BLASTX nr result
ID: Atropa21_contig00006913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00006913
(1680 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma... 549 e-153
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma... 530 e-147
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly... 530 e-147
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l... 274 1e-70
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr... 265 4e-68
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr... 265 4e-68
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr... 265 4e-68
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l... 263 2e-67
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 258 4e-66
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma... 258 4e-66
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma... 258 4e-66
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 247 1e-62
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric... 239 3e-60
emb|CBI35661.3| unnamed protein product [Vitis vinifera] 234 8e-59
ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal doma... 233 2e-58
ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal doma... 233 2e-58
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma... 231 9e-58
ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal doma... 228 6e-57
ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphat... 226 2e-56
ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal doma... 226 3e-56
>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum tuberosum]
Length = 1218
Score = 549 bits (1414), Expect = e-153
Identities = 307/432 (71%), Positives = 341/432 (78%), Gaps = 13/432 (3%)
Frame = -1
Query: 1305 MEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNSASRVW 1126
MEECN V+DVEEGEISDSASVEEISEDAF RQDPPT + + +RVW
Sbjct: 1 MEECNRVEDVEEGEISDSASVEEISEDAFNRQDPPT-TTKIKIASNENQNQNSTTTTRVW 59
Query: 1125 TMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSN----SKQSEMEKVVID 958
TMRD YKYPISRDYARGLYNLAWAQAVQNKPLDELFVMT+D+SN + + KV+ID
Sbjct: 60 TMRDAYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCANANANVESKVIID 119
Query: 957 VE-DDDLKPRXXXXXXXXEIDLDADVLD-SKEANFIKEQLQSVTLDETDKSFPVVCSKLQ 784
V+ DDD K ++D VL+ KEANF++EQLQSVTLDET KSF +VCSKLQ
Sbjct: 120 VDVDDDAKEEGELEEGEIDLDAADLVLNFGKEANFVREQLQSVTLDETHKSFSMVCSKLQ 179
Query: 783 SSLDSLGELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQI 604
+SL +LGEL +S ND LIQLFMTAL+TINSVF SMNQ K++N DILSRLL HAK+Q+
Sbjct: 180 TSLLALGELALSQDKNDILIQLFMTALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQL 239
Query: 603 PALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKV---LDMNVSHKSSENANLDF 433
PALLSSEQLKEVDAVILS+NQSAV SN +DND+ NGIKV LD VSHKSSENAN DF
Sbjct: 240 PALLSSEQLKEVDAVILSINQSAVFSN-TQDNDKVNGIKVVELLDKKVSHKSSENANQDF 298
Query: 432 NSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPT 253
++NKYD AVS KSSGLKEQSVSFES KP LANSKA+G+SIPLLDLHKDHDEDTLPSPT
Sbjct: 299 TAVNKYDLGAVSIKSSGLKEQSVSFESVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPT 358
Query: 252 RKIGPQFPVAIASTQAQGTVKRESPIF----EKGNSLLHSYETDALKIVSSYQQKFDRSS 85
R+IGPQFPVA A TQA G VK + PIF EKGNSLLH YETDALK VSSYQQKF RSS
Sbjct: 359 REIGPQFPVAKA-TQAHGMVKLDLPIFAGSLEKGNSLLHPYETDALKAVSSYQQKFGRSS 417
Query: 84 LFVSKKLPSPTP 49
LFVS+ LPSPTP
Sbjct: 418 LFVSENLPSPTP 429
>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum lycopersicum]
Length = 1211
Score = 530 bits (1364), Expect = e-147
Identities = 298/430 (69%), Positives = 332/430 (77%), Gaps = 11/430 (2%)
Frame = -1
Query: 1305 MEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNS--ASR 1132
MEECN V+D EEGEISDSASVEEISEDAF RQDPPT +S + NS A+R
Sbjct: 1 MEECNRVEDAEEGEISDSASVEEISEDAFNRQDPPTTSTTSKIKIASNENQNQNSTTATR 60
Query: 1131 VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQSEMEKVVIDVE 952
VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMT+D+SN + KV+IDV+
Sbjct: 61 VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCANGESKVIIDVD 120
Query: 951 -DDDLKPRXXXXXXXXEID-LDADVLDSKEANFIKEQLQSVTLDETDKSFPVVCSKLQSS 778
DDD K ++D D V KEANFI+EQLQSVTLDET KSF +VCSKLQ+S
Sbjct: 121 VDDDAKEEGELEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTS 180
Query: 777 LDSLGELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPA 598
L +LGEL +S ND LIQLFMTAL+TINSVF SMN K++N DILSRLL +AK+Q+PA
Sbjct: 181 LLALGELALSQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPA 240
Query: 597 LLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKV---LDMNVSHKSSENANLDFNS 427
LLSSEQLKE+DA+ILS+N S VSSN +DND NGI V LDM SHKSSENAN DF S
Sbjct: 241 LLSSEQLKELDALILSINHSLVSSN-TQDNDTVNGINVVQLLDMKDSHKSSENANQDFTS 299
Query: 426 LNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRK 247
+NKYD VS KSSGLKEQSVS ES KP L NSKA+G+S PLLDLHKDHDEDTLPSPTR+
