BLASTX nr result
ID: Atropa21_contig00007306
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00007306
(557 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341056.1| PREDICTED: pentatricopeptide repeat-containi... 169 4e-40
ref|XP_004246460.1| PREDICTED: pentatricopeptide repeat-containi... 165 8e-39
gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus pe... 110 2e-22
ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citr... 99 7e-19
gb|EPS67278.1| hypothetical protein M569_07494 [Genlisea aurea] 99 7e-19
gb|EOY07590.1| Pentatricopeptide repeat (PPR) superfamily protei... 98 2e-18
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocar... 94 3e-17
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,... 92 6e-17
ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
gb|EXC31687.1| hypothetical protein L484_008777 [Morus notabilis] 89 9e-16
ref|XP_002305565.1| hypothetical protein POPTR_0004s01330g [Popu... 80 3e-13
ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containi... 77 4e-12
ref|NP_190938.1| protein MATERNAL EFFECT EMBRYO ARREST 40 [Arabi... 72 7e-11
gb|ESW16450.1| hypothetical protein PHAVU_007G157700g [Phaseolus... 71 2e-10
ref|XP_006292855.1| hypothetical protein CARUB_v10019115mg [Caps... 70 3e-10
ref|XP_006403663.1| hypothetical protein EUTSA_v10010142mg [Eutr... 69 8e-10
ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arab... 69 8e-10
ref|XP_006846078.1| hypothetical protein AMTR_s00012p00087690 [A... 57 3e-06
>ref|XP_006341056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Solanum tuberosum]
Length = 766
Score = 169 bits (428), Expect = 4e-40
Identities = 87/134 (64%), Positives = 95/134 (70%)
Frame = -1
Query: 404 SMXSFLKCHPWTTHSQNXXXXXXXXXXXXXXXXXSTHQERVFTVSSAILPSKAKELLPEF 225
S SFLKCHPWT R VSS +LPSKAKELL +F
Sbjct: 4 SFSSFLKCHPWTQSQNPPNPFSFPPPFHPPKPISLPFSSRHERVSSTVLPSKAKELLQDF 63
Query: 224 TPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVLND 45
TPKQ LDTLR ENDE SAF+LF+WA+KQPHFTPTLSIYEEILRKLGNVGSFDLM+ VL+D
Sbjct: 64 TPKQFLDTLRQENDETSAFHLFKWASKQPHFTPTLSIYEEILRKLGNVGSFDLMKGVLDD 123
Query: 44 MKKLKVELVEGTFF 3
MK+ KVELVEGTFF
Sbjct: 124 MKRQKVELVEGTFF 137
>ref|XP_004246460.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Solanum lycopersicum]
Length = 766
Score = 165 bits (417), Expect = 8e-39
Identities = 86/134 (64%), Positives = 93/134 (69%)
Frame = -1
Query: 404 SMXSFLKCHPWTTHSQNXXXXXXXXXXXXXXXXXSTHQERVFTVSSAILPSKAKELLPEF 225
S SFLKCHPW R VSS +LPSKAKELL +F
Sbjct: 4 SFSSFLKCHPWIQSQNPPNPFSFPPPFHPPKPISLPFSSRHEHVSSTVLPSKAKELLQDF 63
Query: 224 TPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVLND 45
TPKQ LDTLR ENDE SAF+LFEWA+KQPHFT TLSIYEEILRKLGNVG FDLM+ VL+D
Sbjct: 64 TPKQFLDTLRQENDETSAFHLFEWASKQPHFTTTLSIYEEILRKLGNVGFFDLMKGVLDD 123
Query: 44 MKKLKVELVEGTFF 3
MK+LKVELVEGTFF
Sbjct: 124 MKRLKVELVEGTFF 137
>gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus persica]
Length = 772
Score = 110 bits (275), Expect = 2e-22
Identities = 59/135 (43%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Frame = -1
Query: 389 LKCHPWT-----THSQNXXXXXXXXXXXXXXXXXSTHQERVFTVSSAIL--PSKAKELLP 231
LKC+PW+ T + H +++ T SS P L P
