BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007229
         (707 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...   344   e-123
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g...   345   e-123
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                 322   e-111
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...   316   e-110
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]             316   e-109
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                313   e-109
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]       313   e-109
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]             315   e-109
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis...   318   e-109
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               310   e-109
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]                  311   e-109
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]                 311   e-108
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]                  308   e-108
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]              308   e-108
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]                  306   e-107
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]               305   e-107
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   311   e-107
emb|CBI28783.3| unnamed protein product [Vitis vinifera]              311   e-107
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca...   313   e-106
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca...   313   e-106

>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
            tuberosum]
          Length = 905

 Score =  344 bits (882), Expect(2) = e-123
 Identities = 165/173 (95%), Positives = 166/173 (95%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLKRRIRPNDITINIGKG P+PECPIPGQRWKEVRHDN
Sbjct: 492  VGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGVPVPECPIPGQRWKEVRHDN 551

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRS YTKDFTS
Sbjct: 552  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSAYTKDFTS 611

Query: 361  TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
             DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK
Sbjct: 612  KDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 664



 Score =  126 bits (316), Expect(2) = e-123
 Identities = 61/64 (95%), Positives = 64/64 (100%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEVAVYEPVFKAIQ+FRSGKKGGDDLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 670 KDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRT 729

Query: 696 YNAS 707
           YNAS
Sbjct: 730 YNAS 733


>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
           topoisomerase I [Nicotiana tabacum]
          Length = 852

 Score =  345 bits (884), Expect(2) = e-123
 Identities = 166/173 (95%), Positives = 167/173 (96%)
 Frame = +1

Query: 1   VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
           VGNFR  P GLFRGR EHPKMGKLKRRIRPNDITINIGKGAPIPECPIPG+RWKEVRHDN
Sbjct: 464 VGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGERWKEVRHDN 523

Query: 181 TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
           TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRS YTKDFTS
Sbjct: 524 TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSAYTKDFTS 583

Query: 361 TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
            DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK
Sbjct: 584 KDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 636



 Score =  123 bits (309), Expect(2) = e-123
 Identities = 60/64 (93%), Positives = 63/64 (98%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEVAVY+PVFKAIQ FRSGKKGGDDLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 642 KDSIRYQNEVAVYKPVFKAIQLFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRT 701

Query: 696 YNAS 707
           YNAS
Sbjct: 702 YNAS 705


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score =  322 bits (826), Expect(2) = e-111
 Identities = 153/173 (88%), Positives = 161/173 (93%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLK+RIRP DITINIGK APIPECP+PG+RWKEVRHDN
Sbjct: 495  VGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWKEVRHDN 554

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLAFWNDPINP+EFKYVFLAASS+LKG SDKEKYEKAR LKDYI+GIR+ YTKDF S
Sbjct: 555  TVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAYTKDFAS 614

Query: 361  TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
             DP K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK
Sbjct: 615  KDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 667



 Score =  108 bits (269), Expect(2) = e-111
 Identities = 54/64 (84%), Positives = 57/64 (89%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G  DLFD LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 673 KDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLTAKVFRT 732

Query: 696 YNAS 707
           YNAS
Sbjct: 733 YNAS 736


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score =  316 bits (809), Expect(2) = e-110
 Identities = 152/174 (87%), Positives = 162/174 (93%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLK+RIRP DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDPIN +EFKYVFLAASS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 572  TVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK
Sbjct: 632  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 685



 Score =  110 bits (274), Expect(2) = e-110
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score =  316 bits (809), Expect(2) = e-109
 Identities = 152/174 (87%), Positives = 162/174 (93%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLK+RIRP DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDPIN +EFKYVFLAASS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 572  TVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK
Sbjct: 632  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 685



 Score =  108 bits (269), Expect(2) = e-109
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAI +FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIHQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score =  313 bits (803), Expect(2) = e-109
 Identities = 152/174 (87%), Positives = 161/174 (92%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLK+RIRP DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 513  VGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDN 572

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLAFW DPIN +EFKYVFLAASS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 573  TVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 632

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK
Sbjct: 633  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 686



 Score =  110 bits (274), Expect(2) = e-109
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 692 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 751

Query: 696 YNAS 707
           YNAS
Sbjct: 752 YNAS 755


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score =  313 bits (802), Expect(2) = e-109
 Identities = 151/174 (86%), Positives = 161/174 (92%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLK+RIRP DITINIGK APIPECPIPG+RWKEVR+ N
Sbjct: 511  VGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNGN 570

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDPIN +EFKYVFLAASS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 571  TVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 630

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK
Sbjct: 631  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 684



 Score =  110 bits (274), Expect(2) = e-109
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 690 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 749

Query: 696 YNAS 707
           YNAS
Sbjct: 750 YNAS 753


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score =  315 bits (808), Expect(2) = e-109
 Identities = 153/175 (87%), Positives = 162/175 (92%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLK+RIRP DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLAFWNDPIN +E KYVFLAASS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 572  TVTWLAFWNDPINQKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 522
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI
Sbjct: 632  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 686