Sbjct: 300 VNKYDLGDVSIKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQ 359
Query: 246 IGPQFPVAIASTQAQGTVKRESPIF----EKGNSLLHSYETDALKIVSSYQQKFDRSSLF 79
IGPQFP +TQ G VK + PIF +KGNSLLH YETDALK VSSYQQKF RSSLF
Sbjct: 360 IGPQFP----ATQTHGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLF 415
Query: 78 VSKKLPSPTP 49
VS+ LPSPTP
Sbjct: 416 VSENLPSPTP 425
>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
Length = 1227
Score = 530 bits (1364), Expect = e-147
Identities = 298/430 (69%), Positives = 332/430 (77%), Gaps = 11/430 (2%)
Frame = -1
Query: 1305 MEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNS--ASR 1132
MEECN V+D EEGEISDSASVEEISEDAF RQDPPT +S + NS A+R
Sbjct: 1 MEECNRVEDAEEGEISDSASVEEISEDAFNRQDPPTTSTTSKIKIASNENQNQNSTTATR 60
Query: 1131 VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQSEMEKVVIDVE 952
VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMT+D+SN + KV+IDV+
Sbjct: 61 VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCANGESKVIIDVD 120
Query: 951 -DDDLKPRXXXXXXXXEID-LDADVLDSKEANFIKEQLQSVTLDETDKSFPVVCSKLQSS 778
DDD K ++D D V KEANFI+EQLQSVTLDET KSF +VCSKLQ+S
Sbjct: 121 VDDDAKEEGELEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTS 180
Query: 777 LDSLGELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPA 598
L +LGEL +S ND LIQLFMTAL+TINSVF SMN K++N DILSRLL +AK+Q+PA
Sbjct: 181 LLALGELALSQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPA 240
Query: 597 LLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKV---LDMNVSHKSSENANLDFNS 427
LLSSEQLKE+DA+ILS+N S VSSN +DND NGI V LDM SHKSSENAN DF S
Sbjct: 241 LLSSEQLKELDALILSINHSLVSSN-TQDNDTVNGINVVQLLDMKDSHKSSENANQDFTS 299
Query: 426 LNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRK 247
+NKYD VS KSSGLKEQSVS ES KP L NSKA+G+S PLLDLHKDHDEDTLPSPTR+
Sbjct: 300 VNKYDLGDVSIKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQ 359
Query: 246 IGPQFPVAIASTQAQGTVKRESPIF----EKGNSLLHSYETDALKIVSSYQQKFDRSSLF 79
IGPQFP +TQ G VK + PIF +KGNSLLH YETDALK VSSYQQKF RSSLF
Sbjct: 360 IGPQFP----ATQTHGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLF 415
Query: 78 VSKKLPSPTP 49
VS+ LPSPTP
Sbjct: 416 VSENLPSPTP 425
>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao]
Length = 1290
Score = 274 bits (700), Expect = 1e-70
Identities = 198/490 (40%), Positives = 268/490 (54%), Gaps = 61/490 (12%)
Frame = -1
Query: 1335 KEKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXX 1156
K+ ++TL EM ++ V+DVEEGEISDSAS+EEISE+ F +QD K++ + +
Sbjct: 15 KKNEETLGEMGKDETKVEDVEEGEISDSASIEEISEEDFNKQD--VKILKESKS---SKG 69
Query: 1155 XXXNSASRVWTMRDVYKYP-ISRDYARGLYNLAWAQAVQNKPLDELFV------MTTDDS 997
NS SRVWTM+D+ KYP + R YA GLYN AWAQAVQNKPL+E+FV ++
Sbjct: 70 GEANSNSRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNEIFVKDFEQPQQDENK 129
Query: 996 NSKQSEME--------------------KVVIDVEDDDLK--------PRXXXXXXXXEI 901
NSK+S KVVID + +D + EI
Sbjct: 130 NSKRSSPSSSVASVNSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNLDKEEGELEEGEI 189
Query: 900 DLDAD----VLDS------------KEANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDS 769
DLD++ VL S K AN I+ L+ VT+ E +KSF VCS+L ++L+S
Sbjct: 190 DLDSEPKEKVLSSEDGNVGNSDELEKRANLIRGVLEGVTVIEAEKSFEGVCSRLHNALES 249
Query: 768 LGE--LDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPAL 595
L L+ SVP D LIQL A INS F ++N ++KE+N ILSRLL K P+L
Sbjct: 250 LRALILECSVPAKDALIQL---AFGAINSAFVALNCNSKEQNVAILSRLLSIVKGHDPSL 306
Query: 594 LSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKY 415
+++KE+D +++S+N A + + E+D +G+ D + EN D NK
Sbjct: 307 FPPDKMKEIDVMLISLNSPARAIDTEKDMKVVDGVNKKDPDA---LPENICHDLTVTNKL 363
Query: 414 DSDA---VSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKI 244
S A ++ K + L E+ KP + N + RG+S+PLLDLHKDHD D+LPSPTR+
Sbjct: 364 PSSAKFVINNKPNALT------ETLKPGVPNFRNRGISLPLLDLHKDHDADSLPSPTRET 417
Query: 243 GPQFPVAIASTQAQGTVKRESPIFEKGN-----SLLHSYETDALKIVSSYQQKFDRSSLF 79
P PV T VK + KG+ LH YETDALK S+YQQKF + S F
Sbjct: 418 TPCLPVNKPLTSGDVMVK-SGFMTGKGSHDAEGDKLHPYETDALKAFSTYQQKFGQGSFF 476
Query: 78 VSKKLPSPTP 49
S +LPSPTP
Sbjct: 477 SSDRLPSPTP 486
>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3-like
[Citrus sinensis] gi|557541056|gb|ESR52100.1|
hypothetical protein CICLE_v10030535mg [Citrus
clementina]
Length = 1234
Score = 265 bits (677), Expect = 4e-68
Identities = 190/454 (41%), Positives = 261/454 (57%), Gaps = 42/454 (9%)
Frame = -1
Query: 1284 QDVEEGEISDSASVEEISEDAFK-RQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDVY 1108
+DVEEGEISD+ASVEEISE+ FK +Q+ KVV +A+RVWTMRD+Y
Sbjct: 3 KDVEEGEISDTASVEEISEEDFKIKQEEVVKVVKET---KPIKVGGGEAAARVWTMRDLY 59
Query: 1107 -KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQSE-------------- 979
KYP I R Y GL+NLAWAQAVQNKPL+E+FVM + D SK+S
Sbjct: 60 NKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSSPASSVASVNSGAAA 119
Query: 978 -------MEKVVIDVEDDDL-KPRXXXXXXXXEIDLDADVLDSKEANFIKEQLQSVTLDE 823
