BLASTX nr result

ID: Atropa21_contig00006694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00006694
         (547 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236255.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   118   8e-25
ref|XP_006344459.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   110   2e-22

>ref|XP_004236255.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Solanum
           lycopersicum]
          Length = 651

 Score =  118 bits (296), Expect = 8e-25
 Identities = 61/100 (61%), Positives = 64/100 (64%), Gaps = 7/100 (7%)
 Frame = +3

Query: 264 MSYPNYDSRYGDSGSYRQRRSDLMGPQPSMYPRPMPGKGAANYGRGGPPTY-------DX 422
           MSYPNYDSRYGDSGSYRQRRSDLMGPQPSMYPRPMPG GAA+YGRGGP  Y         
Sbjct: 1   MSYPNYDSRYGDSGSYRQRRSDLMGPQPSMYPRPMPGGGAASYGRGGPLPYGGPQAGGPP 60

Query: 423 XXXXXXXXXXXXXXXXXXXXXXFEGGYSRGSDMGRAGGFG 542
                                 FEGG++RGSDMGR GG G
Sbjct: 61  PMDGGSRGGMGGSGRVGGGYQPFEGGFARGSDMGRFGGGG 100


>ref|XP_006344459.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like isoform X1
           [Solanum tuberosum]
          Length = 648

 Score =  110 bits (275), Expect = 2e-22
 Identities = 58/100 (58%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
 Frame = +3

Query: 264 MSYPNYDSRYGDSGSYRQRRSDLMGPQPSMYPRPMPGKGAANYGRGGPPTY-------DX 422
           MSYPNYDSRYGDSGSYRQRRSDLMGPQPSMYPRPM   GAA+YGRGGP  Y         
Sbjct: 1   MSYPNYDSRYGDSGSYRQRRSDLMGPQPSMYPRPMSDGGAASYGRGGPLPYGGPQAGGPP 60

Query: 423 XXXXXXXXXXXXXXXXXXXXXXFEGGYSRGSDMGRAGGFG 542
                                 FEGG+ RGSD+GR GG G
Sbjct: 61  PMDGGSRGGMGGSGRVGGGYPPFEGGFPRGSDIGRFGGGG 100


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