BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00006409
         (1008 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      294   e-157
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   292   e-156
ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-...   275   e-136
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      277   e-135
ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-...   273   e-134
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   261   e-124
gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus pe...   255   e-124
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   260   e-124
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   260   e-123
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   259   e-123
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]             260   e-123
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   254   e-122
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   250   e-120
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   273   e-119
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   253   e-119
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              273   e-119
ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-...   249   e-118
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-...   249   e-118
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   260   e-118
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   263   e-118

>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  294 bits (753), Expect(2) = e-157
 Identities = 142/158 (89%), Positives = 149/158 (94%)
 Frame = -3

Query: 475 PRSGRPYXXYVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVH 296
           P  G     YVYWWIRQGVSR+LVENSRTLRLPT+LHERLSLIRNAK RLEEKGITPSV+
Sbjct: 311 PSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKARLEEKGITPSVN 370

Query: 295 NIAACLNMSQKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVD 116
           NIAA LNMSQKKVRNATEASSK+YSL+REAFPSLNGLPGETLHSYIADNHLENNPWHGVD
Sbjct: 371 NIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNHLENNPWHGVD 430

Query: 115 VWALKDEVNNLISSTLREREREIVRLYYGLDNECLTWE 2
           VWALKDEVNNLISSTLR+REREI+RLYYGLDNECLTWE
Sbjct: 431 VWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWE 468



 Score =  289 bits (739), Expect(2) = e-157
 Identities = 152/181 (83%), Positives = 160/181 (88%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQWNLS+E  LTASPQHEK  KKMHIT SGTSA         R++ R  SATPTS
Sbjct: 116  KSMLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTS 175

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
            A KPLRSIIGP+LLQNRLKGYVKGVVSEELLTH EVLQLSKKIQVGL++EEQKSRLKERL
Sbjct: 176  AAKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERL 235

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PSDDQLA SLKMSRTDLQSTLIECSLARE LAMSNVRLVMSIAQRYDN+GAEMADLV
Sbjct: 236  GCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLV 295

Query: 468  Q 466
            Q
Sbjct: 296  Q 296


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
           lycopersicum]
          Length = 509

 Score =  292 bits (747), Expect(2) = e-156
 Identities = 141/158 (89%), Positives = 146/158 (92%)
 Frame = -3

Query: 475 PRSGRPYXXYVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVH 296
           P  G     YVYWWIRQGVSR+LVENSRTLRLPTHLHERL LIRNAKMRLEEKGI PSV+
Sbjct: 312 PSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNAKMRLEEKGINPSVN 371

Query: 295 NIAACLNMSQKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVD 116
           NIAA LNMSQKKVRNATEASSKVYSL+RE FPSLNGLPG TLHSYIADNHLENNPWHGVD
Sbjct: 372 NIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYIADNHLENNPWHGVD 431

Query: 115 VWALKDEVNNLISSTLREREREIVRLYYGLDNECLTWE 2
           VWALKDEVNNLISSTLREREREI+RLYYGLD+ECLTWE
Sbjct: 432 VWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWE 469



 Score =  288 bits (738), Expect(2) = e-156
 Identities = 150/181 (82%), Positives = 160/181 (88%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQWNLS E  LTAS Q +KNCKKMHI  SGTSA         R++ ++ SATP S
Sbjct: 117  KSMLEKQWNLSAEETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPIS 176

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
            ATKPLRSI+GPDLLQNRLKGYVKG+VSEELLTHTEVLQLSKKI+VGLHVEEQKSRLKERL
Sbjct: 177  ATKPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERL 236

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PSDDQLA SLKMSRTDLQSTLIECSLARE L+MSNVRLVMSIAQRYDNMGAEMADLV
Sbjct: 237  GCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLV 296

Query: 468  Q 466
            Q
Sbjct: 297  Q 297


>ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Solanum tuberosum] gi|565361192|ref|XP_006347342.1|
           PREDICTED: RNA polymerase sigma factor sigA-like isoform
           X2 [Solanum tuberosum]
          Length = 505

 Score =  275 bits (704), Expect(2) = e-136
 Identities = 130/149 (87%), Positives = 141/149 (94%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LV+NSRTLRLP HLHERLSLIRNAK++L++ GITPS+  IA CLNMS
Sbjct: 317 YVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKLKDNGITPSIEKIAECLNMS 376

