BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007208
         (696 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   213   6e-53
ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777...   206   7e-51
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]              202   8e-50
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]     193   5e-47
ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578...   192   8e-47
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   185   1e-44
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...   184   3e-44
gb|ABB47941.2| retrotransposon protein, putative, unclassified [...   184   3e-44
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat...   184   3e-44
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi...   178   2e-42
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   176   6e-42
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773...   174   2e-41
gb|EMS54188.1| Putative late blight resistance protein-like prot...   150   4e-34
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...   147   2e-33
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   147   3e-33
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   143   6e-32
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]   136   6e-30
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]                    136   7e-30
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]                    135   9e-30
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...   135   9e-30

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  213 bits (541), Expect = 6e-53
 Identities = 103/231 (44%), Positives = 135/231 (58%)
 Frame = +3

Query: 3    KNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPS 182
            +NVL  P ++KNLVSVR+F TDN  ++EFDPFGFSVKDL T   L+RCDS+G LY +TPS
Sbjct: 419  RNVLVCPAIVKNLVSVRKFVTDNWCTIEFDPFGFSVKDLKTRNKLLRCDSSGPLYSVTPS 478

Query: 183  VSQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHV 362
                             +WH RLGHP  ++L  L ++  I                GKH 
Sbjct: 479  SYPSSHHALAATTSDSFIWHRRLGHPSSTLLSHLLSSLSISVPKTDLTSLCQACQLGKHT 538

Query: 363  KLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXX 542
            +LPF+ S +  +  F I+HSD+WTSP+ S SG +YY++FLD YS+F+W YP+ +KS    
Sbjct: 539  RLPFFNSNTIASSLFEIVHSDIWTSPVPSISGLKYYLIFLDQYSHFVWAYPLHRKSDTLV 598

Query: 543  XXXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                    ++TQF    KS QCDN +EY N  F +  A    VF FSCPHT
Sbjct: 599  KYINFSTYVQTQFNRQFKSLQCDNDREYDNRAFKEHLASTRTVFRFSCPHT 649


>ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777861 [Setaria italica]
          Length = 2179

 Score =  206 bits (523), Expect = 7e-51
 Identities = 102/230 (44%), Positives = 141/230 (61%)
 Frame = +3

Query: 6    NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
            NVL +P++IKNL+SVRRFT DN  S+EFDPFG SVKDL T + + RC+STGDLYP  P+ 
Sbjct: 496  NVLVSPNIIKNLISVRRFTIDNNCSIEFDPFGLSVKDLQTRSVIARCNSTGDLYPFFPAP 555

Query: 186  SQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVK 365
            S               LWH RLGH G + L  L ++N I                G+HV+
Sbjct: 556  SSTTAALTTATSSTS-LWHRRLGHLGHAALFQLISSNVISCNKHNTDHVCHACQLGRHVR 614

Query: 366  LPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXX 545
            LPF  S S    PF +IH DLWTSP++S SG++YY++ LDD +++ WT+P+  KS+    
Sbjct: 615  LPFSVSNSRAIHPFDLIHCDLWTSPVVSVSGYKYYLVILDDCTHYTWTFPLRLKSETFGV 674

Query: 546  XXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                 + ++TQF + IK+ QCDNG+E+ ++    F   +G+VF  SCP+T
Sbjct: 675  ISNFFSYVRTQFDSTIKAVQCDNGREFDHSSARTFFLTHGVVFRMSCPYT 724


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score =  202 bits (514), Expect = 8e-50
 Identities = 101/229 (44%), Positives = 133/229 (58%)
 Frame = +3

Query: 9    VLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSVS 188
            VL +PH+IKNL+S+RRFTTDN   +EFDPFG SVKDL T   + RC+S+GDLYP  P   
Sbjct: 523  VLVSPHIIKNLISIRRFTTDNNCFIEFDPFGLSVKDLQTRNVIARCNSSGDLYPFFP--- 579

Query: 189  QPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVKL 368
             P             LWH RLGH G   L  L +++ I                G+H +L
Sbjct: 580  -PATSATALLAAPASLWHRRLGHLGREALSQLVSSSAISCNKDDDYHLCHACQLGRHTRL 638

