BLASTX nr result
ID: Atropa21_contig00007039
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00007039
(721 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 298 9e-79
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 295 1e-77
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 213 4e-53
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera] 213 4e-53
gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus pe... 209 7e-52
ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 202 7e-50
gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus nota... 200 3e-49
ref|XP_003554590.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 200 3e-49
gb|EPS66084.1| hypothetical protein M569_08688 [Genlisea aurea] 198 2e-48
gb|ESW35266.1| hypothetical protein PHAVU_001G220500g [Phaseolus... 197 2e-48
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ... 193 5e-47
ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 191 2e-46
ref|XP_006382238.1| hypothetical protein POPTR_0005s00240g [Popu... 187 4e-45
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|5... 187 4e-45
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 183 6e-44
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 183 6e-44
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 183 6e-44
ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citr... 183 6e-44
ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citr... 183 6e-44
ref|XP_004165586.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 183 6e-44
>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Solanum tuberosum]
Length = 744
Score = 298 bits (764), Expect = 9e-79
Identities = 164/215 (76%), Positives = 173/215 (80%), Gaps = 4/215 (1%)
Frame = -1
Query: 634 MACSSSIIGVSSIYQTNPSLELSRRPTTIPSLSLPFLNEKSHFHVHLRHGXXXXXXXXXX 455
MA SSSIIGVSSIYQTNPSLELSRRPT P LSLPF EKS+FHVH+R
Sbjct: 1 MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSTEKSNFHVHVR----LRRPFLAS 56
Query: 454 XXXTPNSSVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXXXXE----LTISKLGLPHRL 287
TPNSSVLSEEAFKGIGG GK+SLNVS++ L +SKLGLPHRL
Sbjct: 57 AVVTPNSSVLSEEAFKGIGGFGKDSLNVSESEYDSEDEVEDNESNEDELAVSKLGLPHRL 116
Query: 286 VETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSMDEEMRNT 107
VE LEKRGITQLFPIQRAVLVPAL+GRDIIARAKTGTGKTLAFGIPVLKKLS DEEMRNT
Sbjct: 117 VEALEKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPVLKKLSTDEEMRNT 176
Query: 106 QRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
QRRGRLPK+LVLAPTRELANQVEKEM+ESAPYLNT
Sbjct: 177 QRRGRLPKILVLAPTRELANQVEKEMKESAPYLNT 211
>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Solanum lycopersicum]
Length = 746
Score = 295 bits (754), Expect = 1e-77
Identities = 163/215 (75%), Positives = 173/215 (80%), Gaps = 4/215 (1%)
Frame = -1
Query: 634 MACSSSIIGVSSIYQTNPSLELSRRPTTIPSLSLPFLNEKSHFHVHLRHGXXXXXXXXXX 455
MA SSSIIGVSSIYQTNPSLELSRRPT P LSLPF EKS+FHVH+R
Sbjct: 1 MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSIEKSNFHVHVR----LRRPFLAS 56
Query: 454 XXXTPNSSVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXXXXE----LTISKLGLPHRL 287
TP SSVLSEEAFKGIGG GK+SLNVS++ L++SKLGLPHRL
Sbjct: 57 AVVTPTSSVLSEEAFKGIGGFGKDSLNVSESEYDSEDEVEDNESNEDELSVSKLGLPHRL 116
