BLASTX nr result

ID: Atropa21_contig00006913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00006913
         (1680 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...   549   e-153
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...   530   e-147
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   530   e-147
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l...   274   1e-70
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...   265   4e-68
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...   265   4e-68
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...   265   4e-68
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l...   263   2e-67
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   258   4e-66
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...   258   4e-66
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   258   4e-66
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   247   1e-62
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric...   239   3e-60
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              234   8e-59
ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal doma...   233   2e-58
ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal doma...   233   2e-58
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma...   231   9e-58
ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal doma...   228   6e-57
ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphat...   226   2e-56
ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal doma...   226   3e-56

>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum tuberosum]
          Length = 1218

 Score =  549 bits (1414), Expect = e-153
 Identities = 307/432 (71%), Positives = 341/432 (78%), Gaps = 13/432 (3%)
 Frame = -1

Query: 1305 MEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNSASRVW 1126
            MEECN V+DVEEGEISDSASVEEISEDAF RQDPPT      +           + +RVW
Sbjct: 1    MEECNRVEDVEEGEISDSASVEEISEDAFNRQDPPT-TTKIKIASNENQNQNSTTTTRVW 59

Query: 1125 TMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSN----SKQSEMEKVVID 958
            TMRD YKYPISRDYARGLYNLAWAQAVQNKPLDELFVMT+D+SN    +  +   KV+ID
Sbjct: 60   TMRDAYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCANANANVESKVIID 119

Query: 957  VE-DDDLKPRXXXXXXXXEIDLDADVLD-SKEANFIKEQLQSVTLDETDKSFPVVCSKLQ 784
            V+ DDD K          ++D    VL+  KEANF++EQLQSVTLDET KSF +VCSKLQ
Sbjct: 120  VDVDDDAKEEGELEEGEIDLDAADLVLNFGKEANFVREQLQSVTLDETHKSFSMVCSKLQ 179

Query: 783  SSLDSLGELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQI 604
            +SL +LGEL +S   ND LIQLFMTAL+TINSVF SMNQ  K++N DILSRLL HAK+Q+
Sbjct: 180  TSLLALGELALSQDKNDILIQLFMTALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQL 239

Query: 603  PALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKV---LDMNVSHKSSENANLDF 433
            PALLSSEQLKEVDAVILS+NQSAV SN  +DND+ NGIKV   LD  VSHKSSENAN DF
Sbjct: 240  PALLSSEQLKEVDAVILSINQSAVFSN-TQDNDKVNGIKVVELLDKKVSHKSSENANQDF 298

Query: 432  NSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPT 253
             ++NKYD  AVS KSSGLKEQSVSFES KP LANSKA+G+SIPLLDLHKDHDEDTLPSPT
Sbjct: 299  TAVNKYDLGAVSIKSSGLKEQSVSFESVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPT 358

Query: 252  RKIGPQFPVAIASTQAQGTVKRESPIF----EKGNSLLHSYETDALKIVSSYQQKFDRSS 85
            R+IGPQFPVA A TQA G VK + PIF    EKGNSLLH YETDALK VSSYQQKF RSS
Sbjct: 359  REIGPQFPVAKA-TQAHGMVKLDLPIFAGSLEKGNSLLHPYETDALKAVSSYQQKFGRSS 417

Query: 84   LFVSKKLPSPTP 49
            LFVS+ LPSPTP
Sbjct: 418  LFVSENLPSPTP 429


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum lycopersicum]
          Length = 1211

 Score =  530 bits (1364), Expect = e-147
 Identities = 298/430 (69%), Positives = 332/430 (77%), Gaps = 11/430 (2%)
 Frame = -1

Query: 1305 MEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNS--ASR 1132
            MEECN V+D EEGEISDSASVEEISEDAF RQDPPT   +S +          NS  A+R
Sbjct: 1    MEECNRVEDAEEGEISDSASVEEISEDAFNRQDPPTTSTTSKIKIASNENQNQNSTTATR 60

Query: 1131 VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQSEMEKVVIDVE 952
            VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMT+D+SN   +   KV+IDV+
Sbjct: 61   VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCANGESKVIIDVD 120

Query: 951  -DDDLKPRXXXXXXXXEID-LDADVLDSKEANFIKEQLQSVTLDETDKSFPVVCSKLQSS 778
             DDD K          ++D  D  V   KEANFI+EQLQSVTLDET KSF +VCSKLQ+S
Sbjct: 121  VDDDAKEEGELEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTS 180

Query: 777  LDSLGELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPA 598
            L +LGEL +S   ND LIQLFMTAL+TINSVF SMN   K++N DILSRLL +AK+Q+PA
Sbjct: 181  LLALGELALSQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPA 240

Query: 597  LLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKV---LDMNVSHKSSENANLDFNS 427
            LLSSEQLKE+DA+ILS+N S VSSN  +DND  NGI V   LDM  SHKSSENAN DF S
Sbjct: 241  LLSSEQLKELDALILSINHSLVSSN-TQDNDTVNGINVVQLLDMKDSHKSSENANQDFTS 299

Query: 426  LNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRK 247
            +NKYD   VS KSSGLKEQSVS ES KP L NSKA+G+S PLLDLHKDHDEDTLPSPTR+
Sbjct: 300  VNKYDLGDVSIKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQ 359

Query: 246  IGPQFPVAIASTQAQGTVKRESPIF----EKGNSLLHSYETDALKIVSSYQQKFDRSSLF 79
            IGPQFP    +TQ  G VK + PIF    +KGNSLLH YETDALK VSSYQQKF RSSLF
Sbjct: 360  IGPQFP----ATQTHGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLF 415

Query: 78   VSKKLPSPTP 49
            VS+ LPSPTP
Sbjct: 416  VSENLPSPTP 425


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  530 bits (1364), Expect = e-147
 Identities = 298/430 (69%), Positives = 332/430 (77%), Gaps = 11/430 (2%)
 Frame = -1

Query: 1305 MEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNS--ASR 1132
            MEECN V+D EEGEISDSASVEEISEDAF RQDPPT   +S +          NS  A+R
Sbjct: 1    MEECNRVEDAEEGEISDSASVEEISEDAFNRQDPPTTSTTSKIKIASNENQNQNSTTATR 60

Query: 1131 VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQSEMEKVVIDVE 952
            VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMT+D+SN   +   KV+IDV+
Sbjct: 61   VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCANGESKVIIDVD 120

Query: 951  -DDDLKPRXXXXXXXXEID-LDADVLDSKEANFIKEQLQSVTLDETDKSFPVVCSKLQSS 778
             DDD K          ++D  D  V   KEANFI+EQLQSVTLDET KSF +VCSKLQ+S
Sbjct: 121  VDDDAKEEGELEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTS 180