+EKVVID D++ K E+DL+++ + K + +KE+++ + ++
Sbjct: 120 GKDDKKVVEKVVIDDSGDEIEKEEGELEEGEIELDLESES-NEKVSEQVKEEMKLINVES 178
Query: 822 T----------DKSFPVVCSKLQSSLDSLGEL--DVSVPGNDHLIQLFMTALQTINSVFC 679
D SF VCSKL+ +L+SL EL + +VP D LIQL +A+Q+++SVFC
Sbjct: 179 IREALESVLRGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFC 238
Query: 678 SMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQD 499
SMN KE+N++ILSRLL KS P L SS Q+KE++A++ S+ A ++ E+D
Sbjct: 239 SMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRA--NDKEKDMLAM 296
Query: 498 NGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKAR 319
+G+ D N+ +ENA D N K S Q+ E+ KP ++R
Sbjct: 297 HGVNGKDSNI---VTENAVNDLNFKEKVPLPVDSLM------QNKPLEASKPGPPGYRSR 347
Query: 318 GVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFE-KGNSLLHS- 145
GV +PLLD HK HD D+LPSPTR+ P PV A G VK + + N+ +H
Sbjct: 348 GVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKT 407
Query: 144 --YETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
YETDAL+ SSYQQKF R+S F++ +LPSPTP
Sbjct: 408 PHYETDALRAFSSYQQKFGRNSFFMNSELPSPTP 441
>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|557541054|gb|ESR52098.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
Length = 1208
Score = 265 bits (677), Expect = 4e-68
Identities = 190/454 (41%), Positives = 261/454 (57%), Gaps = 42/454 (9%)
Frame = -1
Query: 1284 QDVEEGEISDSASVEEISEDAFK-RQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDVY 1108
+DVEEGEISD+ASVEEISE+ FK +Q+ KVV +A+RVWTMRD+Y
Sbjct: 3 KDVEEGEISDTASVEEISEEDFKIKQEEVVKVVKET---KPIKVGGGEAAARVWTMRDLY 59
Query: 1107 -KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQSE-------------- 979
KYP I R Y GL+NLAWAQAVQNKPL+E+FVM + D SK+S
Sbjct: 60 NKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSSPASSVASVNSGAAA 119
Query: 978 -------MEKVVIDVEDDDL-KPRXXXXXXXXEIDLDADVLDSKEANFIKEQLQSVTLDE 823
+EKVVID D++ K E+DL+++ + K + +KE+++ + ++
Sbjct: 120 GKDDKKVVEKVVIDDSGDEIEKEEGELEEGEIELDLESES-NEKVSEQVKEEMKLINVES 178
Query: 822 T----------DKSFPVVCSKLQSSLDSLGEL--DVSVPGNDHLIQLFMTALQTINSVFC 679
D SF VCSKL+ +L+SL EL + +VP D LIQL +A+Q+++SVFC
Sbjct: 179 IREALESVLRGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFC 238
Query: 678 SMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQD 499
SMN KE+N++ILSRLL KS P L SS Q+KE++A++ S+ A ++ E+D
Sbjct: 239 SMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRA--NDKEKDMLAM 296
Query: 498 NGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKAR 319
+G+ D N+ +ENA D N K S Q+ E+ KP ++R
Sbjct: 297 HGVNGKDSNI---VTENAVNDLNFKEKVPLPVDSLM------QNKPLEASKPGPPGYRSR 347
Query: 318 GVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFE-KGNSLLHS- 145
GV +PLLD HK HD D+LPSPTR+ P PV A G VK + + N+ +H
Sbjct: 348 GVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKT 407
Query: 144 --YETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
YETDAL+ SSYQQKF R+S F++ +LPSPTP
Sbjct: 408 PHYETDALRAFSSYQQKFGRNSFFMNSELPSPTP 441
>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|567892677|ref|XP_006438859.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
gi|557541053|gb|ESR52097.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
gi|557541055|gb|ESR52099.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
Length = 1118
Score = 265 bits (677), Expect = 4e-68
Identities = 190/454 (41%), Positives = 261/454 (57%), Gaps = 42/454 (9%)
Frame = -1
Query: 1284 QDVEEGEISDSASVEEISEDAFK-RQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDVY 1108
+DVEEGEISD+ASVEEISE+ FK +Q+ KVV +A+RVWTMRD+Y
Sbjct: 3 KDVEEGEISDTASVEEISEEDFKIKQEEVVKVVKET---KPIKVGGGEAAARVWTMRDLY 59
Query: 1107 -KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQSE-------------- 979
KYP I R Y GL+NLAWAQAVQNKPL+E+FVM + D SK+S
Sbjct: 60 NKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSSPASSVASVNSGAAA 119
Query: 978 -------MEKVVIDVEDDDL-KPRXXXXXXXXEIDLDADVLDSKEANFIKEQLQSVTLDE 823
+EKVVID D++ K E+DL+++ + K + +KE+++ + ++
Sbjct: 120 GKDDKKVVEKVVIDDSGDEIEKEEGELEEGEIELDLESES-NEKVSEQVKEEMKLINVES 178
Query: 822 T----------DKSFPVVCSKLQSSLDSLGEL--DVSVPGNDHLIQLFMTALQTINSVFC 679
D SF VCSKL+ +L+SL EL + +VP D LIQL +A+Q+++SVFC
Sbjct: 179 IREALESVLRGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFC 238
Query: 678 SMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQD 499
SMN KE+N++ILSRLL KS P L SS Q+KE++A++ S+ A ++ E+D
Sbjct: 239 SMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRA--NDKEKDMLAM 296
Query: 498 NGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKAR 319
+G+ D N+ +ENA D N K S Q+ E+ KP ++R
Sbjct: 297 HGVNGKDSNI---VTENAVNDLNFKEKVPLPVDSLM------QNKPLEASKPGPPGYRSR 347
Query: 318 GVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFE-KGNSLLHS- 145
GV +PLLD HK HD D+LPSPTR+ P PV A G VK + + N+ +H
Sbjct: 348 GVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKT 407