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEASSKV+SL+REA+PSLNGLPG TLHSYIADN LENNPWHGVD WALKDEVN
Sbjct: 377 QKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNRLENNPWHGVDGWALKDEVN 436

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
           NLISSTLRERER+IVRLYYGLDNECLTWE
Sbjct: 437 NLISSTLRERERDIVRLYYGLDNECLTWE 465



 Score =  238 bits (606), Expect(2) = e-136
 Identities = 126/182 (69%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKK-MHITGSGTSAXXXXXXXXXRIVGRQISATPT 832
            KSMLEKQWNLS E  L A P +EKNCKK M IT SGTSA         R+   + SA   
Sbjct: 112  KSMLEKQWNLSAEKTLAAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAAN 171

Query: 831  SATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKER 652
            SA+K LRS++GP+L QNRL+GY+KGVV++ELLTH EV+QLSKKI+ GL++EEQK+ LKER
Sbjct: 172  SASKRLRSVVGPELQQNRLRGYMKGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKER 231

Query: 651  LGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADL 472
            LGC+PSDDQLA SLKMS  DL+STL+ECSLARE LAMSNVRLVMSIAQRYD+MG EMADL
Sbjct: 232  LGCEPSDDQLAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADL 291

Query: 471  VQ 466
            +Q
Sbjct: 292  IQ 293


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  277 bits (709), Expect(2) = e-135
 Identities = 133/149 (89%), Positives = 140/149 (93%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLP HLHERLSLIRNAK++L+E GITPS+  IA CLNMS
Sbjct: 314 YVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENGITPSIEKIAECLNMS 373

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEASSKV+SL+REAFPSLNGLPGETLHSYIADN LEN PWHGVD W LKDEVN
Sbjct: 374 QKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENIPWHGVDEWMLKDEVN 433

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
           NLISSTLREREREIVRLYYGLDNECLTWE
Sbjct: 434 NLISSTLREREREIVRLYYGLDNECLTWE 462



 Score =  233 bits (593), Expect(2) = e-135
 Identities = 128/182 (70%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKK-MHITGSGTSAXXXXXXXXXRIVGRQISATPT 832
            KSMLEKQWNLS E A+T    +E NCKK M IT SGTSA         R +  + SAT  
Sbjct: 113  KSMLEKQWNLSAEKAMT----NENNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSD 168

Query: 831  SATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKER 652
            S++K LRS+IGP+LLQNR KGY+ GVV +ELLTHTEV+QLSKKI+ GL++EEQKSRLKER
Sbjct: 169  SSSKRLRSVIGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKER 228

Query: 651  LGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADL 472
            LGC+PSDDQLA SLK+SR DL+STLIECSLARE LAMSNVRLVMSIAQRYD  G EMADL
Sbjct: 229  LGCEPSDDQLAISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADL 288

Query: 471  VQ 466
            +Q
Sbjct: 289  IQ 290


>ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
           lycopersicum]
          Length = 505

 Score =  273 bits (697), Expect(2) = e-134
 Identities = 128/149 (85%), Positives = 140/149 (93%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LV+NSRTLRLP HLHERLSLIRNAK++L++ GITPS+  IA CLNMS
Sbjct: 317 YVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKLKDSGITPSIEKIAECLNMS 376

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEASSKV+SL+REA+PSLNGLPG TLHSYIADN LENNPWHGVD WALKDEVN
Sbjct: 377 QKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNRLENNPWHGVDGWALKDEVN 436

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
           NLISS LRERER+I+RLYYGLDNECLTWE
Sbjct: 437 NLISSILRERERDIIRLYYGLDNECLTWE 465



 Score =  235 bits (599), Expect(2) = e-134
 Identities = 125/182 (68%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKK-MHITGSGTSAXXXXXXXXXRIVGRQISATPT 832
            KSMLEKQWNLS E  L A P +EKNCKK M IT SGTSA         R+   + SA   
Sbjct: 112  KSMLEKQWNLSAEKTLEAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKASAEAN 171