Query: 777  LDSLGELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPA 598
            L +LGEL +S   ND LIQLFMTAL+TINSVF SMN   K++N DILSRLL +AK+Q+PA
Sbjct: 181  LLALGELALSQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPA 240

Query: 597  LLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKV---LDMNVSHKSSENANLDFNS 427
            LLSSEQLKE+DA+ILS+N S VSSN  +DND  NGI V   LDM  SHKSSENAN DF S
Sbjct: 241  LLSSEQLKELDALILSINHSLVSSN-TQDNDTVNGINVVQLLDMKDSHKSSENANQDFTS 299

Query: 426  LNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRK 247
            +NKYD   VS KSSGLKEQSVS ES KP L NSKA+G+S PLLDLHKDHDEDTLPSPTR+
Sbjct: 300  VNKYDLGDVSIKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQ 359

Query: 246  IGPQFPVAIASTQAQGTVKRESPIF----EKGNSLLHSYETDALKIVSSYQQKFDRSSLF 79
            IGPQFP    +TQ  G VK + PIF    +KGNSLLH YETDALK VSSYQQKF RSSLF
Sbjct: 360  IGPQFP----ATQTHGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLF 415

Query: 78   VSKKLPSPTP 49
            VS+ LPSPTP
Sbjct: 416  VSENLPSPTP 425


>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao]
          Length = 1290

 Score =  274 bits (700), Expect = 1e-70
 Identities = 198/490 (40%), Positives = 268/490 (54%), Gaps = 61/490 (12%)
 Frame = -1

Query: 1335 KEKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXX 1156
            K+ ++TL EM ++   V+DVEEGEISDSAS+EEISE+ F +QD   K++  + +      
Sbjct: 15   KKNEETLGEMGKDETKVEDVEEGEISDSASIEEISEEDFNKQD--VKILKESKS---SKG 69

Query: 1155 XXXNSASRVWTMRDVYKYP-ISRDYARGLYNLAWAQAVQNKPLDELFV------MTTDDS 997
               NS SRVWTM+D+ KYP + R YA GLYN AWAQAVQNKPL+E+FV         ++ 
Sbjct: 70   GEANSNSRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNEIFVKDFEQPQQDENK 129

Query: 996  NSKQSEME--------------------KVVIDVEDDDLK--------PRXXXXXXXXEI 901
            NSK+S                       KVVID + +D           +        EI
Sbjct: 130  NSKRSSPSSSVASVNSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNLDKEEGELEEGEI 189

Query: 900  DLDAD----VLDS------------KEANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDS 769
            DLD++    VL S            K AN I+  L+ VT+ E +KSF  VCS+L ++L+S
Sbjct: 190  DLDSEPKEKVLSSEDGNVGNSDELEKRANLIRGVLEGVTVIEAEKSFEGVCSRLHNALES 249

Query: 768  LGE--LDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPAL 595
            L    L+ SVP  D LIQL   A   INS F ++N ++KE+N  ILSRLL   K   P+L
Sbjct: 250  LRALILECSVPAKDALIQL---AFGAINSAFVALNCNSKEQNVAILSRLLSIVKGHDPSL 306

Query: 594  LSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKY 415
               +++KE+D +++S+N  A + + E+D    +G+   D +      EN   D    NK 
Sbjct: 307  FPPDKMKEIDVMLISLNSPARAIDTEKDMKVVDGVNKKDPDA---LPENICHDLTVTNKL 363

Query: 414  DSDA---VSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKI 244
             S A   ++ K + L       E+ KP + N + RG+S+PLLDLHKDHD D+LPSPTR+ 
Sbjct: 364  PSSAKFVINNKPNALT------ETLKPGVPNFRNRGISLPLLDLHKDHDADSLPSPTRET 417

Query: 243  GPQFPVAIASTQAQGTVKRESPIFEKGN-----SLLHSYETDALKIVSSYQQKFDRSSLF 79
             P  PV    T     VK    +  KG+       LH YETDALK  S+YQQKF + S F
Sbjct: 418  TPCLPVNKPLTSGDVMVK-SGFMTGKGSHDAEGDKLHPYETDALKAFSTYQQKFGQGSFF 476

Query: 78   VSKKLPSPTP 49
             S +LPSPTP
Sbjct: 477  SSDRLPSPTP 486


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 3-like
            [Citrus sinensis] gi|557541056|gb|ESR52100.1|
            hypothetical protein CICLE_v10030535mg [Citrus
            clementina]
          Length = 1234

 Score =  265 bits (677), Expect = 4e-68
 Identities = 190/454 (41%), Positives = 261/454 (57%), Gaps = 42/454 (9%)
 Frame = -1

Query: 1284 QDVEEGEISDSASVEEISEDAFK-RQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDVY 1108
            +DVEEGEISD+ASVEEISE+ FK +Q+   KVV               +A+RVWTMRD+Y
Sbjct: 3    KDVEEGEISDTASVEEISEEDFKIKQEEVVKVVKET---KPIKVGGGEAAARVWTMRDLY 59

Query: 1107 -KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQSE-------------- 979
             KYP I R Y  GL+NLAWAQAVQNKPL+E+FVM  + D  SK+S               
Sbjct: 60   NKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSSPASSVASVNSGAAA 119

Query: 978  -------MEKVVIDVEDDDL-KPRXXXXXXXXEIDLDADVLDSKEANFIKEQLQSVTLDE 823
                   +EKVVID   D++ K          E+DL+++  + K +  +KE+++ + ++ 
Sbjct: 120  GKDDKKVVEKVVIDDSGDEIEKEEGELEEGEIELDLESES-NEKVSEQVKEEMKLINVES 178

Query: 822  T----------DKSFPVVCSKLQSSLDSLGEL--DVSVPGNDHLIQLFMTALQTINSVFC 679
                       D SF  VCSKL+ +L+SL EL  + +VP  D LIQL  +A+Q+++SVFC
Sbjct: 179  IREALESVLRGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFC 238

Query: 678  SMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQD 499
            SMN   KE+N++ILSRLL   KS  P L SS Q+KE++A++ S+   A  ++ E+D    
Sbjct: 239  SMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRA--NDKEKDMLAM 296

Query: 498  NGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKAR 319
            +G+   D N+    +ENA  D N   K      S        Q+   E+ KP     ++R
Sbjct: 297  HGVNGKDSNI---VTENAVNDLNFKEKVPLPVDSLM------QNKPLEASKPGPPGYRSR 347

Query: 318  GVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFE-KGNSLLHS- 145
            GV +PLLD HK HD D+LPSPTR+  P  PV  A     G VK  +   +   N+ +H  
Sbjct: 348  GVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKT 407

Query: 144  --YETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
              YETDAL+  SSYQQKF R+S F++ +LPSPTP
Sbjct: 408  PHYETDALRAFSSYQQKFGRNSFFMNSELPSPTP 441