Query: 144 --YETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
YETDAL+ SSYQQKF R+S F++ +LPSPTP
Sbjct: 408 PHYETDALRAFSSYQQKFGRNSFFMNSELPSPTP 441
>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
notabilis]
Length = 1301
Score = 263 bits (671), Expect = 2e-67
Identities = 190/490 (38%), Positives = 259/490 (52%), Gaps = 71/490 (14%)
Frame = -1
Query: 1305 MEECNPVQDVEEGEISDSASVEEISEDAFKRQDP----PTKVVSSNLTXXXXXXXXXNSA 1138
+E V+DVEEGEISDSASVEEISE+ F +Q+ KV+S +
Sbjct: 4 IESGRVVEDVEEGEISDSASVEEISEEDFNKQEGNGTGSGKVMSVS---DSNSKESKFGD 60
Query: 1137 SRVWTMRDVY-KYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQ-------- 985
SRVWTMRD+Y YP R Y GLYNLAWAQAVQNKPL+E+FVM D +S +
Sbjct: 61 SRVWTMRDLYANYPGFRGYTTGLYNLAWAQAVQNKPLNEIFVMDVDADDSSRVVLSSASP 120
Query: 984 -------------SEMEKVVIDVEDDDLKPRXXXXXXXXEIDLDADV------------- 883
E+EKV V DD EIDL+++
Sbjct: 121 AVNSGRREGKNGVKEVEKVEKVVIDDSADEMEEGELEEGEIDLESEPTQKPAGEEAKDGD 180
Query: 882 ------------LDS------KEANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSL--- 766
+DS K + I E L SV + +KSF VCS+LQ +L+SL
Sbjct: 181 LNCEAENVGGLEVDSRRDELEKRVDLIWETLGSVNVVNAEKSFEEVCSRLQRTLESLRGV 240
Query: 765 -GELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLS 589
E + S P D +IQ+ +TA+Q +NSVFCSM+ + KE+ ++ LSRL K+ L S
Sbjct: 241 LSEKEFSFPTKDVVIQMSITAIQVVNSVFCSMSVNQKEQKKETLSRLFCSVKNCGTPLFS 300
Query: 588 SEQLKEVDAVILSVN-----QSAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSL 424
EQ KE++ +I S+N S+ +S+ E++ + +D N+++ ++ENA+++ S+
Sbjct: 301 PEQTKEIELMISSLNPLNVLPSSGASDKEKETQIIERLHEMDSNLTNANAENASIERTSV 360
Query: 423 NKYDSDAVSTKSSGLKEQSVSF-ESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRK 247
K D V +S + ++ E +P K RG+ +PLLDLHKDHD D+LPSPTR+
Sbjct: 361 -KLPQDCV---ASVVHSNPITLPELLRPGTLAFKGRGLLLPLLDLHKDHDADSLPSPTRE 416
Query: 246 IGPQFPVAIASTQAQGTVKRESPIFEKG----NSLLHSYETDALKIVSSYQQKFDRSSLF 79
FPV A G +K S + S LH YETDALK VS+YQQKF R S
Sbjct: 417 APSCFPVYKPLGVADGIIKPVSTTAKVAPGAEESRLHRYETDALKAVSTYQQKFGRGSFL 476
Query: 78 VSKKLPSPTP 49
+S +LPSPTP
Sbjct: 477 MSDRLPSPTP 486
>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 3-like [Cucumis sativus]
Length = 1249
Score = 258 bits (660), Expect = 4e-66
Identities = 191/483 (39%), Positives = 250/483 (51%), Gaps = 65/483 (13%)
Frame = -1
Query: 1302 EECNPVQDVEEGEISDSASVEEISEDAFKRQDP---PTKVVSSNLTXXXXXXXXXNSASR 1132
+E ++DVEEGEISD+ASVEEISE+ F + D P VV S N +R
Sbjct: 4 DEILKIEDVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSK---------DSNRETR 54
Query: 1131 VWTMRDVYK-YPISRD-YARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQS------- 982
VWTM D+YK YP R YA GLYNLAWAQAVQNKPL+++FVM D D SK S
Sbjct: 55 VWTMSDLYKNYPAMRHGYASGLYNLAWAQAVQNKPLNDIFVMEADLDEKSKHSSSTPFGN 114
Query: 981 ----------EMEKVVIDVEDDDLK------PRXXXXXXXXEIDLDA----DVLDSKE-- 868
E ++VVID D++ + EID+D +V DSK
Sbjct: 115 AKDDGSNTTKEEDRVVIDDSGDEMNCDNANGEKEEGELEEGEIDMDTEFVEEVADSKAML 174
Query: 867 -----------------------ANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGEL 757
FI++ L VT+D KSF VCS++ SS+++ EL
Sbjct: 175 SDSRDMDINGQEFDLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVEL 234
Query: 756 --DVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSE 583
VP D LIQ AL+ INSVFCSMN S KEE+++ LSRLL + K+ P L S E
Sbjct: 235 LQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPE 294
Query: 582 QLKEVDAVILSVNQ-----SAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNK 418
Q+K V+ + S + S S E + NG+K +D ++ S+ + NK
Sbjct: 295 QIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSS---QLTPSNK 351
Query: 417 YDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGP 238
SD++ G ++ E + +++ K RG +PLLDLHKDHD D+LPSPTR+
Sbjct: 352 LASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTRE--- 408
Query: 237 QFPVAIASTQAQGTVKRESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPS 58
I S Q G + F S H YETDALK VS+YQQKF RSS ++ +LPS
Sbjct: 409 --APTIFSVQKSGNAPTKM-AFPVDGSRSHPYETDALKAVSTYQQKFGRSSFSMADRLPS 465
Query: 57 PTP 49
PTP
Sbjct: 466 PTP 468
>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Cucumis sativus]
Length = 1249
Score = 258 bits (660), Expect = 4e-66
Identities = 191/483 (39%), Positives = 250/483 (51%), Gaps = 65/483 (13%)
Frame = -1
Query: 1302 EECNPVQDVEEGEISDSASVEEISEDAFKRQDP---PTKVVSSNLTXXXXXXXXXNSASR 1132
+E ++DVEEGEISD+ASVEEISE+ F + D P VV S N +R
Sbjct: 4 DEILKIEDVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSK---------DSNRETR 54
Query: 1131 VWTMRDVYK-YPISRD-YARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQS------- 982
VWTM D+YK YP R YA GLYNLAWAQAVQNKPL+++FVM D D SK S
Sbjct: 55 VWTMSDLYKNYPAMRHGYASGLYNLAWAQAVQNKPLNDIFVMEADLDEKSKHSSSTPFGN 114
Query: 981 ----------EMEKVVIDVEDDDLK------PRXXXXXXXXEIDLDA----DVLDSKE-- 868
E ++VVID D++ + EID+D +V DSK
Sbjct: 115 AKDDGSNTTKEEDRVVIDDSGDEMNCDNANGEKEEGELEEGEIDMDTEFVEEVADSKAML 174