Sbjct: 7 LKCYPWSFTQSITQTPPPPPSSSHKLFTSLSFPLLHHHDQLVTHSSLSYSTPVSTHHLPP 66
Query: 230 EFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVL 51
+FTP+QLLDTLR +NDE+SA LF+WA+KQP+FTP +IYEE+LRKLG VGSF+ MR +L
Sbjct: 67 DFTPQQLLDTLRRQNDESSALRLFDWASKQPNFTPNSTIYEEVLRKLGKVGSFESMRNIL 126
Query: 50 NDMKKLKVELVEGTF 6
++MK ++ GTF
Sbjct: 127 DEMKLAGCQISSGTF 141
>ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citrus clementina]
gi|568854342|ref|XP_006480788.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Citrus sinensis]
gi|557531109|gb|ESR42292.1| hypothetical protein
CICLE_v10013605mg [Citrus clementina]
Length = 768
Score = 99.0 bits (245), Expect = 7e-19
Identities = 55/133 (41%), Positives = 73/133 (54%)
Frame = -1
Query: 404 SMXSFLKCHPWTTHSQNXXXXXXXXXXXXXXXXXSTHQERVFTVSSAILPSKAKELLPEF 225
S+ S LK HPW Q+ H + T S+ + +++L F
Sbjct: 2 SLSSCLKSHPWPLPRQSLLPLSSKPTTISFASTQH-HDHQQLTSLSSSSSTFSRQLPSNF 60
Query: 224 TPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVLND 45
T QLLD LR + DE+SA LF WA+KQP+F P S+YEE+L KLG VG+FD MRR+L D
Sbjct: 61 TSTQLLDALRRQRDESSALRLFTWASKQPNFAPNSSLYEELLTKLGKVGAFDSMRRILED 120
Query: 44 MKKLKVELVEGTF 6
MK ++ GTF
Sbjct: 121 MKLSGCQIRTGTF 133
>gb|EPS67278.1| hypothetical protein M569_07494 [Genlisea aurea]
Length = 771
Score = 99.0 bits (245), Expect = 7e-19
Identities = 60/142 (42%), Positives = 80/142 (56%), Gaps = 9/142 (6%)
Frame = -1
Query: 404 SMXSFLKCHPWTTHSQNXXXXXXXXXXXXXXXXXSTH--------QERVFTVSSAILPSK 249
++ S LKCHP T + N S + E +S AI +
Sbjct: 2 ALSSCLKCHPSTFNCSNSLFLSNPKLKPATNANSSPYARKKKKKKDENPGAMSFAISTGR 61
Query: 248 AK-ELLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSF 72
+ L P+FT QLL+TLR + D +SAF LF WA KQP+F PT I EE+L KLGNVGSF
Sbjct: 62 STVTLSPDFTTDQLLNTLRSQEDGSSAFQLFRWALKQPNFVPTSPILEELLYKLGNVGSF 121
Query: 71 DLMRRVLNDMKKLKVELVEGTF 6
DL++ VL+++K+ VE+VE TF
Sbjct: 122 DLIKHVLDEVKRCGVEMVERTF 143
>gb|EOY07590.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 752
Score = 97.8 bits (242), Expect = 2e-18
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = -1
Query: 227 FTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVLN 48
FTP QLLDTLR +NDE+SA LF+WA+KQP+FTP LSIYEE+L +LG GSFD M+ +L
Sbjct: 48 FTPTQLLDTLRRQNDESSALRLFDWASKQPNFTPNLSIYEELLTRLGKHGSFDSMKHILQ 107
Query: 47 DMKKLKVELVEGTF 6
MK EL GTF
Sbjct: 108 QMKLSGCELRRGTF 121
>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/96 (51%), Positives = 63/96 (65%)
Frame = -1
Query: 293 QERVFTVSSAILPSKAKELLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSI 114
Q+ V S + PS +L FTPKQL D LR ++DE+S +L +WA+KQP+F P+ I
Sbjct: 48 QQAVSPSFSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVI 107
Query: 113 YEEILRKLGNVGSFDLMRRVLNDMKKLKVELVEGTF 6
YEE+LRKLG GSF MRRVL +MK E+ GTF
Sbjct: 108 YEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTF 143
>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 95.1 bits (235), Expect = 1e-17
Identities = 45/78 (57%), Positives = 57/78 (73%)
Frame = -1
Query: 239 LLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMR 60
L P+FTPKQL++TLR + DE +A +F WA+KQP+F P+ S+YEEILRKLG GSF+ MR
Sbjct: 58 LPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMR 117
Query: 59 RVLNDMKKLKVELVEGTF 6
RVL +MK E G F