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|557541054|gb|ESR52098.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score =  265 bits (677), Expect = 4e-68
 Identities = 190/454 (41%), Positives = 261/454 (57%), Gaps = 42/454 (9%)
 Frame = -1

Query: 1284 QDVEEGEISDSASVEEISEDAFK-RQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDVY 1108
            +DVEEGEISD+ASVEEISE+ FK +Q+   KVV               +A+RVWTMRD+Y
Sbjct: 3    KDVEEGEISDTASVEEISEEDFKIKQEEVVKVVKET---KPIKVGGGEAAARVWTMRDLY 59

Query: 1107 -KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQSE-------------- 979
             KYP I R Y  GL+NLAWAQAVQNKPL+E+FVM  + D  SK+S               
Sbjct: 60   NKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSSPASSVASVNSGAAA 119

Query: 978  -------MEKVVIDVEDDDL-KPRXXXXXXXXEIDLDADVLDSKEANFIKEQLQSVTLDE 823
                   +EKVVID   D++ K          E+DL+++  + K +  +KE+++ + ++ 
Sbjct: 120  GKDDKKVVEKVVIDDSGDEIEKEEGELEEGEIELDLESES-NEKVSEQVKEEMKLINVES 178

Query: 822  T----------DKSFPVVCSKLQSSLDSLGEL--DVSVPGNDHLIQLFMTALQTINSVFC 679
                       D SF  VCSKL+ +L+SL EL  + +VP  D LIQL  +A+Q+++SVFC
Sbjct: 179  IREALESVLRGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFC 238

Query: 678  SMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQD 499
            SMN   KE+N++ILSRLL   KS  P L SS Q+KE++A++ S+   A  ++ E+D    
Sbjct: 239  SMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRA--NDKEKDMLAM 296

Query: 498  NGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKAR 319
            +G+   D N+    +ENA  D N   K      S        Q+   E+ KP     ++R
Sbjct: 297  HGVNGKDSNI---VTENAVNDLNFKEKVPLPVDSLM------QNKPLEASKPGPPGYRSR 347

Query: 318  GVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFE-KGNSLLHS- 145
            GV +PLLD HK HD D+LPSPTR+  P  PV  A     G VK  +   +   N+ +H  
Sbjct: 348  GVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKT 407

Query: 144  --YETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
              YETDAL+  SSYQQKF R+S F++ +LPSPTP
Sbjct: 408  PHYETDALRAFSSYQQKFGRNSFFMNSELPSPTP 441


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|567892677|ref|XP_006438859.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541053|gb|ESR52097.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541055|gb|ESR52099.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score =  265 bits (677), Expect = 4e-68
 Identities = 190/454 (41%), Positives = 261/454 (57%), Gaps = 42/454 (9%)
 Frame = -1

Query: 1284 QDVEEGEISDSASVEEISEDAFK-RQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDVY 1108
            +DVEEGEISD+ASVEEISE+ FK +Q+   KVV               +A+RVWTMRD+Y
Sbjct: 3    KDVEEGEISDTASVEEISEEDFKIKQEEVVKVVKET---KPIKVGGGEAAARVWTMRDLY 59

Query: 1107 -KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQSE-------------- 979
             KYP I R Y  GL+NLAWAQAVQNKPL+E+FVM  + D  SK+S               
Sbjct: 60   NKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSSPASSVASVNSGAAA 119

Query: 978  -------MEKVVIDVEDDDL-KPRXXXXXXXXEIDLDADVLDSKEANFIKEQLQSVTLDE 823
                   +EKVVID   D++ K          E+DL+++  + K +  +KE+++ + ++ 
Sbjct: 120  GKDDKKVVEKVVIDDSGDEIEKEEGELEEGEIELDLESES-NEKVSEQVKEEMKLINVES 178

Query: 822  T----------DKSFPVVCSKLQSSLDSLGEL--DVSVPGNDHLIQLFMTALQTINSVFC 679
                       D SF  VCSKL+ +L+SL EL  + +VP  D LIQL  +A+Q+++SVFC
Sbjct: 179  IREALESVLRGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFC 238

Query: 678  SMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQD 499
            SMN   KE+N++ILSRLL   KS  P L SS Q+KE++A++ S+   A  ++ E+D    
Sbjct: 239  SMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRA--NDKEKDMLAM 296

Query: 498  NGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKAR 319
            +G+   D N+    +ENA  D N   K      S        Q+   E+ KP     ++R
Sbjct: 297  HGVNGKDSNI---VTENAVNDLNFKEKVPLPVDSLM------QNKPLEASKPGPPGYRSR 347

Query: 318  GVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFE-KGNSLLHS- 145
            GV +PLLD HK HD D+LPSPTR+  P  PV  A     G VK  +   +   N+ +H  
Sbjct: 348  GVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKT 407

Query: 144  --YETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
              YETDAL+  SSYQQKF R+S F++ +LPSPTP
Sbjct: 408  PHYETDALRAFSSYQQKFGRNSFFMNSELPSPTP 441


>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
            notabilis]
          Length = 1301

 Score =  263 bits (671), Expect = 2e-67
 Identities = 190/490 (38%), Positives = 259/490 (52%), Gaps = 71/490 (14%)
 Frame = -1

Query: 1305 MEECNPVQDVEEGEISDSASVEEISEDAFKRQDP----PTKVVSSNLTXXXXXXXXXNSA 1138
            +E    V+DVEEGEISDSASVEEISE+ F +Q+       KV+S +              
Sbjct: 4    IESGRVVEDVEEGEISDSASVEEISEEDFNKQEGNGTGSGKVMSVS---DSNSKESKFGD 60

Query: 1137 SRVWTMRDVY-KYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQ-------- 985
            SRVWTMRD+Y  YP  R Y  GLYNLAWAQAVQNKPL+E+FVM  D  +S +        
Sbjct: 61   SRVWTMRDLYANYPGFRGYTTGLYNLAWAQAVQNKPLNEIFVMDVDADDSSRVVLSSASP 120

Query: 984  -------------SEMEKVVIDVEDDDLKPRXXXXXXXXEIDLDADV------------- 883
                          E+EKV   V DD             EIDL+++              
Sbjct: 121  AVNSGRREGKNGVKEVEKVEKVVIDDSADEMEEGELEEGEIDLESEPTQKPAGEEAKDGD 180

Query: 882  ------------LDS------KEANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSL--- 766
                        +DS      K  + I E L SV +   +KSF  VCS+LQ +L+SL   
Sbjct: 181  LNCEAENVGGLEVDSRRDELEKRVDLIWETLGSVNVVNAEKSFEEVCSRLQRTLESLRGV 240

Query: 765  -GELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLS 589
              E + S P  D +IQ+ +TA+Q +NSVFCSM+ + KE+ ++ LSRL    K+    L S
Sbjct: 241  LSEKEFSFPTKDVVIQMSITAIQVVNSVFCSMSVNQKEQKKETLSRLFCSVKNCGTPLFS 300