Query: 867 -----------------------ANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGEL 757
FI++ L VT+D KSF VCS++ SS+++ EL
Sbjct: 175 SDSRDMDINGQEFDLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVEL 234
Query: 756 --DVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSE 583
VP D LIQ AL+ INSVFCSMN S KEE+++ LSRLL + K+ P L S E
Sbjct: 235 LQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPE 294
Query: 582 QLKEVDAVILSVNQ-----SAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNK 418
Q+K V+ + S + S S E + NG+K +D ++ S+ + NK
Sbjct: 295 QIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSS---QLTPSNK 351
Query: 417 YDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGP 238
SD++ G ++ E + +++ K RG +PLLDLHKDHD D+LPSPTR+
Sbjct: 352 LASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTRE--- 408
Query: 237 QFPVAIASTQAQGTVKRESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPS 58
I S Q G + F S H YETDALK VS+YQQKF RSS ++ +LPS
Sbjct: 409 --APTIFSVQKSGNAPTKM-AFPVDGSRSHPYETDALKAVSTYQQKFGRSSFSMADRLPS 465
Query: 57 PTP 49
PTP
Sbjct: 466 PTP 468
>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Vitis vinifera]
Length = 1238
Score = 258 bits (660), Expect = 4e-66
Identities = 181/468 (38%), Positives = 254/468 (54%), Gaps = 55/468 (11%)
Frame = -1
Query: 1287 VQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDV- 1111
++DVEEGEISDSASVEEISE+ F +Q+ +V+ + +RVWTMRD+
Sbjct: 12 IEDVEEGEISDSASVEEISEEDFNKQE--VRVLRE---------AKPKADTRVWTMRDLQ 60
Query: 1110 --YKY-PISRDYARGLYNLAWAQAVQNKPLDELFVM-------------TTDDSNSKQSE 979
YKY Y LYNLAWAQAVQNKPL+++FVM T+ D +S E
Sbjct: 61 DLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTSRDDSSSAKE 120
Query: 978 MEKVVID-------VEDDDLKPRXXXXXXXXEIDLDAD--------VLDSKEANF----- 859
+ KV+ID V+ DD+ + EIDLD++ VLD E
Sbjct: 121 VAKVIIDDSGDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKER 180
Query: 858 --------IKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGEL-------DVSVPGNDHLI 724
I+E L+SVT+ E +KSF VCS+LQ++L SL ++ + SVP D L
Sbjct: 181 ELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALA 240
Query: 723 QLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVN 544
Q + A++ +N VFCSMN + KE N+D+ SRLL + + S + +KEV+ ++ ++
Sbjct: 241 QQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLD 300
Query: 543 QSAVSSNIEEDNDQDNGIKVLD---MNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKE 373
A S+ E +D+ N ++V D N+ S E++ F S K D++S +S
Sbjct: 301 TPAAQSSAEA-SDKVNDVQVTDGMNRNILDSSVESSGRAFASAKKLSLDSISVESYNQNN 359
Query: 372 QSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTV 193
++ KP L++S+ R + PLLDLHKDHDED+LPSPT K FPV + +
Sbjct: 360 P----DALKPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPV------NKSEL 409
Query: 192 KRESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
E +S++H YETDALK VS+YQQKF +S KLPSPTP
Sbjct: 410 VTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTP 457
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 247 bits (631), Expect = 1e-62
Identities = 177/461 (38%), Positives = 238/461 (51%), Gaps = 34/461 (7%)
Frame = -1
Query: 1329 KKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXX 1150
K +T S ++DVEEGEISD+ASVEEISED F +Q+ VV T
Sbjct: 3 KNETASAAANGSGKMEDVEEGEISDTASVEEISEDDFNKQE----VVVVKETPSSTTNNN 58
Query: 1149 XNSASRVWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFV-MTTDDS-------- 997
+S +VWT+RD+YKY + Y GLYNLAWAQAVQNKPL+ELFV + DDS
Sbjct: 59 SSSKQKVWTVRDLYKYQVGGGYMSGLYNLAWAQAVQNKPLNELFVEVEVDDSSQKSSVSS 118
Query: 996 -NSKQSEMEKVVIDVEDDDLK-------PRXXXXXXXXEIDLDAD---------VLDSKE 868
NS + + VVID D++ + EIDLD++ V K
Sbjct: 119 VNSSKEDKRTVVIDDSGDEMDVVKVIDIEKEEGELEEGEIDLDSEGKSEGGMVSVDTEKR 178
Query: 867 ANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGEL----DVSVPGNDHLIQLFMTALQ 700
I+E L+SV++ + DKSF VC KL ++L+SL EL + P D L++L TA+
Sbjct: 179 VKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLLFTAIG 238
Query: 699 TINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNI 520
+NS F SMNQ KE+N+ + R L S P+ S E KEV
Sbjct: 239 AVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEVC--------------- 283
Query: 519 EEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPV 340
D N D + + D ++N+ S A S + + + S E KP
Sbjct: 284 ----DFCN----FDFRIV-----SLCYDLTTMNRLPSAAESFVHN---KPNFSIEPPKPG 327
Query: 339 LANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFEKGN 160
+ + K+RGV +PLLDL K HDED+LPSPTR+ P FPV G + P+ + +
Sbjct: 328 VPSFKSRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVAS 387
Query: 159 ----SLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
+H YETDALK VSSYQ+KF+ +S F + +LPSPTP
Sbjct: 388 ITEEPRVHPYETDALKAVSSYQKKFNLNSFF-TNELPSPTP 427
>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
3 [Populus trichocarpa]
Length = 1190
Score = 239 bits (610), Expect = 3e-60
