BLASTX nr result
ID: Atropa21_contig00007273
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00007273 (1312 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 405 e-110 ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 402 e-109 sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,... 376 e-101 sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, c... 370 e-100 sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 339 2e-90 sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 331 5e-88 ref|NP_001275094.1| single-stranded DNA binding protein precurso... 318 4e-84 ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 311 5e-82 ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 307 6e-81 ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 302 2e-79 ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 299 2e-78 ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 298 3e-78 ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 297 6e-78 gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 295 3e-77 gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 293 8e-77 ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 293 8e-77 ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 291 3e-76 ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr... 291 4e-76 ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 289 2e-75 gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus pe... 288 3e-75 >ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform X2 [Solanum tuberosum] Length = 291 Score = 405 bits (1042), Expect = e-110 Identities = 222/292 (76%), Positives = 231/292 (79%), Gaps = 9/292 (3%) Frame = -2 Query: 1263 MASSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPF---- 1096 MASSVSSLQFLFVTPQTLSSLKPN + SIKPF Sbjct: 1 MASSVSSLQFLFVTPQTLSSLKPNSAPTSFSFFSLPSSSLNLSLSSSTPSSSIKPFESSS 60 Query: 1095 -----VRNVALSEFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNV 931 VRNVALSEFDQLEDDV E E+PNFSPDLKLFVGNLPFSVDSAALA LFERAGNV Sbjct: 61 FGSRFVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNV 120 Query: 930 EMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSF 751 EMVEVIYDKLTGRSRGFGFVTMS+KAEVEAAE QFNGYEIDGRALRVN GP PEKRENSF Sbjct: 121 EMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGPAPEKRENSF 180 Query: 750 GGGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVY 571 GGGRGG SEN SNRVYVGNLSWGVDDL+L+ELFS+QG+VVD KVVY Sbjct: 181 GGGRGGRSEN-SSYGGARGGRNFDSSNRVYVGNLSWGVDDLSLRELFSDQGKVVDCKVVY 239 Query: 570 DRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 DRDSGRSRGFGFVT+SSA+EVN AIDSLNG DLDGRSIRVSAAEERPPRRQF Sbjct: 240 DRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPRRQF 291 >ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform X1 [Solanum tuberosum] Length = 301 Score = 402 bits (1033), Expect = e-109 Identities = 222/301 (73%), Positives = 231/301 (76%), Gaps = 18/301 (5%) Frame = -2 Query: 1263 MASSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPF---- 1096 MASSVSSLQFLFVTPQTLSSLKPN + SIKPF Sbjct: 1 MASSVSSLQFLFVTPQTLSSLKPNSAPTSFSFFSLPSSSLNLSLSSSTPSSSIKPFESSS 60 Query: 1095 -----VRNVALSEFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNV 931 VRNVALSEFDQLEDDV E E+PNFSPDLKLFVGNLPFSVDSAALA LFERAGNV Sbjct: 61 FGSRFVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNV 120 Query: 930 EMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSF 751 EMVEVIYDKLTGRSRGFGFVTMS+KAEVEAAE QFNGYEIDGRALRVN GP PEKRENSF Sbjct: 121 EMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGPAPEKRENSF 180 Query: 750 GGGRGGISEN---------XXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQG 598 GGGRGG SEN SNRVYVGNLSWGVDDL+L+ELFS+QG Sbjct: 181 GGGRGGRSENSSYGGGRSENSSYGGARGGRNFDSSNRVYVGNLSWGVDDLSLRELFSDQG 240 Query: 597 QVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQ 418 +VVD KVVYDRDSGRSRGFGFVT+SSA+EVN AIDSLNG DLDGRSIRVSAAEERPPRRQ Sbjct: 241 KVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPRRQ 300 Query: 417 F 415 F Sbjct: 301 F 301 >sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName: Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris] Length = 291 Score = 376 bits (966), Expect = e-101 Identities = 220/295 (74%), Positives = 227/295 (76%), Gaps = 13/295 (4%) Frame = -2 Query: 1260 ASSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTK--NXXXXXXXXXXXSIKPFVRN 1087 +SSVSSLQFLFVTPQT SSLKPN LP+ N SIKPF + Sbjct: 3 SSSVSSLQFLFVTPQTPSSLKPNSTLSFFS----LPSSSLNLSLSSSSTGLCSIKPFESS 58 Query: 1086 ----VALSEFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVE 919 VALS FDQLEDDVE A EQP FS DLKLFVGNLPFSVDSAALAGLFERAGNVEMVE Sbjct: 59 FSTRVALSGFDQLEDDVEVA-EQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVE 117 Query: 918 VIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKREN-SFGGG 742 VIYDKLTGRSRGFGFVTMSTK EVEAAE QFNGYEIDGRA+RVN GP P KREN SFGGG Sbjct: 118 VIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGG 177 Query: 741 RGGIS------ENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAK 580 RGG S + SNRVYVGNLSWGVDDLALKELFSEQG VVDAK Sbjct: 178 RGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAK 237 Query: 579 VVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 VVYDRDSGRSRGFGFVTYSS+KEVN+AIDSLNGVDLDGRSIRVSAAEER PRRQF Sbjct: 238 VVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER-PRRQF 291 >sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP31; Flags: Precursor gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia] Length = 292 Score = 370 bits (950), Expect = e-100 Identities = 215/296 (72%), Positives = 226/296 (76%), Gaps = 14/296 (4%) Frame = -2 Query: 1260 ASSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXS---IKPFVR 1090 +SSVSSLQFLFVT QT SSLKPN LP+ + IKPF Sbjct: 3 SSSVSSLQFLFVTSQTPSSLKPNSTLSFFS----LPSSSLNLSLSSSSIGHSASIKPFES 58 Query: 1089 N----VALSEFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 922 + VALS+FDQLEDDVE A EQP FS DLKLFVGNLPFSVDSAALAGLFERAGNVE+V Sbjct: 59 SFSTRVALSDFDQLEDDVEVA-EQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIV 117 Query: 921 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKREN-SFGG 745 EVIYDKL+GRSRGFGFVTMSTK EVEAAE QFNGYEIDGRA+RVN GP P KREN SFGG Sbjct: 118 EVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGG 177 Query: 744 GRGGIS------ENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDA 583 GRGG S + SNRVYVGNLSWGVDDLALKELFSEQG VVDA Sbjct: 178 GRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDA 237 Query: 582 KVVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 KVVYDRDSGRSRGFGFVTYSSAKEVN+AIDSLNG+DLDGRSIRVSAAEER PRRQF Sbjct: 238 KVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER-PRRQF 292 >sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName: Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris] Length = 273 Score = 339 bits (869), Expect = 2e-90 Identities = 194/289 (67%), Positives = 211/289 (73%), Gaps = 6/289 (2%) Frame = -2 Query: 1263 MASSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPFVRNV 1084 MASS SSL FL +TPQTL KP LP + FVR V Sbjct: 1 MASSASSLHFLSLTPQTLPLPKPTSQTTSLSFFS-LPPSSLNLSLSSSSSCFSSRFVRKV 59 Query: 1083 ALSEFDQLEDDVEEA----REQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEV 916 LS+FDQ+ED VE+ E+ NFSPDLK+FVGNLPFS DSAALA LFERAGNVEMVEV