Query: 286 VETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSMDEEMRNT 107
V+ LEKRGITQLFPIQRAVLVPAL+GRDIIARAKTGTGKTLAFGIPVLKKLS DEEMRNT
Sbjct: 117 VDALEKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPVLKKLSTDEEMRNT 176
Query: 106 QRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
QRRGRLPKVLVLAPTRELANQVEKEM+ESAPYLNT
Sbjct: 177 QRRGRLPKVLVLAPTRELANQVEKEMKESAPYLNT 211
>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
protein product [Vitis vinifera]
Length = 764
Score = 213 bits (543), Expect = 4e-53
Identities = 132/226 (58%), Positives = 159/226 (70%), Gaps = 18/226 (7%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIPSLSLPFLNEKSHFHVH------------LRHGX 482
+SSIIGVSS+YQT +LELSRR T+ SLSLPF ++K+H V LR
Sbjct: 2 ASSIIGVSSVYQTT-ALELSRR-TSAHSLSLPF-SDKTHLGVFKAPNTRVLSDASLRRSF 58
Query: 481 XXXXXXXXXXXXTPNSSVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXXXXE-----LT 317
TPNS VLSEEAFKG+GG K+ L+V+ T L
Sbjct: 59 KQGISFVPSAIATPNS-VLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117
Query: 316 ISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKK 137
+++LGLP RLVE+LE+RGIT LFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIP++K+
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKR 177
Query: 136 LSMDEEMRNTQRR-GRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
LS D+E R +QRR GRLP+VLVLAPTRELA QVEKE++ESAPYL+T
Sbjct: 178 LSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLST 223
>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
Length = 786
Score = 213 bits (543), Expect = 4e-53
Identities = 132/226 (58%), Positives = 159/226 (70%), Gaps = 18/226 (7%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIPSLSLPFLNEKSHFHVH------------LRHGX 482
+SSIIGVSS+YQT +LELSRR T+ SLSLPF ++K+H V LR
Sbjct: 2 ASSIIGVSSVYQTT-ALELSRR-TSAHSLSLPF-SDKTHLGVFKAPNTRVLSDASLRRSF 58
Query: 481 XXXXXXXXXXXXTPNSSVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXXXXE-----LT 317
TPNS VLSEEAFKG+GG K+ L+V+ T L
Sbjct: 59 KQGISFVPSAIATPNS-VLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117
Query: 316 ISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKK 137
+++LGLP RLVE+LE+RGIT LFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIP++K+
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKR 177
Query: 136 LSMDEEMRNTQRR-GRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
LS D+E R +QRR GRLP+VLVLAPTRELA QVEKE++ESAPYL+T
Sbjct: 178 LSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLST 223
>gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus persica]
Length = 766
Score = 209 bits (532), Expect = 7e-52
Identities = 131/223 (58%), Positives = 153/223 (68%), Gaps = 16/223 (7%)
Frame = -1
Query: 622 SSIIGVSSIYQTNPSLELSRRP----------TTIPSLSLPFLNEKSHFHVHLR--HGXX 479
+SIIGVSSIY P EL RR T+ PSLSL F E+ HF+ LR G
Sbjct: 2 TSIIGVSSIYPQTPCSELYRRAAASTTTTTATTSSPSLSLAF-PERPHFNSVLRAKSGLV 60
Query: 478 XXXXXXXXXXXTPNSSVLSEEAFKGIGGLGKNSLNVSQ---TXXXXXXXXXXXXELTISK 308
TPNS VLSEEAFKG+GG K+SL+ + EL +SK
Sbjct: 61 RQSSLVASAIATPNS-VLSEEAFKGLGGFSKDSLDSDSEYDSETEPASAAGDDDELALSK 119
Query: 307 LGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSM 128
LGLP RLV++LEKRGI+ LFPIQRAVLVPAL+GRDIIARAKTGTGKTLAFGIP+LK+L+