Sbjct: 118 RVLEEMKLSGCEFDRGIF 135
>gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocarpus longan]
Length = 763
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = -1
Query: 242 ELLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLM 63
+L P FT Q LDT+R ++DE SA LF WA+KQP++TPTLS+YEE+L KLG VGSFD M
Sbjct: 54 QLPPNFTSSQHLDTIRRQHDETSALRLFSWASKQPNYTPTLSVYEELLAKLGKVGSFDSM 113
Query: 62 RRVLNDMKKLKVELVEGTF 6
+L ++K ++ GTF
Sbjct: 114 TEILQEIKAAGCQINRGTF 132
>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 630
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = -1
Query: 278 TVSSAILPSKAKELLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEIL 99
T+S A L FTP QLLDTLR +NDE +A L WA+KQP+F P SIYEEIL
Sbjct: 35 TLSFASTQQHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEIL 94
Query: 98 RKLGNVGSFDLMRRVLNDMKKLKVELVEG 12
RKLG VGSF+ M+ +L +MK L ++ G
Sbjct: 95 RKLGKVGSFNSMKDILQEMKGLDCQIDRG 123
>ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 761
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/78 (55%), Positives = 60/78 (76%)
Frame = -1
Query: 275 VSSAILPSKAKELLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILR 96
V S++ S L +FTP+QLLD+LR +NDE+SA LF+WA+KQP F+P+ ++YEE+L
Sbjct: 41 VHSSLSYSTTHPLPHDFTPQQLLDSLRRQNDESSALRLFDWASKQPSFSPSSAVYEEVLT 100
Query: 95 KLGNVGSFDLMRRVLNDM 42
KLG VGSF+ MR VL++M
Sbjct: 101 KLGKVGSFESMRDVLDEM 118
>gb|EXC31687.1| hypothetical protein L484_008777 [Morus notabilis]
Length = 781
Score = 88.6 bits (218), Expect = 9e-16
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = -1
Query: 281 FTVSSAILPSKAKELLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEI 102
F++ S+ S L P+FT QLLD +R +NDE+SA LFEWA+ QP+F+P+ +Y EI
Sbjct: 52 FSIQSSSSTSPTPLLPPDFTSNQLLDAVRRQNDESSALRLFEWASNQPNFSPSPLLYNEI 111
Query: 101 LRKLGNVGSFDLMRRVLNDMKK 36
L KL VGSF+ M+ +LNDMKK
Sbjct: 112 LGKLAAVGSFESMKTLLNDMKK 133
>ref|XP_002305565.1| hypothetical protein POPTR_0004s01330g [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| hypothetical protein
POPTR_0004s01330g [Populus trichocarpa]
Length = 757
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = -1
Query: 254 SKAKELLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGS 75
+ A L P FTP QLL +LR E D ++ +LF WA+KQP+F P+ SI++E+L KLG G
Sbjct: 45 NSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGE 104
Query: 74 FDLMRRVLNDMK 39
FD M+ +L +MK
Sbjct: 105 FDAMKDILKEMK 116
>ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 76.6 bits (187), Expect = 4e-12
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = -1
Query: 281 FTVSSAILPSKAKE---LLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIY 111
F+ SSA+ S + L P+F+P QLLD LR + D +SA +LF+WA+ QP+++ S++
Sbjct: 36 FSSSSALSSSTSATHHPLPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVF 95
Query: 110 EEILRKLGNVGSFDLMRRVLNDMKKLKVELVEGTF 6
E+LR+L GSFD M +L M K+ + E TF
Sbjct: 96 HELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTF 130
>ref|NP_190938.1| protein MATERNAL EFFECT EMBRYO ARREST 40 [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis
thaliana] gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400
[Arabidopsis thaliana] gi|332645608|gb|AEE79129.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 754
