BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007252
         (1076 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   256   2e-92
ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266...   214   3e-69
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   181   5e-57
ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598...   220   7e-55
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   172   2e-54
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   177   7e-54
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   163   2e-53
ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668...   163   2e-52
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   170   5e-52
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380...   170   5e-52
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   157   6e-52
emb|CAN61207.1| hypothetical protein VITISV_015446 [Vitis vinifera]   162   1e-51
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   168   1e-51
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   174   2e-51
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   174   2e-51
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   173   3e-51
gb|ABI34329.1| Integrase core domain containing protein [Solanum...   161   1e-50
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   161   4e-50
gb|EOY10155.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ...   156   5e-50
emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]   155   7e-50

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  256 bits (654), Expect(2) = 2e-92
 Identities = 137/275 (49%), Positives = 181/275 (65%), Gaps = 39/275 (14%)
 Frame = +2

Query: 23  MRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYSLFHKSSG 202
           MR  PG+T P+ SH CR+RKSLYG KQAS Q Y RLSS+LGT GF SS+NDYSLF+K S 
Sbjct: 1   MRFPPGVTPPTPSHVCRLRKSLYGLKQASRQWYARLSSALGTRGFSSSMNDYSLFYKGSA 60

Query: 203 SFVTILAVYVDDILLT--------------------------------------DGLIVT 268
             +TIL VYVDDIL+T                                      DGLIVT
Sbjct: 61  GLITILVVYVDDILITGNNHTEISALKSFLDSEFRIKDLGEVSYFLGMEILHEPDGLIVT 120

Query: 269 Q*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPTL-RHLLG*PNFLTQTRPN 445
           Q KFA+ LL E+     R  ++P+DP+LKL+  SGELL +PT  R L+G  N+LT TRP+
Sbjct: 121 QRKFAMDLLSEYSSLSPRTVTTPLDPSLKLSSISGELLQDPTFYRRLVGKLNYLTHTRPD 180

Query: 446 LSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCDADWASCS 625
           +S+ V++LS +MQ+P SGH +AA + LRY++ +P LG+F++S  S  + G+CDADWASC 
Sbjct: 181 ISFAVQTLSQHMQSPRSGHLEAAYHTLRYIRNNPGLGIFLSSEQSFQLTGFCDADWASCP 240

Query: 626 DTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
           D+R+S+SG+++ +GG P+S K K Q VVSLS AE+
Sbjct: 241 DSRRSISGFFLTMGGCPLSWKSKKQQVVSLSSAEA 275



 Score =  111 bits (278), Expect(2) = 2e-92
 Identities = 60/114 (52%), Positives = 74/114 (64%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y S+R LVA+I+WI+   L   +  F SL VS+HCDNQ AIHIAK+PVFHE TKHIE D 
Sbjct: 277  YRSLRRLVAEIAWIV-RLLHDLSVDF-SLPVSVHCDNQSAIHIAKNPVFHERTKHIELDC 334

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDIQSPDTNLRG 1071
            HFV E LLDG           Q+ D+FTK+L G  HR  +GKL ++   + LRG
Sbjct: 335  HFVREKLLDGLISLSFVPSSSQIADIFTKSLTGPLHRSLMGKLGVRKSGSTLRG 388


>ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum
            lycopersicum]
          Length = 1537

 Score =  214 bits (546), Expect(2) = 3e-69
 Identities = 119/282 (42%), Positives = 172/282 (60%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL EEV+M+L PGL  P+    C+++KSLYG KQAS Q Y++L+ +L + G+  S  D+S
Sbjct: 1146 DLHEEVYMKLPPGLEVPNSELVCKLKKSLYGLKQASRQWYSKLTEALSSRGYSHSQFDHS 1205

Query: 182  LFHKSSGSFVTILAVYVDDILLT------------------------------------- 250
            LF++  GS    +AVYVDD++LT                                     
Sbjct: 1206 LFYRKEGSLAVFVAVYVDDVILTGTDTTEIAQLKVYLDNTFKIKDLGRLHYFLGLEILDT 1265

Query: 251  -DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPTL-RHLLG*PNF 424
             DG++++Q KF L LL E+      P SSP+DPT+KL  + G  LP+PT  R L+G  NF
Sbjct: 1266 TDGVLISQRKFTLDLLKEYDCFNYTPLSSPLDPTVKLKAKEGVPLPDPTFYRKLIGKLNF 1325

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            LT TR +++++V+ LS +MQ+P + H QAA + LRYL++D +LG+ ++ +    +  +CD
Sbjct: 1326 LTNTRLDIAFSVQHLSQFMQDPRAPHLQAAYHLLRYLKQDTTLGVQLSKNPDCTVQAFCD 1385

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +DWASCSD+R+SVSGY + LG SP+S K K Q  VSLS AE+
Sbjct: 1386 SDWASCSDSRKSVSGYLVLLGNSPISWKSKKQETVSLSSAEA 1427



 Score = 75.5 bits (184), Expect(2) = 3e-69
 Identities = 44/107 (41%), Positives = 61/107 (57%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y S+R +V +++W+    +     S +S  +S++CD+Q AIHIA++PVFHE TKHIE D 
Sbjct: 1429 YRSLRKVVGELTWL-HRLITELTVSISSP-ISVYCDSQSAIHIARNPVFHERTKHIEVDC 1486

