BLASTX nr result

ID: Atropa21_contig00006430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00006430
         (438 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364546.1| PREDICTED: mediator of RNA polymerase II tra...    86   5e-15
ref|XP_004240465.1| PREDICTED: mediator of RNA polymerase II tra...    85   1e-14
gb|EMJ28696.1| hypothetical protein PRUPE_ppa011250mg [Prunus pe...    83   3e-14
gb|EMJ26997.1| hypothetical protein PRUPE_ppa011256mg [Prunus pe...    83   4e-14
ref|XP_006466248.1| PREDICTED: mediator of RNA polymerase II tra...    82   7e-14
ref|XP_006466247.1| PREDICTED: mediator of RNA polymerase II tra...    82   7e-14
ref|XP_006426363.1| hypothetical protein CICLE_v100264431mg [Cit...    82   7e-14
ref|XP_004487937.1| PREDICTED: mediator of RNA polymerase II tra...    82   7e-14
ref|XP_004487935.1| PREDICTED: mediator of RNA polymerase II tra...    82   7e-14
ref|XP_002309971.1| hypothetical protein POPTR_0007s05200g [Popu...    80   2e-13
gb|EOX92060.1| Mediator of RNA polymerase II transcription subun...    80   3e-13
ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm...    80   3e-13
gb|EXC07341.1| hypothetical protein L484_021249 [Morus notabilis]      80   4e-13
ref|XP_004300645.1| PREDICTED: mediator of RNA polymerase II tra...    79   5e-13
ref|XP_006586689.1| PREDICTED: uncharacterized protein LOC100803...    79   8e-13
ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycin...    79   8e-13
gb|ESW26747.1| hypothetical protein PHAVU_003G144800g [Phaseolus...    78   1e-12
gb|AFK42853.1| unknown [Medicago truncatula]                           78   1e-12
ref|XP_003614099.1| Mediator of RNA polymerase II transcription ...    78   1e-12
ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II tra...    77   2e-12

>ref|XP_006364546.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like [Solanum tuberosum]
          Length = 216

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 44/53 (83%), Positives = 44/53 (83%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRTK 160
           SSENY EVVASVSSFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG TK
Sbjct: 164 SSENYNEVVASVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTK 216


>ref|XP_004240465.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like [Solanum lycopersicum]
          Length = 216

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/53 (81%), Positives = 44/53 (83%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRTK 160
           SSENY EVVASV+SFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG TK
Sbjct: 164 SSENYNEVVASVTSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTK 216


>gb|EMJ28696.1| hypothetical protein PRUPE_ppa011250mg [Prunus persica]
          Length = 217

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/52 (78%), Positives = 44/52 (84%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           +SENYTEVVA+VSSFCEYLAPLLHLSK G+STGVVPT      SLMSDGG T
Sbjct: 164 TSENYTEVVAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 215


>gb|EMJ26997.1| hypothetical protein PRUPE_ppa011256mg [Prunus persica]
          Length = 217

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           +SENYTEVVA++SSFCEYLAPLLHLSK G+STGVVPT      SLMSDGG T
Sbjct: 164 TSENYTEVVAAISSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 215


>ref|XP_006466248.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like isoform X2 [Citrus sinensis]
          Length = 217

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 41/52 (78%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           SSENYTEV ++VSSFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 164 SSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSLMSDGGGT 215


>ref|XP_006466247.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like isoform X1 [Citrus sinensis]
          Length = 234

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 41/52 (78%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           SSENYTEV ++VSSFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 164 SSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSLMSDGGGT 215


>ref|XP_006426363.1| hypothetical protein CICLE_v100264431mg [Citrus clementina]
           gi|557528353|gb|ESR39603.1| hypothetical protein
           CICLE_v100264431mg [Citrus clementina]
          Length = 217

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 41/52 (78%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           SSENYTEV ++VSSFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 164 SSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSLMSDGGGT 215


>ref|XP_004487937.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like isoform X3 [Cicer arietinum]
           gi|502085527|ref|XP_004487938.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 18-like isoform
           X4 [Cicer arietinum]
          Length = 217

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 41/52 (78%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           S+ENYTEV A+VSSFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 164 SAENYTEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 215


