVVL+MSI
Sbjct: 2   VGGGAPQRGSAAATAS-MRKRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSI 60

Query: 248 GFIAFVAVLHVMGKLYFVR 304
           GFIAFVAVLHVMGKLYFV+
Sbjct: 61  GFIAFVAVLHVMGKLYFVK 79


>gb|ABK92542.1| unknown [Populus trichocarpa]
          Length = 84

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 51/84 (60%), Positives = 56/84 (66%)
 Frame = +2

Query: 62  MALGGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVM 241
           MA+GG  P RG+        RRR               MLQFYTDD+PGLKISPNVVLVM
Sbjct: 1   MAVGGTAPPRGSAAAAASMRRRRTVSGGASGGAGAAGTMLQFYTDDAPGLKISPNVVLVM 60

Query: 242 SIGFIAFVAVLHVMGKLYFVRREA 313
           SI FIAFVA+LHV+GKLY VRREA
Sbjct: 61  SIDFIAFVAILHVVGKLYLVRREA 84


>gb|EOY04701.1| Preprotein translocase Sec [Theobroma cacao]
          Length = 81

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 52/81 (64%), Positives = 55/81 (67%)
 Frame = +2

Query: 71  GGGGPQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLVMSIG 250
           GG  P RG+        RRR               MLQFYTDD+PGLKISPNVVLVMSIG
Sbjct: 3   GGTAPPRGSAAAVASLRRRRSTSGAASGGAAGT--MLQFYTDDAPGLKISPNVVLVMSIG 60

Query: 251 FIAFVAVLHVMGKLYFVRREA 313
           FIAFVA+LHVMGKLYFVRREA
Sbjct: 61  FIAFVAILHVMGKLYFVRREA 81


>ref|XP_004306962.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Fragaria vesca subsp. vesca]
          Length = 83

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 51/82 (62%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +2

Query: 62  MALGGGG-PQRGTXXXXXXXLRRRKXXXXXXXXXXXXXXMLQFYTDDSPGLKISPNVVLV 238
           M LGGG  P RG+        RRR               MLQFYTDD+PGLKISPNVVL+
Sbjct: 1   MVLGGGAAPPRGSAAATASMRRRRTTTSGGGASGGAAGTMLQFYTDDAPGLKISPNVVLI 60

Query: 239 MSIGFIAFVAVLHVMGKLYFVR 304
           MSIGFI FVAVLHVMGKLYFVR
Sbjct: 61  MSIGFIGFVAVLHVMGKLYFVR 82


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