Query: 831  SATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKER 652
            SA+K LRS++GP+L QNRL+GY+ GVV++ELLTH EV+QLSKKI+ GL++EEQK+ LKER
Sbjct: 172  SASKRLRSVVGPELQQNRLRGYMNGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKER 231

Query: 651  LGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADL 472
            LGC+PSDDQLA SLKMS  DL+STL+ECSLARE LAMSNVRLVMSIAQRYD+MG EMADL
Sbjct: 232  LGCEPSDDQLAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADL 291

Query: 471  VQ 466
            +Q
Sbjct: 292  IQ 293


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
           sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Citrus
           sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X3 [Citrus
           sinensis]
          Length = 508

 Score =  261 bits (668), Expect(2) = e-124
 Identities = 126/149 (84%), Positives = 133/149 (89%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLP HLHERL LIRNAK+RLEEKG+TPSV  IA  LNMS
Sbjct: 320 YVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPSVDRIAEYLNMS 379

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA  KV+SL+REAFPSLNGLPGET HSYIADN +ENNPWHGVD WALKDEVN
Sbjct: 380 QKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNRVENNPWHGVDDWALKDEVN 439

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI  TL EREREI+RLYYGLD ECLTWE
Sbjct: 440 KLIIVTLGEREREIIRLYYGLDKECLTWE 468



 Score =  211 bits (538), Expect(2) = e-124
 Identities = 111/181 (61%), Positives = 136/181 (75%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQWNLS E  +      +K  KK+ +T SG SA         +I+ +  S    +
Sbjct: 116  KSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQN 175

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
             +K LRS+I P+L+QN LKGYVKGVVSEELLTH EV++LSKKI+ GL +++ K RLKERL
Sbjct: 176  GSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PS +QLA SL++SR +LQS L+ECSLARE L MSNVRLVMSIAQRYDNMGA+MADLV
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLV 295

Query: 468  Q 466
            Q
Sbjct: 296  Q 296


>gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  255 bits (651), Expect(2) = e-124
 Identities = 121/149 (81%), Positives = 135/149 (90%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLPTHLHERL LIRNAK+RLEEKGITPS+  IA  LNMS
Sbjct: 324 YVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMS 383

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           +KKVRNATEA SKV+SL+R+AFPSLNGLPGET HSYIADN LEN PWHGVD WALK+EV+
Sbjct: 384 KKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRLENIPWHGVDAWALKEEVS 443

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI+  L ERE+EI++LYYGL+NECLTWE
Sbjct: 444 KLINMMLGEREKEIIQLYYGLENECLTWE 472



 Score =  216 bits (551), Expect(2) = e-124
 Identities = 117/182 (64%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXR-IVGRQISATPT 832
            KSMLEKQWNLS E  +      +   KK+ +T SG SA         R    +       
Sbjct: 119  KSMLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHP 178

Query: 831  SATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKER 652
            S  KPLR+I+ P+LLQN +KGYVKGV+SE+LLTHTEV++LSKKI+VGL VEE KSRLKER
Sbjct: 179  STNKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKER 238

Query: 651  LGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADL 472
            LGC+PSD+QLATSL++SR  LQS LIEC LARE LAMSNVRLVMSIAQRYDNMGAEMADL
Sbjct: 239  LGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 298

Query: 471  VQ 466
            +Q
Sbjct: 299  IQ 300


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
           gi|557539599|gb|ESR50643.1| hypothetical protein
           CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  260 bits (665), Expect(2) = e-124
 Identities = 125/149 (83%), Positives = 133/149 (89%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLP HLHERL LIRNAK+RLEEKG+TP+V  IA  LNMS
Sbjct: 320 YVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPAVDRIAEYLNMS 379

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA  KV+SL+REAFPSLNGLPGET HSYIADN +ENNPWHGVD WALKDEVN
Sbjct: 380 QKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNRVENNPWHGVDDWALKDEVN 439

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI  TL EREREI+RLYYGLD ECLTWE
Sbjct: 440 KLIIVTLGEREREIIRLYYGLDKECLTWE 468