Identities = 170/436 (38%), Positives = 238/436 (54%), Gaps = 23/436 (5%)
Frame = -1
Query: 1287 VQDVEEGEISDSASVEEISEDAFKRQDPPT--KVVSSNLTXXXXXXXXXNSASRVWTMRD 1114
++DVEEGEISD+ASVEEISE+ F +Q+ + SSN NS+ +VWT+RD
Sbjct: 15 IEDVEEGEISDTASVEEISEEDFNKQEVVIVKETPSSN-----------NSSQKVWTVRD 63
Query: 1113 VYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQSEMEKVVIDVEDDDLKP 934
+YKY + Y GLYNLAWA+AVQNKPL+EL V+ DDS + ++ + I+ E+ +L+
Sbjct: 64 LYKYQVGGGYMSGLYNLAWARAVQNKPLNELTVV-IDDSGDEMDVVKVIDIEKEEGELE- 121
Query: 933 RXXXXXXXXEIDLDAD--VLDSK---------EANFIKEQLQSVTLDETDKSFPVVCSKL 787
EIDLD++ V+ S+ I++ L+SV++ ET+KSF VC KL
Sbjct: 122 -------EGEIDLDSEPVVVQSEGMVSVDVENRVKSIRKDLESVSVIETEKSFEAVCLKL 174
Query: 786 QSSLDSLGEL----DVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIH 619
L+SL EL D S P D L+QL A++ +NSVFCSMN+ KE+N+ + SR
Sbjct: 175 HKVLESLKELVGGNDNSFPSKDGLVQLLFMAIRVVNSVFCSMNKKLKEQNKGVFSRFFSL 234
Query: 618 AKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANL 439
S P S Q KE VL+ N + ++ A
Sbjct: 235 LNSHYPPFFSPGQNKE----------------------------VLNENHNDSLAKTAGY 266
Query: 438 DFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPS 259
D ++++ A T +S+ P + + K+RGV +PLLDL K HDED+LPS
Sbjct: 267 DLTTMSE-KLPAAETFVQNKPNKSIEAPK-PPGVPSFKSRGVLLPLLDLKKYHDEDSLPS 324
Query: 258 PTRKIGPQFPVAIASTQAQGTVK------RESPIFEKGNSLLHSYETDALKIVSSYQQKF 97
PT++ P FPV G V + +P+ E+ +H YETDALK VSSYQQKF
Sbjct: 325 PTQETTP-FPVQRLLAIGDGMVSSGLPVPKVTPVAEEPR--MHPYETDALKAVSSYQQKF 381
Query: 96 DRSSLFVSKKLPSPTP 49
+R+S F + +LPSPTP
Sbjct: 382 NRNSFF-TNELPSPTP 396
>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
Length = 1184
Score = 234 bits (597), Expect = 8e-59
Identities = 163/439 (37%), Positives = 231/439 (52%), Gaps = 26/439 (5%)
Frame = -1
Query: 1287 VQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDV- 1111
++DVEEGEISDSASVEEISE+ F +Q+ +V+ + +RVWTMRD+
Sbjct: 52 IEDVEEGEISDSASVEEISEEDFNKQE--VRVLRE---------AKPKADTRVWTMRDLQ 100
Query: 1110 --YKY-PISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQ------SEMEKVVID 958
YKY Y LYNLAWAQAVQNKPL+++FV+ D + SE E+ ++
Sbjct: 101 DLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVIIDDSGDEMDVKMDDVSEKEEGELE 160
Query: 957 VEDDDLKPRXXXXXXXXEIDLDADVLDSKEANF------IKEQLQSVTLDETDKSFPVVC 796
+ DL +D++ +D KE I+E L+SVT+ E +KSF VC
Sbjct: 161 EGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVC 220
Query: 795 SKLQSSLDSLGEL-------DVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDIL 637
S+LQ++L SL ++ + SVP D L Q + A++ +N VFCSMN + KE N+D+
Sbjct: 221 SRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVF 280
Query: 636 SRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKVLD---MNVS 466
SRLL + + S + +KEV+ ++ ++ A S+ E +D+ N ++V D N+
Sbjct: 281 SRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEA-SDKVNDVQVTDGMNRNIL 339
Query: 465 HKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHK 286
S E++ F S K+ + R + PLLDLHK
Sbjct: 340 DSSVESSGRAFASAKKF-----------------------------RGRFIFGPLLDLHK 370
Query: 285 DHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFEKGNSLLHSYETDALKIVSSYQ 106
DHDED+LPSPT K FPV + + E +S++H YETDALK VS+YQ
Sbjct: 371 DHDEDSLPSPTGKAPQCFPV------NKSELVTAKVAHETQDSIMHPYETDALKAVSTYQ 424
Query: 105 QKFDRSSLFVSKKLPSPTP 49
QKF +S KLPSPTP
Sbjct: 425 QKFGLTSFLPIDKLPSPTP 443
>ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Glycine max]
Length = 1261
Score = 233 bits (594), Expect = 2e-58
Identities = 179/481 (37%), Positives = 247/481 (51%), Gaps = 56/481 (11%)
Frame = -1
Query: 1323 KTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXN 1144
+ L ++ + +DVEEGEISD+ASVEEIS + F +QD K++++N
Sbjct: 10 EVLGKLEKMGKEAEDVEEGEISDTASVEEISAEDFNKQD--VKLLNNN-------NKPNG 60
Query: 1143 SASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD---DSNSKQSE 979
S +RVW + D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM D ++NS ++
Sbjct: 61 SDARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNRNS 120
Query: 978 MEK-----------VVIDVE-----------DDDLKPRXXXXXXXXEI-------DLDAD 886
+ VV+DV+ D D +P + D+ D
Sbjct: 121 SHRLASVAVNPKDVVVVDVDKEEGELEEGEIDADAEPEGEAESVVVAVSDSEKLDDVKMD 180
Query: 885 VLDSKEANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGELDVSVPGN---DHLIQLF 715
V DS++ + L+ VT+ +SF CSKLQ++L + +S P D L++L
Sbjct: 181 VSDSEQLG-ARGVLEGVTVANVVESFAQTCSKLQNTLPEV----LSRPAGSEKDDLVRLS 235
Query: 714 MTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPA-LLSSEQLKEV-------DAV 559
A + + SVFCSM+ S KE+N+D + RLL K Q A L S E +KE+ D+V
Sbjct: 236 FNATEVVYSVFCSMDSSEKEQNKDSILRLLSFVKDQQQAQLFSPEHVKEIQGMMTAIDSV 295
Query: 558 ILSVNQSAVSSNIE----EDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKYDSDA---V 400
VN A+ E E Q+N + ++ K+ EN ++ L Y +
Sbjct: 296 GALVNSEAIGKEKELQTTEIKTQENSAVEVQIH-EIKTQENQAVEAAELISYSKPLHRDI 354
Query: 399 STKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAI 220