Sbjct: 120 LGLPQRLVDSLEKRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPILKRLTE 179
Query: 127 DEEMRNTQRR-GRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
D+E R++ RR G LP+VLVLAPTRELA QVEKE++ESAPYLNT
Sbjct: 180 DDEQRSSHRRTGYLPRVLVLAPTRELAKQVEKEIKESAPYLNT 222
>ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Glycine max]
Length = 771
Score = 202 bits (515), Expect = 7e-50
Identities = 126/219 (57%), Positives = 146/219 (66%), Gaps = 12/219 (5%)
Frame = -1
Query: 622 SSIIGVSSIYQTNPSLELSRRPTTIPSLS---LPFLNEKSHFH----VHLRHGXXXXXXX 464
+SIIGVSSIYQT PSLEL +RP T S S L L+ KSHF+ H RH
Sbjct: 2 ASIIGVSSIYQT-PSLELYQRPNTAASTSSVRLQCLDSKSHFNNVLRAHQRHSTGPGLKP 60
Query: 463 XXXXXXT-----PNSSVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXXXXELTISKLGL 299
PNSS+LSEEAFKG+G + S + L ISKL L
Sbjct: 61 TPTTFVPSAVATPNSSLLSEEAFKGLGRDFDEFDHASDSDSAAESVHPDE--LDISKLDL 118
Query: 298 PHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSMDEE 119
P RLVE+L+ RGITQLFPIQRAVLVPAL+GRDIIARAKTGTGKTLAFGIP++K L+ DE
Sbjct: 119 PSRLVESLQSRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLTEDEH 178
Query: 118 MRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
+ +R GRLP+ LVLAPTRELA QVEKE++ESAPYL+T
Sbjct: 179 APSHRRSGRLPRFLVLAPTRELAKQVEKEIKESAPYLST 217
>gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
Length = 810
Score = 200 bits (509), Expect = 3e-49
Identities = 130/220 (59%), Positives = 152/220 (69%), Gaps = 13/220 (5%)
Frame = -1
Query: 622 SSIIGVSSIYQTNPSLELSRR---PTTIPSLSLPFLNEKSHFHVHLRH---GXXXXXXXX 461
+SIIGVSSIYQT PSLE RR T+ PS SLPF +KSHF+ LR
Sbjct: 2 ASIIGVSSIYQT-PSLEPYRRVAAATSSPS-SLPF-PDKSHFNSVLRAYNCKSGSSSRLV 58
Query: 460 XXXXXTPNSSVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXXXXE------LTISKLGL 299
TPNS VLSEEAFKG+G K+S + + L ISKLGL
Sbjct: 59 ASAIATPNS-VLSEEAFKGLGDFSKDSFSGDEEDDYESEEGEPGEASVDDDELAISKLGL 117
Query: 298 PHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSMDEE 119
P RLV++LEKRGIT LFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIP++K+L+ D+E
Sbjct: 118 PQRLVDSLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLTEDDE 177
Query: 118 MRNTQRR-GRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
R ++RR RLPK LVLAPTRELA QVEKE++ESAP+LNT
Sbjct: 178 QRGSRRRSSRLPKGLVLAPTRELAKQVEKEIKESAPHLNT 217
>ref|XP_003554590.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Glycine max]
Length = 771
Score = 200 bits (509), Expect = 3e-49
Identities = 128/218 (58%), Positives = 148/218 (67%), Gaps = 10/218 (4%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIP--SLSLPFLNEKSHFHVHLRH-------GXXXX 473
+SSIIGVSSIYQT P LEL +RP+T S+ L L+ KSHF+ LR G
Sbjct: 2 ASSIIGVSSIYQT-PPLELYQRPSTASTSSVRLQSLDSKSHFNNLLRAHRHSTGPGLKPT 60
Query: 472 XXXXXXXXXTPNSSVLSEEAFKGIGGLGKNSLNVSQ-TXXXXXXXXXXXXELTISKLGLP 296
TPNSS+LSEEAFKG+ + N Q T EL ISKL LP
Sbjct: 61 PSFVPSAVATPNSSLLSEEAFKGLAR--EFDQNDDQFTRASSAAESVNPDELDISKLDLP 118
Query: 295 HRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSMDEEM 116
RLVE+L RGITQLFPIQRAVLVPAL+GRDIIARAKTGTGKTLAFGIP++K L+ DE
Sbjct: 119 SRLVESLRSRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLTEDEHA 178
Query: 115 RNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
+ +R GRLP+ LVLAPTRELA QVEKE++ESAPYL+T