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDIQS 1050
            HFV   L +            QL D+ TKAL G  H   L KL  +S
Sbjct: 1487 HFVRNKLQEELISLHHVSTSNQLADILTKALTGIKHSAILRKLAAKS 1533


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  181 bits (460), Expect(2) = 5e-57
 Identities = 106/282 (37%), Positives = 150/282 (53%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL+EEV+M+L PG  H      CR+RKSLYG KQA    + +LS SL   GF+ S  DYS
Sbjct: 1109 DLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYS 1168

Query: 182  LFHKSSGSFVTILAVYVDDILLT------------------------------------- 250
            LF  +  +    + +YVDD+L+                                      
Sbjct: 1169 LFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFLGIEVSRG 1228

Query: 251  -DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PNF 424
             +G+ ++Q K+AL ++ +  +  SRPA +P++    L  + G LL +P   R L+G   +
Sbjct: 1229 PEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLY 1288

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            L  TRP LSY+V  L+ +MQNP   HF AAL  +RYL+  P  G+ +N+     +  YCD
Sbjct: 1289 LLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCD 1348

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +DW SC  TR+S+S Y + LGGSP+S K K Q  VS S AE+
Sbjct: 1349 SDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEA 1390



 Score = 67.8 bits (164), Expect(2) = 5e-57
 Identities = 41/110 (37%), Positives = 57/110 (51%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M   + +I W+    L+       S    L+CD++ AIHIA +PVFHE TKHIE D 
Sbjct: 1392 YRAMSYALKEIKWL-RKLLKELGIE-QSTPARLYCDSKAAIHIAANPVFHERTKHIESDC 1449

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDIQSPDT 1059
            H V + + DG           QL D+FTKAL  +     + KL +Q+  T
Sbjct: 1450 HSVRDAVRDGIITTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNLHT 1499


>ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598606 [Solanum tuberosum]
          Length = 1453

 Score =  220 bits (561), Expect = 7e-55
 Identities = 124/282 (43%), Positives = 168/282 (59%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL+EEV+M + PGL  P     C++ KSLYG KQAS Q Y +L+++L + G+  SL+DYS
Sbjct: 812  DLNEEVYMDVPPGLDVPHTGLVCKLNKSLYGLKQASRQWYEKLTAALNSRGYTHSLHDYS 871

Query: 182  LFHKSSGSFVTILAVYVDDILLT------------------------------------- 250
            L  +  G     L VYVDDIL+T                                     
Sbjct: 872  LLFRKKGHSTVFLGVYVDDILITGTNTEEITSLKNFLNDQFKIKDLGKLHYFLGLEILYK 931

Query: 251  -DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPTL-RHLLG*PNF 424
             DG++++Q KF   LL E   +   P +SP+DPT+KL    GE LP+PTL R L+G  NF
Sbjct: 932  NDGILISQRKFVQDLLKEFHVNGLTPVTSPLDPTVKLKAHEGEPLPDPTLYRKLVGKLNF 991

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            LT TR +++Y V+ LS YMQ+P   H +AA + LRYLQ+DP+LG+FM++S    I  +CD
Sbjct: 992  LTHTRLDITYGVQHLSQYMQDPREPHLKAAFHMLRYLQKDPTLGIFMSASPDFGIQAFCD 1051

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +DWASC D+R+SVSGY + LG SP+S K K Q  +SLS AE+
Sbjct: 1052 SDWASCPDSRRSVSGYIVLLGTSPISWKSKKQDTISLSSAEA 1093



 Score =  159 bits (401), Expect(2) = 8e-52
 Identities = 83/161 (51%), Positives = 113/161 (70%), Gaps = 1/161 (0%)
 Frame = +2

Query: 251  DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPTL-RHLLG*PNFL 427
            DG++++Q KF   LL E   +   P +SP+DPT+KL    GE LP+PTL R L+G  NFL
Sbjct: 1183 DGILISQRKFVQDLLKEFHVNGLTPVTSPLDPTVKLKAHEGEPLPDPTLYRKLVGKLNFL 1242

Query: 428  TQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCDA 607
            T TR +++Y V+ LS YMQ+P   H +AA + LRYLQ+DP+LG+FM++S    I  +CD+
Sbjct: 1243 THTRLDITYGVQHLSQYMQDPREPHLKAAFHMLRYLQKDPTLGIFMSASPDFGIQAFCDS 1302

Query: 608  DWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            DWASC D+R+SVSGY + LG SP+S K K Q  +SLS AE+
Sbjct: 1303 DWASCPDSRRSVSGYIVLLGTSPISWKSKKQDTISLSSAEA 1343



 Score = 73.2 bits (178), Expect(2) = 8e-52
 Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVS------LHCDNQYAIHIAKHPVFHEHTK 891
            Y S+R +V ++ W+        +  F  L V       ++CD+Q A+HIAK PVFHE TK
Sbjct: 1345 YRSLRKVVGELVWL--------HRLFTELTVPPIGPSPVYCDSQAALHIAKKPVFHERTK 1396