+ S LK S K RGV +PLLDLHKDHD D+LPSPTR+ FPV
Sbjct: 355 TGTSQALKFGQNSI----------KGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVNK 404
Query: 219 ASTQAQGTVKRESPI----FEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPT 52
+ + V+ S + S H YETDALK VS+YQQKF RSSLF + K PSPT
Sbjct: 405 LLSVGESMVRSGSASAKMELDSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKFPSPT 464
Query: 51 P 49
P
Sbjct: 465 P 465
>ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Glycine max]
Length = 1257
Score = 233 bits (593), Expect = 2e-58
Identities = 184/494 (37%), Positives = 253/494 (51%), Gaps = 58/494 (11%)
Frame = -1
Query: 1356 IYLFILRKEKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNL 1177
I+ +L EK L +M +E V+DVEEGEISD+ASVEEIS + F +QD KV+++N
Sbjct: 2 IFGSLLDCEKLGKLEKMGKE---VEDVEEGEISDTASVEEISAEDFNKQD--VKVLNNN- 55
Query: 1176 TXXXXXXXXXNSASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD 1003
S +RVW + D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM D
Sbjct: 56 ------NKPNGSDARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVD 109
Query: 1002 -----DSNSKQSEM---------EKVVIDVEDDDLKPRXXXXXXXXEIDLDAD------- 886
+SNS S + VV+DV+ ++ EID DA+
Sbjct: 110 SDANANSNSNNSNRLASVAVNPKDVVVVDVDKEE------GELEEGEIDADAEPEGEAES 163
Query: 885 ------VLDSKEANFIKEQ------------LQSVTLDETDKSFPVVCSKLQSSLDSLGE 760
V DS++ + +K L+ VT+ +SF CSKLQ++L +
Sbjct: 164 VVAVPVVSDSEKLDDVKRDVSNSEQLGVRGVLEGVTVANVAESFAQTCSKLQNALPEV-- 221
Query: 759 LDVSVPGN---DHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPA-LL 592
+S P + D L++L A + + SVFCSM+ KE+N+D + RLL K Q A L
Sbjct: 222 --LSRPADSERDDLVRLSFNATEVVYSVFCSMDSLKKEQNKDSILRLLSFVKDQQQAQLF 279
Query: 591 SSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKYD 412
S E +KE+ ++ +++ N E ++ ++ K+ EN ++ L Y+
Sbjct: 280 SPEHIKEIQGMMTAIDYFGALVNSEAIG-KEKELQTTVQTHEIKTQENQAVEAAELISYN 338
Query: 411 ----SDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKI 244
SD + S LK S K RGV +PLLDLHKDHD D+LPSPTR+
Sbjct: 339 KPLHSDIIGA-SHALKFGQNSI----------KGRGVLLPLLDLHKDHDADSLPSPTREA 387
Query: 243 GPQFPV---------AIASTQAQGTVKRESPIFEKGNSLLHSYETDALKIVSSYQQKFDR 91
FPV ++S A + + S H YETDALK VS+YQQKF R
Sbjct: 388 PSCFPVNKLLSVGEPMVSSGSAAAKPESGKMELDSEGSKFHLYETDALKAVSTYQQKFGR 447
Query: 90 SSLFVSKKLPSPTP 49
SSLF + K PSPTP
Sbjct: 448 SSLFTNDKFPSPTP 461
>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Fragaria vesca subsp. vesca]
Length = 1230
Score = 231 bits (588), Expect = 9e-58
Identities = 167/451 (37%), Positives = 235/451 (52%), Gaps = 33/451 (7%)
Frame = -1
Query: 1302 EECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNSASRVWT 1123
E V DVEEGEI DS SVEEISE+ F +Q+ SN +R WT
Sbjct: 5 ESSREVVDVEEGEIPDSNSVEEISEEDFVKQESKAVEPKSN--------GGSGDGARFWT 56
Query: 1122 MRDVYKYPISRDYARG-LYNLAWAQAVQNKPLDELFVMTTDDSNSKQSEMEK-------- 970
+V +P R G L NLAWAQAVQNKP ++L V D SKQ + ++
Sbjct: 57 FHEVLAHPHFRGIGGGGLANLAWAQAVQNKPFNDLLVKLDSDEKSKQQQQQRSSVSSGNE 116
Query: 969 --VVIDVEDDDLKPRXXXXXXXXEIDLDADVLDS-------------KEANFIKEQLQSV 835
V+ID D+ + EI D++ D+ K N ++E L+S+
Sbjct: 117 KVVIIDSGDEMDVEKEEEELEEGEIGFDSECGDNDKAAGSVGNGVWEKRVNLLREALESL 176
Query: 834 TLDETDKSFPVVCSKLQSSLDSLGEL--DVSVPGNDHLIQLFMTALQTINSVFCSMNQSN 661
T+ E +KSF VC + SL+SL + +++V + L+Q A++ I+SVF SM+
Sbjct: 177 TITEAEKSFGDVCHRFLDSLESLRGVLSEINVSTKEALVQQLFNAVRAISSVFRSMSADQ 236
Query: 660 KEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQD-NGIKV 484
KE+N+D+LSR+L AKS P+ +EQLKE++ + S++ + +E+ Q NG+
Sbjct: 237 KEQNKDVLSRILSSAKSD-PSPFPAEQLKEIEVMSSSMDSPQTKAGTKENGIQCINGVYK 295
Query: 483 LDMNVSHKSSENANLDFNSLNKYDSDA-VSTKSSGLKEQSVSFESFKPVLANSKARGVSI 307
D S S NA+ F SD VS S ++S E + ++ K RG+ +
Sbjct: 296 TD---SDTSGANASHVFTYAANTGSDTQVSVVHSN---PNISSEVPRSGSSSFKGRGLML 349
Query: 306 PLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRES-----PIFEKGNSLLHSY 142
PLLDLH DHDED+LPSPTR+ FP G VK+ + S +H Y
Sbjct: 350 PLLDLHMDHDEDSLPSPTREPPACFPAQKPVVVENGMVKKSGWETARAALDVEGSKMHVY 409
Query: 141 ETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
ET+ALK VSSYQQKF R+S F++ +LPSPTP
Sbjct: 410 ETEALKAVSSYQQKFSRNS-FLTSELPSPTP 439
>ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X2 [Cicer arietinum]
Length = 1227
Score = 228 bits (581), Expect = 6e-57
Identities = 169/455 (37%), Positives = 233/455 (51%), Gaps = 27/455 (5%)
Frame = -1
Query: 1332 EKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXX 1153
E K M +E V+DVEEGEISD+ASV EISE+ F +QD VV N
Sbjct: 10 ENSKNFEGMGKE---VEDVEEGEISDTASVVEISEEDFNKQD----VVKVNNNSDSDKAK 62
Query: 1152 XXNSASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-DSNS--- 991
A RVW + D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM D DSN+
Sbjct: 63 TGGDA-RVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDSNANVV 121
Query: 990 -------KQSEMEKVVIDVEDDDLKPRXXXXXXXXEIDLDADVLDSKEANFIKEQLQSVT 832
++ E+E+ ID +DD + + D ++ + I++ L+ VT