Sbjct: 179 PSHRRSGRLPRFLVLAPTRELAKQVEKEIKESAPYLST 216
>gb|EPS66084.1| hypothetical protein M569_08688 [Genlisea aurea]
Length = 775
Score = 198 bits (503), Expect = 2e-48
Identities = 127/219 (57%), Positives = 142/219 (64%), Gaps = 8/219 (3%)
Frame = -1
Query: 634 MACSSSIIGVSSI--YQTNPSLELSRRPTTIPSLSLPFL---NEKSHFHVHLRHGXXXXX 470
MACSSS +GVSSI +P+ R T+ LSL F N F +R G
Sbjct: 1 MACSSSTVGVSSICPIAAHPNDYAKR---TVYHLSLHFSAAHNPLRAFSSGVRLGSASGS 57
Query: 469 XXXXXXXXT---PNSSVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXXXXELTISKLGL 299
PNSSVLSEEAFKG+GGLG + + EL I+KLGL
Sbjct: 58 SSNSFSASAVFTPNSSVLSEEAFKGLGGLG-----IEEDGVLRDVESVSVDELDITKLGL 112
Query: 298 PHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSMDEE 119
RLVETLEKRGITQLFPIQRAVLVPAL+GRDIIARAKTGTGKTLAFGIP+LK L +
Sbjct: 113 SQRLVETLEKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPILKGLDEASQ 172
Query: 118 MRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
R + RRGRLPKVLVLAPTRELA QVEKE +ESAPYL+T
Sbjct: 173 ERGSLRRGRLPKVLVLAPTRELAKQVEKEFKESAPYLST 211
>gb|ESW35266.1| hypothetical protein PHAVU_001G220500g [Phaseolus vulgaris]
Length = 776
Score = 197 bits (502), Expect = 2e-48
Identities = 123/221 (55%), Positives = 146/221 (66%), Gaps = 14/221 (6%)
Frame = -1
Query: 622 SSIIGVSSIYQTNPSLELSRRP--TTIPSLSLPFLNEKSHFHVHLRH-----------GX 482
+S+IGVSSIYQT P+LEL RP T+ ++ L L+ KSHF+ LR G
Sbjct: 2 ASLIGVSSIYQT-PTLELYHRPNATSTSAVRLQCLDSKSHFNNLLRAHRHSPGPTFKTGL 60
Query: 481 XXXXXXXXXXXXTPNSSVLSEEAFKGIGG-LGKNSLNVSQTXXXXXXXXXXXXELTISKL 305
TPNSS+LSEEAFKG+G + EL ISKL
Sbjct: 61 KPTPTFLPSAVATPNSSLLSEEAFKGLGRHFDQTDHEFQDASDSHTAEPLNSDELDISKL 120
Query: 304 GLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSMD 125
LP RLV++L+ RGITQLFPIQRAVLVPAL GRDIIARAKTGTGKTLAFGIPV+K L+ D
Sbjct: 121 DLPSRLVDSLQNRGITQLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPVIKGLTED 180
Query: 124 EEMRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
+ + +R GRLP+VLVLAPTRELA QVEKE++ESAPYL+T
Sbjct: 181 GDETSLRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLST 221
>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 772
Score = 193 bits (490), Expect = 5e-47
Identities = 121/227 (53%), Positives = 153/227 (67%), Gaps = 19/227 (8%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIPSLSLPFLNEKSHFH---------VHLRHGXXXX 473
+SS++GVSSI+ T PS+ELS R T +LS+P +K HF+ + +HG
Sbjct: 3 TSSVLGVSSIFHT-PSVELSSRKTNSTTLSIP-TTDKPHFNSLVLQSCSLYNNKHGHGHG 60
Query: 472 XXXXXXXXXTPNSSVLSEEAFKGIGGL------GKNSLNVSQ---TXXXXXXXXXXXXEL 320
+S+LSEEAFKG+GG +++ +VS EL
Sbjct: 61 HSSFVTSAIAAPNSILSEEAFKGLGGRLSDFDEDEDNDDVSSGGYEDDGAGESLPDDDEL 120
Query: 319 TISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLK 140
ISKLGLP RLVE+LEKRGIT LFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIP++K
Sbjct: 121 AISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIK 180
Query: 139 KLSMDEEMRNTQRR-GRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
++ D+ +++QRR GRLP+VLVLAPTRELA QVEKE+ ESAPYL+T
Sbjct: 181 CITEDD--KSSQRRTGRLPRVLVLAPTRELAKQVEKEINESAPYLST 225
>ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 772
Score = 191 bits (486), Expect = 2e-46
Identities = 124/228 (54%), Positives = 147/228 (64%), Gaps = 21/228 (9%)