Query: 369  PFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXXX 548
            PF  S S  T  F +IH DLW SPI+S SG++YY++ LDD S+++WT+P+  KS      
Sbjct: 639  PFSTSTSRATNNFDLIHCDLWASPIVSVSGYKYYLIILDDRSHYIWTFPLRLKSDTFSTV 698

Query: 549  XXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                A ++TQF T IKS QCDNG+E+ N+    F   +G+    SCP+T
Sbjct: 699  ANFFAHVRTQFGTTIKSVQCDNGREFDNSMSRTFFLSHGVALRMSCPYT 747


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score =  193 bits (490), Expect = 5e-47
 Identities = 98/231 (42%), Positives = 136/231 (58%)
 Frame = +3

Query: 3    KNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPS 182
            KN+L AP L++NL+ VR+FT DNK S EFD FGFSVKDL T   ++RC+S GDLY +  +
Sbjct: 414  KNILVAPSLVRNLLFVRQFTRDNKCSFEFDEFGFSVKDLPTRRVILRCNSRGDLYTLPTT 473

Query: 183  VSQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHV 362
            V  P             LWH+RLGHP  + +++L +   I                GKH 
Sbjct: 474  V--PAITAHSFLAKSSTLWHHRLGHPSPAAVQTL-HKLAILSCTRSNNKLCHACHLGKHT 530

Query: 363  KLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXX 542
            +L F  S S T+ PF ++H D+WTSP+LS SG +YY++ LDD+++F WT+P+  KS    
Sbjct: 531  RLSFSKSSSSTSSPFELVHCDVWTSPVLSLSGFKYYLVVLDDFTHFCWTFPLRHKSDVHQ 590

Query: 543  XXXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                  A +KTQF+  I+ FQ DNG ++ N+    F A  G+V   SCP+T
Sbjct: 591  HLLEFVAYVKTQFSLPIRCFQADNGTKFVNHATTSFFASRGIVLRLSCPYT 641


>ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578284 [Solanum tuberosum]
          Length = 614

 Score =  192 bits (488), Expect = 8e-47
 Identities = 97/165 (58%), Positives = 109/165 (66%)
 Frame = +3

Query: 6   NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
           NVLHAPHL+KNLVS+R+FTTDN VS+EFDPFGF VKD  TG  +MRC+S G LYPIT   
Sbjct: 438 NVLHAPHLVKNLVSIRKFTTDNSVSVEFDPFGFPVKDFQTGRPVMRCESRGKLYPIT--- 494

Query: 186 SQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVK 365
             P             LWH+RLGHPG  VL SLR N  I                GKHVK
Sbjct: 495 -NPRAFPSTFAALAPSLWHDRLGHPGAPVLNSLRKNKLIECNQIKDSRICHSCPLGKHVK 553

Query: 366 LPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNF 500
           L FY S S T MPF IIHSDLWTS +LS+SGH+YYVLF+DD+S F
Sbjct: 554 LSFYASNSSTIMPFDIIHSDLWTSLVLSSSGHRYYVLFVDDHSKF 598


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  185 bits (470), Expect = 1e-44
 Identities = 98/232 (42%), Positives = 132/232 (56%), Gaps = 1/232 (0%)
 Frame = +3

Query: 3    KNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPS 182
            +++L +P +IKNL+SVRRF  DN  S+EFDPFGFSVKDL T T + R +S+G LY +  +
Sbjct: 619  RDILCSPAIIKNLISVRRFVIDNWCSVEFDPFGFSVKDLRTRTVIARFNSSGPLYSLHHA 678

Query: 183  VSQPXXXXXXXXXXXXXL-WHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKH 359
            +  P             L WH RLGH G   L  L     +                G+H
Sbjct: 679  LPPPPAATALLANSSTDLLWHRRLGHLGHDALNRLAA--VVPMTRGDLTGVCHACQLGRH 736

Query: 360  VKLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXX 539
            V+LPF  S S  +  F + H DLWTSP++S SG +YY++ LDD S+++WT+P+  KS   
Sbjct: 737  VRLPFASSTSRASTNFELFHCDLWTSPVVSASGFKYYLVILDDCSHYVWTFPLRFKSDTF 796

Query: 540  XXXXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                   A +KTQFAT I+S QCDNG+E+ N+    F   NG+    SCPHT
Sbjct: 797  TTLSHFFAYVKTQFATNIRSIQCDNGREFDNSAARTFFLTNGVHLRMSCPHT 848