Query: 892  HIEFDYHFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDI 1044
            HIE D HFV   L +G           QL D+ TKAL G  H   L KL +
Sbjct: 1397 HIEVDCHFVRSKLQEGLISLYHINTCDQLADILTKALTGIKHTAMLNKLAV 1447


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  172 bits (435), Expect(2) = 2e-54
 Identities = 103/281 (36%), Positives = 154/281 (54%), Gaps = 39/281 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL+EEV+M+L  G      +  C+++KSLYG KQAS Q + +L+++L  +GF  SL DYS
Sbjct: 924  DLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQWFAKLTTALKEYGFQQSLADYS 983

Query: 182  LFHKSSGSFVTILAVYVDDILLT------------------------------------- 250
            LF    G+ V  L VYVDD++L                                      
Sbjct: 984  LFTYRRGNIVMNLLVYVDDLILAGNDNKVCEAFKNFLDRKFGIKNLGQLKYILGIEVARG 1043

Query: 251  -DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPTL-RHLLG*PNF 424
             DGL ++Q K+AL+++ E     +RP   PM+   KL + +G LL +P + R L+G   +
Sbjct: 1044 KDGLFLSQRKYALNIIKECGLLGARPVEFPMEENHKLALANGRLLNDPGMYRRLVGRLIY 1103

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            LT TRP+L+Y V  LS +MQ+P   H  AA   +RYL++ P  G+ + + +   ++ Y D
Sbjct: 1104 LTVTRPDLTYXVHVLSQFMQSPREEHLDAAYRVVRYLKKGPGQGIVLKADNDLQLYCYSD 1163

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAE 727
            +DW SC  TR+S+SG  ++LG SP+S + K Q  +S S AE
Sbjct: 1164 SDWXSCPLTRRSISGCCVKLGTSPISWRCKKQGTISRSSAE 1204



 Score = 68.6 bits (166), Expect(2) = 2e-54
 Identities = 40/100 (40%), Positives = 55/100 (55%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y SM    ++++W+   SL +     +   + L+CDN+ A+HIA +PVFHE TKHIE D 
Sbjct: 1207 YXSMAMAASELTWL--KSLLASLGVLHDKPMKLYCDNKAALHIAANPVFHERTKHIEIDC 1264

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFL 1029
            HFV E +  G           Q  D+FTKAL     +QFL
Sbjct: 1265 HFVREKVQSGEIVTTYLPSKLQXADMFTKALG---RQQFL 1301


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  177 bits (449), Expect(2) = 7e-54
 Identities = 107/282 (37%), Positives = 156/282 (55%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            +L EEV+M   PGL    ++  CR+RKS+YG KQAS   ++  ++++ + G+I S  DYS
Sbjct: 1337 NLQEEVYMTPPPGLRRQGENLVCRLRKSIYGLKQASRNWFSTFTATVKSAGYIQSKADYS 1396

Query: 182  LFHKSSGSFVTILAVYVDDILLTD------------------------------------ 253
            LF KS G+  T + +YVDDILLT                                     
Sbjct: 1397 LFTKSQGNKFTAILIYVDDILLTGNDLHEIKMLKTHLLKRFFIKDLGELKYFLGIEFSRS 1456

Query: 254  --GLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PNF 424
              G+ ++Q K+ L +L +      +P   PM+  LKLT E GELL +P+  R L+G   +
Sbjct: 1457 KKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRYRRLVGRLIY 1516

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            LT TRP++ Y+VR+LS +M  P   H++AAL  LRY++  P  GLF+ S ++  +  +CD
Sbjct: 1517 LTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCD 1576

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +DW  C  +R+SVSGY + LG S +S K K Q  VS S AE+
Sbjct: 1577 SDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEA 1618



 Score = 61.6 bits (148), Expect(2) = 7e-54
 Identities = 32/59 (54%), Positives = 36/59 (61%)
 Frame = +1

Query: 826  LHCDNQYAIHIAKHPVFHEHTKHIEFDYHFVFEILLDGFXXXXXXXXXXQLDDLFTKAL 1002
            L CDNQ A++IA +PVFHE TKHIE D H V E L  G           QL D+FTKAL
Sbjct: 1650 LFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVSTKMQLADVFTKAL 1708


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  163 bits (412), Expect(2) = 2e-53
 Identities = 98/282 (34%), Positives = 153/282 (54%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL+EEV+M+L PG      +  CR+RKSLYG KQA    + +L ++L  +GF+ S +DYS
Sbjct: 1069 DLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYS 1128

Query: 182  LFHKSSGSFVTILAVYVDDILLTD------------------------------------ 253
            LF  + G+    + VYVDD++++                                     
Sbjct: 1129 LFTYTKGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVARS 1188

Query: 254  --GLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPN-PTLRHLLG*PNF 424
              GL + Q K+ L ++ E     ++P   P++   +L + +GELL N  + R L+G   +
Sbjct: 1189 SAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNLESYRRLVGRLIY 1248

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            L  TRP+L+Y+V  LS +MQ P   H++AAL  + YL+  P  G+ + + S   + G+CD
Sbjct: 1249 LAVTRPDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWCD 1308