Frame = -1
Query: 622 SSIIGVSSIYQTNPSLELSRRP-----------TTIPS-----LSLPFLN-EKSHFHVHL 494
+SIIGVSSIY P EL +R TT S +SL F ++ HF+ L
Sbjct: 2 TSIIGVSSIYYQTPC-ELYKRAAAPLAAATTATTTATSSRSGGVSLAFPERQRGHFNTVL 60
Query: 493 RHGXXXXXXXXXXXXXTPNSSVLSEEAFKGIGGLGKNSLN----VSQTXXXXXXXXXXXX 326
R TPNS VLSEEAFKG+GG K L+
Sbjct: 61 R----ARSVFATQAIATPNS-VLSEEAFKGLGGFSKEELDSESEYESESEVAEPAVGSKD 115
Query: 325 ELTISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPV 146
EL +SKLGLP RLV++LE+RGI+ LFPIQRAVLVPAL+GRDIIARAKTGTGKTLAFGIP+
Sbjct: 116 ELALSKLGLPQRLVDSLERRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPI 175
Query: 145 LKKLSMDEEMRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
LK+L+ D+E R ++R G LP+VLVLAPTRELA QVEKE++ESAPYLNT
Sbjct: 176 LKRLTEDDEQRGSRRSGYLPRVLVLAPTRELAKQVEKEIKESAPYLNT 223
>ref|XP_006382238.1| hypothetical protein POPTR_0005s00240g [Populus trichocarpa]
gi|550337589|gb|ERP60035.1| hypothetical protein
POPTR_0005s00240g [Populus trichocarpa]
Length = 731
Score = 187 bits (474), Expect = 4e-45
Identities = 119/241 (49%), Positives = 152/241 (63%), Gaps = 30/241 (12%)
Frame = -1
Query: 634 MACSSSIIGVSSIYQTNPSLELSRRPTT------IP---SLSLPFLNEKS-HFH------ 503
MA + ++IGVSS++ + + R TT IP S S PFL+E+ HF+
Sbjct: 1 MASTCTVIGVSSLFPSTTTNSCRRATTTTHSSPAIPYPSSSSAPFLSERPPHFNSLIAKT 60
Query: 502 -VHLRHGXXXXXXXXXXXXXT----PNSSVLSEEAFKGIGGLGKNSLNVSQ--------T 362
+ +H + PNS +LSEEAFKG+ G +V +
Sbjct: 61 QLSFKHSLIINNSSSSFSPPSAIASPNS-ILSEEAFKGLDGFSDFEADVDAGGADVDYAS 119
Query: 361 XXXXXXXXXXXXELTISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKT 182
EL +SKLGLPHRLV+TL+ RGIT LFPIQRAVL+PAL+GRD+IARAKT
Sbjct: 120 SETEPSSNTSEDELDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAKT 179
Query: 181 GTGKTLAFGIPVLKKLSMDEEMRNTQRR-GRLPKVLVLAPTRELANQVEKEMRESAPYLN 5
GTGKTLAFGIP++K+L+ D E+R +QRR GRLPKVLVLAPTRELA QVEKE++ESAPYL+
Sbjct: 180 GTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYLS 239
Query: 4 T 2
+
Sbjct: 240 S 240
>ref|XP_002330044.1| predicted protein [Populus trichocarpa]
gi|566168507|ref|XP_006382239.1| hypothetical protein
POPTR_0005s00240g [Populus trichocarpa]
gi|550337590|gb|ERP60036.1| hypothetical protein
POPTR_0005s00240g [Populus trichocarpa]
Length = 775
Score = 187 bits (474), Expect = 4e-45
Identities = 119/241 (49%), Positives = 152/241 (63%), Gaps = 30/241 (12%)
Frame = -1
Query: 634 MACSSSIIGVSSIYQTNPSLELSRRPTT------IP---SLSLPFLNEKS-HFH------ 503
MA + ++IGVSS++ + + R TT IP S S PFL+E+ HF+
Sbjct: 1 MASTCTVIGVSSLFPSTTTNSCRRATTTTHSSPAIPYPSSSSAPFLSERPPHFNSLIAKT 60
Query: 502 -VHLRHGXXXXXXXXXXXXXT----PNSSVLSEEAFKGIGGLGKNSLNVSQ--------T 362
+ +H + PNS +LSEEAFKG+ G +V +
Sbjct: 61 QLSFKHSLIINNSSSSFSPPSAIASPNS-ILSEEAFKGLDGFSDFEADVDAGGADVDYAS 119
Query: 361 XXXXXXXXXXXXELTISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKT 182
EL +SKLGLPHRLV+TL+ RGIT LFPIQRAVL+PAL+GRD+IARAKT
Sbjct: 120 SETEPSSNTSEDELDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAKT 179
Query: 181 GTGKTLAFGIPVLKKLSMDEEMRNTQRR-GRLPKVLVLAPTRELANQVEKEMRESAPYLN 5
GTGKTLAFGIP++K+L+ D E+R +QRR GRLPKVLVLAPTRELA QVEKE++ESAPYL+
Sbjct: 180 GTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYLS 239
Query: 4 T 2
+
Sbjct: 240 S 240