>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score =  184 bits (466), Expect = 3e-44
 Identities = 95/230 (41%), Positives = 132/230 (57%)
 Frame = +3

Query: 6    NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
            NVL +P LIKNL+SV++ T DN VS+EFDP GFS+KDL T    +RCDS GDLYP+   +
Sbjct: 426  NVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLYPLR--L 483

Query: 186  SQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVK 365
              P              WH RLGHPG + L  +  + F                 G +V+
Sbjct: 484  PSPHALSATSSPSVEH-WHLRLGHPGSASLSKVLGS-FDFQCNKSAPHHCSACHVGTNVR 541

Query: 366  LPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXX 545
            LPF+ S S T  PF ++H+D+WTSPI S SG++YYV+FLDD+++++WT+P+  KS+    
Sbjct: 542  LPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNKSEVFHT 601

Query: 546  XXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                 A   TQF   + + Q DNGKEY +       + +G V   SCP++
Sbjct: 602  VRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYS 651


>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1414

 Score =  184 bits (466), Expect = 3e-44
 Identities = 95/230 (41%), Positives = 132/230 (57%)
 Frame = +3

Query: 6    NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
            NVL +P LIKNL+SV++ T DN VS+EFDP GFS+KDL T    +RCDS GDLYP+   +
Sbjct: 426  NVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLYPLR--L 483

Query: 186  SQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVK 365
              P              WH RLGHPG + L  +  + F                 G +V+
Sbjct: 484  PSPHALSATSSPSVEH-WHLRLGHPGSASLSKVLGS-FDFQCNKSAPHHCSACHVGTNVR 541

Query: 366  LPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXX 545
            LPF+ S S T  PF ++H+D+WTSPI S SG++YYV+FLDD+++++WT+P+  KS+    
Sbjct: 542  LPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNKSEVFHT 601

Query: 546  XXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                 A   TQF   + + Q DNGKEY +       + +G V   SCP++
Sbjct: 602  VRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYS 651


>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
          Length = 1417

 Score =  184 bits (466), Expect = 3e-44
 Identities = 95/230 (41%), Positives = 132/230 (57%)
 Frame = +3

Query: 6    NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
            NVL +P LIKNL+SV++ T DN VS+EFDP GFS+KDL T    +RCDS GDLYP+   +
Sbjct: 426  NVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLYPLR--L 483

Query: 186  SQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVK 365
              P              WH RLGHPG + L  +  + F                 G +V+
Sbjct: 484  PSPHALSATSSPSVEH-WHLRLGHPGSASLSKVLGS-FDFQCNKSAPHHCSACHVGTNVR 541

Query: 366  LPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXX 545
            LPF+ S S T  PF ++H+D+WTSPI S SG++YYV+FLDD+++++WT+P+  KS+    
Sbjct: 542  LPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNKSEVFHT 601

Query: 546  XXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                 A   TQF   + + Q DNGKEY +       + +G V   SCP++
Sbjct: 602  VRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYS 651


>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
          Length = 964

 Score =  178 bits (451), Expect = 2e-42
 Identities = 94/230 (40%), Positives = 126/230 (54%)
 Frame = +3

Query: 6    NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
            NVL +P +IKNL+ VRRF  DN VS+EFD  G  VKD  +   ++ C+S GDLY + P+ 
Sbjct: 625  NVLVSPEIIKNLIVVRRFARDNDVSVEFDKDGLDVKDFHSRNMIVWCNSFGDLYLVRPT- 683

Query: 186  SQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVK 365
                            LWH+RLGH G   L  L  ++ I                G+H +
Sbjct: 684  ---ELHYALAARESSVLWHHRLGHLGSEALTRLARSSVIPPYRELSVCHACQ--LGRHCR 738

Query: 366  LPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXX 545
            LPF  S++  T  F +IH DLWTSP+ S SG++YY++ LDD S+F+WT+P+  KS     
Sbjct: 739  LPFNTSFTRATSNFDLIHCDLWTSPVSSVSGYKYYLVILDDCSHFVWTFPLRLKSDTFRT 798