Sbjct: 122 MVDDDEREEGELEEGEIDGDDDT-----------GGVMVGGDGSETVSESDIRDFLEGVT 170
Query: 831 LDETDKSFPVVCSKLQSSLDSLGELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEE 652
+ +SF S+L L S +V D++I+L A++ ++SVFCSM+ KE+
Sbjct: 171 VANVAESFAETISRLLRVLQSKLLSGPAVSEKDYVIRLLYNAIEIVHSVFCSMDNLQKED 230
Query: 651 NRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQ-SAVSSNIEEDNDQDNGIKVLDM 475
N+D + RLL K++ L S E +KE+ +I +++ A+ +++ N + + LD+
Sbjct: 231 NKDNIIRLLYFLKNEHTQLFSPEHMKEIQVMITAIDTVDALGNSVVVGNGEK--LDTLDI 288
Query: 474 NVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLD 295
A+ +S S+ + L QS N K RGV +PL D
Sbjct: 289 KTRQIQGLKASELISSSKLVHSNLTEASEALLSGQS-----------NIKGRGVMLPLFD 337
Query: 294 LHKDHDEDTLPSPTRKIGPQFPV-------------AIASTQAQGTVKRESPIFEKGNSL 154
LHK HD D+LPSPTR+ FPV + S VK E + NS
Sbjct: 338 LHKVHDLDSLPSPTREAPSFFPVNKLFSVGDGMDRPGLPSAGKTEAVKME---LDTENSK 394
Query: 153 LHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
H YETDALK VS+YQQKF RSS F K PSPTP
Sbjct: 395 NHLYETDALKAVSTYQQKFGRSSYFTDDKFPSPTP 429
>ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula] gi|355496659|gb|AES77862.1| RNA
polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
Length = 1213
Score = 226 bits (576), Expect = 2e-56
Identities = 169/473 (35%), Positives = 238/473 (50%), Gaps = 41/473 (8%)
Frame = -1
Query: 1344 ILRKEKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDP------PTKVVSS 1183
+L E K L EM +E V+DVEEGEISDSAS+EEI+E+ FK+ D K S
Sbjct: 6 LLDFEISKNLIEMGKE---VEDVEEGEISDSASLEEITEEDFKKGDDVKVNNSDVKTDKS 62
Query: 1182 NLTXXXXXXXXXNSASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMT 1009
+ SRVW ++D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM
Sbjct: 63 DNKVKTGGGGGGGGDSRVWAVQDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVME 122
Query: 1008 TD--------DSNSKQSEMEKV---VIDVEDDDLKPRXXXXXXXXEIDLDADVLDSKEAN 862
D +S +K E+ K ++ V+DDD K + D D D + N
Sbjct: 123 LDKNANANSNNSGNKDGELNKSSKEIVVVDDDDEKEEGELEEGEIDGDADDDCVIVGSEN 182
Query: 861 F-------IKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGELDVSVPGNDHLIQLFMTAL 703
F ++ L+ VT+ +SF C ++Q +L S D L++L A+
Sbjct: 183 FSNSEVLGVRGVLEGVTVASVAESFAETCRRIQGTLQSKVFSGFDSAEKDDLVRLLFNAV 242
Query: 702 QTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVD---AVILSVNQSAV 532
+ + SVFC M+ KEEN+D +SRLL K+Q L + E +K+V V+++V S
Sbjct: 243 EVVYSVFCCMDNLQKEENKDNISRLLSFLKNQ--HLFTMEHMKKVIFNIQVMITVIDSVF 300
Query: 531 SSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSV-SFE 355
+ E ++ ++ L+ + +D + S + + S + E
Sbjct: 301 ALGNNEVVGKEEKVEALNTT-------------EQIPGLKADEYISSSQLVHDNSTYASE 347
Query: 354 SFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKR---- 187
+ + +N RG+ +PL DLHKDHD D+LPSPTR+ FPV + + R
Sbjct: 348 ALQYGQSNVVGRGLMLPLFDLHKDHDLDSLPSPTREAPSCFPVNKLFSDLGDGIDRFGLP 407
Query: 186 -------ESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
E + +S LH YETDALK VS+YQQKF RSS F K PSPTP
Sbjct: 408 PAVCTEAEKMELDGKDSKLHIYETDALKAVSTYQQKFSRSSYFTDDKFPSPTP 460
>ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X1 [Cicer arietinum]
Length = 1247
Score = 226 bits (575), Expect = 3e-56
Identities = 173/467 (37%), Positives = 235/467 (50%), Gaps = 39/467 (8%)
Frame = -1
Query: 1332 EKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXX 1153
E K M +E V+DVEEGEISD+ASV EISE+ F +QD VV N
Sbjct: 10 ENSKNFEGMGKE---VEDVEEGEISDTASVVEISEEDFNKQD----VVKVNNNSDSDKAK 62
Query: 1152 XXNSASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-------- 1003
A RVW + D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM D
Sbjct: 63 TGGDA-RVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDSNANAN 121
Query: 1002 ---DSNSKQSEME---KVVIDVEDDDLKPRXXXXXXXXEIDLDADV---------LDSKE 868
DSN+ ++ K V+ V+DD+ R EID D D ++
Sbjct: 122 SNNDSNNGNGDLNMPLKEVVMVDDDE---REEGELEEGEIDGDDDTGGVMVGGDGSETVS 178
Query: 867 ANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGELDVSVPGNDHLIQLFMTALQTINS 688
+ I++ L+ VT+ +SF S+L L S +V D++I+L A++ ++S
Sbjct: 179 ESDIRDFLEGVTVANVAESFAETISRLLRVLQSKLLSGPAVSEKDYVIRLLYNAIEIVHS 238
Query: 687 VFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQ-SAVSSNIEED 511
VFCSM+ KE+N+D + RLL K++ L S E +KE+ +I +++ A+ +++
Sbjct: 239 VFCSMDNLQKEDNKDNIIRLLYFLKNEHTQLFSPEHMKEIQVMITAIDTVDALGNSVVVG 298
Query: 510 NDQDNGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLAN 331
N + + LD+ A+ +S S+ + L QS N
Sbjct: 299 NGEK--LDTLDIKTRQIQGLKASELISSSKLVHSNLTEASEALLSGQS-----------N 345
Query: 330 SKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPV-------------AIASTQAQGTVK 190
K RGV +PL DLHK HD D+LPSPTR+ FPV + S VK
Sbjct: 346 IKGRGVMLPLFDLHKVHDLDSLPSPTREAPSFFPVNKLFSVGDGMDRPGLPSAGKTEAVK 405
Query: 189 RESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
E + NS H YETDALK VS+YQQKF RSS F K PSPTP
Sbjct: 406 ME---LDTENSKNHLYETDALKAVSTYQQKFGRSSYFTDDKFPSPTP 449