Sbjct: 60 TLSDFDQIED-VEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEV 118 Query: 915 IYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSF--GGG 742 IYDKLTGRSRGFGFVTMS+K EVEAA QFNGYE+DGRALRVN GPPPEKRENS GG Sbjct: 119 IYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGS 178 Query: 741 RGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRD 562 RGG S SNRVYVGNL+WGVD AL+ LFSEQG+VVDAKVVYDRD Sbjct: 179 RGGGS--------------FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRD 224 Query: 561 SGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 SGRSRGFGFVTYSSA+EVNNAI+SL+GVDL+GR+IRVS AE RPPRRQF Sbjct: 225 SGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273 >sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia] Length = 279 Score = 331 bits (848), Expect = 5e-88 Identities = 191/294 (64%), Positives = 207/294 (70%), Gaps = 11/294 (3%) Frame = -2 Query: 1263 MASSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPFVRNV 1084 MASS SSL FL +TPQTL KP LP + FVR V Sbjct: 1 MASSASSLHFLSLTPQTLLLPKPTSQTTSLSFFS-LPPSSLNLSLSSPSSCFSSRFVRKV 59 Query: 1083 ALSEFDQLED---DVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVI 913 L +FDQ+ED E E+ NFSPDLK+FVGNL FS DSAALA LFERAGNVEMVEVI Sbjct: 60 TLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVI 119 Query: 912 YDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSF------ 751 YDKLTGRSRGFGFVTMS+K EVEAA QFNGYE+DGRALRVN GPPPEKRENS Sbjct: 120 YDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSS 179 Query: 750 --GGGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKV 577 GG RGG S SNRVYVGNL+WGVD AL+ LFSEQG+VVDAKV Sbjct: 180 FRGGSRGGGS--------------FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKV 225 Query: 576 VYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 VYDRDSGRSRGFGFVTYSSA+EVNNAI+SL+GVDL+GR+IRVS AE RPPRRQF Sbjct: 226 VYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279 >ref|NP_001275094.1| single-stranded DNA binding protein precursor [Solanum tuberosum] gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum] Length = 289 Score = 318 bits (814), Expect = 4e-84 Identities = 190/305 (62%), Positives = 210/305 (68%), Gaps = 22/305 (7%) Frame = -2 Query: 1263 MASSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXSIKP--FVR 1090 MASS SSL FL +TPQTL KP P+ + + FVR Sbjct: 1 MASSSSSLHFLSLTPQTLP--KPTSQTTSISFFSLPPSSLNLSLSSSSTPRNFESSRFVR 58 Query: 1089 NVALSEFDQLE------DDVEE--------AREQPNFSPDLKLFVGNLPFSVDSAALAGL 952 V LS+FDQ+E DD EE + E+ N +PDLK+FVGNLPFSVDSAALA L Sbjct: 59 KVTLSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAEL 118 Query: 951 FERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPP 772 FERAG+VEMVEVIYDKLTGRSRGFGFVTMS+K VEAA QFNGYEIDGRALRVN GP P Sbjct: 119 FERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAP 178 Query: 771 EKRENSFG------GGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELF 610 KRENSFG GGRGG S + SNRVYVGNL+W VD L+ LF Sbjct: 179 PKRENSFGDNSSYQGGRGGGSMD--------------SSNRVYVGNLAWSVDQQQLETLF 224 Query: 609 SEQGQVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERP 430 SEQG+VVDAKVVYDRDSGRSRGFGFVTYSSAKEVN+AI+SL+GVDL GR+IRVS AE RP Sbjct: 225 SEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARP 284 Query: 429 PRRQF 415 PRRQF Sbjct: 285 PRRQF 289 >ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum lycopersicum] Length = 290 Score = 311 bits (796), Expect = 5e-82 Identities = 185/304 (60%), Positives = 204/304 (67%), Gaps = 21/304 (6%) Frame = -2 Query: 1263 MASSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPFVRNV 1084 MASS SSL FL +TPQTL S FVR V Sbjct: 1 