Query: 546  XXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                 A +KTQF+  IKS QCDNG ++ N     F    G+V   SCPHT
Sbjct: 799  LTNFFAYVKTQFSKTIKSIQCDNGGKFDNTAARTFFLTEGVVLRMSCPHT 848


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  176 bits (446), Expect = 6e-42
 Identities = 89/204 (43%), Positives = 122/204 (59%)
 Frame = +3

Query: 3    KNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPS 182
            KN+L AP L++NL+S+R+FT DN  S+EFD FGFSVK L T   ++RC+S GDLY  T  
Sbjct: 415  KNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLRTRRVILRCNSRGDLY--TLP 472

Query: 183  VSQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHV 362
            ++ P             LWH RLGHP  + +++L +   I                GKH 
Sbjct: 473  IAAPAIAAHSFLAQSSTLWHRRLGHPSSAAIQTL-HKLAILPCTKIDHSLCHACKLGKHT 531

Query: 363  KLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXX 542
            +LPF  S S T+ PF ++H D+WTSP+LSTSG +YY++ LDD+S+F WT+P+  KS    
Sbjct: 532  RLPFSRSQSSTSSPFELVHCDVWTSPVLSTSGFKYYLVVLDDFSHFCWTFPLRHKSDVHQ 591

Query: 543  XXXXXHALIKTQFATAIKSFQCDN 614
                  A + TQF ++IK FQ DN
Sbjct: 592  HIVEFVAYVTTQFGSSIKCFQADN 615


>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
          Length = 1950

 Score =  174 bits (441), Expect = 2e-41
 Identities = 90/203 (44%), Positives = 115/203 (56%)
 Frame = +3

Query: 6    NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
            N+L AP +++NL+SVR+FT DN  S EFD  GFSVKDL TG  ++RC+S GDLY  T   
Sbjct: 1053 NILVAPSIVRNLLSVRQFTRDNSCSFEFDAHGFSVKDLRTGRVILRCNSDGDLY--TMPA 1110

Query: 186  SQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVK 365
              P             LWH RLGHP  + L  L N   +                GKH +
Sbjct: 1111 GTPVAPSHAFLAASSTLWHQRLGHPAPAALERL-NKIHVVSCNKVDRSLCHSCQLGKHTR 1169

Query: 366  LPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXX 545
            LPF  S+S T  PF ++H D+WTSPI S SG  YY++ LDDYS++ W +P+GKKS+    
Sbjct: 1170 LPFSSSHSITHAPFELVHCDVWTSPINSLSGFSYYLVCLDDYSHYCWVFPLGKKSEVHQH 1229

Query: 546  XXXXHALIKTQFATAIKSFQCDN 614
                 AL KTQF+  +K  Q DN
Sbjct: 1230 IVELAALAKTQFSLPLKCVQADN 1252


>gb|EMS54188.1| Putative late blight resistance protein-like protein R1B-14 [Triticum
            urartu]
          Length = 770

 Score =  150 bits (379), Expect = 4e-34
 Identities = 81/220 (36%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
 Frame = +3

Query: 39   LVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSVSQPXXXXXXXX 218
            + +    TT + VS+EFDPFG SVKDL T   + R +S+GDLY +  + S          
Sbjct: 496  IAATNSLTTQDTVSIEFDPFGLSVKDLQTKMEIARFNSSGDLYTVDNASSSSSHAMLASV 555

Query: 219  XXXXXLWHNRLGHPGDSVLRSL-RNNNFIXXXXXXXXXXXXXXXFGKHVKLPFYPSYSCT 395
                 LWH RLGHP      +L R                     GKHV LPF  S + +
Sbjct: 556  G----LWHRRLGHPHSGTTTTLLREFQLPYDRDSHDPSLCHACQMGKHVHLPFGTSSTRS 611

Query: 396  TMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXXXXXXHALIKT 575
            + PF ++H DLWTSP  S  G +YY++ L+DYS+F+ T+PI  KS            + T
Sbjct: 612  SFPFELLHCDLWTSPTPSVFGFKYYLVLLNDYSHFICTFPIRAKSDVHALFVNFQRYVFT 671

Query: 576  QFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
             F+  I+  QCDNG+E+ N++   F   +G++  FSCP+T
Sbjct: 672  HFSLPIRFLQCDNGREFDNSRNRAFFLAHGILLRFSCPYT 711