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +DWA+C  T++S+SG+ + LG SP+S K K Q  VS S AE+
Sbjct: 1309 SDWAACPVTKRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEA 1350



 Score = 74.3 bits (181), Expect(2) = 2e-53
 Identities = 41/108 (37%), Positives = 55/108 (50%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M  +  ++ W+    L       +   + L CD+Q A+H+AK+PVFHE TKHIE D 
Sbjct: 1352 YRAMAAVTCELKWL--KGLLLSLGMHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDC 1409

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDIQSP 1053
            HFV + + DG           QL D+FTKAL        L KL I  P
Sbjct: 1410 HFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKLGIFEP 1457


>ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668041 [Glycine max]
          Length = 1176

 Score =  163 bits (413), Expect(2) = 2e-52
 Identities = 103/285 (36%), Positives = 148/285 (51%), Gaps = 42/285 (14%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSD-SHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDY 178
            DL+E+++M   PG     +    C++R+SLYG KQ+    + + S  +   G   S  D+
Sbjct: 782  DLEEDIYMEQPPGFVAQGEYGLVCKLRRSLYGLKQSPRAWFGKFSHVVQMFGLKRSEADH 841

Query: 179  SLF--HKSSGSFVTILAVYVDDILLT---------------------------------- 250
            S+F  H S G  V ++ VYVDDI++T                                  
Sbjct: 842  SVFYYHTSPGKCVYLM-VYVDDIVITGNDTTKIVQLKEHLFSHFQTKDLGSLKYFLGIEV 900

Query: 251  ----DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG* 415
                DG++++Q K+AL +L E      RP  SPMDP LKL  +  E  P+P   R L+G 
Sbjct: 901  AQSGDGIVISQKKYALDILEETGMQNCRPVESPMDPNLKLMADQSEAYPDPERYRRLVGK 960

Query: 416  PNFLTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFG 595
              +LT TRP++S+ V  +S +MQNP   H+ A +  LRY++R P  GL      S  + G
Sbjct: 961  LIYLTITRPDISFAVGVISQFMQNPHLDHWNAVMRILRYVKRAPGQGLLYEDKGSTQLSG 1020

Query: 596  YCDADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            YCDADWA C   R+S SGYY+ +GG+ +S K K Q VV+ S AE+
Sbjct: 1021 YCDADWAGCPMDRRSTSGYYVFIGGNLISWKSKKQTVVAWSSAEA 1065



 Score = 70.9 bits (172), Expect(2) = 2e-52
 Identities = 40/93 (43%), Positives = 50/93 (53%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y SM  +  ++ WI    LQ   F    L + L+CDNQ A+HIA +PVFHE TKHIE D 
Sbjct: 1067 YRSMAMVTCELMWI-KQFLQELRFC-EELQMKLYCDNQAALHIASNPVFHERTKHIEIDC 1124

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAG 1008
            HF+ E LL             Q  D+ TK+L G
Sbjct: 1125 HFIREKLLSKEIVTEFIGSNDQPADILTKSLRG 1157


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  170 bits (431), Expect(2) = 5e-52
 Identities = 107/282 (37%), Positives = 151/282 (53%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL+EEV+MRL PG      S  CR+RKSLYG KQA    +++LS++L   GF  S  DYS
Sbjct: 1104 DLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYS 1163

Query: 182  LFHKSSGSFVTILAVYVDDILLT------------------------------------- 250
            LF   +G  +  + VYVDD+++                                      
Sbjct: 1164 LFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRG 1223

Query: 251  -DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PNF 424
             DG  ++Q K+AL ++ E      +P++ P+    KL   +G +  NP   R L+G   +
Sbjct: 1224 PDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIY 1283

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            LT TRP+LSY V  LS +MQ P   H++AAL  +RYL+  P+ G+F+ S SS  I  YCD
Sbjct: 1284 LTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCD 1343

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +D+ +C  TR+S+S Y + LG SP+S K K Q  VS S AE+
Sbjct: 1344 SDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEA 1385



 Score = 62.4 bits (150), Expect(2) = 5e-52
 Identities = 35/91 (38%), Positives = 50/91 (54%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M   + ++ W+   +L       +S  + LHCD++ AIHIA +PVFHE TKHIE D 
Sbjct: 1387 YRAMAYTLKELKWL--KALLKDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDC 1444

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKAL 1002
            H V + +LD            Q+ DL TK+L
Sbjct: 1445 HKVRDAVLDKLITTEHIYTEDQVADLLTKSL 1475


>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
            At2g23330 [Arabidopsis thaliana]
            gi|110742535|dbj|BAE99183.1| putative retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 776

 Score =  170 bits (431), Expect(2) = 5e-52
 Identities = 107/282 (37%), Positives = 151/282 (53%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL+EEV+MRL PG      S  CR+RKSLYG KQA    +++LS++L   GF  S  DYS
Sbjct: 384  DLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYS 443

Query: 182  LFHKSSGSFVTILAVYVDDILLT------------------------------------- 250
            LF   +G  +  + VYVDD+++                                      
Sbjct: 444  LFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRG 503