MASSSSSLHFLSLTPQTLPKPTSQTTSISFFSLPSSSLNLSLSSSSTPRYFESSRFVRKV 60 Query: 1083 ALSEFDQLE------DDVEE---------AREQPNFSPDLKLFVGNLPFSVDSAALAGLF 949 LS+FDQ+E DD EE + ++ N +PDLK+FVGNLPFSVDSA LA LF Sbjct: 61 TLSDFDQIEEVGAGDDDEEEEGGLSDEGASYQERNANPDLKIFVGNLPFSVDSAYLAELF 120 Query: 948 ERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPE 769 ERAG+VEMVEVIYDKLTGRSRGFGFVTMS+K VEAA QFNGYEIDGRALRVN GP P Sbjct: 121 ERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPP 180 Query: 768 KRENSFG------GGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFS 607 KRENSFG GGRGG S + SNRVYVGNL+W VD L+ LFS Sbjct: 181 KRENSFGGNSSYQGGRGGGSMD--------------SSNRVYVGNLAWSVDQQQLETLFS 226 Query: 606 EQGQVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPP 427 EQG+VVDAKVVYDRDSGRSRGFGFVTYSSA+EVN+AI+SL+GVDL GR+IRVS AE RPP Sbjct: 227 EQGKVVDAKVVYDRDSGRSRGFGFVTYSSAQEVNDAIESLDGVDLGGRAIRVSPAEARPP 286 Query: 426 RRQF 415 RRQF Sbjct: 287 RRQF 290 >ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 277 Score = 307 bits (787), Expect = 6e-81 Identities = 170/285 (59%), Positives = 204/285 (71%), Gaps = 2/285 (0%) Frame = -2 Query: 1263 MASSVSSLQFLFVTPQTLS--SLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPFVR 1090 M +S +SL +TP+TL+ S KP S + + FVR Sbjct: 1 MTTSTASLVLPSLTPKTLALYSPKPTSVSLFSLSSFSSLKPISISASFLSSGKASRSFVR 60 Query: 1089 NVALSEFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIY 910 +VA+S+F+Q E+ + +PNFSPDLKLFVGNLPF+VDSA LA LFE AGNVEMVEVIY Sbjct: 61 HVAVSDFEQDEEVLSGDEAEPNFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIY 120 Query: 909 DKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSFGGGRGGI 730 DK TGRSRGFGFVTMS+ EVEAA QFNGYE+DGRALRVN GPPP + E+SF G RGG Sbjct: 121 DKTTGRSRGFGFVTMSSAQEVEAAARQFNGYELDGRALRVNYGPPPPRTEDSFRGARGGS 180 Query: 729 SENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRDSGRS 550 SNR+YVGNL+WGVD+LAL+ LF+EQG+V++AKVV+DRDSGRS Sbjct: 181 PRG--------GGGYGDSSNRLYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRS 232 Query: 549 RGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 RGFGFVTY SA+E+N+AI+SL+GVDL GRSIRV+AAE RPPRRQF Sbjct: 233 RGFGFVTYGSAEEMNSAIESLDGVDLGGRSIRVTAAEPRPPRRQF 277 >ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|568855826|ref|XP_006481497.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Citrus sinensis] gi|557530828|gb|ESR42011.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 282 Score = 302 bits (773), Expect = 2e-79 Identities = 165/234 (70%), Positives = 182/234 (77%), Gaps = 6/234 (2%) Frame = -2 Query: 1098 FVRNVALS-EFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 922 FVRNVA+S EFDQ E+D+ + NFSPDLKLFVGNLPFSVDSA LAGLFE AGNVEMV Sbjct: 65 FVRNVAVSSEFDQ-EEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMV 123 Query: 921 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRE-----N 757 EVIYDK+TGRSRGFGFVTMS+ EVEAA QFNGYE++GR LRVN GPPP +RE Sbjct: 124 EVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRG 183 Query: 756 SFGGGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKV 577 GGG G S NRVYVGNLSWGVDDLAL+ LF EQG+V++AKV Sbjct: 184 PRGGGAGAPSSG---------------GNRVYVGNLSWGVDDLALETLFREQGKVLEAKV 228 Query: 576 VYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 VYDR+SGRSRGFGFVTYSSA+EV+NAIDSLNGVDL GR+IRVS AE RP RRQF Sbjct: 229 VYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 282 >ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella] gi|482563453|gb|EOA27643.1| hypothetical protein CARUB_v10023790mg [Capsella rubella] Length = 284 Score = 299 bits (765), Expect = 2e-78 Identities = 155/230 (67%), Positives = 179/230 (77%), Gaps = 2/230 (0%) Frame = -2 Query: 1098 