>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score =  147 bits (372), Expect = 2e-33
 Identities = 72/176 (40%), Positives = 110/176 (62%)
 Frame = +3

Query: 3   KNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPS 182
           ++VL AP L++NL+S+R+FT DNK S+EFD FGFS+KD  T   ++RC+S G+LY  T  
Sbjct: 407 RHVLVAPSLVRNLLSIRQFTRDNKCSIEFDEFGFSIKDPQTRRVILRCNSHGELY--TLP 464

Query: 183 VSQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHV 362
            + P             LWH RLGHPG + + +L++ + I                GKH 
Sbjct: 465 AAAPSIAAHYNLATSSTLWHRRLGHPGPTAVTTLQHLSAIPRSKTNNSLCHACQ-LGKHT 523

Query: 363 KLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKS 530
           +LPF  S S T+ PF ++H D+WTS ++S SG ++Y++ +DD+++F WT+P+ +KS
Sbjct: 524 RLPFNKSTSSTSSPFELVHCDVWTSLVMSISGFKFYLVLVDDFTHFCWTFPLCQKS 579


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  147 bits (371), Expect = 3e-33
 Identities = 81/234 (34%), Positives = 112/234 (47%), Gaps = 5/234 (2%)
 Frame = +3

Query: 9    VLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPI----T 176
            +LH P    NL+S+ +F  DN         GF VK+ +TG  L++      LYP+    T
Sbjct: 380  ILHCPQAATNLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGVVENGLYPLAGCKT 439

Query: 177  PSVSQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSL-RNNNFIXXXXXXXXXXXXXXXFG 353
               S                WH+RLGHP   +  SL  +N                   G
Sbjct: 440  FHKSLTCLSTTIGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLG 499

Query: 354  KHVKLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQ 533
            K  +LPF  S   +++P A+IHSD+W SP+ ST G  YYVLF+DDYS + W YP+ +KS 
Sbjct: 500  KAKQLPFPESSRQSSVPLALIHSDVWVSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSD 559

Query: 534  XXXXXXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                      + +  F+T+IK  Q DNG E+ +NQF  F    G+    +CPHT
Sbjct: 560  VFATFVKFKTIAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHT 613


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score =  143 bits (360), Expect = 6e-32
 Identities = 73/203 (35%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
 Frame = +3

Query: 93   PFGFSVKDLVTGTHLMRCDSTGDLYPITPSV--SQPXXXXXXXXXXXXXLWHNRLGHPGD 266
            P  +  +D  T T ++RC+S+GDLYP       S               LWH RLGH G 
Sbjct: 448  PSQWDPQDYPTRTEIVRCNSSGDLYPFPADAFSSAASARTFTATESTTDLWHRRLGHIGH 507

Query: 267  SVLRSLRNNNFIXXXXXXXXXXXXXXXFGKHVKLPFYPSYSCTTMPFAIIHSDLWTSPIL 446
              L  L   + I                G+HV+LPF  S++  +  F ++H DLWTSP+ 
Sbjct: 508  DALTRLSQASVIPLPRGAAPVCHAYQ-LGRHVRLPFTSSFTRASAKFELVHCDLWTSPVP 566

Query: 447  STSGHQYYVLFLDDYSNFLWTYPIGKKSQXXXXXXXXHALIKTQFATAIKSFQCDNGKEY 626
            S  G +YY++ LDDYS+++WT+P+  KS+         A +KTQF+T I++ QCDNG+++
Sbjct: 567  SVYGFKYYLVILDDYSHYVWTFPLRLKSETFDTISHFFAFVKTQFSTTIRNIQCDNGRKF 626

Query: 627  QNNQFFDFCAKNGLVFHFSCPHT 695
             N     F   NG+    SCP+T
Sbjct: 627  DNLTARTFFLTNGVHMQMSCPYT 649


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score =  136 bits (343), Expect = 6e-30
 Identities = 84/241 (34%), Positives = 121/241 (50%), Gaps = 10/241 (4%)
 Frame = +3

Query: 3   KNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLY----- 167
           + VLH P +  NL+SV +F  DN    EF P  F VKD VT   L++      LY     
Sbjct: 87  RQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRFPAR 146

