BLASTX nr result

ID: Atropa21_contig00006610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00006610
         (1106 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237241.1| PREDICTED: uncharacterized protein LOC101254...   202   2e-49
ref|XP_006116416.1| PREDICTED: zinc transporter SLC39A7-like [Pe...    59   3e-06
gb|ADE74635.1| CP-interacting protein 3 [Nicotiana tabacum]            58   6e-06

>ref|XP_004237241.1| PREDICTED: uncharacterized protein LOC101254783 [Solanum
           lycopersicum]
          Length = 237

 Score =  202 bits (514), Expect = 2e-49
 Identities = 119/246 (48%), Positives = 132/246 (53%), Gaps = 6/246 (2%)
 Frame = +2

Query: 101 MGLQTDMYPSHGFKXXXXXXXXXXXXXXXXXXXXXXXXXGSSMQMKKPYGYPSVTTPQHA 280
           MGLQTDMYPS+GFK                         GSSMQMKKPYGYP+ +  Q  
Sbjct: 1   MGLQTDMYPSNGFKQQLSYYDDNDYYSSEDNYYSNN---GSSMQMKKPYGYPTSSPTQ-- 55

Query: 281 NTHMMMSHGGYSHDEDKYQSGHGQYGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 460
           N HMMMSHGGYSHD DKYQ GH    +                                H
Sbjct: 56  NHHMMMSHGGYSHD-DKYQYGH--MSHDSANSSSYGSSGFQHTSNMNGGYGSSGMQHSSH 112

Query: 461 ANDGYGSGMH-----HSSHANXXXXXXXXXXXXTNGGYGTGMQQSSHMTXXXXXXXXXXX 625
           AN GYGS M+      SSH N             +GGYG+GMQ +S+MT           
Sbjct: 113 ANAGYGSAMYGSAMQQSSHINGGYGSGMQHASHMSGGYGSGMQHTSNMT-GGCGSGMQHS 171

Query: 626 XHMNGGYGDGMQHSSHMNGGYGGGMKQSSHSHMSRGLEDDSDRNPGYYEQHNKNTD-MWN 802
             MNGGYG GM HSSHMNGGYGGGM Q SH+HMSRG+E DSDR P YYEQHN NTD MWN
Sbjct: 172 SQMNGGYGGGMHHSSHMNGGYGGGMHQYSHTHMSRGVEKDSDRKPAYYEQHNNNTDHMWN 231

Query: 803 LKSLDD 820
           +KSL+D
Sbjct: 232 MKSLND 237


>ref|XP_006116416.1| PREDICTED: zinc transporter SLC39A7-like [Pelodiscus sinensis]
          Length = 715

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 43/151 (28%), Positives = 49/151 (32%), Gaps = 1/151 (0%)
 Frame = -1

Query: 695 HPHNHRSCGKNAAFRPHSHRSCGKNIAAFRSRNHRSCGKIVAFQSHSHHSCGKSDAFHFH 516
           H H+H   G       HSH   G         +H   G       HSH   G  D  H H
Sbjct: 187 HGHSHAGHGHEDLHHGHSHAGHGHE-DLHHGHSHAGHGHEDLHHGHSHAGHGHEDLHHGH 245

Query: 515 SHHWRGKSDAFHFHSHHWRGKSTAAF-HFHSRHY*RGTCCYYCWTYLQNHETYIHIGHGH 339
           SH   G  D  H HSH   G       H H+ H            +   H  + H GHGH
Sbjct: 246 SHAGHGHEDLHHGHSHAGHGHEDLHHGHSHAGH-----------GHEDLHHGHSHAGHGH 294

Query: 338 FGTCPRRGYSHHGSSSCVYLHAEEWLQRDTH 246
                  G+SH G    V  H       D H
Sbjct: 295 EDL--HHGHSHAGHGHEVLYHGHSHSHEDLH 323


>gb|ADE74635.1| CP-interacting protein 3 [Nicotiana tabacum]
          Length = 155

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 41/144 (28%), Positives = 52/144 (36%), Gaps = 2/144 (1%)
 Frame = +2

Query: 218 GSSMQMKKPYGYPSVTTPQHANTHMMMSHGGYSHDEDKYQSGHGQYGYXXXXXXXXXXXX 397
           G SMQM +P GY ++   Q  + HMMM HGG  H       GHG  G             
Sbjct: 28  GGSMQMTRPSGYSTLPYDQSTHNHMMMGHGGQHHGGPFGGHGHGHGGQ------------ 75

Query: 398 XXXXXXXXXXXXXXXXXXXXHANDGYGSGMHHSSHA--NXXXXXXXXXXXXTNGGYGTGM 571
                                    YGS  HH +H   +            ++GGYG+GM
Sbjct: 76  -------------------------YGSHGHHGAHMPHHSANFSSSTNMVHSDGGYGSGM 110

Query: 572 QQSSHMTXXXXXXXXXXXXHMNGG 643
           QQS+HM+            H  GG
Sbjct: 111 QQSTHMSPAMGMGLTNYHGHGYGG 134


Top