Query: 588  SEQLKEVDAVILSVN-----QSAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSL 424
             EQ KE++ +I S+N      S+ +S+ E++      +  +D N+++ ++ENA+++  S+
Sbjct: 301  PEQTKEIELMISSLNPLNVLPSSGASDKEKETQIIERLHEMDSNLTNANAENASIERTSV 360

Query: 423  NKYDSDAVSTKSSGLKEQSVSF-ESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRK 247
             K   D V   +S +    ++  E  +P     K RG+ +PLLDLHKDHD D+LPSPTR+
Sbjct: 361  -KLPQDCV---ASVVHSNPITLPELLRPGTLAFKGRGLLLPLLDLHKDHDADSLPSPTRE 416

Query: 246  IGPQFPVAIASTQAQGTVKRESPIFEKG----NSLLHSYETDALKIVSSYQQKFDRSSLF 79
                FPV      A G +K  S   +       S LH YETDALK VS+YQQKF R S  
Sbjct: 417  APSCFPVYKPLGVADGIIKPVSTTAKVAPGAEESRLHRYETDALKAVSTYQQKFGRGSFL 476

Query: 78   VSKKLPSPTP 49
            +S +LPSPTP
Sbjct: 477  MSDRLPSPTP 486


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score =  258 bits (660), Expect = 4e-66
 Identities = 191/483 (39%), Positives = 250/483 (51%), Gaps = 65/483 (13%)
 Frame = -1

Query: 1302 EECNPVQDVEEGEISDSASVEEISEDAFKRQDP---PTKVVSSNLTXXXXXXXXXNSASR 1132
            +E   ++DVEEGEISD+ASVEEISE+ F + D    P  VV S            N  +R
Sbjct: 4    DEILKIEDVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSK---------DSNRETR 54

Query: 1131 VWTMRDVYK-YPISRD-YARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQS------- 982
            VWTM D+YK YP  R  YA GLYNLAWAQAVQNKPL+++FVM  D D  SK S       
Sbjct: 55   VWTMSDLYKNYPAMRHGYASGLYNLAWAQAVQNKPLNDIFVMEADLDEKSKHSSSTPFGN 114

Query: 981  ----------EMEKVVIDVEDDDLK------PRXXXXXXXXEIDLDA----DVLDSKE-- 868
                      E ++VVID   D++        +        EID+D     +V DSK   
Sbjct: 115  AKDDGSNTTKEEDRVVIDDSGDEMNCDNANGEKEEGELEEGEIDMDTEFVEEVADSKAML 174

Query: 867  -----------------------ANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGEL 757
                                     FI++ L  VT+D   KSF  VCS++ SS+++  EL
Sbjct: 175  SDSRDMDINGQEFDLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVEL 234

Query: 756  --DVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSE 583
                 VP  D LIQ    AL+ INSVFCSMN S KEE+++ LSRLL + K+  P L S E
Sbjct: 235  LQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPE 294

Query: 582  QLKEVDAVILSVNQ-----SAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNK 418
            Q+K V+  + S +      S   S  E +    NG+K +D   ++ S+ +        NK
Sbjct: 295  QIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSS---QLTPSNK 351

Query: 417  YDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGP 238
              SD++     G    ++  E  +  +++ K RG  +PLLDLHKDHD D+LPSPTR+   
Sbjct: 352  LASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTRE--- 408

Query: 237  QFPVAIASTQAQGTVKRESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPS 58
                 I S Q  G    +   F    S  H YETDALK VS+YQQKF RSS  ++ +LPS
Sbjct: 409  --APTIFSVQKSGNAPTKM-AFPVDGSRSHPYETDALKAVSTYQQKFGRSSFSMADRLPS 465

Query: 57   PTP 49
            PTP
Sbjct: 466  PTP 468


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Cucumis sativus]
          Length = 1249

 Score =  258 bits (660), Expect = 4e-66
 Identities = 191/483 (39%), Positives = 250/483 (51%), Gaps = 65/483 (13%)
 Frame = -1

Query: 1302 EECNPVQDVEEGEISDSASVEEISEDAFKRQDP---PTKVVSSNLTXXXXXXXXXNSASR 1132
            +E   ++DVEEGEISD+ASVEEISE+ F + D    P  VV S            N  +R
Sbjct: 4    DEILKIEDVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSK---------DSNRETR 54

Query: 1131 VWTMRDVYK-YPISRD-YARGLYNLAWAQAVQNKPLDELFVMTTD-DSNSKQS------- 982
            VWTM D+YK YP  R  YA GLYNLAWAQAVQNKPL+++FVM  D D  SK S       
Sbjct: 55   VWTMSDLYKNYPAMRHGYASGLYNLAWAQAVQNKPLNDIFVMEADLDEKSKHSSSTPFGN 114

Query: 981  ----------EMEKVVIDVEDDDLK------PRXXXXXXXXEIDLDA----DVLDSKE-- 868
                      E ++VVID   D++        +        EID+D     +V DSK   
Sbjct: 115  AKDDGSNTTKEEDRVVIDDSGDEMNCDNANGEKEEGELEEGEIDMDTEFVEEVADSKAML 174

Query: 867  -----------------------ANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGEL 757
                                     FI++ L  VT+D   KSF  VCS++ SS+++  EL
Sbjct: 175  SDSRDMDINGQEFDLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVEL 234

Query: 756  --DVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSE 583
                 VP  D LIQ    AL+ INSVFCSMN S KEE+++ LSRLL + K+  P L S E
Sbjct: 235  LQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPE 294

Query: 582  QLKEVDAVILSVNQ-----SAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNK 418
            Q+K V+  + S +      S   S  E +    NG+K +D   ++ S+ +        NK
Sbjct: 295  QIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSS---QLTPSNK 351

Query: 417  YDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGP 238
              SD++     G    ++  E  +  +++ K RG  +PLLDLHKDHD D+LPSPTR+   
Sbjct: 352  LASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTRE--- 408

Query: 237  QFPVAIASTQAQGTVKRESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPS 58
                 I S Q  G    +   F    S  H YETDALK VS+YQQKF RSS  ++ +LPS
Sbjct: 409  --APTIFSVQKSGNAPTKM-AFPVDGSRSHPYETDALKAVSTYQQKFGRSSFSMADRLPS 465

Query: 57   PTP 49
            PTP
Sbjct: 466  PTP 468


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  258 bits (660), Expect = 4e-66
 Identities = 181/468 (38%), Positives = 254/468 (54%), Gaps = 55/468 (11%)
 Frame = -1

Query: 1287 VQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDV- 1111
            ++DVEEGEISDSASVEEISE+ F +Q+   +V+               + +RVWTMRD+ 
Sbjct: 12   IEDVEEGEISDSASVEEISEEDFNKQE--VRVLRE---------AKPKADTRVWTMRDLQ 60