 Score =  107 bits (267), Expect(2) = e-109
 Identities = 54/64 (84%), Positives = 58/64 (90%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G  DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGCADLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
           gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
           topoisomerase 1-like [Cucumis sativus]
          Length = 889

 Score =  318 bits (816), Expect(2) = e-109
 Identities = 152/173 (87%), Positives = 161/173 (93%)
 Frame = +1

Query: 1   VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
           VGNFR  P GLFRGR EHPKMGKLKRRI P+DITINIGKGAPIPECPIPG+RWKEVRHDN
Sbjct: 476 VGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERWKEVRHDN 535

Query: 181 TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
           TVTWLAFWNDPIN +EFKYVFLAASSSLKGQSDKEKYEKAR LKDYI+ IR+ YTKDFTS
Sbjct: 536 TVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTKDFTS 595

Query: 361 TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
            DP +RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+ VPPN+L+
Sbjct: 596 KDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLE 648



 Score =  104 bits (259), Expect(2) = e-109
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRY+N V V  PVFKAI +F+SGK G DDLFD+LDTSKLNAHLK+LMPGLTAKVFRT
Sbjct: 654 KDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRT 713

Query: 696 YNAS 707
           YNAS
Sbjct: 714 YNAS 717


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  310 bits (795), Expect(2) = e-109
 Identities = 149/173 (86%), Positives = 157/173 (90%)
 Frame = +1

Query: 1   VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
           VGNFR  P  LFRGR EHPKMGKLK+ IRP+DITINIGK APIPECPIPG+ WKE+RHDN
Sbjct: 481 VGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPIPGESWKEIRHDN 540

Query: 181 TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
           TVTWLAFWNDPI PREFKYVFLAASSSLKGQSDKEKYEKAR LKD+I+GIR+ YTKDF S
Sbjct: 541 TVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQGIRAAYTKDFAS 600

Query: 361 TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
            D  KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEP PP+ILK
Sbjct: 601 KDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPKPPSILK 653



 Score =  111 bits (278), Expect(2) = e-109
 Identities = 54/64 (84%), Positives = 60/64 (93%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V  PV+KAIQ+FR+GK+GGDDLFD+LDTSKLNAHLK LMPGLTAKVFRT
Sbjct: 659 KDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLMPGLTAKVFRT 718

Query: 696 YNAS 707
           YNAS
Sbjct: 719 YNAS 722


>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
          Length = 926

 Score =  311 bits (797), Expect(2) = e-109
 Identities = 149/175 (85%), Positives = 162/175 (92%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPK+GKLK+RIRP DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDP+N +E KYVFLAASS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 572  TVTWLAYWNDPVNLKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 522
              DP+K+Q+AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI
Sbjct: 632  NKDPMKKQVAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 686



 Score =  110 bits (274), Expect(2) = e-109
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
          Length = 920

 Score =  311 bits (796), Expect(2) = e-108
 Identities = 150/175 (85%), Positives = 161/175 (92%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPK+GKLK+RIRP DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDPIN +E KYVFL ASS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 572  TVTWLAYWNDPINQKERKYVFLGASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 522
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI
Sbjct: 632  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 686



 Score =  108 bits (270), Expect(2) = e-108
 Identities = 54/64 (84%), Positives = 58/64 (90%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G  DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSADLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
          Length = 926

 Score =  308 bits (788), Expect(2) = e-108
 Identities = 148/175 (84%), Positives = 160/175 (91%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPK+GKLK+RI P DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDP+N +E KYVFLA SS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 572  TVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 522
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI
Sbjct: 632  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 686



 Score =  110 bits (274), Expect(2) = e-108
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
          Length = 920

 Score =  308 bits (788), Expect(2) = e-108
 Identities = 148/175 (84%), Positives = 160/175 (91%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPK+GKLK+RI P DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDP+N +E KYVFLA SS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 572  TVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 522
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI
Sbjct: 632  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 686



 Score =  110 bits (274), Expect(2) = e-108
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
          Length = 920

 Score =  306 bits (785), Expect(2) = e-107
 Identities = 147/175 (84%), Positives = 160/175 (91%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPK+GKLK+RI P DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDP+N +E KYVFLA SS+LKGQSDKEKYEKAR LKDYI GIR+ YTKDFT+
Sbjct: 572  TVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 522
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTL+VENVEPVPPNILKI
Sbjct: 632  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLRVENVEPVPPNILKI 686



 Score =  110 bits (274), Expect(2) = e-107
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
          Length = 926

 Score =  305 bits (781), Expect(2) = e-107
 Identities = 148/175 (84%), Positives = 160/175 (91%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPK+GKLK+RIRP DITINIGK APIPECPIPG+RWKEVR+DN
Sbjct: 512  VGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDN 571