 Score =  211 bits (537), Expect(2) = e-124
 Identities = 110/181 (60%), Positives = 136/181 (75%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQWNLS E  +      +K  KK+ +T SG SA         +I+ +  S    +
Sbjct: 116  KSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQN 175

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
             +K LRS+I P+L+QN LKGYVKGVVSEELLTH EV++LSKKI+ GL +++ K RLKERL
Sbjct: 176  GSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PS +QLA SL++SR +LQS L+ECSLARE L MSNVRLVMSIAQRYDNMGA+MADL+
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLI 295

Query: 468  Q 466
            Q
Sbjct: 296  Q 296


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  260 bits (665), Expect(2) = e-123
 Identities = 125/149 (83%), Positives = 136/149 (91%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLP HLHERL LIRNAK+RLEEKG+TPS+  IA  LN+S
Sbjct: 320 YVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNIS 379

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA SKV+SL+REAFPSLNGLPGET HSYIADN LENNPWHGVD WALKDEVN
Sbjct: 380 QKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGVDDWALKDEVN 439

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI+ TL+ERE+EI+RLYYGLDNE LTWE
Sbjct: 440 KLINLTLQEREQEIIRLYYGLDNESLTWE 468



 Score =  210 bits (534), Expect(2) = e-123
 Identities = 112/181 (61%), Positives = 135/181 (74%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQWNLS E   ++     K+ KK+ +T SG SA         + + +       +
Sbjct: 116  KSMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQAN 175

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
              K L+S + P+LLQNRLKGYVKGVVSEELL+H EV++LS+ I+ GL +E+ KSRLKERL
Sbjct: 176  VFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERL 235

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GCDPSD+Q+ATSLK+SR +LQS  I CSLARE LAMSNVRLVMSIAQRYDNMGAEMADLV
Sbjct: 236  GCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV 295

Query: 468  Q 466
            Q
Sbjct: 296  Q 296


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
           gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
           1 family protein [Populus trichocarpa]
          Length = 509

 Score =  259 bits (661), Expect(2) = e-123
 Identities = 122/149 (81%), Positives = 135/149 (90%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LV+NSRTLRLP HLHERL LIRNAK+RLEEKG+TPS+  IA  LNMS
Sbjct: 321 YVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNMS 380

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           Q+KVRNATEA SKV+SL+REAFPSLNGLPGET HSYIADN  ENNPWHGVD WALK+EVN
Sbjct: 381 QRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRPENNPWHGVDEWALKEEVN 440

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI STL+ERE+EI+RLY+GLD ECLTWE
Sbjct: 441 KLIDSTLQEREKEIIRLYHGLDQECLTWE 469



 Score =  211 bits (536), Expect(2) = e-123
 Identities = 113/181 (62%), Positives = 137/181 (75%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQWNLS E   ++    +KN KK+ +T SG SA         +   +    + +S
Sbjct: 117  KSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSS 176

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
              K LRS+  PDLLQNRLKGYVKGVVS+E+L HTEV++LS+ I+ GL  E+ KSRLKERL
Sbjct: 177  DFKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERL 236

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PSD+Q+A SL++SR DLQS LI+CSLARE LAMSNVRLVMSIAQ+YDNMGAEMADLV
Sbjct: 237  GCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLV 296

Query: 468  Q 466
            Q
Sbjct: 297  Q 297


>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  260 bits (664), Expect(2) = e-123
 Identities = 125/149 (83%), Positives = 135/149 (90%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLPTHLHERL LIRNAK+RLEEKGITP++  IA  LNMS
Sbjct: 320 YVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPTIDRIAESLNMS 379

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA SKV+SL+R+AFPSLNGLPGET HSYIADNH+EN PWHGVD WALKDEVN
Sbjct: 380 QKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNHVENIPWHGVDEWALKDEVN 439

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI+ TL EREREI+RLYYGLD E LTWE
Sbjct: 440 RLITITLGEREREIIRLYYGLDKESLTWE 468



 Score =  209 bits (532), Expect(2) = e-123
 Identities = 114/181 (62%), Positives = 138/181 (76%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQW LS E  +       K  KK+ +T SG SA         +I+ +  S    +
Sbjct: 117  KSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPN 176