Query: 1110 --YKY-PISRDYARGLYNLAWAQAVQNKPLDELFVM-------------TTDDSNSKQSE 979
              YKY      Y   LYNLAWAQAVQNKPL+++FVM             T+ D +S   E
Sbjct: 61   DLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTSRDDSSSAKE 120

Query: 978  MEKVVID-------VEDDDLKPRXXXXXXXXEIDLDAD--------VLDSKEANF----- 859
            + KV+ID       V+ DD+  +        EIDLD++        VLD  E        
Sbjct: 121  VAKVIIDDSGDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKER 180

Query: 858  --------IKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGEL-------DVSVPGNDHLI 724
                    I+E L+SVT+ E +KSF  VCS+LQ++L SL ++       + SVP  D L 
Sbjct: 181  ELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALA 240

Query: 723  QLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVN 544
            Q  + A++ +N VFCSMN + KE N+D+ SRLL   +     + S + +KEV+ ++  ++
Sbjct: 241  QQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLD 300

Query: 543  QSAVSSNIEEDNDQDNGIKVLD---MNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKE 373
              A  S+ E  +D+ N ++V D    N+   S E++   F S  K   D++S +S     
Sbjct: 301  TPAAQSSAEA-SDKVNDVQVTDGMNRNILDSSVESSGRAFASAKKLSLDSISVESYNQNN 359

Query: 372  QSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTV 193
                 ++ KP L++S+ R +  PLLDLHKDHDED+LPSPT K    FPV       +  +
Sbjct: 360  P----DALKPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPV------NKSEL 409

Query: 192  KRESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
                   E  +S++H YETDALK VS+YQQKF  +S     KLPSPTP
Sbjct: 410  VTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTP 457


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343308|gb|EEE79627.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  247 bits (631), Expect = 1e-62
 Identities = 177/461 (38%), Positives = 238/461 (51%), Gaps = 34/461 (7%)
 Frame = -1

Query: 1329 KKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXX 1150
            K +T S        ++DVEEGEISD+ASVEEISED F +Q+    VV    T        
Sbjct: 3    KNETASAAANGSGKMEDVEEGEISDTASVEEISEDDFNKQE----VVVVKETPSSTTNNN 58

Query: 1149 XNSASRVWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFV-MTTDDS-------- 997
             +S  +VWT+RD+YKY +   Y  GLYNLAWAQAVQNKPL+ELFV +  DDS        
Sbjct: 59   SSSKQKVWTVRDLYKYQVGGGYMSGLYNLAWAQAVQNKPLNELFVEVEVDDSSQKSSVSS 118

Query: 996  -NSKQSEMEKVVIDVEDDDLK-------PRXXXXXXXXEIDLDAD---------VLDSKE 868
             NS + +   VVID   D++         +        EIDLD++         V   K 
Sbjct: 119  VNSSKEDKRTVVIDDSGDEMDVVKVIDIEKEEGELEEGEIDLDSEGKSEGGMVSVDTEKR 178

Query: 867  ANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGEL----DVSVPGNDHLIQLFMTALQ 700
               I+E L+SV++ + DKSF  VC KL ++L+SL EL    +   P  D L++L  TA+ 
Sbjct: 179  VKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLLFTAIG 238

Query: 699  TINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNI 520
             +NS F SMNQ  KE+N+ +  R L    S  P+  S E  KEV                
Sbjct: 239  AVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEVC--------------- 283

Query: 519  EEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPV 340
                D  N     D  +      +   D  ++N+  S A S   +   + + S E  KP 
Sbjct: 284  ----DFCN----FDFRIV-----SLCYDLTTMNRLPSAAESFVHN---KPNFSIEPPKPG 327

Query: 339  LANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFEKGN 160
            + + K+RGV +PLLDL K HDED+LPSPTR+  P FPV        G +    P+ +  +
Sbjct: 328  VPSFKSRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVAS 387

Query: 159  ----SLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
                  +H YETDALK VSSYQ+KF+ +S F + +LPSPTP
Sbjct: 388  ITEEPRVHPYETDALKAVSSYQKKFNLNSFF-TNELPSPTP 427


>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
            gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
            3 [Populus trichocarpa]
          Length = 1190

 Score =  239 bits (610), Expect = 3e-60
 Identities = 170/436 (38%), Positives = 238/436 (54%), Gaps = 23/436 (5%)
 Frame = -1

Query: 1287 VQDVEEGEISDSASVEEISEDAFKRQDPPT--KVVSSNLTXXXXXXXXXNSASRVWTMRD 1114
            ++DVEEGEISD+ASVEEISE+ F +Q+     +  SSN           NS+ +VWT+RD
Sbjct: 15   IEDVEEGEISDTASVEEISEEDFNKQEVVIVKETPSSN-----------NSSQKVWTVRD 63

Query: 1113 VYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQSEMEKVVIDVEDDDLKP 934
            +YKY +   Y  GLYNLAWA+AVQNKPL+EL V+  DDS  +   ++ + I+ E+ +L+ 
Sbjct: 64   LYKYQVGGGYMSGLYNLAWARAVQNKPLNELTVV-IDDSGDEMDVVKVIDIEKEEGELE- 121

Query: 933  RXXXXXXXXEIDLDAD--VLDSK---------EANFIKEQLQSVTLDETDKSFPVVCSKL 787
                     EIDLD++  V+ S+             I++ L+SV++ ET+KSF  VC KL
Sbjct: 122  -------EGEIDLDSEPVVVQSEGMVSVDVENRVKSIRKDLESVSVIETEKSFEAVCLKL 174

Query: 786  QSSLDSLGEL----DVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIH 619
               L+SL EL    D S P  D L+QL   A++ +NSVFCSMN+  KE+N+ + SR    
Sbjct: 175  HKVLESLKELVGGNDNSFPSKDGLVQLLFMAIRVVNSVFCSMNKKLKEQNKGVFSRFFSL 234

Query: 618  AKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANL 439
              S  P   S  Q KE                            VL+ N +   ++ A  
Sbjct: 235  LNSHYPPFFSPGQNKE----------------------------VLNENHNDSLAKTAGY 266

Query: 438  DFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPS 259
            D  ++++    A  T       +S+      P + + K+RGV +PLLDL K HDED+LPS
Sbjct: 267  DLTTMSE-KLPAAETFVQNKPNKSIEAPK-PPGVPSFKSRGVLLPLLDLKKYHDEDSLPS 324

Query: 258  PTRKIGPQFPVAIASTQAQGTVK------RESPIFEKGNSLLHSYETDALKIVSSYQQKF 97
            PT++  P FPV        G V       + +P+ E+    +H YETDALK VSSYQQKF
Sbjct: 325  PTQETTP-FPVQRLLAIGDGMVSSGLPVPKVTPVAEEPR--MHPYETDALKAVSSYQQKF 381