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLA+WNDP+N +E KYVFLAASS+LKGQS KEKYEKAR LKDYI GIR+ YTK FT+
Sbjct: 572  TVTWLAYWNDPVNIKECKYVFLAASSTLKGQSVKEKYEKARVLKDYIHGIRAAYTKGFTN 631

Query: 361  T-DPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 522
              DP+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI
Sbjct: 632  NKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKI 686



 Score =  110 bits (274), Expect(2) = e-107
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRYQNEV V   VFKAIQ+FRSGK+G +DLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 691 KDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRT 750

Query: 696 YNAS 707
           YNAS
Sbjct: 751 YNAS 754


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  311 bits (796), Expect(2) = e-107
 Identities = 149/173 (86%), Positives = 159/173 (91%)
 Frame = +1

Query: 1   VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
           VGNFR  P GLFRGR EHPKMGKLK+RI P+DITINIGK AP+PECPIPG+RWKEVRHDN
Sbjct: 470 VGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPGERWKEVRHDN 529

Query: 181 TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
           TVTWLAFWNDPINP+EFKYVFLAASSSLKGQSDKEKYEKAR LKDYI+ IR+ YTKDFT+
Sbjct: 530 TVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRATYTKDFTN 589

Query: 361 TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
            D +KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VPPN L+
Sbjct: 590 KDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLE 642



 Score =  104 bits (259), Expect(2) = e-107
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRY N V V  PV+KAI +F++GK GGDDLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 648 KDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRT 707

Query: 696 YNAS 707
           YNAS
Sbjct: 708 YNAS 711


>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  311 bits (796), Expect(2) = e-107
 Identities = 149/173 (86%), Positives = 159/173 (91%)
 Frame = +1

Query: 1   VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
           VGNFR  P GLFRGR EHPKMGKLK+RI P+DITINIGK AP+PECPIPG+RWKEVRHDN
Sbjct: 311 VGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPGERWKEVRHDN 370

Query: 181 TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
           TVTWLAFWNDPINP+EFKYVFLAASSSLKGQSDKEKYEKAR LKDYI+ IR+ YTKDFT+
Sbjct: 371 TVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRATYTKDFTN 430

Query: 361 TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
            D +KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VPPN L+
Sbjct: 431 KDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLE 483



 Score =  104 bits (259), Expect(2) = e-107
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSIRY N V V  PV+KAI +F++GK GGDDLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 489 KDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRT 548

Query: 696 YNAS 707
           YNAS
Sbjct: 549 YNAS 552


>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
            gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
            isoform 1 [Theobroma cacao]
          Length = 904

 Score =  313 bits (803), Expect(2) = e-106
 Identities = 149/173 (86%), Positives = 160/173 (92%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLKRRIRP+DITINIGK APIPECPIPG+RWK+++HDN
Sbjct: 491  VGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGERWKDIKHDN 550

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLAFWNDPINP+EFKYVFLAASSSLKGQSDKEKYEKAR LKDYI+ IR+ YTKDFT+
Sbjct: 551  TVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRAAYTKDFTT 610

Query: 361  TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
             D +KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +PPN LK
Sbjct: 611  KDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLK 663



 Score = 97.4 bits (241), Expect(2) = e-106
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSI+Y N V V  PV+KAI +F++GK   DDLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 669 KDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLTAKVFRT 728

Query: 696 YNAS 707
           YNAS
Sbjct: 729 YNAS 732


>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
            gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
            isoform 3 [Theobroma cacao]
          Length = 836

 Score =  313 bits (803), Expect(2) = e-106
 Identities = 149/173 (86%), Positives = 160/173 (92%)
 Frame = +1

Query: 1    VGNFRA*PRGLFRGRREHPKMGKLKRRIRPNDITINIGKGAPIPECPIPGQRWKEVRHDN 180
            VGNFR  P GLFRGR EHPKMGKLKRRIRP+DITINIGK APIPECPIPG+RWK+++HDN
Sbjct: 491  VGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGERWKDIKHDN 550

Query: 181  TVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSVYTKDFTS 360
            TVTWLAFWNDPINP+EFKYVFLAASSSLKGQSDKEKYEKAR LKDYI+ IR+ YTKDFT+
Sbjct: 551  TVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRAAYTKDFTT 610

Query: 361  TDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILK 519
             D +KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +PPN LK
Sbjct: 611  KDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLK 663



 Score = 97.4 bits (241), Expect(2) = e-106
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = +3

Query: 516 EDSIRYQNEVAVYEPVFKAIQKFRSGKKGGDDLFDQLDTSKLNAHLKELMPGLTAKVFRT 695
           +DSI+Y N V V  PV+KAI +F++GK   DDLFD+LDTSKLNAHLKELMPGLTAKVFRT
Sbjct: 669 KDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLTAKVFRT 728

Query: 696 YNAS 707
           YNAS
Sbjct: 729 YNAS 732