BLASTX nr result
ID: Atropa21_contig00006430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00006430
(438 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364546.1| PREDICTED: mediator of RNA polymerase II tra... 86 5e-15
ref|XP_004240465.1| PREDICTED: mediator of RNA polymerase II tra... 85 1e-14
gb|EMJ28696.1| hypothetical protein PRUPE_ppa011250mg [Prunus pe... 83 3e-14
gb|EMJ26997.1| hypothetical protein PRUPE_ppa011256mg [Prunus pe... 83 4e-14
ref|XP_006466248.1| PREDICTED: mediator of RNA polymerase II tra... 82 7e-14
ref|XP_006466247.1| PREDICTED: mediator of RNA polymerase II tra... 82 7e-14
ref|XP_006426363.1| hypothetical protein CICLE_v100264431mg [Cit... 82 7e-14
ref|XP_004487937.1| PREDICTED: mediator of RNA polymerase II tra... 82 7e-14
ref|XP_004487935.1| PREDICTED: mediator of RNA polymerase II tra... 82 7e-14
ref|XP_002309971.1| hypothetical protein POPTR_0007s05200g [Popu... 80 2e-13
gb|EOX92060.1| Mediator of RNA polymerase II transcription subun... 80 3e-13
ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm... 80 3e-13
gb|EXC07341.1| hypothetical protein L484_021249 [Morus notabilis] 80 4e-13
ref|XP_004300645.1| PREDICTED: mediator of RNA polymerase II tra... 79 5e-13
ref|XP_006586689.1| PREDICTED: uncharacterized protein LOC100803... 79 8e-13
ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycin... 79 8e-13
gb|ESW26747.1| hypothetical protein PHAVU_003G144800g [Phaseolus... 78 1e-12
gb|AFK42853.1| unknown [Medicago truncatula] 78 1e-12
ref|XP_003614099.1| Mediator of RNA polymerase II transcription ... 78 1e-12
ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II tra... 77 2e-12
>ref|XP_006364546.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Solanum tuberosum]
Length = 216
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/53 (83%), Positives = 44/53 (83%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRTK 160
SSENY EVVASVSSFCEYLAPLLHLSK GVSTGVVPT SLMSDGG TK
Sbjct: 164 SSENYNEVVASVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTK 216
>ref|XP_004240465.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Solanum lycopersicum]
Length = 216
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/53 (81%), Positives = 44/53 (83%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRTK 160
SSENY EVVASV+SFCEYLAPLLHLSK GVSTGVVPT SLMSDGG TK
Sbjct: 164 SSENYNEVVASVTSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTK 216
>gb|EMJ28696.1| hypothetical protein PRUPE_ppa011250mg [Prunus persica]
Length = 217
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
+SENYTEVVA+VSSFCEYLAPLLHLSK G+STGVVPT SLMSDGG T
Sbjct: 164 TSENYTEVVAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 215
>gb|EMJ26997.1| hypothetical protein PRUPE_ppa011256mg [Prunus persica]
Length = 217
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
+SENYTEVVA++SSFCEYLAPLLHLSK G+STGVVPT SLMSDGG T
Sbjct: 164 TSENYTEVVAAISSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 215
>ref|XP_006466248.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform X2 [Citrus sinensis]
Length = 217
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
SSENYTEV ++VSSFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 164 SSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSLMSDGGGT 215
>ref|XP_006466247.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform X1 [Citrus sinensis]
Length = 234
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
SSENYTEV ++VSSFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 164 SSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSLMSDGGGT 215
>ref|XP_006426363.1| hypothetical protein CICLE_v100264431mg [Citrus clementina]
gi|557528353|gb|ESR39603.1| hypothetical protein
CICLE_v100264431mg [Citrus clementina]
Length = 217
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
SSENYTEV ++VSSFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 164 SSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSLMSDGGGT 215
>ref|XP_004487937.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform X3 [Cicer arietinum]
gi|502085527|ref|XP_004487938.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 18-like isoform
X4 [Cicer arietinum]
Length = 217
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
S+ENYTEV A+VSSFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 164 SAENYTEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 215
>ref|XP_004487935.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform X1 [Cicer arietinum]