Query: 96   DRSSLFVSKKLPSPTP 49
            +R+S F + +LPSPTP
Sbjct: 382  NRNSFF-TNELPSPTP 396


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  234 bits (597), Expect = 8e-59
 Identities = 163/439 (37%), Positives = 231/439 (52%), Gaps = 26/439 (5%)
 Frame = -1

Query: 1287 VQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNSASRVWTMRDV- 1111
            ++DVEEGEISDSASVEEISE+ F +Q+   +V+               + +RVWTMRD+ 
Sbjct: 52   IEDVEEGEISDSASVEEISEEDFNKQE--VRVLRE---------AKPKADTRVWTMRDLQ 100

Query: 1110 --YKY-PISRDYARGLYNLAWAQAVQNKPLDELFVMTTDDSNSKQ------SEMEKVVID 958
              YKY      Y   LYNLAWAQAVQNKPL+++FV+  D  +         SE E+  ++
Sbjct: 101  DLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVIIDDSGDEMDVKMDDVSEKEEGELE 160

Query: 957  VEDDDLKPRXXXXXXXXEIDLDADVLDSKEANF------IKEQLQSVTLDETDKSFPVVC 796
              + DL            +D++   +D KE         I+E L+SVT+ E +KSF  VC
Sbjct: 161  EGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVC 220

Query: 795  SKLQSSLDSLGEL-------DVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEENRDIL 637
            S+LQ++L SL ++       + SVP  D L Q  + A++ +N VFCSMN + KE N+D+ 
Sbjct: 221  SRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVF 280

Query: 636  SRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKVLD---MNVS 466
            SRLL   +     + S + +KEV+ ++  ++  A  S+ E  +D+ N ++V D    N+ 
Sbjct: 281  SRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEA-SDKVNDVQVTDGMNRNIL 339

Query: 465  HKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHK 286
              S E++   F S  K+                             + R +  PLLDLHK
Sbjct: 340  DSSVESSGRAFASAKKF-----------------------------RGRFIFGPLLDLHK 370

Query: 285  DHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRESPIFEKGNSLLHSYETDALKIVSSYQ 106
            DHDED+LPSPT K    FPV       +  +       E  +S++H YETDALK VS+YQ
Sbjct: 371  DHDEDSLPSPTGKAPQCFPV------NKSELVTAKVAHETQDSIMHPYETDALKAVSTYQ 424

Query: 105  QKFDRSSLFVSKKLPSPTP 49
            QKF  +S     KLPSPTP
Sbjct: 425  QKFGLTSFLPIDKLPSPTP 443


>ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1261

 Score =  233 bits (594), Expect = 2e-58
 Identities = 179/481 (37%), Positives = 247/481 (51%), Gaps = 56/481 (11%)
 Frame = -1

Query: 1323 KTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXN 1144
            + L ++ +     +DVEEGEISD+ASVEEIS + F +QD   K++++N            
Sbjct: 10   EVLGKLEKMGKEAEDVEEGEISDTASVEEISAEDFNKQD--VKLLNNN-------NKPNG 60

Query: 1143 SASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD---DSNSKQSE 979
            S +RVW + D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM  D   ++NS ++ 
Sbjct: 61   SDARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNRNS 120

Query: 978  MEK-----------VVIDVE-----------DDDLKPRXXXXXXXXEI-------DLDAD 886
              +           VV+DV+           D D +P          +       D+  D
Sbjct: 121  SHRLASVAVNPKDVVVVDVDKEEGELEEGEIDADAEPEGEAESVVVAVSDSEKLDDVKMD 180

Query: 885  VLDSKEANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGELDVSVPGN---DHLIQLF 715
            V DS++    +  L+ VT+    +SF   CSKLQ++L  +    +S P     D L++L 
Sbjct: 181  VSDSEQLG-ARGVLEGVTVANVVESFAQTCSKLQNTLPEV----LSRPAGSEKDDLVRLS 235

Query: 714  MTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPA-LLSSEQLKEV-------DAV 559
              A + + SVFCSM+ S KE+N+D + RLL   K Q  A L S E +KE+       D+V
Sbjct: 236  FNATEVVYSVFCSMDSSEKEQNKDSILRLLSFVKDQQQAQLFSPEHVKEIQGMMTAIDSV 295

Query: 558  ILSVNQSAVSSNIE----EDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKYDSDA---V 400
               VN  A+    E    E   Q+N    + ++   K+ EN  ++   L  Y       +
Sbjct: 296  GALVNSEAIGKEKELQTTEIKTQENSAVEVQIH-EIKTQENQAVEAAELISYSKPLHRDI 354

Query: 399  STKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAI 220
            +  S  LK    S           K RGV +PLLDLHKDHD D+LPSPTR+    FPV  
Sbjct: 355  TGTSQALKFGQNSI----------KGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVNK 404

Query: 219  ASTQAQGTVKRESPI----FEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPT 52
              +  +  V+  S       +   S  H YETDALK VS+YQQKF RSSLF + K PSPT
Sbjct: 405  LLSVGESMVRSGSASAKMELDSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKFPSPT 464

Query: 51   P 49
            P
Sbjct: 465  P 465


>ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1257

 Score =  233 bits (593), Expect = 2e-58
 Identities = 184/494 (37%), Positives = 253/494 (51%), Gaps = 58/494 (11%)
 Frame = -1

Query: 1356 IYLFILRKEKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNL 1177
            I+  +L  EK   L +M +E   V+DVEEGEISD+ASVEEIS + F +QD   KV+++N 
Sbjct: 2    IFGSLLDCEKLGKLEKMGKE---VEDVEEGEISDTASVEEISAEDFNKQD--VKVLNNN- 55

Query: 1176 TXXXXXXXXXNSASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD 1003
                       S +RVW + D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM  D
Sbjct: 56   ------NKPNGSDARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVD 109

Query: 1002 -----DSNSKQSEM---------EKVVIDVEDDDLKPRXXXXXXXXEIDLDAD------- 886
                 +SNS  S           + VV+DV+ ++            EID DA+       
Sbjct: 110  SDANANSNSNNSNRLASVAVNPKDVVVVDVDKEE------GELEEGEIDADAEPEGEAES 163

Query: 885  ------VLDSKEANFIKEQ------------LQSVTLDETDKSFPVVCSKLQSSLDSLGE 760
                  V DS++ + +K              L+ VT+    +SF   CSKLQ++L  +  
Sbjct: 164  VVAVPVVSDSEKLDDVKRDVSNSEQLGVRGVLEGVTVANVAESFAQTCSKLQNALPEV-- 221