FVRNVALSEFDQLEDDVEE--AREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEM 925 FVRNVA SEF+ ED + A ++ +FS DLKLFVGNLPF+VDSA LA LFE AGNVEM Sbjct: 59 FVRNVATSEFEVEEDGFSDDAAPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEM 118 Query: 924 VEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSFGG 745 VEVIYDK+TGRSRGFGFVTMS+ +EVEAA QFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 119 VEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSR 178 Query: 744 GRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDR 565 G + NRVYVGNLSWGVDD+AL+ LF+EQG+VV+A+V+YDR Sbjct: 179 G----PRSSFGGSGYGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDR 234 Query: 564 DSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 DSGRS+GFGFVTY+S++EV NAI+SLNG DLDGR IRVS AE RPPRRQF Sbjct: 235 DSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 284 >ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata] Length = 289 Score = 298 bits (764), Expect = 3e-78 Identities = 156/231 (67%), Positives = 181/231 (78%), Gaps = 3/231 (1%) Frame = -2 Query: 1098 FVRNVAL-SEFDQLEDDVEE--AREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVE 928 FVRNVA+ SEF+ ED + A +Q +FS DLKLFVGNLPF+VDSA LA LFE AGNVE Sbjct: 59 FVRNVAITSEFEVEEDGFADDAAPQQQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVE 118 Query: 927 MVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSFG 748 MVEVIYDK+TGRSRGFGFVTMS+ +EVEAA +QFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 119 MVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVNAGPPPPKREDGFS 178 Query: 747 GGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYD 568 G + NRVYVGNLSWGVDD+AL+ LF+EQG+VV+A+V+YD Sbjct: 179 RGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYD 238 Query: 567 RDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 RDSGRS+GFGFVTY+S++EV NAI+SLNG DLDGR IRVS AE RPPRRQF Sbjct: 239 RDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 289 >ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis vinifera] Length = 288 Score = 297 bits (761), Expect = 6e-78 Identities = 154/229 (67%), Positives = 181/229 (79%), Gaps = 1/229 (0%) Frame = -2 Query: 1098 FVRNVALSEFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVE 919 FVRNVA+S + ++DV +P+FSPDLKLFVGNLPF+VDSA LAGLFE+AGNVEMVE Sbjct: 61 FVRNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVE 120 Query: 918 VIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENS-FGGG 742 VIYDK+TGRSRGFGFVTMST EVEAA QFNGYE++GR LRVN GPPP +RENS F G Sbjct: 121 VIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGE 180 Query: 741 RGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRD 562 +NR+YVGNLSWGVDDLAL+ LFSEQG+V +A+V+YDR+ Sbjct: 181 NSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRE 240 Query: 561 SGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 +GRSRGFGFVTY+SA+EVN AI+SL+GVDL+GRSIRV+ AE R PRRQF Sbjct: 241 TGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR-PRRQF 288 >gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] Length = 289 Score = 295 bits (755), Expect = 3e-77 Identities = 157/232 (67%), Positives = 179/232 (77%), Gaps = 4/232 (1%) Frame = -2 Query: 1098 FVRNVAL-SEFDQLED---DVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNV 931 FVRNVA+ SEF+ ED DV +EQ +FS DLKLFVGNLPF+VDSA LA LFE AGNV Sbjct: 59 FVRNVAITSEFEVEEDGFADVAPPKEQ-SFSADLKLFVGNLPFNVDSAQLAQLFESAGNV 117 Query: 930 EMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSF 751 EMVEVIYDK+TGRSRGFGFVTMS+ +EVEAA QFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 118 EMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGF 177 Query: 750 GGGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVY 571 G + NRVYVGNLSWGVDD+AL+ LFSEQG+VV+A+V+Y Sbjct: 178 SRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIY 237 Query: 570 DRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 DRDSGRS+GFGFVTY S++EV NAI SL+G DLDGR IRVS AE RPPRRQ+ Sbjct: 238 DRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289 >gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] Length = 296 Score = 293 bits (751), Expect = 8e-77 Identities = 157/229 (68%), Positives = 179/229 (78%), Gaps = 1/229 (0%) Frame = -2 Query: 1098 FVRNVALS-EFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 922 FV VA+S EFDQ ED + + E+P FSPDLKLFVGNLPFSVDSA LAGLFER GNVEMV Sbjct: 72 FVPKVAVSSEFDQDEDVLSDGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLFERTGNVEMV 131 Query: 921 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSFGGG 742 EVIYDK TGRSRGFGFVTMS+ EVEAA QFNGYE++GR LRVN GPPP + ++SF G Sbjct: 132 EVIYDKTTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRG 191 Query: 741 RGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRD 562 R G NRVYVGNLSWGVD+ AL+ LFSEQG+V++AKVVYDRD Sbjct: 192 RRG---GGGGGGGGGGGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRD 248 Query: 561 SGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 SGRSRGFGFVTY++A EVN+AI+SLNGVDL+GRSIRV+ AE + PRR F Sbjct: 249 SGRSRGFGFVTYNTADEVNSAINSLNGVDLNGRSIRVTHAEAK-PRRSF 296 >ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana] gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags: Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana] gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana] gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana] gi|330254275|gb|AEC09369.1| chloroplast RNA binding protein [Arabidopsis thaliana] Length = 289 Score = 293 bits (751), Expect = 8e-77 Identities = 156/232 (67%), Positives = 178/232 (76%), Gaps = 4/232 (1%) Frame = -2 Query: 1098 FVRNVAL-SEFDQLED---DVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNV 931 F RNVA+ SEF+ ED DV +EQ +FS DLKLFVGNLPF+VDSA LA LFE AGNV Sbjct: 59 FARNVAITSEFEVEEDGFADVAPPKEQ-SFSADLKLFVGNLPFNVDSAQLAQLFESAGNV 117 Query: 930 EMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSF 751 EMVEVIYDK+TGRSRGFGFVTMS+ +EVEAA QFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 118 EMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGF 177 Query: 750 GGGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVY 571 G + NRVYVGNLSWGVDD+AL+ LFSEQG+VV+A+V+Y Sbjct: 178 SRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIY 237 Query: 570 DRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 DRDSGRS+GFGFVTY S++EV NAI SL+G DLDGR IRVS AE RPPRRQ+ Sbjct: 238 DRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289 >ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] Length = 280 Score = 291 bits (746), Expect = 3e-76 Identities = 171/293 (58%), Positives = 197/293 (67%), Gaps = 12/293 (4%) Frame = -2 Query: 1257 SSVSSLQFLFVTPQTLSSLKPNXXXXXXXXXXSLPTKNXXXXXXXXXXXSIKP------F 1096 +S SSL + P+TLS PN + P +P F Sbjct: 4 ASASSLVLPSLNPKTLSLCNPNKPISLSFKLHAKPISIPSSLFSSFVPLQQQPYSSSSRF 63 Query: 1095 VRNVALS-EFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVE 919 V +VA+S EF Q E+DV ++ +FS DLKLFVGNLPF+VDSA LAGLFE AGNVEMVE Sbjct: 64 VPSVAISSEFGQ-EEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVE 122 Query: 918 VIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEK-----RENS 754 VIYDK+TGRSRGFGFVTMS+ EVEAA QFNGYE++GRALRVN GPPP++ R Sbjct: 123 VIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPR 182 Query: 753 FGGGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVV 574 FGGG GG NR+YVGNLSW VD+LAL+ FSEQG+VVDAKVV Sbjct: 183 FGGGGGG--------------GESLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVV 228 Query: 573 YDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 YDR+SGRSRGFGFVTYSSA+EV NAIDSLNG +LDGR+IRVS AE R PRRQF Sbjct: 229 YDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEAR-PRRQF 280 >ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum] gi|557112071|gb|ESQ52355.