Query: 251  -DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PNF 424
             DG  ++Q K+AL ++ E      +P++ P+    KL   +G +  NP   R L+G   +
Sbjct: 504  PDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIY 563

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            LT TRP+LSY V  LS +MQ P   H++AAL  +RYL+  P+ G+F+ S SS  I  YCD
Sbjct: 564  LTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCD 623

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +D+ +C  TR+S+S Y + LG SP+S K K Q  VS S AE+
Sbjct: 624  SDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEA 665



 Score = 62.4 bits (150), Expect(2) = 5e-52
 Identities = 35/91 (38%), Positives = 50/91 (54%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M   + ++ W+   +L       +S  + LHCD++ AIHIA +PVFHE TKHIE D 
Sbjct: 667  YRAMAYTLKELKWL--KALLKDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDC 724

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKAL 1002
            H V + +LD            Q+ DL TK+L
Sbjct: 725  HKVRDAVLDKLITTEHIYTEDQVADLLTKSL 755


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  157 bits (398), Expect(2) = 6e-52
 Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL+EEV+M+L PG      +  CR+ KSLYG KQA    + +L ++L  +GF+ S +DYS
Sbjct: 737  DLEEEVYMKLPPGFESSDPNLVCRLWKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYS 796

Query: 182  LFHKSSGSFVTILAVYVDDILLTD------------------------------------ 253
            LF  + G+    + VYVDD++++                                     
Sbjct: 797  LFTYTKGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVARS 856

Query: 254  --GLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNP-TLRHLLG*PNF 424
              GL + Q K+ L ++ E     ++P    ++   +L + +GELL NP + R L+G   +
Sbjct: 857  SAGLFLCQRKYTLDIVSEAGLLGAKPCGFSIEQNHRLGLANGELLSNPESYRRLVGRLIY 916

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            L  TRPNL+Y+V  LS +MQ P   H++ AL  + YL+  P  G+ + + S   + G+CD
Sbjct: 917  LAVTRPNLAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQGWCD 976

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +DWA+C  TR+S+SG+ + LG S +S K K Q  VS S AE+
Sbjct: 977  SDWAACPVTRRSLSGWLVFLGQSHISWKTKKQHTVSRSSAEA 1018



 Score = 74.7 bits (182), Expect(2) = 6e-52
 Identities = 41/109 (37%), Positives = 55/109 (50%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M  +  ++ W+    L       +   + L CD+Q A+H+ K+PVFHE TKHIE D 
Sbjct: 1020 YRAMAAVTCELKWL--KGLLLSLGVHHPKAIKLFCDSQSALHMTKNPVFHERTKHIEVDC 1077

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDIQSPD 1056
            HFV + + DG           QL D+FTKAL        L KL I  PD
Sbjct: 1078 HFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKLGIFEPD 1126


>emb|CAN61207.1| hypothetical protein VITISV_015446 [Vitis vinifera]
          Length = 900

 Score =  162 bits (409), Expect(2) = 1e-51
 Identities = 100/269 (37%), Positives = 147/269 (54%), Gaps = 26/269 (9%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSH-ACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDY 178
            DL EEV+M   PG     +S   CR+R+SLYG KQ+    ++R SS +   G + S  D+
Sbjct: 522  DLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADH 581

Query: 179  SLF--HKSSGSFVTILAVYVDDILLT----------------------DGLIVTQ*KFAL 286
            S+F  H S G  +  L VYVDDI++T                       G++++Q K+AL
Sbjct: 582  SVFYHHNSLGQCI-YLVVYVDDIVITGSDQDDLGKLKYFLGIEIAQSSSGVVLSQRKYAL 640

Query: 287  HLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNP-TLRHLLG*PNFLTQTRPNLSYTVR 463
             +L E      +P  +PMDP +KL    GE L +P   R L+G  N+LT TRP++S+ V 
Sbjct: 641  DILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVS 700

Query: 464  SLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCDADWASCSDTRQSV 643
             +S ++Q+PC  H+ A +  LRY++  P  G+   +     + GY DADWA     R+S 
Sbjct: 701  VVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRST 760

Query: 644  SGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            SGY + +GG+ +S K K Q VV+ S AE+
Sbjct: 761  SGYCVFIGGNLISWKSKKQDVVARSSAEA 789



 Score = 69.7 bits (169), Expect(2) = 1e-51
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M     ++ W+    LQ   F  +  +  L CDNQ A+HIA +PVFHE TKHIE D 
Sbjct: 791  YRAMALATCELIWL-RHLLQELRFGKDEQM-KLICDNQAALHIASNPVFHERTKHIEVDC 848

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQF---LGKLDIQSP 1053
            HF+ E +  G           QL D+FTK+L G   +     LG  D+ +P
Sbjct: 849  HFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAP 899


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  168 bits (426), Expect(2) = 1e-51
 Identities = 102/282 (36%), Positives = 146/282 (51%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL+EEV+M+L PG  H      CR+RKSLYG KQA    + +LS +L   GFI    DYS
Sbjct: 1099 DLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYS 1158