>ref|XP_004487935.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like isoform X1 [Cicer arietinum]
           gi|502085519|ref|XP_004487936.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 18-like isoform
           X2 [Cicer arietinum]
          Length = 224

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 41/52 (78%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           S+ENYTEV A+VSSFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 171 SAENYTEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 222


>ref|XP_002309971.1| hypothetical protein POPTR_0007s05200g [Populus trichocarpa]
           gi|222852874|gb|EEE90421.1| hypothetical protein
           POPTR_0007s05200g [Populus trichocarpa]
          Length = 216

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           +SENY+EV A+VSSFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 163 TSENYSEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 214


>gb|EOX92060.1| Mediator of RNA polymerase II transcription subunit 18 [Theobroma
           cacao]
          Length = 217

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/52 (76%), Positives = 42/52 (80%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           +SENY EVVA+VSSFCEYLAPLLHLSK G STGVVPT      SLMSDGG T
Sbjct: 164 TSENYNEVVAAVSSFCEYLAPLLHLSKPGASTGVVPTAAAAAASLMSDGGGT 215


>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
           gi|223527360|gb|EEF29504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/50 (80%), Positives = 42/50 (84%)
 Frame = +2

Query: 8   ENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           ENY+EVVA+VSSFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 166 ENYSEVVAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 215


>gb|EXC07341.1| hypothetical protein L484_021249 [Morus notabilis]
          Length = 253

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/52 (75%), Positives = 44/52 (84%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           +SENY+EVVA+VSSFCE+LAPLLHLSK G+STGVVPT      SLMSDGG T
Sbjct: 200 TSENYSEVVAAVSSFCEHLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 251


>ref|XP_004300645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like [Fragaria vesca subsp. vesca]
          Length = 218

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/52 (75%), Positives = 42/52 (80%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           SSE YTEV ++VSSFCEYLAPLLHLSK G+STGVVPT      SLMSDGG T
Sbjct: 164 SSETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 215


>ref|XP_006586689.1| PREDICTED: uncharacterized protein LOC100803031 isoform X1 [Glycine
           max]
          Length = 224

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           ++E YTEV A+VSSFCEYLAPLLHLSK G+STGVVPT      SLMSDGG T
Sbjct: 171 TAETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGST 222


>ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycine max]
           gi|571475565|ref|XP_006586690.1| PREDICTED:
           uncharacterized protein LOC100803031 isoform X2 [Glycine
           max] gi|571475567|ref|XP_006586691.1| PREDICTED:
           uncharacterized protein LOC100803031 isoform X3 [Glycine
           max] gi|255638120|gb|ACU19374.1| unknown [Glycine max]
          Length = 217

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           ++E YTEV A+VSSFCEYLAPLLHLSK G+STGVVPT      SLMSDGG T
Sbjct: 164 TAETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGST 215


>gb|ESW26747.1| hypothetical protein PHAVU_003G144800g [Phaseolus vulgaris]
           gi|561028108|gb|ESW26748.1| hypothetical protein
           PHAVU_003G144800g [Phaseolus vulgaris]
          Length = 217

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           ++E YTEV A+VSSFCEYLAPLLHLSK G+STGVVPT      SLMSDGG T
Sbjct: 164 AAETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGT 215


>gb|AFK42853.1| unknown [Medicago truncatula]
          Length = 217

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/52 (75%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           S ENY EV A+V SFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 164 SDENYAEVAAAVQSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 215


>ref|XP_003614099.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355515434|gb|AES97057.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 225

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/52 (75%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           S ENY EV A+V SFCEYLAPLLHLSK GVSTGVVPT      SLMSDGG T
Sbjct: 172 SDENYAEVAAAVQSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGT 223


>ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
           [Vitis vinifera] gi|302142417|emb|CBI19620.3| unnamed
           protein product [Vitis vinifera]
          Length = 216

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/52 (75%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   SSENYTEVVASVSSFCEYLAPLLHLSKSGVSTGVVPTXXXXXXSLMSDGGRT 157
           SSENY+EV A+VSSFCEYLAPLLHLSK G STGVVPT      SLMSD G T
Sbjct: 164 SSENYSEVAAAVSSFCEYLAPLLHLSKPGTSTGVVPTAAAAAASLMSDAGVT 215


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