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum] Length = 292 Score = 291 bits (745), Expect = 4e-76 Identities = 153/232 (65%), Positives = 177/232 (76%), Gaps = 4/232 (1%) Frame = -2 Query: 1098 FVRNVALSEFDQLEDDV----EEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNV 931 FVRNVA++E ++E+D + A + +FS DLKLFVGNLPF VDSA LA LFE AG V Sbjct: 63 FVRNVAVTEDFEVEEDGIFADDAAPREQSFSADLKLFVGNLPFDVDSARLAQLFESAGTV 122 Query: 930 EMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSF 751 E+VEVIYDK+TGRSRGFGFVTMS+ +EVEAA QFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 123 EIVEVIYDKITGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGF 182 Query: 750 GGGRGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVY 571 RG S NRVYVGNLSWGVDD+AL+ LF EQG+VV+A+V+Y Sbjct: 183 --SRGPRSSFGSSGSGYGGGSGAGSGNRVYVGNLSWGVDDMALENLFGEQGKVVEARVIY 240 Query: 570 DRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 DRDSGRS+GFGFVTY+SA+EV NAI +LNG DLDGR IRVS AE RPPRRQF Sbjct: 241 DRDSGRSKGFGFVTYNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPRRQF 292 >ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 273 Score = 289 bits (740), Expect = 2e-75 Identities = 157/229 (68%), Positives = 179/229 (78%), Gaps = 1/229 (0%) Frame = -2 Query: 1098 FVRNVALS-EFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 922 F++NVA+S EF Q ED + + EQ +FS DLKLFVGNLPF+VDSA LAGLFE AGNVEMV Sbjct: 61 FLKNVAISSEFGQEEDFLSDGDEQ-SFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMV 119 Query: 921 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSFGGG 742 EVIYDK+TGRSRGFGFVTM+T EVEAA QFNGYE+DGR LRVN GPPP+K + G Sbjct: 120 EVIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGP 179 Query: 741 RGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRD 562 RGG NRVYVGNLSW VD+LAL+ LF E+G+V+DAKVVYDRD Sbjct: 180 RGG--------------ETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRD 225 Query: 561 SGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 SGRSRGFGFVTYSSA+EV+NAIDSLNG +LDGR+IRVS AE + PRRQF Sbjct: 226 SGRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAIRVSVAEAK-PRRQF 273 >gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] Length = 298 Score = 288 bits (738), Expect = 3e-75 Identities = 156/229 (68%), Positives = 183/229 (79%), Gaps = 1/229 (0%) Frame = -2 Query: 1098 FVRNVALS-EFDQLEDDVEEAREQPNFSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 922 FVRNVA+S EF+Q E+ + + E +F+PDLKLFVGNLPFSVDSA LAGLFE AGNVEMV Sbjct: 86 FVRNVAVSSEFEQDEEVLSDDGEA-SFAPDLKLFVGNLPFSVDSAQLAGLFESAGNVEMV 144 Query: 921 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEHQFNGYEIDGRALRVNCGPPPEKRENSFGGG 742 EVIYDK TGRSRGFGFVTMS+ E E A Q NGYE+DGRALRVN GPPP + E+SF G Sbjct: 145 EVIYDKTTGRSRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGA 204 Query: 741 RGGISENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRD 562 RGG + SNR+YVGNL+WGVD+LAL+ LFSEQG+V++AKVVYDRD Sbjct: 205 RGGGGSD--------------SSNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRD 250 Query: 561 SGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 415 SGRSRGFGFVTY +A E+N+A++SL+GVDL+GRSIRV+AAE R PRRQF Sbjct: 251 SGRSRGFGFVTYGTADEMNSAMESLDGVDLNGRSIRVTAAEPR-PRRQF 298