Query: 759  LDVSVPGN---DHLIQLFMTALQTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPA-LL 592
              +S P +   D L++L   A + + SVFCSM+   KE+N+D + RLL   K Q  A L 
Sbjct: 222  --LSRPADSERDDLVRLSFNATEVVYSVFCSMDSLKKEQNKDSILRLLSFVKDQQQAQLF 279

Query: 591  SSEQLKEVDAVILSVNQSAVSSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKYD 412
            S E +KE+  ++ +++      N E    ++  ++        K+ EN  ++   L  Y+
Sbjct: 280  SPEHIKEIQGMMTAIDYFGALVNSEAIG-KEKELQTTVQTHEIKTQENQAVEAAELISYN 338

Query: 411  ----SDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKI 244
                SD +   S  LK    S           K RGV +PLLDLHKDHD D+LPSPTR+ 
Sbjct: 339  KPLHSDIIGA-SHALKFGQNSI----------KGRGVLLPLLDLHKDHDADSLPSPTREA 387

Query: 243  GPQFPV---------AIASTQAQGTVKRESPIFEKGNSLLHSYETDALKIVSSYQQKFDR 91
               FPV          ++S  A    +      +   S  H YETDALK VS+YQQKF R
Sbjct: 388  PSCFPVNKLLSVGEPMVSSGSAAAKPESGKMELDSEGSKFHLYETDALKAVSTYQQKFGR 447

Query: 90   SSLFVSKKLPSPTP 49
            SSLF + K PSPTP
Sbjct: 448  SSLFTNDKFPSPTP 461


>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Fragaria vesca subsp. vesca]
          Length = 1230

 Score =  231 bits (588), Expect = 9e-58
 Identities = 167/451 (37%), Positives = 235/451 (52%), Gaps = 33/451 (7%)
 Frame = -1

Query: 1302 EECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXXXXNSASRVWT 1123
            E    V DVEEGEI DS SVEEISE+ F +Q+       SN              +R WT
Sbjct: 5    ESSREVVDVEEGEIPDSNSVEEISEEDFVKQESKAVEPKSN--------GGSGDGARFWT 56

Query: 1122 MRDVYKYPISRDYARG-LYNLAWAQAVQNKPLDELFVMTTDDSNSKQSEMEK-------- 970
              +V  +P  R    G L NLAWAQAVQNKP ++L V    D  SKQ + ++        
Sbjct: 57   FHEVLAHPHFRGIGGGGLANLAWAQAVQNKPFNDLLVKLDSDEKSKQQQQQRSSVSSGNE 116

Query: 969  --VVIDVEDDDLKPRXXXXXXXXEIDLDADVLDS-------------KEANFIKEQLQSV 835
              V+ID  D+    +        EI  D++  D+             K  N ++E L+S+
Sbjct: 117  KVVIIDSGDEMDVEKEEEELEEGEIGFDSECGDNDKAAGSVGNGVWEKRVNLLREALESL 176

Query: 834  TLDETDKSFPVVCSKLQSSLDSLGEL--DVSVPGNDHLIQLFMTALQTINSVFCSMNQSN 661
            T+ E +KSF  VC +   SL+SL  +  +++V   + L+Q    A++ I+SVF SM+   
Sbjct: 177  TITEAEKSFGDVCHRFLDSLESLRGVLSEINVSTKEALVQQLFNAVRAISSVFRSMSADQ 236

Query: 660  KEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQSAVSSNIEEDNDQD-NGIKV 484
            KE+N+D+LSR+L  AKS  P+   +EQLKE++ +  S++     +  +E+  Q  NG+  
Sbjct: 237  KEQNKDVLSRILSSAKSD-PSPFPAEQLKEIEVMSSSMDSPQTKAGTKENGIQCINGVYK 295

Query: 483  LDMNVSHKSSENANLDFNSLNKYDSDA-VSTKSSGLKEQSVSFESFKPVLANSKARGVSI 307
             D   S  S  NA+  F       SD  VS   S     ++S E  +   ++ K RG+ +
Sbjct: 296  TD---SDTSGANASHVFTYAANTGSDTQVSVVHSN---PNISSEVPRSGSSSFKGRGLML 349

Query: 306  PLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKRES-----PIFEKGNSLLHSY 142
            PLLDLH DHDED+LPSPTR+    FP         G VK+          +   S +H Y
Sbjct: 350  PLLDLHMDHDEDSLPSPTREPPACFPAQKPVVVENGMVKKSGWETARAALDVEGSKMHVY 409

Query: 141  ETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
            ET+ALK VSSYQQKF R+S F++ +LPSPTP
Sbjct: 410  ETEALKAVSSYQQKFSRNS-FLTSELPSPTP 439


>ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like isoform X2 [Cicer arietinum]
          Length = 1227

 Score =  228 bits (581), Expect = 6e-57
 Identities = 169/455 (37%), Positives = 233/455 (51%), Gaps = 27/455 (5%)
 Frame = -1

Query: 1332 EKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXX 1153
            E  K    M +E   V+DVEEGEISD+ASV EISE+ F +QD    VV  N         
Sbjct: 10   ENSKNFEGMGKE---VEDVEEGEISDTASVVEISEEDFNKQD----VVKVNNNSDSDKAK 62

Query: 1152 XXNSASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-DSNS--- 991
                A RVW + D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM  D DSN+   
Sbjct: 63   TGGDA-RVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDSNANVV 121

Query: 990  -------KQSEMEKVVIDVEDDDLKPRXXXXXXXXEIDLDADVLDSKEANFIKEQLQSVT 832
                   ++ E+E+  ID +DD              + +  D  ++   + I++ L+ VT
Sbjct: 122  MVDDDEREEGELEEGEIDGDDDT-----------GGVMVGGDGSETVSESDIRDFLEGVT 170

Query: 831  LDETDKSFPVVCSKLQSSLDSLGELDVSVPGNDHLIQLFMTALQTINSVFCSMNQSNKEE 652
            +    +SF    S+L   L S      +V   D++I+L   A++ ++SVFCSM+   KE+
Sbjct: 171  VANVAESFAETISRLLRVLQSKLLSGPAVSEKDYVIRLLYNAIEIVHSVFCSMDNLQKED 230

Query: 651  NRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQ-SAVSSNIEEDNDQDNGIKVLDM 475
            N+D + RLL   K++   L S E +KE+  +I +++   A+ +++   N +   +  LD+
Sbjct: 231  NKDNIIRLLYFLKNEHTQLFSPEHMKEIQVMITAIDTVDALGNSVVVGNGEK--LDTLDI 288

Query: 474  NVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLANSKARGVSIPLLD 295
                     A+   +S     S+      + L  QS           N K RGV +PL D
Sbjct: 289  KTRQIQGLKASELISSSKLVHSNLTEASEALLSGQS-----------NIKGRGVMLPLFD 337