Query: 182  LFHKSSGSFVTILAVYVDDILLT------------------------------------- 250
             F  S       + VYVDD+++                                      
Sbjct: 1159 FFSYSCKGIELRVLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIEVSRG 1218

Query: 251  -DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PNF 424
             DG+ ++Q K+AL ++ +     +RPA +P++    L  + G LL +P   R L+G   +
Sbjct: 1219 PDGIFLSQRKYALDIISDSGTLGARPAYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLY 1278

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            L  TRP LSY+V  LS +MQ P   H +AA+  +RYL+  P  G+ ++S+    +  YCD
Sbjct: 1279 LLHTRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCD 1338

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +D+ SC  TR+S+S Y + LGGSP+S K K Q  VS S AE+
Sbjct: 1339 SDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEA 1380



 Score = 62.8 bits (151), Expect(2) = 1e-51
 Identities = 40/110 (36%), Positives = 56/110 (50%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M   + +I W+    L+    +  +    L CD++ AI IA +PVFHE TKHIE D 
Sbjct: 1382 YRAMSVALKEIKWL-NKLLKELGITL-AAPTRLFCDSKAAISIAANPVFHERTKHIERDC 1439

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDIQSPDT 1059
            H V + + DG           QL D+FTKAL  +     + KL IQ+  T
Sbjct: 1440 HSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQNLHT 1489


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  174 bits (440), Expect(2) = 2e-51
 Identities = 104/283 (36%), Positives = 164/283 (57%), Gaps = 40/283 (14%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL EEV+M+L  G      S  CR+ KSLYG KQA    +++LSS+L  +GF  SL+DYS
Sbjct: 1076 DLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYS 1135

Query: 182  LF-HKSSGSFVTILAVYVDDILLT------------------------------------ 250
            LF + + G FV +L VYVDD++++                                    
Sbjct: 1136 LFSYNNDGIFVHVL-VYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSR 1194

Query: 251  --DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PN 421
               G  ++Q K+ L ++ E     +RP++ P++   KL++ +  LL + +  R L+G   
Sbjct: 1195 NAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLI 1254

Query: 422  FLTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYC 601
            +L  TRP LSY+V +L+ +MQNP   H+ AA+  +RYL+ +P  G+ ++S+S+  I G+C
Sbjct: 1255 YLVVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWC 1314

Query: 602  DADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            D+D+A+C  TR+S++GY+++LG +P+S K K QP VS S AE+
Sbjct: 1315 DSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEA 1357



 Score = 56.6 bits (135), Expect(2) = 2e-51
 Identities = 36/105 (34%), Positives = 52/105 (49%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M  L  ++ W+    L     S    +  +  D++ AI ++ +PV HE TKH+E D 
Sbjct: 1359 YRAMAFLTQELMWL-KRVLYDLGVSHVQAM-RIFSDSKSAIALSVNPVQHERTKHVEVDC 1416

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDI 1044
            HF+ + +LDG           QL D+ TKAL     R FL KL I
Sbjct: 1417 HFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGI 1461


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  174 bits (440), Expect(2) = 2e-51
 Identities = 104/283 (36%), Positives = 164/283 (57%), Gaps = 40/283 (14%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL EEV+M+L  G      S  CR+ KSLYG KQA    +++LSS+L  +GF  SL+DYS
Sbjct: 717  DLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYS 776

Query: 182  LF-HKSSGSFVTILAVYVDDILLT------------------------------------ 250
            LF + + G FV +L VYVDD++++                                    
Sbjct: 777  LFSYNNDGVFVHVL-VYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSR 835

Query: 251  --DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PN 421
               G  ++Q K+ L ++ E     +RP++ P++   KL++ +  LL + +  R L+G   
Sbjct: 836  NAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLI 895

Query: 422  FLTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYC 601
            +L  TRP LSY+V +L+ +MQNP   H+ AA+  +RYL+ +P  G+ ++S+S+  I G+C
Sbjct: 896  YLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWC 955

Query: 602  DADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            D+D+A+C  TR+S++GY+++LG +P+S K K QP VS S AE+
Sbjct: 956  DSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEA 998



 Score = 56.6 bits (135), Expect(2) = 2e-51
 Identities = 36/105 (34%), Positives = 52/105 (49%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M  L  ++ W+    L     S    +  +  D++ AI ++ +PV HE TKH+E D 
Sbjct: 1000 YRAMAFLTQELMWL-KRVLYDLGVSHVQAM-RIFSDSKSAIALSVNPVQHERTKHVEVDC 1057

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDI 1044
            HF+ + +LDG           QL D+ TKAL     R FL KL I
Sbjct: 1058 HFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGI 1102


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  173 bits (439), Expect(2) = 3e-51
 Identities = 103/283 (36%), Positives = 164/283 (57%), Gaps = 40/283 (14%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL EEV+M+L  G      S  CR+ KSLYG KQA    +++LSS+L  +GF  SL+DYS
Sbjct: 717  DLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYS 776

Query: 182  LF-HKSSGSFVTILAVYVDDILLT------------------------------------ 250
            LF + + G FV +L VYVDD++++                                    
Sbjct: 777  LFSYNNDGVFVHVL-VYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSR 835