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
            A K LRS+I P+LLQ+RLKGYVKGVVS+ELL+H EV++LSKKI+ GL +EE + RLKERL
Sbjct: 177  A-KQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERL 235

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PSD+QLATSLK+SR +L+S LIECSLARE LAMSNVRLVMSIAQRYDNMGAEM+DL+
Sbjct: 236  GCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLI 295

Query: 468  Q 466
            Q
Sbjct: 296  Q 296


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
           gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  254 bits (648), Expect(2) = e-122
 Identities = 121/149 (81%), Positives = 134/149 (89%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLPTHLHERL LIRNAK++L+EKGITPS+  IA  LNMS
Sbjct: 320 YVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMS 379

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           +KKV+NATEA SKV+SL+REAFPSLNGLPGET HSYIADN LENNPWHG D W LK EVN
Sbjct: 380 KKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVN 439

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI+ TL +REREI+RLY+GLDNECLTWE
Sbjct: 440 QLINMTLGDREREIIRLYHGLDNECLTWE 468



 Score =  212 bits (540), Expect(2) = e-122
 Identities = 111/181 (61%), Positives = 138/181 (76%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQW+LS E  ++     EK  KK+ +T SG SA         +I  + +      
Sbjct: 116  KSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPK 175

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
             +K LR  I P+LLQNRLKGYVKG++SEELL+H EV++LSKKI+VGL +EE+K+RLK+RL
Sbjct: 176  ISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRL 235

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PS+DQLA SLK+SR +L+S ++E SLARE LAMSNVRLVMSIAQRYDNMGAEMADLV
Sbjct: 236  GCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV 295

Query: 468  Q 466
            Q
Sbjct: 296  Q 296


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  250 bits (638), Expect(2) = e-120
 Identities = 121/149 (81%), Positives = 132/149 (88%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLP HLHERLSLIRNAK RLEE+GITP++  IA  LNMS
Sbjct: 315 YVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFRLEERGITPTIDRIAKYLNMS 374

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA SK+ SL+REAFPSLNGL GET HSYIADN +EN PW+GVD WALKDEVN
Sbjct: 375 QKKVRNATEAISKIISLDREAFPSLNGLQGETHHSYIADNRVENIPWNGVDEWALKDEVN 434

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI+ TL EREREI+RLYYGL+ ECLTWE
Sbjct: 435 RLINVTLVEREREIIRLYYGLEKECLTWE 463



 Score =  210 bits (535), Expect(2) = e-120
 Identities = 113/182 (62%), Positives = 139/182 (76%), Gaps = 1/182 (0%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEH-ALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPT 832
            KSMLEKQWNLS E   LT +    K C+K+ +T SG SA             ++ +A  T
Sbjct: 116  KSMLEKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNT------KRKTAIKT 169

Query: 831  SATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKER 652
                 L+S I P+LLQ+RLKGYVKG+VSEELL+H EV+ LS+KI+VGL +EE KSRLKE+
Sbjct: 170  CGAMQLKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEK 229

Query: 651  LGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADL 472
            LGC+PSDDQ+ATSLK+SRT+L++ +IECSLARE LAMSNVRLVMSIAQ+YDN+GAEM DL
Sbjct: 230  LGCEPSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDL 289

Query: 471  VQ 466
            VQ
Sbjct: 290  VQ 291


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
           vinifera]
          Length = 497

 Score =  273 bits (698), Expect(2) = e-119
 Identities = 130/149 (87%), Positives = 140/149 (93%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLP+HLHERLSLIRNAK+RLEEKGITPS+  IA CLNMS
Sbjct: 309 YVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSIDRIAECLNMS 368

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA SKV+SL+REAFPSLNGLPGETLHSYIAD  LENNPWHGVD WALKDEVN
Sbjct: 369 QKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPWHGVDEWALKDEVN 428

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI++TL ERER+I+RLYYGLDNECLTWE
Sbjct: 429 KLINTTLGERERDIIRLYYGLDNECLTWE 457



 Score =  184 bits (468), Expect(2) = e-119
 Identities = 108/184 (58%), Positives = 132/184 (71%), Gaps = 3/184 (1%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQH---EKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISAT 838
            KSMLEKQWNLS E       +    +   K+  +T SGTSA          I GR+    
Sbjct: 112  KSMLEKQWNLSFEEEEEEEEEDMGKKARQKRREVTCSGTSARQRR------ISGRKRVMN 165