>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 766
Score = 183 bits (464), Expect = 6e-44
Identities = 119/233 (51%), Positives = 146/233 (62%), Gaps = 25/233 (10%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIPS------LSLPFLNEKSHFHVHL---------- 494
SS+++GVSS P LE+S + TT P+ LSLP L +KSHF+ +
Sbjct: 3 SSTVLGVSS----TPYLEVSSKRTTPPATTSSALLSLP-LADKSHFNALIATSSVAKPLG 57
Query: 493 -RHGXXXXXXXXXXXXXTPNS-----SVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXX 332
R+G P++ +VLSEEAFK +G +NS ++ +
Sbjct: 58 FRNGGGSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQT 117
Query: 331 XXE---LTISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLA 161
+ L ISKLGLP RL E+LEKRGIT LFPIQRAV PAL GRD+IARAKTGTGKTLA
Sbjct: 118 VSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLA 177
Query: 160 FGIPVLKKLSMDEEMRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
FGIP+LK+L+ E + RR RLPKVLVLAPTRELA QVEKE++ESAPYLNT
Sbjct: 178 FGIPILKRLTEGYEQAISLRRSRLPKVLVLAPTRELARQVEKEIKESAPYLNT 230
>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 767
Score = 183 bits (464), Expect = 6e-44
Identities = 119/233 (51%), Positives = 146/233 (62%), Gaps = 25/233 (10%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIPS------LSLPFLNEKSHFHVHL---------- 494
SS+++GVSS P LE+S + TT P+ LSLP L +KSHF+ +
Sbjct: 3 SSTVLGVSS----TPYLEVSSKRTTPPATTSSALLSLP-LADKSHFNALIATSSVAKPLG 57
Query: 493 -RHGXXXXXXXXXXXXXTPNS-----SVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXX 332
R+G P++ +VLSEEAFK +G +NS ++ +
Sbjct: 58 FRNGGGSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQT 117
Query: 331 XXE---LTISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLA 161
+ L ISKLGLP RL E+LEKRGIT LFPIQRAV PAL GRD+IARAKTGTGKTLA
Sbjct: 118 VSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLA 177
Query: 160 FGIPVLKKLSMDEEMRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
FGIP+LK+L+ E + RR RLPKVLVLAPTRELA QVEKE++ESAPYLNT
Sbjct: 178 FGIPILKRLTEGYEQAISLRRSRLPKVLVLAPTRELARQVEKEIKESAPYLNT 230
>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 768
Score = 183 bits (464), Expect = 6e-44
Identities = 119/233 (51%), Positives = 146/233 (62%), Gaps = 25/233 (10%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIPS------LSLPFLNEKSHFHVHL---------- 494
SS+++GVSS P LE+S + TT P+ LSLP L +KSHF+ +
Sbjct: 3 SSTVLGVSS----TPYLEVSSKRTTPPATTSSALLSLP-LADKSHFNALIATSSVAKPLG 57
Query: 493 -RHGXXXXXXXXXXXXXTPNS-----SVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXX 332
R+G P++ +VLSEEAFK +G +NS ++ +
Sbjct: 58 FRNGGGSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQT 117
Query: 331 XXE---LTISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLA 161
+ L ISKLGLP RL E+LEKRGIT LFPIQRAV PAL GRD+IARAKTGTGKTLA
Sbjct: 118 VSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLA 177
Query: 160 FGIPVLKKLSMDEEMRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
FGIP+LK+L+ E + RR RLPKVLVLAPTRELA QVEKE++ESAPYLNT
Sbjct: 178 FGIPILKRLTEGYEQAISLRRSRLPKVLVLAPTRELARQVEKEIKESAPYLNT 230
>ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
gi|557525870|gb|ESR37176.1| hypothetical protein
CICLE_v10027858mg [Citrus clementina]
Length = 780
Score = 183 bits (464), Expect = 6e-44