Query: 251  --DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PN 421
               G  ++Q K+ L ++ E     +RP++ P++   KL++ +  LL + +  R L+G   
Sbjct: 836  NAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLI 895

Query: 422  FLTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYC 601
            +L  TRP LSY+V +L+ +MQNP   H+ AA+  +RYL+ +P  G+ ++S+S+  I G+C
Sbjct: 896  YLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWC 955

Query: 602  DADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            D+D+A+C  TR+S++GY+++LG +P+S K K QP +S S AE+
Sbjct: 956  DSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAEA 998



 Score = 56.6 bits (135), Expect(2) = 3e-51
 Identities = 36/105 (34%), Positives = 52/105 (49%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M  L  ++ W+    L     S    +  +  D++ AI ++ +PV HE TKH+E D 
Sbjct: 1000 YRAMAFLTQELMWL-KRVLYDLGVSHVQAM-RIFSDSKSAIALSVNPVQHERTKHVEVDC 1057

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDI 1044
            HF+ + +LDG           QL D+ TKAL     R FL KL I
Sbjct: 1058 HFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGI 1102


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  161 bits (407), Expect(2) = 1e-50
 Identities = 103/285 (36%), Positives = 146/285 (51%), Gaps = 42/285 (14%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHA--CRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLND 175
            DL+EEV+M   PG     +S +  CR+R+SLYG KQ+    + + S+ +   G   S  D
Sbjct: 991  DLEEEVYMEQPPGFVAQGESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGAD 1050

Query: 176  YSLFHKSSG-SFVTILAVYVDDILLT---------------------------------- 250
            +S+F++ S  S    L VYVDDI++T                                  
Sbjct: 1051 HSVFYRHSAPSRCIYLVVYVDDIVITGNDQDGITDLKQHLFKHFQTKDLGRLKYFLGIEV 1110

Query: 251  ----DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG* 415
                 G++++Q K+AL +L E      RP  +PMDP +KL    GE L NP   R L+G 
Sbjct: 1111 AQSRSGIVISQRKYALDILEETGMMGCRPVDTPMDPNVKLLPGQGEPLSNPERYRRLVGK 1170

Query: 416  PNFLTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFG 595
             N+LT TRP++S+ V  +S +M +PC  H++A +  LRY++  P  GL         I G
Sbjct: 1171 LNYLTVTRPDISFPVSVVSQFMTSPCDSHWEAVVRILRYIKSAPGKGLLFEDQGHEHIIG 1230

Query: 596  YCDADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            Y DADWA     R+S SGY + +GG+ VS K K Q VV+ S AES
Sbjct: 1231 YTDADWAGSPSDRRSTSGYCVLVGGNLVSWKSKKQNVVARSSAES 1275



 Score = 67.0 bits (162), Expect(2) = 1e-50
 Identities = 33/61 (54%), Positives = 39/61 (63%)
 Frame = +1

Query: 820  VSLHCDNQYAIHIAKHPVFHEHTKHIEFDYHFVFEILLDGFXXXXXXXXXXQLDDLFTKA 999
            + L CDNQ A+HIA +PVFHE TKHIE D HFV E +L G           QL D+FTK+
Sbjct: 1305 MELVCDNQAALHIASNPVFHERTKHIEIDCHFVREKILSGDIVTKFVKSNDQLADIFTKS 1364

Query: 1000 L 1002
            L
Sbjct: 1365 L 1365


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  161 bits (408), Expect(2) = 4e-50
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 39/282 (13%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSHACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDYS 181
            DL EEV+M+L PG      +  CR+RK+LYG KQA    + +L+++L  +GF  SL DYS
Sbjct: 941  DLREEVYMKLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYS 1000

Query: 182  LFHKSSGSFVTILAVYVDDILLTD------------------------------------ 253
            LF    GS    + +YVDD+++T                                     
Sbjct: 1001 LFTLVKGSVRIKILIYVDDLIITGNSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARS 1060

Query: 254  --GLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNPT-LRHLLG*PNF 424
              G+ + Q K+AL ++ E      +PA+ P++   KL + +  LL +P   R L+G   +
Sbjct: 1061 TTGIYICQRKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIY 1120

Query: 425  LTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCD 604
            L  TR +L+++V  L+ +MQ P   H+ AAL  +RYL+ DP  G+F+  S    I G+CD
Sbjct: 1121 LAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCD 1180

Query: 605  ADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            +DWA    +R+SV+GY+++ G SP+S K K Q  VS S AE+
Sbjct: 1181 SDWAGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEA 1222



 Score = 64.7 bits (156), Expect(2) = 4e-50
 Identities = 40/107 (37%), Positives = 57/107 (53%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M  L +++ W+    L S   S    ++ + CD++ AI+IA +PVFHE TKHIE DY
Sbjct: 1224 YRAMSFLASELLWL-KQLLFSLGVSHVQPMI-MCCDSKSAIYIATNPVFHERTKHIEIDY 1281

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQFLGKLDIQS 1050
            HFV +  + G           QL D+FTK L       F  KL I++
Sbjct: 1282 HFVRDEFVKGVITPRHVGTTSQLADIFTKPLGRDCFSAFRIKLGIRN 1328