Query: 837  PTSATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLK 658
              S ++ +R+ +G   ++NRLKGYVKGVVSEELLTH +V+ LS KI+ GL +E+ KSRLK
Sbjct: 166  EKSKSR-VRAALG---VENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLK 221

Query: 657  ERLGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMA 478
            ER+G +P+D+Q+A SL+MSR +LQS LIECSLARE LAMSNVRLVMSIAQRYDNMGAEMA
Sbjct: 222  ERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA 281

Query: 477  DLVQ 466
            DLVQ
Sbjct: 282  DLVQ 285


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
           subsp. vesca]
          Length = 511

 Score =  253 bits (646), Expect(2) = e-119
 Identities = 123/149 (82%), Positives = 134/149 (89%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLPTHLHERL LIRNAK+RLEEKGITPS+ +IA  LNMS
Sbjct: 323 YVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLEEKGITPSIDSIAESLNMS 382

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           +KKVRNATEA SKV+SL+R+AFPSLNGLPGET HSYIADN  EN PWHG+D  ALKDEVN
Sbjct: 383 KKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRHENIPWHGLDELALKDEVN 442

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI+  L EREREI+RLYYGLDNECLTWE
Sbjct: 443 KLINLMLGEREREIIRLYYGLDNECLTWE 471



 Score =  202 bits (515), Expect(2) = e-119
 Identities = 110/181 (60%), Positives = 131/181 (72%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KS+LEKQWNLS E  L+     +    K+ +T SG SA         +   +  S    S
Sbjct: 122  KSLLEKQWNLSFEKKLSTRKITDN---KIPVTCSGVSARQRRMSTKRKAFSKNTSELQPS 178

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
              K  R+ I P LLQNR  GYVKGV S+ LLTHTEV++LSKKI++GL VEE KSRLKE+L
Sbjct: 179  TNKYCRATISPSLLQNRTSGYVKGVTSDHLLTHTEVVRLSKKIKIGLSVEEHKSRLKEKL 238

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PS +QLATSL++SRT+LQS LI+CSLARE L MSNVRLVMSIAQRYDNMGAEMADL+
Sbjct: 239  GCEPSVEQLATSLRISRTELQSKLIQCSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLI 298

Query: 468  Q 466
            Q
Sbjct: 299  Q 299


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  273 bits (698), Expect(2) = e-119
 Identities = 130/149 (87%), Positives = 140/149 (93%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVENSRTLRLP+HLHERLSLIRNAK+RLEEKGITPS+  IA CLNMS
Sbjct: 367 YVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSIDRIAECLNMS 426

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA SKV+SL+REAFPSLNGLPGETLHSYIAD  LENNPWHGVD WALKDEVN
Sbjct: 427 QKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPWHGVDEWALKDEVN 486

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI++TL ERER+I+RLYYGLDNECLTWE
Sbjct: 487 KLINTTLGERERDIIRLYYGLDNECLTWE 515



 Score =  182 bits (462), Expect(2) = e-119
 Identities = 107/181 (59%), Positives = 130/181 (71%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQWNLS +             K+  +T SGTSA          I GR+      S
Sbjct: 183  KSMLEKQWNLSFK----------ARQKRREVTCSGTSARQRR------ISGRKRVMNEKS 226

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
             ++ +R+ +G   ++NRLKGYVKGVVSEELLTH +V+ LS KI+ GL +E+ KSRLKER+
Sbjct: 227  KSR-VRAALG---VENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERI 282

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            G +P+D+Q+A SL+MSR +LQS LIECSLARE LAMSNVRLVMSIAQRYDNMGAEMADLV
Sbjct: 283  GSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV 342

Query: 468  Q 466
            Q
Sbjct: 343  Q 343


>ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
           arietinum] gi|502126940|ref|XP_004499500.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Cicer
           arietinum]
          Length = 514