Identities = 119/233 (51%), Positives = 146/233 (62%), Gaps = 25/233 (10%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIPS------LSLPFLNEKSHFHVHL---------- 494
SS+++GVSS P LE+S + TT P+ LSLP L +KSHF+ +
Sbjct: 3 SSTVLGVSS----TPYLEVSSKRTTPPATTSSALLSLP-LADKSHFNALIATSSVAKPLG 57
Query: 493 -RHGXXXXXXXXXXXXXTPNS-----SVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXX 332
R+G P++ +VLSEEAFK +G +NS ++ +
Sbjct: 58 FRNGGGSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQT 117
Query: 331 XXE---LTISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLA 161
+ L ISKLGLP RL E+LEKRGIT LFPIQRAV PAL GRD+IARAKTGTGKTLA
Sbjct: 118 VSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLA 177
Query: 160 FGIPVLKKLSMDEEMRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
FGIP+LK+L+ E + RR RLPKVLVLAPTRELA QVEKE++ESAPYLNT
Sbjct: 178 FGIPILKRLTEGYEQAISLRRSRLPKVLVLAPTRELARQVEKEIKESAPYLNT 230
>ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
gi|567862566|ref|XP_006423937.1| hypothetical protein
CICLE_v10027858mg [Citrus clementina]
gi|557525869|gb|ESR37175.1| hypothetical protein
CICLE_v10027858mg [Citrus clementina]
gi|557525871|gb|ESR37177.1| hypothetical protein
CICLE_v10027858mg [Citrus clementina]
Length = 779
Score = 183 bits (464), Expect = 6e-44
Identities = 119/233 (51%), Positives = 146/233 (62%), Gaps = 25/233 (10%)
Frame = -1
Query: 625 SSSIIGVSSIYQTNPSLELSRRPTTIPS------LSLPFLNEKSHFHVHL---------- 494
SS+++GVSS P LE+S + TT P+ LSLP L +KSHF+ +
Sbjct: 3 SSTVLGVSS----TPYLEVSSKRTTPPATTSSALLSLP-LADKSHFNALIATSSVAKPLG 57
Query: 493 -RHGXXXXXXXXXXXXXTPNS-----SVLSEEAFKGIGGLGKNSLNVSQTXXXXXXXXXX 332
R+G P++ +VLSEEAFK +G +NS ++ +
Sbjct: 58 FRNGGGSGFGFKQSLTFVPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQT 117
Query: 331 XXE---LTISKLGLPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLA 161
+ L ISKLGLP RL E+LEKRGIT LFPIQRAV PAL GRD+IARAKTGTGKTLA
Sbjct: 118 VSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLA 177
Query: 160 FGIPVLKKLSMDEEMRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
FGIP+LK+L+ E + RR RLPKVLVLAPTRELA QVEKE++ESAPYLNT
Sbjct: 178 FGIPILKRLTEGYEQAISLRRSRLPKVLVLAPTRELARQVEKEIKESAPYLNT 230
>ref|XP_004165586.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like, partial [Cucumis sativus]
Length = 726
Score = 183 bits (464), Expect = 6e-44
Identities = 113/220 (51%), Positives = 144/220 (65%), Gaps = 13/220 (5%)
Frame = -1
Query: 622 SSIIGVSSIYQTNPSLELSRRP----TTIPSLSLPFLNEKSHFHVHLRHGXXXXXXXXXX 455
+S++GV++I P+L+L RR T P+ SL F+ +KSH + L+
Sbjct: 2 ASLLGVTAILHA-PNLDLYRRTGTTATASPTPSLSFV-DKSHL-IALKVQTCFSGSSRRN 58
Query: 454 XXXTPNS------SVLSEEAFKGIGGLGKNSLN---VSQTXXXXXXXXXXXXELTISKLG 302
+S S+LSEEAF+ G ++SL+ + EL ISKL
Sbjct: 59 LSGFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAADDDELAISKLN 118
Query: 301 LPHRLVETLEKRGITQLFPIQRAVLVPALDGRDIIARAKTGTGKTLAFGIPVLKKLSMDE 122
LP RL + L+KRGIT LFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIP+LKKL+ D+
Sbjct: 119 LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDD 178
Query: 121 EMRNTQRRGRLPKVLVLAPTRELANQVEKEMRESAPYLNT 2
E R+ +RR RLP+VLVL PTRELA QVEKE++ESAPYLNT
Sbjct: 179 ESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNT 218