>gb|EOY10155.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
          Length = 721

 Score =  156 bits (395), Expect(2) = 5e-50
 Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 16/259 (6%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLT----HPSDSH-ACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISS 166
            DLDEEV+M +  G      HPS S   C++ KSLYG KQA  Q   +L+S +  +GF  S
Sbjct: 353  DLDEEVYMDIPKGYIVKREHPSGSKLVCKLHKSLYGLKQALRQWNAKLTSCIIHYGFKQS 412

Query: 167  LNDYSLF--HKSSGSFVTILAVYVDDILLTDGLIVTQ*KFALHLL-------LEHPDHPS 319
            ++DYSLF  + + G F+ +L  YVDDIL+ +           HL        LE+    +
Sbjct: 413  MSDYSLFTMNTTDGEFIALLT-YVDDILIGNTSTQVAAVVKEHLSSQFKLKDLEYGLLGA 471

Query: 320  RPASSPMDPTLKLTMES--GELLPNPTLRHLLG*PNFLTQTRPNLSYTVRSLS*YMQNPC 493
            +P S+P+D  +KL   S   EL+ +   R L+G   +LT TRP++SY V++LS +M  P 
Sbjct: 472  KPVSTPIDYNVKLAKASKEDELVDSFKYRQLVGKLLYLTFTRPDISYAVQTLSQFMDKPG 531

Query: 494  SGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFGYCDADWASCSDTRQSVSGYYIRLGGS 673
              H+ AA   L+YL+  P  G+ M + S   I  YCD DWA C DTR+ ++GY + +G S
Sbjct: 532  RKHYMAASKVLKYLKAAPGQGILMKAESDLKISAYCDNDWAGCLDTRKFITGYCVFIGNS 591

Query: 674  PVSQKLK*QPVVSLSLAES 730
             VS K K Q VV+ S  E+
Sbjct: 592  LVSWKCKKQQVVARSSTEA 610



 Score = 69.3 bits (168), Expect(2) = 5e-50
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = +1

Query: 820  VSLHCDNQYAIHIAKHPVFHEHTKHIEFDYHFVFEILLDGFXXXXXXXXXXQLDDLFTKA 999
            V L+CDNQ AI+I+K+PV HE TKHIE D HF+ E +L G           Q+ D FTKA
Sbjct: 640  VKLYCDNQSAIYISKNPVLHERTKHIEIDCHFIREKILSGVIKPVHISTDSQVTDAFTKA 699

Query: 1000 LAGH*HRQFLGKLDIQS 1050
            L     ++ L K++I +
Sbjct: 700  LQPGQFKKLLCKMNIHN 716


>emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]
          Length = 1225

 Score =  155 bits (393), Expect(2) = 7e-50
 Identities = 100/285 (35%), Positives = 147/285 (51%), Gaps = 42/285 (14%)
 Frame = +2

Query: 2    DLDEEVFMRLLPGLTHPSDSH-ACRMRKSLYGFKQASHQ*YTRLSSSLGTHGFISSLNDY 178
            DL EEV+M   PG     +S   CR+R+SLYG KQ+    ++R SS +   G + S  D+
Sbjct: 831  DLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADH 890

Query: 179  SLF--HKSSGSFVTILAVYVDDILLT---------------------------------- 250
            S+F  H S G  +  L VYVDDI++T                                  
Sbjct: 891  SVFYHHNSLGQCI-YLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEI 949

Query: 251  ----DGLIVTQ*KFALHLLLEHPDHPSRPASSPMDPTLKLTMESGELLPNP-TLRHLLG* 415
                 G++++Q K+AL +L E      +P  +PMDP +KL    GE L +P   R L+G 
Sbjct: 950  AQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGK 1009

Query: 416  PNFLTQTRPNLSYTVRSLS*YMQNPCSGHFQAALNALRYLQRDPSLGLFMNSSSSH*IFG 595
             N+LT TRP++S+ V  +S ++Q+PC  H+ A +  LRY++  P  G+   +     + G
Sbjct: 1010 LNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVG 1069

Query: 596  YCDADWASCSDTRQSVSGYYIRLGGSPVSQKLK*QPVVSLSLAES 730
            Y DADWA     R+S SGY + +GG+ +S K K Q VV+ S AE+
Sbjct: 1070 YTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEA 1114



 Score = 69.7 bits (169), Expect(2) = 7e-50
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
 Frame = +1

Query: 730  YHSMRCLVAKISWIIPSSLQSCNFSFNSLLVSLHCDNQYAIHIAKHPVFHEHTKHIEFDY 909
            Y +M     ++ W+    LQ   F  +  +  L CDNQ A+HIA +PVFHE TKHIE D 
Sbjct: 1116 YRAMALATCELIWL-RHLLQELRFGKDEQM-KLICDNQAALHIASNPVFHERTKHIEVDC 1173

Query: 910  HFVFEILLDGFXXXXXXXXXXQLDDLFTKALAGH*HRQF---LGKLDIQSP 1053
            HF+ E +  G           QL D+FTK+L G   +     LG  D+ +P
Sbjct: 1174 HFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAP 1224