Query: 168 ----PITPSVSQPXXXXXXXXXXXXXLWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXX 335
               P     S               LWH+RLGHP D++L+ +  +  I           
Sbjct: 147 FVPSPTAFVSSSYDRSSNISLTTITTLWHSRLGHPADNILKHILTSCNISHQCHKNNVCC 206

Query: 336 XXXXFGKHVKLPFYPSYSCTTMPFAIIHSDLW-TSPILSTSGHQYYVLFLDDYSNFLWTY 512
               F K  KLPF  S S  + PFA++H+DLW  + I ST+G +Y++LF+DD+S+F W Y
Sbjct: 207 ACQ-FAKSHKLPFNVSVSRASHPFALLHADLWGPTSIPSTTGARYFILFVDDFSHFSWIY 265

Query: 513 PIGKKSQXXXXXXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPH 692
           P+  K Q         +L++ QF + I+  + DNG E++   F  + A +G+   FSCP+
Sbjct: 266 PLHSKDQALSXFIKFKSLVENQFNSRIQCLRSDNGGEFK--AFSSYLATHGIKSQFSCPY 323

Query: 693 T 695
           T
Sbjct: 324 T 324


>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  136 bits (342), Expect = 7e-30
 Identities = 79/231 (34%), Positives = 123/231 (53%), Gaps = 2/231 (0%)
 Frame = +3

Query: 9    VLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSVS 188
            VL+ P++ KNL+SV R    N+VS+EF P  F VKDL TG  L++  +  +LY    + S
Sbjct: 388  VLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447

Query: 189  QPXXXXXXXXXXXXX-LWHNRLGHPGDSVLRSLRNNNFIXXXXXXXXXXXXXXXF-GKHV 362
            Q               LWH+RLGHP  ++L S+ +N+ +               F  K  
Sbjct: 448  QAVSMFASPCSKATHCLWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSH 507

Query: 363  KLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXXX 542
            K+PF  S   ++ P   I+SD+W+SPILS   ++YYV+F+D ++ + W YP+ +KSQ   
Sbjct: 508  KVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKD 567

Query: 543  XXXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                  +L++ +F T I +   DNG E+      D+ +++G+    S PHT
Sbjct: 568  TFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHT 616


>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
          Length = 1431

 Score =  135 bits (341), Expect = 9e-30
 Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 2/232 (0%)
 Frame = +3

Query: 6    NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
            N+L+ P++ KNL+SV R    N VS+EF P  F VKDL TG  L++  +  +LY    + 
Sbjct: 354  NILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS 413

Query: 186  SQPXXXXXXXXXXXXXL-WHNRLGHPGDSVLRSLRNN-NFIXXXXXXXXXXXXXXXFGKH 359
            SQP               WH RLGHP  S+L S+ +N +                   K 
Sbjct: 414  SQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKS 473

Query: 360  VKLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXX 539
             K+PF  S   +T P   I+SD+W+SPILS   ++YYV+F+D ++ + W YP+ +KSQ  
Sbjct: 474  NKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 533

Query: 540  XXXXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                    L++ +F T I +F  DNG E+     +++ +++G+    S PHT
Sbjct: 534  ETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHT 583


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
            gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score =  135 bits (341), Expect = 9e-30
 Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 2/232 (0%)
 Frame = +3

Query: 6    NVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYPITPSV 185
            N+L+ P++ KNL+SV R    N VS+EF P  F VKDL TG  L++  +  +LY    + 
Sbjct: 389  NILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS 448

Query: 186  SQPXXXXXXXXXXXXXL-WHNRLGHPGDSVLRSLRNN-NFIXXXXXXXXXXXXXXXFGKH 359
            SQP               WH RLGHP  S+L S+ +N +                   K 
Sbjct: 449  SQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKS 508

Query: 360  VKLPFYPSYSCTTMPFAIIHSDLWTSPILSTSGHQYYVLFLDDYSNFLWTYPIGKKSQXX 539
             K+PF  S   +T P   I+SD+W+SPILS   ++YYV+F+D ++ + W YP+ +KSQ  
Sbjct: 509  NKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 568

Query: 540  XXXXXXHALIKTQFATAIKSFQCDNGKEYQNNQFFDFCAKNGLVFHFSCPHT 695
                    L++ +F T I +F  DNG E+     +++ +++G+    S PHT
Sbjct: 569  ETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHT 618