Score = 72.4 bits (176), Expect = 7e-11
Identities = 34/73 (46%), Positives = 52/73 (71%)
Frame = -1
Query: 224 TPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVLND 45
T +LLD+LR + D+++A LF A+K+P+F+P ++YEEIL +LG GSFD M+++L D
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILED 108
Query: 44 MKKLKVELVEGTF 6
MK + E+ TF
Sbjct: 109 MKSSRCEMGTSTF 121
>gb|ESW16450.1| hypothetical protein PHAVU_007G157700g [Phaseolus vulgaris]
Length = 755
Score = 71.2 bits (173), Expect = 2e-10
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = -1
Query: 281 FTVSSAILPSKAKELLP---EFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIY 111
F SSA+ S + P +F+P QLLD LR + DE+SA LF+WA+ QP+++ SI+
Sbjct: 36 FRFSSALSSSTSATHHPLPHDFSPSQLLDLLRRQPDESSALRLFQWASAQPNYSAHPSIF 95
Query: 110 EEILRKLGNVGSFDLMRRVLNDMKKLKVELVEGTF 6
E+L +LG VGS D M +L+ M+ + E TF
Sbjct: 96 HELLGQLGRVGSVDSMLSLLHQMQSSACPVDESTF 130
>ref|XP_006292855.1| hypothetical protein CARUB_v10019115mg [Capsella rubella]
gi|482561562|gb|EOA25753.1| hypothetical protein
CARUB_v10019115mg [Capsella rubella]
Length = 754
Score = 70.5 bits (171), Expect = 3e-10
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = -1
Query: 215 QLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVLNDMKK 36
+LLD+LR + D+++A LF+ A+KQP+F P ++YEEIL +LG GSFD MR +L DMK
Sbjct: 52 KLLDSLRSQPDDSAALRLFKLASKQPNFAPEPALYEEILHRLGRSGSFDDMREILGDMKS 111
Query: 35 LKVELVEGTF 6
E+ F
Sbjct: 112 SGCEMGTSPF 121
>ref|XP_006403663.1| hypothetical protein EUTSA_v10010142mg [Eutrema salsugineum]
gi|557104782|gb|ESQ45116.1| hypothetical protein
EUTSA_v10010142mg [Eutrema salsugineum]
Length = 754
Score = 68.9 bits (167), Expect = 8e-10
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = -1
Query: 215 QLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVLNDMKK 36
+LLD+LR + D ++A LF A+KQP+F+P ++YEEIL +LG GSFD MR+ L DMK
Sbjct: 52 KLLDSLRSQPDNSAALRLFNLASKQPNFSPDPALYEEILLRLGRSGSFDEMRKFLKDMKN 111
Query: 35 LKVELVEGTF 6
E+ F
Sbjct: 112 SACEMGTSPF 121
>ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata] gi|297322059|gb|EFH52480.1| hypothetical protein
ARALYDRAFT_906766 [Arabidopsis lyrata subsp. lyrata]
Length = 754
Score = 68.9 bits (167), Expect = 8e-10
Identities = 33/70 (47%), Positives = 49/70 (70%)
Frame = -1
Query: 215 QLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKLGNVGSFDLMRRVLNDMKK 36
+LLD+LR + D+++A LF A+K+P+F+P ++YEEIL +LG GSFD MR++L DMK
Sbjct: 52 KLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKN 111
Query: 35 LKVELVEGTF 6
E+ F
Sbjct: 112 SGCEMGTSPF 121
>ref|XP_006846078.1| hypothetical protein AMTR_s00012p00087690 [Amborella trichopoda]
gi|548848848|gb|ERN07753.1| hypothetical protein
AMTR_s00012p00087690 [Amborella trichopoda]
Length = 805
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/79 (34%), Positives = 46/79 (58%)
Frame = -1
Query: 269 SAILPSKAKELLPEFTPKQLLDTLRCENDENSAFNLFEWATKQPHFTPTLSIYEEILRKL 90
+++ PS ++ P+FT + LL L + D + +F +A+K P F SIYE +L+ L
Sbjct: 92 NSLSPSSIHQIPPDFTTEDLLSILNRQKDAEATLQIFNFASKHPSFITEPSIYEAVLKSL 151
Query: 89 GNVGSFDLMRRVLNDMKKL 33
G+F ++ +LN+MK L
Sbjct: 152 ATEGAFCHVQTLLNEMKGL 170