BLASTX nr result

ID: Atropa21_contig00007284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007284
         (671 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348833.1| PREDICTED: uncharacterized serine-rich prote...    57   7e-26
ref|XP_004243389.1| PREDICTED: uncharacterized protein LOC101255...    54   4e-18

>ref|XP_006348833.1| PREDICTED: uncharacterized serine-rich protein C215.13-like isoform
           X1 [Solanum tuberosum] gi|565364240|ref|XP_006348834.1|
           PREDICTED: uncharacterized serine-rich protein
           C215.13-like isoform X2 [Solanum tuberosum]
          Length = 416

 Score = 57.0 bits (136), Expect(3) = 7e-26
 Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = +2

Query: 8   FINLHECYESSKNRHQHSEF---LHLIPQPAVADEYSNPSSSFKDEAEQSIRAGQNDTLM 178
           F +L    +S++NRHQHS           P +A E SNPS++FKDE      AGQNDTLM
Sbjct: 221 FNSLTSTNKSNENRHQHSHLGTTSSSSRHPTLAYESSNPSTAFKDE------AGQNDTLM 274

Query: 179 CASEFNTSFAAKKPSAFKVDA 241
           C S        KKPSAFK  A
Sbjct: 275 CVS--------KKPSAFKAAA 287



 Score = 57.0 bits (136), Expect(3) = 7e-26
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +1

Query: 244 SRLDMLLDSVTEIENFESSNVID*SIRPYPVTQAG 348
           + LDMLLDSVTEIE  ES+NVID SIRPYPVTQAG
Sbjct: 290 AELDMLLDSVTEIEICESTNVIDQSIRPYPVTQAG 324



 Score = 50.1 bits (118), Expect(3) = 7e-26
 Identities = 29/53 (54%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +3

Query: 399 QPKRVHDL-DKLAIXXXXXXXXXXXXXKETSTVTNKNERSPPNEVNSTAGHTP 554
           QP+R HDL    AI             KETSTVTNKNE S P EV+S AGHTP
Sbjct: 342 QPRRGHDLLPTPAISDISLDDTLDDLLKETSTVTNKNEHSLPTEVSSIAGHTP 394


>ref|XP_004243389.1| PREDICTED: uncharacterized protein LOC101255214 [Solanum
           lycopersicum]
          Length = 399

 Score = 53.9 bits (128), Expect(3) = 4e-18
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +1

Query: 244 SRLDMLLDSVTEIENFESSNVID*SIRPYPVTQAG 348
           + LDMLLDSVTEIE  ES+NVID SIRP+P TQAG
Sbjct: 290 AELDMLLDSVTEIEICESTNVIDQSIRPFPATQAG 324



 Score = 53.1 bits (126), Expect(3) = 4e-18
 Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +2

Query: 32  ESSKNRHQHSEF---LHLIPQPAVADEYSNPSSSFKDEAEQSIRAGQNDTLMCASEFNTS 202
           +S++NRHQ S      +    P +ADE SNPS++ KDE      AGQNDTLMC S     
Sbjct: 229 KSNENRHQDSHLGTTSNNSRHPTLADESSNPSTASKDE------AGQNDTLMCVS----- 277

Query: 203 FAAKKPSAFKVDA 241
              KKPSAFK  A
Sbjct: 278 ---KKPSAFKAAA 287



 Score = 30.4 bits (67), Expect(3) = 4e-18
 Identities = 21/50 (42%), Positives = 23/50 (46%)
 Frame = +3

Query: 399 QPKRVHDLDKLAIXXXXXXXXXXXXXKETSTVTNKNERSPPNEVNSTAGH 548
           QPKR HD  K AI             KETS VT         +V+STAGH
Sbjct: 335 QPKRDHDQPKPAISDISLDDTLDDLLKETSIVT---------KVSSTAGH 375


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