gi|502085519|ref|XP_004487936.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 18-like isoform
X2 [Cicer arietinum]
Length = 224
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
S+ENYTEV A+VSSFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 171 SAENYTEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 222
>ref|XP_002309971.1| hypothetical protein POPTR_0007s05200g [Populus trichocarpa]
gi|222852874|gb|EEE90421.1| hypothetical protein
POPTR_0007s05200g [Populus trichocarpa]
Length = 216
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/52 (76%), Positives = 43/52 (82%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
+SENY+EV A+VSSFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 163 TSENYSEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 214
>gb|EOX92060.1| Mediator of RNA polymerase II transcription subunit 18 [Theobroma
cacao]
Length = 217
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
+SENY EVVA+VSSFCEYLAPLLHLSK G STGVVPT SLMSDGG T
Sbjct: 164 TSENYNEVVAAVSSFCEYLAPLLHLSKPGASTGVVPTAAAAAASLMSDGGGT 215
>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
gi|223527360|gb|EEF29504.1| conserved hypothetical
protein [Ricinus communis]
Length = 217
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +2
Query: 8 ENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
ENY+EVVA+VSSFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 166 ENYSEVVAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 215
>gb|EXC07341.1| hypothetical protein L484_021249 [Morus notabilis]
Length = 253
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
+SENY+EVVA+VSSFCE+LAPLLHLSK G+STGVVPT SLMSDGG T
Sbjct: 200 TSENYSEVVAAVSSFCEHLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 251
>ref|XP_004300645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Fragaria vesca subsp. vesca]
Length = 218
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
SSE YTEV ++VSSFCEYLAPLLHLSK G+STGVVPT SLMSDGG T
Sbjct: 164 SSETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 215
>ref|XP_006586689.1| PREDICTED: uncharacterized protein LOC100803031 isoform X1 [Glycine
max]
Length = 224
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
++E YTEV A+VSSFCEYLAPLLHLSK G+STGVVPT SLMSDGG T
Sbjct: 171 TAETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGST 222
>ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycine max]
gi|571475565|ref|XP_006586690.1| PREDICTED:
uncharacterized protein LOC100803031 isoform X2 [Glycine
max] gi|571475567|ref|XP_006586691.1| PREDICTED:
uncharacterized protein LOC100803031 isoform X3 [Glycine
max] gi|255638120|gb|ACU19374.1| unknown [Glycine max]
Length = 217
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
++E YTEV A+VSSFCEYLAPLLHLSK G+STGVVPT SLMSDGG T
Sbjct: 164 TAETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGST 215
>gb|ESW26747.1| hypothetical protein PHAVU_003G144800g [Phaseolus vulgaris]
gi|561028108|gb|ESW26748.1| hypothetical protein
PHAVU_003G144800g [Phaseolus vulgaris]
Length = 217
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
++E YTEV A+VSSFCEYLAPLLHLSK G+STGVVPT SLMSDGG T
Sbjct: 164 AAETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 215
>gb|AFK42853.1| unknown [Medicago truncatula]
Length = 217
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/52 (75%), Positives = 40/52 (76%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
S ENY EV A+V SFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 164 SDENYAEVAAAVQSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 215
>ref|XP_003614099.1| Mediator of RNA polymerase II transcription subunit [Medicago
truncatula] gi|355515434|gb|AES97057.1| Mediator of RNA
polymerase II transcription subunit [Medicago
truncatula]
Length = 225
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/52 (75%), Positives = 40/52 (76%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
S ENY EV A+V SFCEYLAPLLHLSK GVSTGVVPT SLMSDGG T
Sbjct: 172 SDENYAEVAAAVQSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 223
>ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
[Vitis vinifera] gi|302142417|emb|CBI19620.3| unnamed
protein product [Vitis vinifera]
Length = 216
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = +2
Query: 2 SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
SSENY+EV A+VSSFCEYLAPLLHLSK G STGVVPT SLMSD G T
Sbjct: 164 SSENYSEVAAAVSSFCEYLAPLLHLSKPGTSTGVVPTAAAAAASLMSDAGVT 215