 Score =  249 bits (635), Expect(2) = e-118
 Identities = 118/149 (79%), Positives = 134/149 (89%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVS++LVENSRTLRLPTHLHERLSLIRNA+ RLEE+GITP++  IA CLNMS
Sbjct: 326 YVYWWIRQGVSKALVENSRTLRLPTHLHERLSLIRNAEYRLEERGITPTIDRIAKCLNMS 385

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA +KV+S++REAFPSLNGLPG+T H++IAD   EN PW+GVD WALK+EVN
Sbjct: 386 QKKVRNATEAINKVFSIDREAFPSLNGLPGDTHHNFIADKRHENIPWNGVDEWALKEEVN 445

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI+ TL EREREIVRLYYGLD ECLTWE
Sbjct: 446 RLINVTLVEREREIVRLYYGLDKECLTWE 474



 Score =  204 bits (520), Expect(2) = e-118
 Identities = 114/182 (62%), Positives = 140/182 (76%), Gaps = 1/182 (0%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEH-ALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPT 832
            KSMLEKQW LS E   +T +    KN +K+ +T SG SA             R+IS+   
Sbjct: 127  KSMLEKQWCLSFEREVVTENSMRVKNRRKVTVTCSGVSARQRRMNSK-----RKISSKTG 181

Query: 831  SATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKER 652
            SA + +RS I P+LLQNRLKGYVKGVVSEELL+H +V++LS+KI+ GL ++E KSRLKER
Sbjct: 182  SAVQ-MRSAITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGLSLDEHKSRLKER 240

Query: 651  LGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADL 472
            LGC+PSDDQ+ATSLK+S+ +L++ +IECSLARE L MSNVRLVMSIAQRYDNMGAEMADL
Sbjct: 241  LGCEPSDDQVATSLKISQAELRAKIIECSLAREKLTMSNVRLVMSIAQRYDNMGAEMADL 300

Query: 471  VQ 466
            VQ
Sbjct: 301  VQ 302


>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
           arietinum]
          Length = 513

 Score =  249 bits (635), Expect(2) = e-118
 Identities = 118/149 (79%), Positives = 134/149 (89%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVS++LVENSRTLRLPTHLHERLSLIRNA+ RLEE+GITP++  IA CLNMS
Sbjct: 325 YVYWWIRQGVSKALVENSRTLRLPTHLHERLSLIRNAEYRLEERGITPTIDRIAKCLNMS 384

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA +KV+S++REAFPSLNGLPG+T H++IAD   EN PW+GVD WALK+EVN
Sbjct: 385 QKKVRNATEAINKVFSIDREAFPSLNGLPGDTHHNFIADKRHENIPWNGVDEWALKEEVN 444

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI+ TL EREREIVRLYYGLD ECLTWE
Sbjct: 445 RLINVTLVEREREIVRLYYGLDKECLTWE 473



 Score =  204 bits (520), Expect(2) = e-118
 Identities = 114/182 (62%), Positives = 140/182 (76%), Gaps = 1/182 (0%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEH-ALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPT 832
            KSMLEKQW LS E   +T +    KN +K+ +T SG SA             R+IS+   
Sbjct: 126  KSMLEKQWCLSFEREVVTENSMRVKNRRKVTVTCSGVSARQRRMNSK-----RKISSKTG 180

Query: 831  SATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKER 652
            SA + +RS I P+LLQNRLKGYVKGVVSEELL+H +V++LS+KI+ GL ++E KSRLKER
Sbjct: 181  SAVQ-MRSAITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGLSLDEHKSRLKER 239

Query: 651  LGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADL 472
            LGC+PSDDQ+ATSLK+S+ +L++ +IECSLARE L MSNVRLVMSIAQRYDNMGAEMADL
Sbjct: 240  LGCEPSDDQVATSLKISQAELRAKIIECSLAREKLTMSNVRLVMSIAQRYDNMGAEMADL 299

Query: 471  VQ 466
            VQ
Sbjct: 300  VQ 301


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
           gi|550325184|gb|EEE95160.2| hypothetical protein
           POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  260 bits (664), Expect(2) = e-118
 Identities = 123/149 (82%), Positives = 134/149 (89%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LVEN RTLRLP HLHERL LIRNAK+RLEEKG+TPS+  IA  LNMS
Sbjct: 311 YVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNMS 370