Query: 294  LHKDHDEDTLPSPTRKIGPQFPV-------------AIASTQAQGTVKRESPIFEKGNSL 154
            LHK HD D+LPSPTR+    FPV              + S      VK E    +  NS 
Sbjct: 338  LHKVHDLDSLPSPTREAPSFFPVNKLFSVGDGMDRPGLPSAGKTEAVKME---LDTENSK 394

Query: 153  LHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
             H YETDALK VS+YQQKF RSS F   K PSPTP
Sbjct: 395  NHLYETDALKAVSTYQQKFGRSSYFTDDKFPSPTP 429


>ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphatase-like protein
            [Medicago truncatula] gi|355496659|gb|AES77862.1| RNA
            polymerase II C-terminal domain phosphatase-like protein
            [Medicago truncatula]
          Length = 1213

 Score =  226 bits (576), Expect = 2e-56
 Identities = 169/473 (35%), Positives = 238/473 (50%), Gaps = 41/473 (8%)
 Frame = -1

Query: 1344 ILRKEKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDP------PTKVVSS 1183
            +L  E  K L EM +E   V+DVEEGEISDSAS+EEI+E+ FK+ D         K   S
Sbjct: 6    LLDFEISKNLIEMGKE---VEDVEEGEISDSASLEEITEEDFKKGDDVKVNNSDVKTDKS 62

Query: 1182 NLTXXXXXXXXXNSASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMT 1009
            +              SRVW ++D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM 
Sbjct: 63   DNKVKTGGGGGGGGDSRVWAVQDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVME 122

Query: 1008 TD--------DSNSKQSEMEKV---VIDVEDDDLKPRXXXXXXXXEIDLDADVLDSKEAN 862
             D        +S +K  E+ K    ++ V+DDD K          + D D D +     N
Sbjct: 123  LDKNANANSNNSGNKDGELNKSSKEIVVVDDDDEKEEGELEEGEIDGDADDDCVIVGSEN 182

Query: 861  F-------IKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGELDVSVPGNDHLIQLFMTAL 703
            F       ++  L+ VT+    +SF   C ++Q +L S           D L++L   A+
Sbjct: 183  FSNSEVLGVRGVLEGVTVASVAESFAETCRRIQGTLQSKVFSGFDSAEKDDLVRLLFNAV 242

Query: 702  QTINSVFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVD---AVILSVNQSAV 532
            + + SVFC M+   KEEN+D +SRLL   K+Q   L + E +K+V     V+++V  S  
Sbjct: 243  EVVYSVFCCMDNLQKEENKDNISRLLSFLKNQ--HLFTMEHMKKVIFNIQVMITVIDSVF 300

Query: 531  SSNIEEDNDQDNGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSV-SFE 355
            +    E   ++  ++ L+                 +    +D   + S  + + S  + E
Sbjct: 301  ALGNNEVVGKEEKVEALNTT-------------EQIPGLKADEYISSSQLVHDNSTYASE 347

Query: 354  SFKPVLANSKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPVAIASTQAQGTVKR---- 187
            + +   +N   RG+ +PL DLHKDHD D+LPSPTR+    FPV    +     + R    
Sbjct: 348  ALQYGQSNVVGRGLMLPLFDLHKDHDLDSLPSPTREAPSCFPVNKLFSDLGDGIDRFGLP 407

Query: 186  -------ESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
                   E    +  +S LH YETDALK VS+YQQKF RSS F   K PSPTP
Sbjct: 408  PAVCTEAEKMELDGKDSKLHIYETDALKAVSTYQQKFSRSSYFTDDKFPSPTP 460


>ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like isoform X1 [Cicer arietinum]
          Length = 1247

 Score =  226 bits (575), Expect = 3e-56
 Identities = 173/467 (37%), Positives = 235/467 (50%), Gaps = 39/467 (8%)
 Frame = -1

Query: 1332 EKKKTLSEMMEECNPVQDVEEGEISDSASVEEISEDAFKRQDPPTKVVSSNLTXXXXXXX 1153
            E  K    M +E   V+DVEEGEISD+ASV EISE+ F +QD    VV  N         
Sbjct: 10   ENSKNFEGMGKE---VEDVEEGEISDTASVVEISEEDFNKQD----VVKVNNNSDSDKAK 62

Query: 1152 XXNSASRVWTMRDVY-KYP-ISRDYARGLYNLAWAQAVQNKPLDELFVMTTD-------- 1003
                A RVW + D+Y KYP I R YA GLYNLAWAQAVQNKPL+++FVM  D        
Sbjct: 63   TGGDA-RVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDSNANAN 121

Query: 1002 ---DSNSKQSEME---KVVIDVEDDDLKPRXXXXXXXXEIDLDADV---------LDSKE 868
               DSN+   ++    K V+ V+DD+   R        EID D D           ++  
Sbjct: 122  SNNDSNNGNGDLNMPLKEVVMVDDDE---REEGELEEGEIDGDDDTGGVMVGGDGSETVS 178

Query: 867  ANFIKEQLQSVTLDETDKSFPVVCSKLQSSLDSLGELDVSVPGNDHLIQLFMTALQTINS 688
             + I++ L+ VT+    +SF    S+L   L S      +V   D++I+L   A++ ++S
Sbjct: 179  ESDIRDFLEGVTVANVAESFAETISRLLRVLQSKLLSGPAVSEKDYVIRLLYNAIEIVHS 238

Query: 687  VFCSMNQSNKEENRDILSRLLIHAKSQIPALLSSEQLKEVDAVILSVNQ-SAVSSNIEED 511
            VFCSM+   KE+N+D + RLL   K++   L S E +KE+  +I +++   A+ +++   
Sbjct: 239  VFCSMDNLQKEDNKDNIIRLLYFLKNEHTQLFSPEHMKEIQVMITAIDTVDALGNSVVVG 298

Query: 510  NDQDNGIKVLDMNVSHKSSENANLDFNSLNKYDSDAVSTKSSGLKEQSVSFESFKPVLAN 331
            N +   +  LD+         A+   +S     S+      + L  QS           N
Sbjct: 299  NGEK--LDTLDIKTRQIQGLKASELISSSKLVHSNLTEASEALLSGQS-----------N 345

Query: 330  SKARGVSIPLLDLHKDHDEDTLPSPTRKIGPQFPV-------------AIASTQAQGTVK 190
             K RGV +PL DLHK HD D+LPSPTR+    FPV              + S      VK
Sbjct: 346  IKGRGVMLPLFDLHKVHDLDSLPSPTREAPSFFPVNKLFSVGDGMDRPGLPSAGKTEAVK 405

Query: 189  RESPIFEKGNSLLHSYETDALKIVSSYQQKFDRSSLFVSKKLPSPTP 49
             E    +  NS  H YETDALK VS+YQQKF RSS F   K PSPTP
Sbjct: 406  ME---LDTENSKNHLYETDALKAVSTYQQKFGRSSYFTDDKFPSPTP 449


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