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           Q+KVRNATEA SKV+SL+REAFPSLNGLPGET HSYIADN LENNPWHGVD WALK+EVN
Sbjct: 371 QRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGVDEWALKEEVN 430

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LI S L+EREREI+RLY+GLD ECLTWE
Sbjct: 431 KLIDSALQEREREIIRLYHGLDKECLTWE 459



 Score =  192 bits (489), Expect(2) = e-118
 Identities = 108/181 (59%), Positives = 130/181 (71%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNCKKMHITGSGTSAXXXXXXXXXRIVGRQISATPTS 829
            KSMLEKQWNLS E   ++  + +K+ KK+ +T SG SA             R  +     
Sbjct: 117  KSMLEKQWNLSFESINSSDSKIKKSNKKIPVTCSGVSARQR----------RLNNKRKNQ 166

Query: 828  ATKPLRSIIGPDLLQNRLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRLKERL 649
                  S I PDLL NRLKGYVKGVVS+E+L HTEV++LS+ I+ GL +E+ KS LKERL
Sbjct: 167  NQSKFMSDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERL 226

Query: 648  GCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEMADLV 469
            GC+PSD+QLA SL++SR DLQS LI+CSLARE LAMSNVRLVMSIAQ+ DNMGAEMADLV
Sbjct: 227  GCEPSDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLV 286

Query: 468  Q 466
            Q
Sbjct: 287  Q 287


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
           gi|557097090|gb|ESQ37598.1| hypothetical protein
           EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  263 bits (671), Expect(2) = e-118
 Identities = 124/149 (83%), Positives = 136/149 (91%)
 Frame = -3

Query: 448 YVYWWIRQGVSRSLVENSRTLRLPTHLHERLSLIRNAKMRLEEKGITPSVHNIAACLNMS 269
           YVYWWIRQGVSR+LV+NSRTLRLPTHLHERL LIRNAK+RL+EKGITPS+  IA  LNMS
Sbjct: 331 YVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMS 390

Query: 268 QKKVRNATEASSKVYSLEREAFPSLNGLPGETLHSYIADNHLENNPWHGVDVWALKDEVN 89
           QKKVRNATEA SK++SL+R+AFPSLNGLPGET HSYIADN LENNPWHG D WALKDEV+
Sbjct: 391 QKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNRLENNPWHGYDEWALKDEVS 450

Query: 88  NLISSTLREREREIVRLYYGLDNECLTWE 2
            LIS+TL EREREI+RLYYGLD ECLTWE
Sbjct: 451 KLISATLGEREREIIRLYYGLDKECLTWE 479



 Score =  189 bits (481), Expect(2) = e-118
 Identities = 106/185 (57%), Positives = 136/185 (73%), Gaps = 4/185 (2%)
 Frame = -1

Query: 1008 KSMLEKQWNLSVEHALTASPQHEKNC--KKMHITGSGTSAXXXXXXXXXRIVGRQISA-T 838
            KSMLEKQWNLS E A T+    +K    KK  +T SG SA         +     +   +
Sbjct: 123  KSMLEKQWNLSFEKAATSESPSKKRMTRKKNPVTCSGISARQRRIGAKKKTNMSHVKVVS 182

Query: 837  PTSATKPLRSIIGPDLLQN-RLKGYVKGVVSEELLTHTEVLQLSKKIQVGLHVEEQKSRL 661
              S+ K ++S+I  +L QN R+KGYV+GVVSE++L+H EV++LSKKI+ GL +++ KSRL
Sbjct: 183  EVSSGKQVKSVINSELFQNNRVKGYVRGVVSEDVLSHAEVVRLSKKIKSGLRLDDHKSRL 242

Query: 660  KERLGCDPSDDQLATSLKMSRTDLQSTLIECSLARESLAMSNVRLVMSIAQRYDNMGAEM 481
            K+RLGC+PSD+QLA SLK+SR +LQ+ L+EC LARE LAMSNVRLVMSIAQRYDNMGAEM
Sbjct: 243  KDRLGCEPSDEQLAISLKISRGELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNMGAEM 302

Query: 480  ADLVQ 466
            +DLVQ
Sbjct: 303  SDLVQ 307